Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
16:31:08 (2712988): wrapper (7.7.26015): starting
16:31:08 (2712988): wrapper: running run_atlas (--nthreads 3)
[2025-10-12 16:31:08] Arguments: --nthreads 3
[2025-10-12 16:31:08] Threads: 3
[2025-10-12 16:31:08] Checking for CVMFS
[2025-10-12 16:31:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 16:31:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 16:31:08] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 16:31:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 16:31:09] 2.9.2.0 233307 4469 65112 151623 1 56 2923682 36864000 0 130560 0 3263751 99.990 150580 880 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-12 16:31:09] CVMFS is ok
[2025-10-12 16:31:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 16:31:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 16:31:09] Further information can be found at the LHC@home message board.
[2025-10-12 16:31:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 16:31:09] Checking for apptainer binary...
[2025-10-12 16:31:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 16:31:09] Running /usr/bin/apptainer --version
[2025-10-12 16:31:09] apptainer version 1.4.1-1.1
[2025-10-12 16:31:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 16:31:09] atlasA221b
[2025-10-12 16:31:09] apptainer works
[2025-10-12 16:31:09] Set ATHENA_PROC_NUMBER=3
[2025-10-12 16:31:09] Set ATHENA_CORE_NUMBER=3
[2025-10-12 16:31:09] Starting ATLAS job with PandaID=6838851572
[2025-10-12 16:31:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 18:07:31]  *** The last 200 lines of the pilot log: ***
[2025-10-12 18:07:31] 2025-10-12 16:06:45,647 | INFO     | cat /etc/os-release:
[2025-10-12 18:07:31] NAME="CentOS Linux"
[2025-10-12 18:07:31] VERSION="7 (Core)"
[2025-10-12 18:07:31] ID="centos"
[2025-10-12 18:07:31] ID_LIKE="rhel fedora"
[2025-10-12 18:07:31] VERSION_ID="7"
[2025-10-12 18:07:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 18:07:31] ANSI_COLOR="0;31"
[2025-10-12 18:07:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 18:07:31] HOME_URL="https://www.centos.org/"
[2025-10-12 18:07:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 18:07:31] 
[2025-10-12 18:07:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 18:07:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 18:07:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 18:07:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 18:07:31] 
[2025-10-12 18:07:31] 2025-10-12 16:06:45,648 | INFO     | ***************************************
[2025-10-12 18:07:31] 2025-10-12 16:06:46,150 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-12 18:07:31] 2025-10-12 16:06:46,160 | INFO     | sufficient remaining disk space (357786714112 B)
[2025-10-12 18:07:31] 2025-10-12 16:06:46,160 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 18:07:31] 2025-10-12 16:06:46,160 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 18:07:31] 2025-10-12 16:06:46,160 | INFO     | update_server=False
[2025-10-12 18:07:31] 2025-10-12 16:06:46,160 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 18:07:31] 2025-10-12 16:06:46,160 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 18:07:31] 2025-10-12 16:06:46,160 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 18:07:31] 2025-10-12 16:06:46,160 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 18:07:31] 2025-10-12 16:06:46,160 | INFO     | aborting loop
[2025-10-12 18:07:31] 2025-10-12 16:06:46,559 | INFO     | all payload control threads have been joined
[2025-10-12 18:07:31] 2025-10-12 16:06:46,587 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 18:07:31] 2025-10-12 16:06:47,125 | INFO     | all data control threads have been joined
[2025-10-12 18:07:31] 2025-10-12 16:06:47,165 | INFO     | [job] retrieve thread has finished
[2025-10-12 18:07:31] 2025-10-12 16:06:47,166 | INFO     | [job] job monitor thread has finished
[2025-10-12 18:07:31] 2025-10-12 16:06:47,167 | INFO     | [job] queue monitor thread has finished
[2025-10-12 18:07:31] 2025-10-12 16:06:47,453 | INFO     | [payload] validate_post thread has finished
[2025-10-12 18:07:31] 2025-10-12 16:06:47,565 | INFO     | [payload] control thread has finished
[2025-10-12 18:07:31] 2025-10-12 16:06:47,614 | INFO     | all job control threads have been joined
[2025-10-12 18:07:31] 2025-10-12 16:06:47,887 | INFO     | [job] validate thread has finished
[2025-10-12 18:07:31] 2025-10-12 16:06:47,907 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 18:07:31] 2025-10-12 16:06:48,034 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 18:07:31] 2025-10-12 16:06:48,042 | INFO     | [data] copytool_in thread has finished
[2025-10-12 18:07:31] 2025-10-12 16:06:48,073 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 18:07:31] 2025-10-12 16:06:48,130 | INFO     | [data] control thread has finished
[2025-10-12 18:07:31] 2025-10-12 16:06:48,165 | INFO     | [data] copytool_out thread has finished
[2025-10-12 18:07:31] 2025-10-12 16:06:48,484 | INFO     | [payload] failed_post thread has finished
[2025-10-12 18:07:31] 2025-10-12 16:06:48,619 | INFO     | [job] control thread has finished
[2025-10-12 18:07:31] 2025-10-12 16:06:50,592 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 18:07:31] 2025-10-12 16:06:56,616 | INFO     | job.realtimelogging is not enabled
[2025-10-12 18:07:31] 2025-10-12 16:06:57,621 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 18:07:31] 2025-10-12 16:07:16,426 | INFO     | PID=2716736 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 18:07:31] 2025-10-12 16:07:16,427 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 18:07:31] 2025-10-12 16:07:16,427 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 18:07:31] 2025-10-12 16:07:16,427 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 18:07:31] 2025-10-12 16:07:24,669 | INFO     | [monitor] cgroup control has ended
[2025-10-12 18:07:31] 2025-10-12 16:07:26,673 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140037222135616)>', '<ExcThread(monitor, started 140036460766976)>']
[2025-10-12 18:07:31] 2025-10-12 16:07:27,481 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 18:07:31] 2025-10-12 16:07:27,482 | INFO     | [monitor] control thread has ended
[2025-10-12 18:07:31] 2025-10-12 16:07:31,681 | INFO     | all workflow threads have been joined
[2025-10-12 18:07:31] 2025-10-12 16:07:31,681 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 18:07:31] 2025-10-12 16:07:31,682 | INFO     | traces error code: 0
[2025-10-12 18:07:31] 2025-10-12 16:07:31,682 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 18:07:31] 2025-10-12 16:07:31,763 [wrapper] ==== pilot stdout END ====
[2025-10-12 18:07:31] 2025-10-12 16:07:31,767 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 18:07:31] 2025-10-12 16:07:31,770 [wrapper] pilotpid: 2716736
[2025-10-12 18:07:31] 2025-10-12 16:07:31,772 [wrapper] Pilot exit status: 0
[2025-10-12 18:07:31] 2025-10-12 16:07:31,781 [wrapper] pandaids: 6838851572
[2025-10-12 18:07:31] 2025-10-12 16:07:31,805 [wrapper] cleanup supervisor_pilot 2761496 2716737
[2025-10-12 18:07:31] 2025-10-12 16:07:31,808 [wrapper] Test setup, not cleaning
[2025-10-12 18:07:31] 2025-10-12 16:07:31,811 [wrapper] apfmon messages muted
[2025-10-12 18:07:31] 2025-10-12 16:07:31,814 [wrapper] ==== wrapper stdout END ====
[2025-10-12 18:07:31] 2025-10-12 16:07:31,817 [wrapper] ==== wrapper stderr END ====
[2025-10-12 18:07:31]  *** Error codes and diagnostics ***
[2025-10-12 18:07:31]     "exeErrorCode": 0,
[2025-10-12 18:07:31]     "exeErrorDiag": "",
[2025-10-12 18:07:31]     "pilotErrorCode": 0,
[2025-10-12 18:07:31]     "pilotErrorDiag": "",
[2025-10-12 18:07:31]  *** Listing of results directory ***
[2025-10-12 18:07:31] total 416620
[2025-10-12 18:07:31] -rw-r--r-- 1 boinc boinc    563267 Oct  7 09:02 pilot3.tar.gz
[2025-10-12 18:07:31] -rw-r--r-- 1 boinc boinc      5112 Oct 11 21:43 queuedata.json
[2025-10-12 18:07:31] -rwx------ 1 boinc boinc     36292 Oct 11 21:45 runpilot2-wrapper.sh
[2025-10-12 18:07:31] -rw-r--r-- 1 boinc boinc       100 Oct 12 16:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 18:07:31] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 16:31 run_atlas
[2025-10-12 18:07:31] -rw-r--r-- 1 boinc boinc       105 Oct 12 16:31 job.xml
[2025-10-12 18:07:31] -rw-r--r-- 2 boinc boinc 223345732 Oct 12 16:31 EVNT.46676267._002561.pool.root.1
[2025-10-12 18:07:31] -rw-r--r-- 2 boinc boinc    576709 Oct 12 16:31 input.tar.gz
[2025-10-12 18:07:31] -rw-r--r-- 2 boinc boinc     15120 Oct 12 16:31 start_atlas.sh
[2025-10-12 18:07:31] drwxrwx--x 2 boinc boinc      4096 Oct 12 16:31 shared
[2025-10-12 18:07:31] -rw-r--r-- 1 boinc boinc         0 Oct 12 16:31 boinc_setup_complete
[2025-10-12 18:07:31] -rw-r--r-- 1 boinc boinc      6197 Oct 12 16:31 init_data.xml
[2025-10-12 18:07:31] -rw-r--r-- 1 boinc boinc         0 Oct 12 16:31 boinc_lockfile
[2025-10-12 18:07:31] -rw-r--r-- 1 boinc boinc      2550 Oct 12 16:31 pandaJob.out
[2025-10-12 18:07:31] -rw------- 1 boinc boinc    975528 Oct 12 16:31 agis_schedconf.cvmfs.json
[2025-10-12 18:07:31] -rw------- 1 boinc boinc   1560580 Oct 12 16:31 agis_ddmendpoints.agis.ALL.json
[2025-10-12 18:07:31] drwx------ 4 boinc boinc      4096 Oct 12 16:31 pilot3
[2025-10-12 18:07:31] -rw------- 1 boinc boinc 197173810 Oct 12 18:06 HITS.46676269._063745.pool.root.1
[2025-10-12 18:07:31] -rw-r--r-- 1 boinc boinc       529 Oct 12 18:06 boinc_task_state.xml
[2025-10-12 18:07:31] -rw------- 1 boinc boinc      1028 Oct 12 18:06 memory_monitor_summary.json
[2025-10-12 18:07:31] -rw------- 1 boinc boinc    270174 Oct 12 18:06 log.46676269._063745.job.log.tgz.1
[2025-10-12 18:07:31] -rw------- 1 boinc boinc      7790 Oct 12 18:06 heartbeat.json
[2025-10-12 18:07:31] -rw------- 1 boinc boinc        95 Oct 12 18:07 pilot_heartbeat.json
[2025-10-12 18:07:31] -rw-r--r-- 1 boinc boinc      8192 Oct 12 18:07 boinc_mmap_file
[2025-10-12 18:07:31] -rw-r--r-- 1 boinc boinc        27 Oct 12 18:07 wrapper_checkpoint.txt
[2025-10-12 18:07:31] -rw------- 1 boinc boinc      4824 Oct 12 18:07 pilotlog.txt
[2025-10-12 18:07:31] -rw------- 1 boinc boinc    828632 Oct 12 18:07 log.46676269._063745.job.log.1
[2025-10-12 18:07:31] -rw------- 1 boinc boinc       357 Oct 12 18:07 output.list
[2025-10-12 18:07:31] -rw-r--r-- 1 boinc boinc       620 Oct 12 18:07 runtime_log
[2025-10-12 18:07:31] -rw------- 1 boinc boinc   1116160 Oct 12 18:07 result.tar.gz
[2025-10-12 18:07:31] -rw-r--r-- 1 boinc boinc      8797 Oct 12 18:07 runtime_log.err
[2025-10-12 18:07:31] -rw------- 1 boinc boinc       663 Oct 12 18:07 dclNDmkhuR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmkTSMDmBurrUo.diag
[2025-10-12 18:07:31] -rw-r--r-- 1 boinc boinc      8882 Oct 12 18:07 stderr.txt
[2025-10-12 18:07:31] HITS file was successfully produced:
[2025-10-12 18:07:31] -rw------- 1 boinc boinc 197173810 Oct 12 18:06 shared/HITS.pool.root.1
[2025-10-12 18:07:31]  *** Contents of shared directory: ***
[2025-10-12 18:07:31] total 412348
[2025-10-12 18:07:31] -rw-r--r-- 2 boinc boinc 223345732 Oct 12 16:31 ATLAS.root_0
[2025-10-12 18:07:31] -rw-r--r-- 2 boinc boinc    576709 Oct 12 16:31 input.tar.gz
[2025-10-12 18:07:31] -rw-r--r-- 2 boinc boinc     15120 Oct 12 16:31 start_atlas.sh
[2025-10-12 18:07:31] -rw------- 1 boinc boinc 197173810 Oct 12 18:06 HITS.pool.root.1
[2025-10-12 18:07:31] -rw------- 1 boinc boinc   1116160 Oct 12 18:07 result.tar.gz
18:07:33 (2712988): run_atlas exited; CPU time 16496.574816
18:07:33 (2712988): called boinc_finish(0)

</stderr_txt>
]]>

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