Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:02:28 (28687): wrapper (7.7.26015): starting
08:02:28 (28687): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 08:02:28] Arguments: --nthreads 8
[2025-10-12 08:02:28] Threads: 8
[2025-10-12 08:02:28] Checking for CVMFS
[2025-10-12 08:02:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 08:02:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 08:02:30] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 08:02:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 08:02:31] 2.13.2.0 136315 22734 226420 151619 3 206 25240772 40960000 18867 16776704 0 58378521 99.703 50828954 32244 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 08:02:31] CVMFS is ok
[2025-10-12 08:02:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 08:02:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 08:02:31] Further information can be found at the LHC@home message board.
[2025-10-12 08:02:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 08:02:31] Checking for apptainer binary...
[2025-10-12 08:02:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 08:02:31] Running /usr/bin/apptainer --version
[2025-10-12 08:02:32] apptainer version 1.4.3-1.el9
[2025-10-12 08:02:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 08:02:53] c6-8-12-2.aglt2.org
[2025-10-12 08:02:53] apptainer works
[2025-10-12 08:02:53] Set ATHENA_PROC_NUMBER=8
[2025-10-12 08:02:53] Set ATHENA_CORE_NUMBER=8
[2025-10-12 08:02:53] Starting ATLAS job with PandaID=6838990956
[2025-10-12 08:02:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 13:28:03]  *** The last 200 lines of the pilot log: ***
[2025-10-12 13:28:03] 2025-10-12 17:26:52,460 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 13:28:03] 2025-10-12 17:26:52,482 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 13:28:03] 2025-10-12 17:26:52,482 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 13:28:03] 2025-10-12 17:26:52,563 | INFO     | fitting pss+swap vs Time
[2025-10-12 13:28:03] 2025-10-12 17:26:52,564 | INFO     | sum of square deviations: 9599575705.914053
[2025-10-12 13:28:03] 2025-10-12 17:26:52,566 | INFO     | sum of deviations: 34349310895.66239
[2025-10-12 13:28:03] 2025-10-12 17:26:52,566 | INFO     | mean x: 1760280378.1878982
[2025-10-12 13:28:03] 2025-10-12 17:26:52,566 | INFO     | mean y: 2498868.700636943
[2025-10-12 13:28:03] 2025-10-12 17:26:52,566 | INFO     | -- intersect: -6296156387.141525
[2025-10-12 13:28:03] 2025-10-12 17:26:52,566 | INFO     | intersect: -6296156387.141525
[2025-10-12 13:28:03] 2025-10-12 17:26:52,589 | INFO     | chi2: 2.8255442362805643
[2025-10-12 13:28:03] 2025-10-12 17:26:52,590 | INFO     | sum of square deviations: 9148273883.792856
[2025-10-12 13:28:03] 2025-10-12 17:26:52,591 | INFO     | sum of deviations: 55318304523.909386
[2025-10-12 13:28:03] 2025-10-12 17:26:52,592 | INFO     | mean x: 1760280225.6925566
[2025-10-12 13:28:03] 2025-10-12 17:26:52,592 | INFO     | mean y: 2505860.1779935276
[2025-10-12 13:28:03] 2025-10-12 17:26:52,592 | INFO     | -- intersect: -10641657050.68416
[2025-10-12 13:28:03] 2025-10-12 17:26:52,592 | INFO     | intersect: -10641657050.68416
[2025-10-12 13:28:03] 2025-10-12 17:26:52,592 | INFO     | chi2: 2.008072741738165
[2025-10-12 13:28:03] 2025-10-12 17:26:52,592 | INFO     | current chi2=2.008072741738165 (change=28.931470406511377 %)
[2025-10-12 13:28:03] 2025-10-12 17:26:52,631 | INFO     | sum of square deviations: 8711363516.759804
[2025-10-12 13:28:03] 2025-10-12 17:26:52,633 | INFO     | sum of deviations: 54230519374.56584
[2025-10-12 13:28:03] 2025-10-12 17:26:52,633 | INFO     | mean x: 1760280073.2006578
[2025-10-12 13:28:03] 2025-10-12 17:26:52,633 | INFO     | mean y: 2505480.1710526315
[2025-10-12 13:28:03] 2025-10-12 17:26:52,633 | INFO     | -- intersect: -10955698988.132113
[2025-10-12 13:28:03] 2025-10-12 17:26:52,633 | INFO     | intersect: -10955698988.132113
[2025-10-12 13:28:03] 2025-10-12 17:26:52,634 | INFO     | chi2: 2.0088299678434294
[2025-10-12 13:28:03] 2025-10-12 17:26:52,634 | INFO     | current chi2=2.0088299678434294 (change=-0.03770909736113253 %)
[2025-10-12 13:28:03] 2025-10-12 17:26:52,634 | INFO     | right removable region: 303
[2025-10-12 13:28:03] 2025-10-12 17:26:52,634 | INFO     | sum of square deviations: 9148218373.792852
[2025-10-12 13:28:03] 2025-10-12 17:26:52,653 | INFO     | sum of deviations: -28590408240.3398
[2025-10-12 13:28:03] 2025-10-12 17:26:52,654 | INFO     | mean x: 1760280530.6925566
[2025-10-12 13:28:03] 2025-10-12 17:26:52,654 | INFO     | mean y: 2520023.4174757283
[2025-10-12 13:28:03] 2025-10-12 17:26:52,654 | INFO     | -- intersect: 5503824969.765903
[2025-10-12 13:28:03] 2025-10-12 17:26:52,654 | INFO     | intersect: 5503824969.765903
[2025-10-12 13:28:03] 2025-10-12 17:26:52,654 | INFO     | chi2: 0.9231330674273767
[2025-10-12 13:28:03] 2025-10-12 17:26:52,662 | INFO     | current chi2=0.9231330674273767 (change=67.32901734206955 %)
[2025-10-12 13:28:03] 2025-10-12 17:26:52,663 | INFO     | sum of square deviations: 8711271828.934208
[2025-10-12 13:28:03] 2025-10-12 17:26:52,665 | INFO     | sum of deviations: -40221434145.124985
[2025-10-12 13:28:03] 2025-10-12 17:26:52,665 | INFO     | mean x: 1760280683.1907895
[2025-10-12 13:28:03] 2025-10-12 17:26:52,665 | INFO     | mean y: 2524084.8125
[2025-10-12 13:28:03] 2025-10-12 17:26:52,665 | INFO     | -- intersect: 8130041508.930833
[2025-10-12 13:28:03] 2025-10-12 17:26:52,665 | INFO     | intersect: 8130041508.930833
[2025-10-12 13:28:03] 2025-10-12 17:26:52,719 | INFO     | chi2: 0.8637396391023845
[2025-10-12 13:28:03] 2025-10-12 17:26:52,719 | INFO     | current chi2=0.8637396391023845 (change=6.433896739341392 %)
[2025-10-12 13:28:03] 2025-10-12 17:26:52,720 | INFO     | left removable region: 20
[2025-10-12 13:28:03] 2025-10-12 17:26:52,720 | INFO     | sum of square deviations: 7027940093.0106325
[2025-10-12 13:28:03] 2025-10-12 17:26:52,721 | INFO     | sum of deviations: -13688335351.445229
[2025-10-12 13:28:03] 2025-10-12 17:26:52,722 | INFO     | mean x: 1760280652.6855123
[2025-10-12 13:28:03] 2025-10-12 17:26:52,722 | INFO     | mean y: 2529722.2084805653
[2025-10-12 13:28:03] 2025-10-12 17:26:52,722 | INFO     | -- intersect: 3431032465.2217913
[2025-10-12 13:28:03] 2025-10-12 17:26:52,722 | INFO     | intersect: 3431032465.2217913
[2025-10-12 13:28:03] 2025-10-12 17:26:52,722 | INFO     | chi2: 0.023177320210239123
[2025-10-12 13:28:03] 2025-10-12 17:26:52,722 | INFO     | -- intersect: 3431032465.2217913
[2025-10-12 13:28:03] 2025-10-12 17:26:52,722 | INFO     | current memory leak: -1.95 B/s (using 283 data points, chi2=0.02)
[2025-10-12 13:28:03] 2025-10-12 17:26:52,775 | INFO     | could have reported an average CPU frequency of 2809 MHz (14 samples)
[2025-10-12 13:28:03] 2025-10-12 17:26:52,776 | INFO     | ..............................
[2025-10-12 13:28:03] 2025-10-12 17:26:52,776 | INFO     | . Timing measurements:
[2025-10-12 13:28:03] 2025-10-12 17:26:52,776 | INFO     | . get job = 1 s
[2025-10-12 13:28:03] 2025-10-12 17:26:52,776 | INFO     | . initial setup = 5 s
[2025-10-12 13:28:03] 2025-10-12 17:26:52,776 | INFO     | . payload setup = 49 s
[2025-10-12 13:28:03] 2025-10-12 17:26:52,776 | INFO     | . stage-in = 0 s
[2025-10-12 13:28:03] 2025-10-12 17:26:52,776 | INFO     | . payload execution = 19169 s
[2025-10-12 13:28:03] 2025-10-12 17:26:52,776 | INFO     | . stage-out = 8 s
[2025-10-12 13:28:03] 2025-10-12 17:26:52,776 | INFO     | . log creation = 1 s
[2025-10-12 13:28:03] 2025-10-12 17:26:52,776 | INFO     | ..............................
[2025-10-12 13:28:03] 2025-10-12 17:26:53,752 | INFO     | 
[2025-10-12 13:28:03] 2025-10-12 17:26:53,753 | INFO     | job summary report
[2025-10-12 13:28:03] 2025-10-12 17:26:53,753 | INFO     | --------------------------------------------------
[2025-10-12 13:28:03] 2025-10-12 17:26:53,753 | INFO     | PanDA job id: 6838990956
[2025-10-12 13:28:03] 2025-10-12 17:26:53,753 | INFO     | task id: 46676269
[2025-10-12 13:28:03] 2025-10-12 17:26:53,753 | INFO     | errors: (none)
[2025-10-12 13:28:03] 2025-10-12 17:26:53,753 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 13:28:03] 2025-10-12 17:26:53,753 | INFO     | pilot state: finished 
[2025-10-12 13:28:03] 2025-10-12 17:26:53,753 | INFO     | transexitcode: 0
[2025-10-12 13:28:03] 2025-10-12 17:26:53,753 | INFO     | exeerrorcode: 0
[2025-10-12 13:28:03] 2025-10-12 17:26:53,753 | INFO     | exeerrordiag: 
[2025-10-12 13:28:03] 2025-10-12 17:26:53,753 | INFO     | exitcode: 0
[2025-10-12 13:28:03] 2025-10-12 17:26:53,754 | INFO     | exitmsg: OK
[2025-10-12 13:28:03] 2025-10-12 17:26:53,754 | INFO     | cpuconsumptiontime: 45064 s
[2025-10-12 13:28:03] 2025-10-12 17:26:53,754 | INFO     | nevents: 400
[2025-10-12 13:28:03] 2025-10-12 17:26:53,754 | INFO     | neventsw: 0
[2025-10-12 13:28:03] 2025-10-12 17:26:53,754 | INFO     | pid: 44711
[2025-10-12 13:28:03] 2025-10-12 17:26:53,754 | INFO     | pgrp: 44711
[2025-10-12 13:28:03] 2025-10-12 17:26:53,754 | INFO     | corecount: 8
[2025-10-12 13:28:03] 2025-10-12 17:26:53,754 | INFO     | event service: False
[2025-10-12 13:28:03] 2025-10-12 17:26:53,754 | INFO     | sizes: {0: 2348686, 1: 2348885, 12: 2348885, 23: 2348913, 34: 2348941, 43: 2349231, 45: 2349387, 19224: 2381904, 19234: 2390902, 19236: 2390958, 19268: 2391152}
[2025-10-12 13:28:03] 2025-10-12 17:26:53,754 | INFO     | --------------------------------------------------
[2025-10-12 13:28:03] 2025-10-12 17:26:53,754 | INFO     | 
[2025-10-12 13:28:03] 2025-10-12 17:26:53,755 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-12 13:28:03] 2025-10-12 17:26:53,872 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 13:28:03] 2025-10-12 17:26:53,873 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 13:28:03] 2025-10-12 17:26:53,873 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 13:28:03] 2025-10-12 17:26:53,873 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 13:28:03] 2025-10-12 17:26:53,873 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 13:28:03] 2025-10-12 17:26:53,873 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 13:28:03] 2025-10-12 17:26:53,873 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 13:28:03] 2025-10-12 17:26:53,873 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 13:28:03] 2025-10-12 17:26:53,873 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 13:28:03] 2025-10-12 17:26:53,873 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 13:28:03] 2025-10-12 17:26:53,873 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 13:28:03] 2025-10-12 17:26:53,874 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 13:28:03] 2025-10-12 17:26:53,874 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 13:28:03] 2025-10-12 17:26:53,874 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 13:28:03] 2025-10-12 17:26:53,874 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 13:28:03] 2025-10-12 17:26:53,874 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 13:28:03] 2025-10-12 17:26:53,874 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 13:28:03] 2025-10-12 17:26:53,874 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 13:28:03] 2025-10-12 17:26:53,874 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 13:28:03] 2025-10-12 17:26:53,874 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 13:28:03] 2025-10-12 17:26:53,874 | INFO     | job 6838990956 has completed (purged errors)
[2025-10-12 13:28:03] 2025-10-12 17:26:53,874 | INFO     | overall cleanup function is called
[2025-10-12 13:28:03] 2025-10-12 17:26:54,896 | INFO     | --- collectZombieJob: --- 10, [44711]
[2025-10-12 13:28:03] 2025-10-12 17:26:54,896 | INFO     | zombie collector waiting for pid 44711
[2025-10-12 13:28:03] 2025-10-12 17:26:54,896 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 13:28:03] 2025-10-12 17:26:54,896 | INFO     | collected zombie processes
[2025-10-12 13:28:03] 2025-10-12 17:26:54,896 | INFO     | will attempt to kill all subprocesses of pid=44711
[2025-10-12 13:28:03] 2025-10-12 17:26:58,171 | INFO     | process IDs to be killed: [44711] (in reverse order)
[2025-10-12 13:28:03] 2025-10-12 17:26:59,405 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 13:28:03] 2025-10-12 17:26:59,405 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 13:28:03] 2025-10-12 17:26:59,511 | INFO     | did not find any defunct processes belonging to 44711
[2025-10-12 13:28:03] 2025-10-12 17:26:59,782 | INFO     | did not find any defunct processes belonging to 44711
[2025-10-12 13:28:03] 2025-10-12 17:26:59,782 | INFO     | ready for new job
[2025-10-12 13:28:03] 2025-10-12 17:26:59,782 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 13:28:03] 2025-10-12 17:26:59,821 | INFO     | ***************************************
[2025-10-12 13:28:03] 2025-10-12 17:26:59,822 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 13:28:03] 2025-10-12 17:26:59,822 | INFO     | ***************************************
[2025-10-12 13:28:03] 2025-10-12 17:26:59,822 | INFO     | 
[2025-10-12 13:28:03] 2025-10-12 17:26:59,853 | INFO     | architecture information:
[2025-10-12 13:28:03] 2025-10-12 17:26:59,883 | INFO     | executing command: cat /etc/os-release
[2025-10-12 13:28:03] 2025-10-12 17:27:00,064 | INFO     | cat /etc/os-release:
[2025-10-12 13:28:03] NAME="CentOS Linux"
[2025-10-12 13:28:03] VERSION="7 (Core)"
[2025-10-12 13:28:03] ID="centos"
[2025-10-12 13:28:03] ID_LIKE="rhel fedora"
[2025-10-12 13:28:03] VERSION_ID="7"
[2025-10-12 13:28:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 13:28:03] ANSI_COLOR="0;31"
[2025-10-12 13:28:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 13:28:03] HOME_URL="https://www.centos.org/"
[2025-10-12 13:28:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 13:28:03] 
[2025-10-12 13:28:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 13:28:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 13:28:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 13:28:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 13:28:03] 
[2025-10-12 13:28:03] 2025-10-12 17:27:00,064 | INFO     | ***************************************
[2025-10-12 13:28:03] 2025-10-12 17:27:00,568 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-12 13:28:03] 2025-10-12 17:27:00,776 | INFO     | sufficient remaining disk space (74373398528 B)
[2025-10-12 13:28:03] 2025-10-12 17:27:00,777 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 13:28:03] 2025-10-12 17:27:00,777 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 13:28:03] 2025-10-12 17:27:00,777 | INFO     | update_server=False
[2025-10-12 13:28:03] 2025-10-12 17:27:00,777 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 13:28:03] 2025-10-12 17:27:00,789 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 13:28:03] 2025-10-12 17:27:00,789 | INFO     | aborting loop
[2025-10-12 13:28:03] 2025-10-12 17:27:00,795 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 13:28:03] 2025-10-12 17:27:01,155 | INFO     | all data control threads have been joined
[2025-10-12 13:28:03] 2025-10-12 17:27:01,378 | INFO     | all payload control threads have been joined
[2025-10-12 13:28:03] 2025-10-12 17:27:01,720 | INFO     | all job control threads have been joined
[2025-10-12 13:28:03] 2025-10-12 17:27:01,816 | INFO     | [job] retrieve thread has finished
[2025-10-12 13:28:03] 2025-10-12 17:27:01,816 | INFO     | [job] job monitor thread has finished
[2025-10-12 13:28:03] 2025-10-12 17:27:01,857 | INFO     | [payload] validate_post thread has finished
[2025-10-12 13:28:03] 2025-10-12 17:27:02,161 | INFO     | [data] control thread has finished
[2025-10-12 13:28:03] 2025-10-12 17:27:02,191 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 13:28:03] 2025-10-12 17:27:02,364 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 13:28:03] 2025-10-12 17:27:02,369 | INFO     | [data] copytool_in thread has finished
[2025-10-12 13:28:03] 2025-10-12 17:27:02,374 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 13:28:03] 2025-10-12 17:27:02,375 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 13:28:03] 2025-10-12 17:27:02,384 | INFO     | [payload] control thread has finished
[2025-10-12 13:28:03] 2025-10-12 17:27:02,468 | INFO     | [payload] failed_post thread has finished
[2025-10-12 13:28:03] 2025-10-12 17:27:02,691 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 13:28:03] 2025-10-12 17:27:02,763 | INFO     | [job] control thread has finished
[2025-10-12 13:28:03] 2025-10-12 17:27:02,841 | INFO     | [data] copytool_out thread has finished
[2025-10-12 13:28:03] 2025-10-12 17:27:03,197 | INFO     | [job] validate thread has finished
[2025-10-12 13:28:03] 2025-10-12 17:27:03,697 | INFO     | [job] queue monitor thread has finished
[2025-10-12 13:28:03] 2025-10-12 17:27:03,828 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 13:28:03] 2025-10-12 17:27:07,838 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 13:28:03] 2025-10-12 17:27:28,704 | INFO     | PID=36455 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 13:28:03] 2025-10-12 17:27:28,705 | INFO     | .. there are 24 such processes running
[2025-10-12 13:28:03] 2025-10-12 17:27:28,731 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 13:28:03] 2025-10-12 17:27:28,731 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 13:28:03] 2025-10-12 17:27:28,731 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 13:28:03] 2025-10-12 17:27:54,799 | INFO     | [monitor] cgroup control has ended
[2025-10-12 13:28:03] 2025-10-12 17:27:55,247 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140339807696704)>', '<ExcThread(monitor, started 140339306284800)>']
[2025-10-12 13:28:03] 2025-10-12 17:27:56,229 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 13:28:03] 2025-10-12 17:27:56,229 | INFO     | [monitor] control thread has ended
[2025-10-12 13:28:03] 2025-10-12 17:28:00,273 | INFO     | all workflow threads have been joined
[2025-10-12 13:28:03] 2025-10-12 17:28:00,273 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 13:28:03] 2025-10-12 17:28:00,273 | INFO     | traces error code: 0
[2025-10-12 13:28:03] 2025-10-12 17:28:00,274 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 13:28:03] 2025-10-12 17:28:02,598 [wrapper] ==== pilot stdout END ====
[2025-10-12 13:28:03] 2025-10-12 17:28:02,601 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 13:28:03] 2025-10-12 17:28:02,604 [wrapper] pilotpid: 36455
[2025-10-12 13:28:03] 2025-10-12 17:28:02,607 [wrapper] Pilot exit status: 0
[2025-10-12 13:28:03] 2025-10-12 17:28:02,646 [wrapper] pandaids: 6838990956
[2025-10-12 13:28:03] 2025-10-12 17:28:02,789 [wrapper] cleanup supervisor_pilot  806717 36456
[2025-10-12 13:28:03] 2025-10-12 17:28:02,794 [wrapper] Test setup, not cleaning
[2025-10-12 13:28:03] 2025-10-12 17:28:02,798 [wrapper] apfmon messages muted
[2025-10-12 13:28:03] 2025-10-12 17:28:02,802 [wrapper] ==== wrapper stdout END ====
[2025-10-12 13:28:03] 2025-10-12 17:28:02,807 [wrapper] ==== wrapper stderr END ====
[2025-10-12 13:28:03]  *** Error codes and diagnostics ***
[2025-10-12 13:28:03]     "exeErrorCode": 0,
[2025-10-12 13:28:03]     "exeErrorDiag": "",
[2025-10-12 13:28:03]     "pilotErrorCode": 0,
[2025-10-12 13:28:03]     "pilotErrorDiag": "",
[2025-10-12 13:28:03]  *** Listing of results directory ***
[2025-10-12 13:28:03] total 419432
[2025-10-12 13:28:03] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 18:51 pilot3.tar.gz
[2025-10-12 13:28:03] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 19:01 queuedata.json
[2025-10-12 13:28:03] -rwx------. 1 boincer umatlas     36292 Oct 11 19:01 runpilot2-wrapper.sh
[2025-10-12 13:28:03] -rw-r--r--. 1 boincer umatlas       100 Oct 12 08:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 13:28:03] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 08:02 run_atlas
[2025-10-12 13:28:03] -rw-r--r--. 1 boincer umatlas       105 Oct 12 08:02 job.xml
[2025-10-12 13:28:03] -rw-r--r--. 2 boincer umatlas 222245244 Oct 12 08:02 EVNT.46676267._002678.pool.root.1
[2025-10-12 13:28:03] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 08:02 start_atlas.sh
[2025-10-12 13:28:03] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 08:02 shared
[2025-10-12 13:28:03] -rw-r--r--. 2 boincer umatlas    569679 Oct 12 08:02 input.tar.gz
[2025-10-12 13:28:03] -rw-r--r--. 1 boincer umatlas         0 Oct 12 08:02 boinc_lockfile
[2025-10-12 13:28:03] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 08:02 pandaJob.out
[2025-10-12 13:28:03] -rw-------. 1 boincer umatlas    975520 Oct 12 08:04 agis_schedconf.cvmfs.json
[2025-10-12 13:28:03] drwx------. 5 boincer umatlas      4096 Oct 12 08:04 pilot3
[2025-10-12 13:28:03] -rw-r--r--. 1 boincer umatlas      6839 Oct 12 13:21 init_data.xml
[2025-10-12 13:28:03] -rw-------. 1 boincer umatlas 197740949 Oct 12 13:25 HITS.46676269._066445.pool.root.1
[2025-10-12 13:28:03] -rw-r--r--. 1 boincer umatlas       530 Oct 12 13:25 boinc_task_state.xml
[2025-10-12 13:28:03] -rw-------. 1 boincer umatlas      1042 Oct 12 13:26 memory_monitor_summary.json
[2025-10-12 13:28:03] -rw-------. 1 boincer umatlas   1560580 Oct 12 13:26 agis_ddmendpoints.agis.ALL.json
[2025-10-12 13:28:03] -rw-------. 1 boincer umatlas    505824 Oct 12 13:26 log.46676269._066445.job.log.tgz.1
[2025-10-12 13:28:03] -rw-------. 1 boincer umatlas      7826 Oct 12 13:26 heartbeat.json
[2025-10-12 13:28:03] -rw-------. 1 boincer umatlas        95 Oct 12 13:27 pilot_heartbeat.json
[2025-10-12 13:28:03] -rw-r--r--. 1 boincer umatlas        27 Oct 12 13:27 wrapper_checkpoint.txt
[2025-10-12 13:28:03] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 13:27 boinc_mmap_file
[2025-10-12 13:28:03] -rw-------. 1 boincer umatlas      4822 Oct 12 13:28 pilotlog.txt
[2025-10-12 13:28:03] -rw-------. 1 boincer umatlas   2296331 Oct 12 13:28 log.46676269._066445.job.log.1
[2025-10-12 13:28:03] -rw-------. 1 boincer umatlas       357 Oct 12 13:28 output.list
[2025-10-12 13:28:03] -rw-r--r--. 1 boincer umatlas       620 Oct 12 13:28 runtime_log
[2025-10-12 13:28:03] -rw-------. 1 boincer umatlas   2826240 Oct 12 13:28 result.tar.gz
[2025-10-12 13:28:03] -rw-------. 1 boincer umatlas       657 Oct 12 13:28 W5ANDmHmxR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmGthNDmtOsX1n.diag
[2025-10-12 13:28:03] -rw-r--r--. 1 boincer umatlas      8709 Oct 12 13:28 runtime_log.err
[2025-10-12 13:28:03] -rw-r--r--. 1 boincer umatlas     21001 Oct 12 13:28 stderr.txt
[2025-10-12 13:28:03] HITS file was successfully produced:
[2025-10-12 13:28:03] -rw-------. 1 boincer umatlas 197740949 Oct 12 13:25 shared/HITS.pool.root.1
[2025-10-12 13:28:03]  *** Contents of shared directory: ***
[2025-10-12 13:28:03] total 413488
[2025-10-12 13:28:03] -rw-r--r--. 2 boincer umatlas 222245244 Oct 12 08:02 ATLAS.root_0
[2025-10-12 13:28:03] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 08:02 start_atlas.sh
[2025-10-12 13:28:03] -rw-r--r--. 2 boincer umatlas    569679 Oct 12 08:02 input.tar.gz
[2025-10-12 13:28:03] -rw-------. 1 boincer umatlas 197740949 Oct 12 13:25 HITS.pool.root.1
[2025-10-12 13:28:03] -rw-------. 1 boincer umatlas   2826240 Oct 12 13:28 result.tar.gz
13:28:04 (28687): run_atlas exited; CPU time 45618.659936
13:28:04 (28687): called boinc_finish(0)

</stderr_txt>
]]>

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