Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:11:23 (116551): wrapper (7.7.26015): starting
00:11:23 (116551): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 00:11:23] Arguments: --nthreads 8
[2025-10-12 00:11:23] Threads: 8
[2025-10-12 00:11:23] Checking for CVMFS
[2025-10-12 00:11:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 00:11:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 00:11:25] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 00:11:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 00:11:26] 2.13.1.0 5421 5180 110408 151607 2 249 39595216 40960000 14733 16776704 0 8055717 99.873 2000292 35295 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 00:11:26] CVMFS is ok
[2025-10-12 00:11:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 00:11:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 00:11:26] Further information can be found at the LHC@home message board.
[2025-10-12 00:11:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 00:11:26] Checking for apptainer binary...
[2025-10-12 00:11:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 00:11:26] Running /usr/bin/apptainer --version
[2025-10-12 00:11:26] apptainer version 1.4.3-1.el9
[2025-10-12 00:11:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 00:11:27] c-210-37-1.aglt2.org
[2025-10-12 00:11:27] apptainer works
[2025-10-12 00:11:27] Set ATHENA_PROC_NUMBER=8
[2025-10-12 00:11:27] Set ATHENA_CORE_NUMBER=8
[2025-10-12 00:11:27] Starting ATLAS job with PandaID=6839083855
[2025-10-12 00:11:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 08:17:12]  *** The last 200 lines of the pilot log: ***
[2025-10-12 08:17:12] 2025-10-12 12:16:28,069 | INFO     | sum of square deviations: 32604723375.76277
[2025-10-12 08:17:12] 2025-10-12 12:16:28,094 | INFO     | time since job start (28999s) is within the limit (172800.0s)
[2025-10-12 08:17:12] 2025-10-12 12:16:28,101 | INFO     | sum of deviations: 110361720185.77975
[2025-10-12 08:17:12] 2025-10-12 12:16:28,101 | INFO     | mean x: 1760256918.338983
[2025-10-12 08:17:12] 2025-10-12 12:16:28,102 | INFO     | mean y: 2472126.0826271186
[2025-10-12 08:17:12] 2025-10-12 12:16:28,102 | INFO     | -- intersect: -5955713111.005436
[2025-10-12 08:17:12] 2025-10-12 12:16:28,102 | INFO     | intersect: -5955713111.005436
[2025-10-12 08:17:12] 2025-10-12 12:16:28,102 | INFO     | chi2: 6.895554268253681
[2025-10-12 08:17:12] 2025-10-12 12:16:28,103 | INFO     | sum of square deviations: 31579474046.27401
[2025-10-12 08:17:12] 2025-10-12 12:16:28,194 | INFO     | monitor loop #1710: job 0:6839083855 is in state 'finished'
[2025-10-12 08:17:12] 2025-10-12 12:16:28,194 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 08:17:12] 2025-10-12 12:16:28,293 | INFO     | sum of deviations: 204517266419.87378
[2025-10-12 08:17:12] 2025-10-12 12:16:28,293 | INFO     | mean x: 1760256765.8415418
[2025-10-12 08:17:12] 2025-10-12 12:16:28,293 | INFO     | mean y: 2486071.119914347
[2025-10-12 08:17:12] 2025-10-12 12:16:28,294 | INFO     | -- intersect: -11397415694.80186
[2025-10-12 08:17:12] 2025-10-12 12:16:28,294 | INFO     | intersect: -11397415694.80186
[2025-10-12 08:17:12] 2025-10-12 12:16:28,294 | INFO     | chi2: 4.536923086552241
[2025-10-12 08:17:12] 2025-10-12 12:16:28,294 | INFO     | current chi2=4.536923086552241 (change=34.20509925591189 %)
[2025-10-12 08:17:12] 2025-10-12 12:16:28,295 | INFO     | sum of square deviations: 30576002662.89393
[2025-10-12 08:17:12] 2025-10-12 12:16:28,326 | INFO     | sum of deviations: 202156086454.65143
[2025-10-12 08:17:12] 2025-10-12 12:16:28,397 | INFO     | mean x: 1760256613.3484848
[2025-10-12 08:17:12] 2025-10-12 12:16:28,397 | INFO     | mean y: 2485712.287878788
[2025-10-12 08:17:12] 2025-10-12 12:16:28,397 | INFO     | -- intersect: -11635614664.45929
[2025-10-12 08:17:12] 2025-10-12 12:16:28,397 | INFO     | intersect: -11635614664.45929
[2025-10-12 08:17:12] 2025-10-12 12:16:28,398 | INFO     | chi2: 4.538362212571814
[2025-10-12 08:17:12] 2025-10-12 12:16:28,398 | INFO     | current chi2=4.538362212571814 (change=-0.03172030894327122 %)
[2025-10-12 08:17:12] 2025-10-12 12:16:28,403 | INFO     | right removable region: 461
[2025-10-12 08:17:12] 2025-10-12 12:16:28,404 | INFO     | sum of square deviations: 31579375593.58877
[2025-10-12 08:17:12] 2025-10-12 12:16:28,414 | INFO     | sum of deviations: -39498385993.36401
[2025-10-12 08:17:12] 2025-10-12 12:16:28,414 | INFO     | mean x: 1760257070.843683
[2025-10-12 08:17:12] 2025-10-12 12:16:28,414 | INFO     | mean y: 2494397.35117773
[2025-10-12 08:17:12] 2025-10-12 12:16:28,419 | INFO     | -- intersect: 2204162794.04511
[2025-10-12 08:17:12] 2025-10-12 12:16:28,419 | INFO     | intersect: 2204162794.04511
[2025-10-12 08:17:12] 2025-10-12 12:16:28,420 | INFO     | chi2: 3.187964767702882
[2025-10-12 08:17:12] 2025-10-12 12:16:28,420 | INFO     | current chi2=3.187964767702882 (change=53.76782425772652 %)
[2025-10-12 08:17:12] 2025-10-12 12:16:28,421 | INFO     | sum of square deviations: 30575834607.96558
[2025-10-12 08:17:12] 2025-10-12 12:16:28,435 | INFO     | sum of deviations: -92296297013.09091
[2025-10-12 08:17:12] 2025-10-12 12:16:28,436 | INFO     | mean x: 1760257223.3419914
[2025-10-12 08:17:12] 2025-10-12 12:16:28,436 | INFO     | mean y: 2502404.272727273
[2025-10-12 08:17:12] 2025-10-12 12:16:28,436 | INFO     | -- intersect: 5316019617.722263
[2025-10-12 08:17:12] 2025-10-12 12:16:28,436 | INFO     | intersect: 5316019617.722263
[2025-10-12 08:17:12] 2025-10-12 12:16:28,437 | INFO     | chi2: 2.6744063763089607
[2025-10-12 08:17:12] 2025-10-12 12:16:28,437 | INFO     | current chi2=2.6744063763089607 (change=16.109286921761395 %)
[2025-10-12 08:17:12] 2025-10-12 12:16:28,437 | INFO     | left removable region: 20
[2025-10-12 08:17:12] 2025-10-12 12:16:28,438 | INFO     | sum of square deviations: 26592979977.419594
[2025-10-12 08:17:12] 2025-10-12 12:16:28,451 | INFO     | sum of deviations: -33688389376.57365
[2025-10-12 08:17:12] 2025-10-12 12:16:28,452 | INFO     | mean x: 1760257192.8526077
[2025-10-12 08:17:12] 2025-10-12 12:16:28,452 | INFO     | mean y: 2522784.498866213
[2025-10-12 08:17:12] 2025-10-12 12:16:28,452 | INFO     | -- intersect: 2232443228.3936706
[2025-10-12 08:17:12] 2025-10-12 12:16:28,452 | INFO     | intersect: 2232443228.3936706
[2025-10-12 08:17:12] 2025-10-12 12:16:28,453 | INFO     | chi2: 0.10967886082276833
[2025-10-12 08:17:12] 2025-10-12 12:16:28,453 | INFO     | -- intersect: 2232443228.3936706
[2025-10-12 08:17:12] 2025-10-12 12:16:28,453 | INFO     | current memory leak: -1.27 B/s (using 441 data points, chi2=0.11)
[2025-10-12 08:17:12] 2025-10-12 12:16:28,454 | INFO     | could have reported an average CPU frequency of 2510 MHz (19 samples)
[2025-10-12 08:17:12] 2025-10-12 12:16:28,456 | INFO     | ..............................
[2025-10-12 08:17:12] 2025-10-12 12:16:28,457 | INFO     | . Timing measurements:
[2025-10-12 08:17:12] 2025-10-12 12:16:28,457 | INFO     | . get job = 0 s
[2025-10-12 08:17:12] 2025-10-12 12:16:28,457 | INFO     | . initial setup = 4 s
[2025-10-12 08:17:12] 2025-10-12 12:16:28,457 | INFO     | . payload setup = 53 s
[2025-10-12 08:17:12] 2025-10-12 12:16:28,457 | INFO     | . stage-in = 0 s
[2025-10-12 08:17:12] 2025-10-12 12:16:28,457 | INFO     | . payload execution = 28824 s
[2025-10-12 08:17:12] 2025-10-12 12:16:28,457 | INFO     | . stage-out = 5 s
[2025-10-12 08:17:12] 2025-10-12 12:16:28,457 | INFO     | . log creation = 0 s
[2025-10-12 08:17:12] 2025-10-12 12:16:28,457 | INFO     | ..............................
[2025-10-12 08:17:12] 2025-10-12 12:16:28,634 | INFO     | 
[2025-10-12 08:17:12] 2025-10-12 12:16:28,634 | INFO     | job summary report
[2025-10-12 08:17:12] 2025-10-12 12:16:28,634 | INFO     | --------------------------------------------------
[2025-10-12 08:17:12] 2025-10-12 12:16:28,634 | INFO     | PanDA job id: 6839083855
[2025-10-12 08:17:12] 2025-10-12 12:16:28,634 | INFO     | task id: 46676269
[2025-10-12 08:17:12] 2025-10-12 12:16:28,634 | INFO     | errors: (none)
[2025-10-12 08:17:12] 2025-10-12 12:16:28,634 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 08:17:12] 2025-10-12 12:16:28,634 | INFO     | pilot state: finished 
[2025-10-12 08:17:12] 2025-10-12 12:16:28,634 | INFO     | transexitcode: 0
[2025-10-12 08:17:12] 2025-10-12 12:16:28,635 | INFO     | exeerrorcode: 0
[2025-10-12 08:17:12] 2025-10-12 12:16:28,635 | INFO     | exeerrordiag: 
[2025-10-12 08:17:12] 2025-10-12 12:16:28,635 | INFO     | exitcode: 0
[2025-10-12 08:17:12] 2025-10-12 12:16:28,635 | INFO     | exitmsg: OK
[2025-10-12 08:17:12] 2025-10-12 12:16:28,635 | INFO     | cpuconsumptiontime: 47551 s
[2025-10-12 08:17:12] 2025-10-12 12:16:28,635 | INFO     | nevents: 400
[2025-10-12 08:17:12] 2025-10-12 12:16:28,635 | INFO     | neventsw: 0
[2025-10-12 08:17:12] 2025-10-12 12:16:28,635 | INFO     | pid: 138775
[2025-10-12 08:17:12] 2025-10-12 12:16:28,635 | INFO     | pgrp: 138775
[2025-10-12 08:17:12] 2025-10-12 12:16:28,635 | INFO     | corecount: 8
[2025-10-12 08:17:12] 2025-10-12 12:16:28,635 | INFO     | event service: False
[2025-10-12 08:17:12] 2025-10-12 12:16:28,635 | INFO     | sizes: {0: 2348029, 1: 2348630, 2: 2348742, 3: 2348913, 4: 2348941, 14: 2348969, 25: 2349125, 35: 2349415, 37: 2349443, 28879: 2386466, 28886: 2395464, 28889: 2395
[2025-10-12 08:17:12] 2025-10-12 12:16:28,635 | INFO     | --------------------------------------------------
[2025-10-12 08:17:12] 2025-10-12 12:16:28,636 | INFO     | 
[2025-10-12 08:17:12] 2025-10-12 12:16:28,636 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-10-12 08:17:12] 2025-10-12 12:16:28,668 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 08:17:12] 2025-10-12 12:16:28,675 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 08:17:12] 2025-10-12 12:16:28,675 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 08:17:12] 2025-10-12 12:16:28,675 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 08:17:12] 2025-10-12 12:16:28,675 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 08:17:12] 2025-10-12 12:16:28,675 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 08:17:12] 2025-10-12 12:16:28,675 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 08:17:12] 2025-10-12 12:16:28,675 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 08:17:12] 2025-10-12 12:16:28,676 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 08:17:12] 2025-10-12 12:16:28,676 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 08:17:12] 2025-10-12 12:16:28,676 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 08:17:12] 2025-10-12 12:16:28,676 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 08:17:12] 2025-10-12 12:16:28,676 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 08:17:12] 2025-10-12 12:16:28,676 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 08:17:12] 2025-10-12 12:16:28,676 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 08:17:12] 2025-10-12 12:16:28,676 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 08:17:12] 2025-10-12 12:16:28,676 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 08:17:12] 2025-10-12 12:16:28,676 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 08:17:12] 2025-10-12 12:16:28,676 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 08:17:12] 2025-10-12 12:16:28,676 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 08:17:12] 2025-10-12 12:16:28,677 | INFO     | job 6839083855 has completed (purged errors)
[2025-10-12 08:17:12] 2025-10-12 12:16:28,677 | INFO     | overall cleanup function is called
[2025-10-12 08:17:12] 2025-10-12 12:16:29,686 | INFO     | --- collectZombieJob: --- 10, [138775]
[2025-10-12 08:17:12] 2025-10-12 12:16:29,686 | INFO     | zombie collector waiting for pid 138775
[2025-10-12 08:17:12] 2025-10-12 12:16:29,686 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 08:17:12] 2025-10-12 12:16:29,686 | INFO     | collected zombie processes
[2025-10-12 08:17:12] 2025-10-12 12:16:29,686 | INFO     | will attempt to kill all subprocesses of pid=138775
[2025-10-12 08:17:12] 2025-10-12 12:16:30,894 | INFO     | process IDs to be killed: [138775] (in reverse order)
[2025-10-12 08:17:12] 2025-10-12 12:16:31,127 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 08:17:12] 2025-10-12 12:16:31,128 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 08:17:12] 2025-10-12 12:16:31,147 | INFO     | did not find any defunct processes belonging to 138775
[2025-10-12 08:17:12] 2025-10-12 12:16:31,187 | INFO     | did not find any defunct processes belonging to 138775
[2025-10-12 08:17:12] 2025-10-12 12:16:31,187 | INFO     | ready for new job
[2025-10-12 08:17:12] 2025-10-12 12:16:31,187 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 08:17:12] 2025-10-12 12:16:31,194 | INFO     | ***************************************
[2025-10-12 08:17:12] 2025-10-12 12:16:31,194 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 08:17:12] 2025-10-12 12:16:31,194 | INFO     | ***************************************
[2025-10-12 08:17:12] 2025-10-12 12:16:31,194 | INFO     | 
[2025-10-12 08:17:12] 2025-10-12 12:16:31,197 | INFO     | architecture information:
[2025-10-12 08:17:12] 2025-10-12 12:16:31,212 | INFO     | executing command: cat /etc/os-release
[2025-10-12 08:17:12] 2025-10-12 12:16:31,267 | INFO     | cat /etc/os-release:
[2025-10-12 08:17:12] NAME="CentOS Linux"
[2025-10-12 08:17:12] VERSION="7 (Core)"
[2025-10-12 08:17:12] ID="centos"
[2025-10-12 08:17:12] ID_LIKE="rhel fedora"
[2025-10-12 08:17:12] VERSION_ID="7"
[2025-10-12 08:17:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 08:17:12] ANSI_COLOR="0;31"
[2025-10-12 08:17:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 08:17:12] HOME_URL="https://www.centos.org/"
[2025-10-12 08:17:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 08:17:12] 
[2025-10-12 08:17:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 08:17:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 08:17:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 08:17:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 08:17:12] 
[2025-10-12 08:17:12] 2025-10-12 12:16:31,267 | INFO     | ***************************************
[2025-10-12 08:17:12] 2025-10-12 12:16:31,771 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-10-12 08:17:12] 2025-10-12 12:16:31,818 | INFO     | sufficient remaining disk space (74236035072 B)
[2025-10-12 08:17:12] 2025-10-12 12:16:31,819 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 08:17:12] 2025-10-12 12:16:31,819 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 08:17:12] 2025-10-12 12:16:31,819 | INFO     | update_server=False
[2025-10-12 08:17:12] 2025-10-12 12:16:31,819 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 08:17:12] 2025-10-12 12:16:31,819 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 08:17:12] 2025-10-12 12:16:31,824 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 08:17:12] 2025-10-12 12:16:31,824 | INFO     | aborting loop
[2025-10-12 08:17:12] 2025-10-12 12:16:31,826 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 08:17:12] 2025-10-12 12:16:32,343 | INFO     | all payload control threads have been joined
[2025-10-12 08:17:12] 2025-10-12 12:16:32,761 | INFO     | all data control threads have been joined
[2025-10-12 08:17:12] 2025-10-12 12:16:32,830 | INFO     | [job] job monitor thread has finished
[2025-10-12 08:17:12] 2025-10-12 12:16:32,852 | INFO     | [job] retrieve thread has finished
[2025-10-12 08:17:12] 2025-10-12 12:16:32,889 | INFO     | [payload] failed_post thread has finished
[2025-10-12 08:17:12] 2025-10-12 12:16:33,350 | INFO     | [payload] control thread has finished
[2025-10-12 08:17:12] 2025-10-12 12:16:33,485 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 08:17:12] 2025-10-12 12:16:33,536 | INFO     | all job control threads have been joined
[2025-10-12 08:17:12] 2025-10-12 12:16:33,602 | INFO     | [job] validate thread has finished
[2025-10-12 08:17:12] 2025-10-12 12:16:33,602 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 08:17:12] 2025-10-12 12:16:33,603 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 08:17:12] 2025-10-12 12:16:33,648 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 08:17:12] 2025-10-12 12:16:33,768 | INFO     | [data] control thread has finished
[2025-10-12 08:17:12] 2025-10-12 12:16:33,836 | INFO     | [data] copytool_out thread has finished
[2025-10-12 08:17:12] 2025-10-12 12:16:34,191 | INFO     | [data] copytool_in thread has finished
[2025-10-12 08:17:12] 2025-10-12 12:16:34,446 | INFO     | [payload] validate_post thread has finished
[2025-10-12 08:17:12] 2025-10-12 12:16:34,542 | INFO     | [job] control thread has finished
[2025-10-12 08:17:12] 2025-10-12 12:16:34,654 | INFO     | [job] queue monitor thread has finished
[2025-10-12 08:17:12] 2025-10-12 12:16:35,831 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 08:17:12] 2025-10-12 12:16:42,079 | INFO     | job.realtimelogging is not enabled
[2025-10-12 08:17:12] 2025-10-12 12:16:43,085 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 08:17:12] 2025-10-12 12:17:02,405 | INFO     | PID=125645 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 08:17:12] 2025-10-12 12:17:02,405 | INFO     | .. there are 10 such processes running
[2025-10-12 08:17:12] 2025-10-12 12:17:02,406 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 08:17:12] 2025-10-12 12:17:02,406 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 08:17:12] 2025-10-12 12:17:02,406 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 08:17:12] 2025-10-12 12:17:05,001 | INFO     | [monitor] cgroup control has ended
[2025-10-12 08:17:12] 2025-10-12 12:17:06,016 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140108581541696)>', '<ExcThread(monitor, started 140107864598272)>']
[2025-10-12 08:17:12] 2025-10-12 12:17:06,431 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 08:17:12] 2025-10-12 12:17:06,431 | INFO     | [monitor] control thread has ended
[2025-10-12 08:17:12] 2025-10-12 12:17:11,047 | INFO     | all workflow threads have been joined
[2025-10-12 08:17:12] 2025-10-12 12:17:11,047 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 08:17:12] 2025-10-12 12:17:11,047 | INFO     | traces error code: 0
[2025-10-12 08:17:12] 2025-10-12 12:17:11,047 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 08:17:12] 2025-10-12 12:17:11,641 [wrapper] ==== pilot stdout END ====
[2025-10-12 08:17:12] 2025-10-12 12:17:11,689 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 08:17:12] 2025-10-12 12:17:11,716 [wrapper] pilotpid: 125645
[2025-10-12 08:17:12] 2025-10-12 12:17:11,739 [wrapper] Pilot exit status: 0
[2025-10-12 08:17:12] 2025-10-12 12:17:11,866 [wrapper] pandaids: 6839083855
[2025-10-12 08:17:12] 2025-10-12 12:17:12,039 [wrapper] cleanup supervisor_pilot  875532 125646
[2025-10-12 08:17:12] 2025-10-12 12:17:12,078 [wrapper] Test setup, not cleaning
[2025-10-12 08:17:12] 2025-10-12 12:17:12,104 [wrapper] apfmon messages muted
[2025-10-12 08:17:12] 2025-10-12 12:17:12,131 [wrapper] ==== wrapper stdout END ====
[2025-10-12 08:17:12] 2025-10-12 12:17:12,151 [wrapper] ==== wrapper stderr END ====
[2025-10-12 08:17:12]  *** Error codes and diagnostics ***
[2025-10-12 08:17:12]     "exeErrorCode": 0,
[2025-10-12 08:17:12]     "exeErrorDiag": "",
[2025-10-12 08:17:12]     "pilotErrorCode": 0,
[2025-10-12 08:17:12]     "pilotErrorDiag": "",
[2025-10-12 08:17:12]  *** Listing of results directory ***
[2025-10-12 08:17:12] total 424540
[2025-10-12 08:17:12] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 18:51 pilot3.tar.gz
[2025-10-12 08:17:12] -rwx------. 1 boincer umatlas     36292 Oct 11 19:05 runpilot2-wrapper.sh
[2025-10-12 08:17:12] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 19:05 queuedata.json
[2025-10-12 08:17:12] -rw-r--r--. 1 boincer umatlas       100 Oct 12 00:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 08:17:12] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 00:11 run_atlas
[2025-10-12 08:17:12] -rw-r--r--. 1 boincer umatlas       105 Oct 12 00:11 job.xml
[2025-10-12 08:17:12] -rw-r--r--. 2 boincer umatlas 222233762 Oct 12 00:11 EVNT.46676267._002686.pool.root.1
[2025-10-12 08:17:12] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:11 start_atlas.sh
[2025-10-12 08:17:12] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 00:11 shared
[2025-10-12 08:17:12] -rw-r--r--. 2 boincer umatlas    569678 Oct 12 00:11 input.tar.gz
[2025-10-12 08:17:12] -rw-r--r--. 1 boincer umatlas         0 Oct 12 00:11 boinc_lockfile
[2025-10-12 08:17:12] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 00:11 pandaJob.out
[2025-10-12 08:17:12] -rw-------. 1 boincer umatlas    975512 Oct 12 00:13 agis_schedconf.cvmfs.json
[2025-10-12 08:17:12] drwx------. 5 boincer umatlas      4096 Oct 12 00:13 pilot3
[2025-10-12 08:17:12] -rw-r--r--. 1 boincer umatlas      6841 Oct 12 08:12 init_data.xml
[2025-10-12 08:17:12] -rw-------. 1 boincer umatlas 200208516 Oct 12 08:12 HITS.46676269._066619.pool.root.1
[2025-10-12 08:17:12] -rw-r--r--. 1 boincer umatlas       531 Oct 12 08:12 boinc_task_state.xml
[2025-10-12 08:17:12] -rw-------. 1 boincer umatlas      1044 Oct 12 08:15 memory_monitor_summary.json
[2025-10-12 08:17:12] -rw-------. 1 boincer umatlas   1560580 Oct 12 08:15 agis_ddmendpoints.agis.ALL.json
[2025-10-12 08:17:12] -rw-------. 1 boincer umatlas    638549 Oct 12 08:15 log.46676269._066619.job.log.tgz.1
[2025-10-12 08:17:12] -rw-------. 1 boincer umatlas        95 Oct 12 08:16 pilot_heartbeat.json
[2025-10-12 08:17:12] -rw-------. 1 boincer umatlas      7832 Oct 12 08:16 heartbeat.json
[2025-10-12 08:17:12] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 08:17 boinc_mmap_file
[2025-10-12 08:17:12] -rw-r--r--. 1 boincer umatlas        28 Oct 12 08:17 wrapper_checkpoint.txt
[2025-10-12 08:17:12] -rw-------. 1 boincer umatlas      4895 Oct 12 08:17 pilotlog.txt
[2025-10-12 08:17:12] -rw-------. 1 boincer umatlas   3549047 Oct 12 08:17 log.46676269._066619.job.log.1
[2025-10-12 08:17:12] -rw-------. 1 boincer umatlas       357 Oct 12 08:17 output.list
[2025-10-12 08:17:12] -rw-r--r--. 1 boincer umatlas       620 Oct 12 08:17 runtime_log
[2025-10-12 08:17:12] -rw-------. 1 boincer umatlas   4208640 Oct 12 08:17 result.tar.gz
[2025-10-12 08:17:12] -rw-r--r--. 1 boincer umatlas      8714 Oct 12 08:17 runtime_log.err
[2025-10-12 08:17:12] -rw-------. 1 boincer umatlas       657 Oct 12 08:17 AilLDmNpxR8n9Rq4apOajLDm4fhM0noT9bVof3QYDm2kSMDmjmHVPo.diag
[2025-10-12 08:17:12] -rw-r--r--. 1 boincer umatlas     21090 Oct 12 08:17 stderr.txt
[2025-10-12 08:17:12] HITS file was successfully produced:
[2025-10-12 08:17:12] -rw-------. 1 boincer umatlas 200208516 Oct 12 08:12 shared/HITS.pool.root.1
[2025-10-12 08:17:12]  *** Contents of shared directory: ***
[2025-10-12 08:17:12] total 417244
[2025-10-12 08:17:12] -rw-r--r--. 2 boincer umatlas 222233762 Oct 12 00:11 ATLAS.root_0
[2025-10-12 08:17:12] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:11 start_atlas.sh
[2025-10-12 08:17:12] -rw-r--r--. 2 boincer umatlas    569678 Oct 12 00:11 input.tar.gz
[2025-10-12 08:17:12] -rw-------. 1 boincer umatlas 200208516 Oct 12 08:12 HITS.pool.root.1
[2025-10-12 08:17:12] -rw-------. 1 boincer umatlas   4208640 Oct 12 08:17 result.tar.gz
08:17:14 (116551): run_atlas exited; CPU time 48276.313340
08:17:14 (116551): called boinc_finish(0)

</stderr_txt>
]]>

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