Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
00:14:04 (30140): wrapper (7.7.26015): starting
00:14:04 (30140): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 00:14:04] Arguments: --nthreads 8
[2025-10-12 00:14:04] Threads: 8
[2025-10-12 00:14:04] Checking for CVMFS
[2025-10-12 00:14:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 00:14:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 00:14:05] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 00:14:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 00:14:05] 2.11.2.0 2843 2341 68636 151607 0 57 11613223 20275201 1 130560 0 1644606 99.990 81084 35177 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 00:14:05] CVMFS is ok
[2025-10-12 00:14:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 00:14:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 00:14:05] Further information can be found at the LHC@home message board.
[2025-10-12 00:14:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 00:14:05] Checking for apptainer binary...
[2025-10-12 00:14:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 00:14:05] Running /usr/bin/apptainer --version
[2025-10-12 00:14:05] apptainer version 1.3.2-1.el7
[2025-10-12 00:14:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 00:14:07] c-204-34.aglt2.org
[2025-10-12 00:14:07] apptainer works
[2025-10-12 00:14:07] Set ATHENA_PROC_NUMBER=8
[2025-10-12 00:14:07] Set ATHENA_CORE_NUMBER=8
[2025-10-12 00:14:07] Starting ATLAS job with PandaID=6839083895
[2025-10-12 00:14:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 02:18:43]  *** The last 200 lines of the pilot log: ***
[2025-10-12 02:18:43] 2025-10-12 06:17:46,344 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 02:18:43] 2025-10-12 06:17:46,344 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 02:18:43] 2025-10-12 06:17:46,345 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 02:18:43] 2025-10-12 06:17:46,345 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 02:18:43] 2025-10-12 06:17:46,347 | INFO     | fitting pss+swap vs Time
[2025-10-12 02:18:43] 2025-10-12 06:17:46,347 | INFO     | sum of square deviations: 549294020.0
[2025-10-12 02:18:43] 2025-10-12 06:17:46,348 | INFO     | sum of deviations: -3402089865.0000024
[2025-10-12 02:18:43] 2025-10-12 06:17:46,348 | INFO     | mean x: 1760246156.0
[2025-10-12 02:18:43] 2025-10-12 06:17:46,348 | INFO     | mean y: 2608338.256198347
[2025-10-12 02:18:43] 2025-10-12 06:17:46,348 | INFO     | -- intersect: 10904812602.618687
[2025-10-12 02:18:43] 2025-10-12 06:17:46,349 | INFO     | intersect: 10904812602.618687
[2025-10-12 02:18:43] 2025-10-12 06:17:46,349 | INFO     | chi2: 1.7671103832580661
[2025-10-12 02:18:43] 2025-10-12 06:17:46,349 | INFO     | sum of square deviations: 483971865.0
[2025-10-12 02:18:43] 2025-10-12 06:17:46,350 | INFO     | sum of deviations: -2076958713.5000052
[2025-10-12 02:18:43] 2025-10-12 06:17:46,350 | INFO     | mean x: 1760246003.5
[2025-10-12 02:18:43] 2025-10-12 06:17:46,350 | INFO     | mean y: 2611433.3017241377
[2025-10-12 02:18:43] 2025-10-12 06:17:46,350 | INFO     | -- intersect: 7556683352.075113
[2025-10-12 02:18:43] 2025-10-12 06:17:46,350 | INFO     | intersect: 7556683352.075113
[2025-10-12 02:18:43] 2025-10-12 06:17:46,351 | INFO     | chi2: 1.7699231959036184
[2025-10-12 02:18:43] 2025-10-12 06:17:46,351 | INFO     | current chi2=1.7699231959036184 (change=-0.15917583147048045 %)
[2025-10-12 02:18:43] 2025-10-12 06:17:46,351 | INFO     | right removable region: 115
[2025-10-12 02:18:43] 2025-10-12 06:17:46,351 | INFO     | sum of square deviations: 483971865.0
[2025-10-12 02:18:43] 2025-10-12 06:17:46,352 | INFO     | sum of deviations: -23993334533.0
[2025-10-12 02:18:43] 2025-10-12 06:17:46,352 | INFO     | mean x: 1760246308.5
[2025-10-12 02:18:43] 2025-10-12 06:17:46,352 | INFO     | mean y: 2655621.775862069
[2025-10-12 02:18:43] 2025-10-12 06:17:46,352 | INFO     | -- intersect: 87268427859.00874
[2025-10-12 02:18:43] 2025-10-12 06:17:46,352 | INFO     | intersect: 87268427859.00874
[2025-10-12 02:18:43] 2025-10-12 06:17:46,352 | INFO     | chi2: 0.13352851073276636
[2025-10-12 02:18:43] 2025-10-12 06:17:46,353 | INFO     | current chi2=0.13352851073276636 (change=92.44368025914846 %)
[2025-10-12 02:18:43] 2025-10-12 06:17:46,353 | INFO     | sum of square deviations: 424045160.0
[2025-10-12 02:18:43] 2025-10-12 06:17:46,353 | INFO     | sum of deviations: -24647659268.000004
[2025-10-12 02:18:43] 2025-10-12 06:17:46,353 | INFO     | mean x: 1760246461.0
[2025-10-12 02:18:43] 2025-10-12 06:17:46,354 | INFO     | mean y: 2657144.972972973
[2025-10-12 02:18:43] 2025-10-12 06:17:46,354 | INFO     | -- intersect: 102317125251.22575
[2025-10-12 02:18:43] 2025-10-12 06:17:46,354 | INFO     | intersect: 102317125251.22575
[2025-10-12 02:18:43] 2025-10-12 06:17:46,354 | INFO     | chi2: 0.08849249941786615
[2025-10-12 02:18:43] 2025-10-12 06:17:46,354 | INFO     | current chi2=0.08849249941786615 (change=33.72763694266897 %)
[2025-10-12 02:18:43] 2025-10-12 06:17:46,354 | INFO     | sum of square deviations: 369281342.5
[2025-10-12 02:18:43] 2025-10-12 06:17:46,355 | INFO     | sum of deviations: -22551984321.0
[2025-10-12 02:18:43] 2025-10-12 06:17:46,355 | INFO     | mean x: 1760246613.5
[2025-10-12 02:18:43] 2025-10-12 06:17:46,355 | INFO     | mean y: 2651296.7358490564
[2025-10-12 02:18:43] 2025-10-12 06:17:46,355 | INFO     | -- intersect: 107500782017.34042
[2025-10-12 02:18:43] 2025-10-12 06:17:46,355 | INFO     | intersect: 107500782017.34042
[2025-10-12 02:18:43] 2025-10-12 06:17:46,356 | INFO     | chi2: 0.08537723250083246
[2025-10-12 02:18:43] 2025-10-12 06:17:46,356 | INFO     | current chi2=0.08537723250083246 (change=3.5203739724010275 %)
[2025-10-12 02:18:43] 2025-10-12 06:17:46,356 | INFO     | left removable region: 30
[2025-10-12 02:18:43] 2025-10-12 06:17:46,356 | INFO     | sum of square deviations: 190403570.0
[2025-10-12 02:18:43] 2025-10-12 06:17:46,357 | INFO     | sum of deviations: -13928130366.0
[2025-10-12 02:18:43] 2025-10-12 06:17:46,357 | INFO     | mean x: 1760246888.0
[2025-10-12 02:18:43] 2025-10-12 06:17:46,357 | INFO     | mean y: 2633435.105882353
[2025-10-12 02:18:43] 2025-10-12 06:17:46,357 | INFO     | -- intersect: 128765703016.25818
[2025-10-12 02:18:43] 2025-10-12 06:17:46,357 | INFO     | intersect: 128765703016.25818
[2025-10-12 02:18:43] 2025-10-12 06:17:46,357 | INFO     | chi2: 0.07562887870750186
[2025-10-12 02:18:43] 2025-10-12 06:17:46,357 | INFO     | -- intersect: 128765703016.25818
[2025-10-12 02:18:43] 2025-10-12 06:17:46,358 | INFO     | current memory leak: -73.15 B/s (using 85 data points, chi2=0.08)
[2025-10-12 02:18:43] 2025-10-12 06:17:46,358 | INFO     | could have reported an average CPU frequency of 1924 MHz (8 samples)
[2025-10-12 02:18:43] 2025-10-12 06:17:46,358 | INFO     | ..............................
[2025-10-12 02:18:43] 2025-10-12 06:17:46,358 | INFO     | . Timing measurements:
[2025-10-12 02:18:43] 2025-10-12 06:17:46,358 | INFO     | . get job = 0 s
[2025-10-12 02:18:43] 2025-10-12 06:17:46,358 | INFO     | . initial setup = 2 s
[2025-10-12 02:18:43] 2025-10-12 06:17:46,359 | INFO     | . payload setup = 8 s
[2025-10-12 02:18:43] 2025-10-12 06:17:46,359 | INFO     | . stage-in = 0 s
[2025-10-12 02:18:43] 2025-10-12 06:17:46,359 | INFO     | . payload execution = 7364 s
[2025-10-12 02:18:43] 2025-10-12 06:17:46,359 | INFO     | . stage-out = 0 s
[2025-10-12 02:18:43] 2025-10-12 06:17:46,359 | INFO     | . log creation = 0 s
[2025-10-12 02:18:43] 2025-10-12 06:17:46,359 | INFO     | ..............................
[2025-10-12 02:18:43] 2025-10-12 06:17:46,451 | INFO     | 
[2025-10-12 02:18:43] 2025-10-12 06:17:46,451 | INFO     | job summary report
[2025-10-12 02:18:43] 2025-10-12 06:17:46,451 | INFO     | --------------------------------------------------
[2025-10-12 02:18:43] 2025-10-12 06:17:46,451 | INFO     | PanDA job id: 6839083895
[2025-10-12 02:18:43] 2025-10-12 06:17:46,451 | INFO     | task id: 46676269
[2025-10-12 02:18:43] 2025-10-12 06:17:46,451 | INFO     | errors: (none)
[2025-10-12 02:18:43] 2025-10-12 06:17:46,452 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 02:18:43] 2025-10-12 06:17:46,452 | INFO     | pilot state: finished 
[2025-10-12 02:18:43] 2025-10-12 06:17:46,452 | INFO     | transexitcode: 0
[2025-10-12 02:18:43] 2025-10-12 06:17:46,452 | INFO     | exeerrorcode: 0
[2025-10-12 02:18:43] 2025-10-12 06:17:46,452 | INFO     | exeerrordiag: 
[2025-10-12 02:18:43] 2025-10-12 06:17:46,452 | INFO     | exitcode: 0
[2025-10-12 02:18:43] 2025-10-12 06:17:46,452 | INFO     | exitmsg: OK
[2025-10-12 02:18:43] 2025-10-12 06:17:46,452 | INFO     | cpuconsumptiontime: 54595 s
[2025-10-12 02:18:43] 2025-10-12 06:17:46,453 | INFO     | nevents: 400
[2025-10-12 02:18:43] 2025-10-12 06:17:46,453 | INFO     | neventsw: 0
[2025-10-12 02:18:43] 2025-10-12 06:17:46,453 | INFO     | pid: 7983
[2025-10-12 02:18:43] 2025-10-12 06:17:46,453 | INFO     | pgrp: 7983
[2025-10-12 02:18:43] 2025-10-12 06:17:46,453 | INFO     | corecount: 8
[2025-10-12 02:18:43] 2025-10-12 06:17:46,453 | INFO     | event service: False
[2025-10-12 02:18:43] 2025-10-12 06:17:46,453 | INFO     | sizes: {0: 2348857, 6: 2349119, 11: 2349147, 7376: 2376508, 7378: 2385562, 7384: 2385700}
[2025-10-12 02:18:43] 2025-10-12 06:17:46,453 | INFO     | --------------------------------------------------
[2025-10-12 02:18:43] 2025-10-12 06:17:46,453 | INFO     | 
[2025-10-12 02:18:43] 2025-10-12 06:17:46,454 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 02:18:43] 2025-10-12 06:17:46,481 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 02:18:43] 2025-10-12 06:17:46,481 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 02:18:43] 2025-10-12 06:17:46,482 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 02:18:43] 2025-10-12 06:17:46,482 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 02:18:43] 2025-10-12 06:17:46,482 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 02:18:43] 2025-10-12 06:17:46,482 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 02:18:43] 2025-10-12 06:17:46,482 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 02:18:43] 2025-10-12 06:17:46,482 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 02:18:43] 2025-10-12 06:17:46,483 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 02:18:43] 2025-10-12 06:17:46,483 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 02:18:43] 2025-10-12 06:17:46,483 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 02:18:43] 2025-10-12 06:17:46,483 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 02:18:43] 2025-10-12 06:17:46,483 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 02:18:43] 2025-10-12 06:17:46,483 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 02:18:43] 2025-10-12 06:17:46,484 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 02:18:43] 2025-10-12 06:17:46,484 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 02:18:43] 2025-10-12 06:17:46,484 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 02:18:43] 2025-10-12 06:17:46,484 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 02:18:43] 2025-10-12 06:17:46,484 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 02:18:43] 2025-10-12 06:17:46,484 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 02:18:43] 2025-10-12 06:17:46,485 | INFO     | job 6839083895 has completed (purged errors)
[2025-10-12 02:18:43] 2025-10-12 06:17:46,485 | INFO     | overall cleanup function is called
[2025-10-12 02:18:43] 2025-10-12 06:17:47,493 | INFO     | --- collectZombieJob: --- 10, [7983]
[2025-10-12 02:18:43] 2025-10-12 06:17:47,494 | INFO     | zombie collector waiting for pid 7983
[2025-10-12 02:18:43] 2025-10-12 06:17:47,494 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 02:18:43] 2025-10-12 06:17:47,494 | INFO     | collected zombie processes
[2025-10-12 02:18:43] 2025-10-12 06:17:47,494 | INFO     | will attempt to kill all subprocesses of pid=7983
[2025-10-12 02:18:43] 2025-10-12 06:17:47,585 | INFO     | process IDs to be killed: [7983] (in reverse order)
[2025-10-12 02:18:43] 2025-10-12 06:17:47,640 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 02:18:43] 2025-10-12 06:17:47,640 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 02:18:43] 2025-10-12 06:17:47,644 | INFO     | did not find any defunct processes belonging to 7983
[2025-10-12 02:18:43] 2025-10-12 06:17:47,647 | INFO     | did not find any defunct processes belonging to 7983
[2025-10-12 02:18:43] 2025-10-12 06:17:47,647 | INFO     | ready for new job
[2025-10-12 02:18:43] 2025-10-12 06:17:47,647 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 02:18:43] 2025-10-12 06:17:47,649 | INFO     | ***************************************
[2025-10-12 02:18:43] 2025-10-12 06:17:47,649 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 02:18:43] 2025-10-12 06:17:47,649 | INFO     | ***************************************
[2025-10-12 02:18:43] 2025-10-12 06:17:47,649 | INFO     | 
[2025-10-12 02:18:43] 2025-10-12 06:17:47,650 | INFO     | architecture information:
[2025-10-12 02:18:43] 2025-10-12 06:17:47,650 | INFO     | executing command: cat /etc/os-release
[2025-10-12 02:18:43] 2025-10-12 06:17:47,669 | INFO     | cat /etc/os-release:
[2025-10-12 02:18:43] NAME="CentOS Linux"
[2025-10-12 02:18:43] VERSION="7 (Core)"
[2025-10-12 02:18:43] ID="centos"
[2025-10-12 02:18:43] ID_LIKE="rhel fedora"
[2025-10-12 02:18:43] VERSION_ID="7"
[2025-10-12 02:18:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 02:18:43] ANSI_COLOR="0;31"
[2025-10-12 02:18:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 02:18:43] HOME_URL="https://www.centos.org/"
[2025-10-12 02:18:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 02:18:43] 
[2025-10-12 02:18:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 02:18:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 02:18:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 02:18:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 02:18:43] 
[2025-10-12 02:18:43] 2025-10-12 06:17:47,669 | INFO     | ***************************************
[2025-10-12 02:18:43] 2025-10-12 06:17:48,172 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 02:18:43] 2025-10-12 06:17:48,192 | INFO     | sufficient remaining disk space (18553503744 B)
[2025-10-12 02:18:43] 2025-10-12 06:17:48,193 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 02:18:43] 2025-10-12 06:17:48,193 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 02:18:43] 2025-10-12 06:17:48,193 | INFO     | update_server=False
[2025-10-12 02:18:43] 2025-10-12 06:17:48,194 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 02:18:43] 2025-10-12 06:17:48,194 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 02:18:43] 2025-10-12 06:17:48,194 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 02:18:43] 2025-10-12 06:17:48,195 | INFO     | aborting loop
[2025-10-12 02:18:43] 2025-10-12 06:17:48,578 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 02:18:43] 2025-10-12 06:17:48,619 | INFO     | all data control threads have been joined
[2025-10-12 02:18:43] 2025-10-12 06:17:48,897 | INFO     | all payload control threads have been joined
[2025-10-12 02:18:43] 2025-10-12 06:17:49,196 | INFO     | [job] retrieve thread has finished
[2025-10-12 02:18:43] 2025-10-12 06:17:49,200 | INFO     | [job] job monitor thread has finished
[2025-10-12 02:18:43] 2025-10-12 06:17:49,201 | INFO     | [job] queue monitor thread has finished
[2025-10-12 02:18:43] 2025-10-12 06:17:49,413 | INFO     | all job control threads have been joined
[2025-10-12 02:18:43] 2025-10-12 06:17:49,624 | INFO     | [data] control thread has finished
[2025-10-12 02:18:43] 2025-10-12 06:17:49,637 | INFO     | [job] validate thread has finished
[2025-10-12 02:18:43] 2025-10-12 06:17:49,641 | INFO     | [data] copytool_in thread has finished
[2025-10-12 02:18:43] 2025-10-12 06:17:49,895 | INFO     | [payload] validate_post thread has finished
[2025-10-12 02:18:43] 2025-10-12 06:17:49,902 | INFO     | [payload] control thread has finished
[2025-10-12 02:18:43] 2025-10-12 06:17:49,967 | INFO     | [payload] failed_post thread has finished
[2025-10-12 02:18:43] 2025-10-12 06:17:49,997 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 02:18:43] 2025-10-12 06:17:50,293 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 02:18:43] 2025-10-12 06:17:50,340 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 02:18:43] 2025-10-12 06:17:50,351 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 02:18:43] 2025-10-12 06:17:50,418 | INFO     | [job] control thread has finished
[2025-10-12 02:18:43] 2025-10-12 06:17:50,582 | INFO     | [data] copytool_out thread has finished
[2025-10-12 02:18:43] 2025-10-12 06:17:51,300 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 02:18:43] 2025-10-12 06:17:55,305 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 02:18:43] 2025-10-12 06:18:18,472 | INFO     | PID=1475 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-12 02:18:43] 2025-10-12 06:18:18,474 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 02:18:43] 2025-10-12 06:18:18,474 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 02:18:43] 2025-10-12 06:18:18,474 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 02:18:43] 2025-10-12 06:18:37,044 | INFO     | [monitor] cgroup control has ended
[2025-10-12 02:18:43] 2025-10-12 06:18:38,542 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140682405644096)>', '<ExcThread(monitor, started 140681360164608)>']
[2025-10-12 02:18:43] 2025-10-12 06:18:38,559 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 02:18:43] 2025-10-12 06:18:38,559 | INFO     | [monitor] control thread has ended
[2025-10-12 02:18:43] 2025-10-12 06:18:43,545 | INFO     | all workflow threads have been joined
[2025-10-12 02:18:43] 2025-10-12 06:18:43,546 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 02:18:43] 2025-10-12 06:18:43,546 | INFO     | traces error code: 0
[2025-10-12 02:18:43] 2025-10-12 06:18:43,547 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 02:18:43] 2025-10-12 06:18:43,669 [wrapper] ==== pilot stdout END ====
[2025-10-12 02:18:43] 2025-10-12 06:18:43,674 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 02:18:43] 2025-10-12 06:18:43,678 [wrapper] pilotpid: 1475
[2025-10-12 02:18:43] 2025-10-12 06:18:43,683 [wrapper] Pilot exit status: 0
[2025-10-12 02:18:43] 2025-10-12 06:18:43,702 [wrapper] pandaids: 6839083895
[2025-10-12 02:18:43] 2025-10-12 06:18:43,751 [wrapper] cleanup supervisor_pilot  4941 1476
[2025-10-12 02:18:43] 2025-10-12 06:18:43,757 [wrapper] Test setup, not cleaning
[2025-10-12 02:18:43] 2025-10-12 06:18:43,761 [wrapper] apfmon messages muted
[2025-10-12 02:18:43] 2025-10-12 06:18:43,766 [wrapper] ==== wrapper stdout END ====
[2025-10-12 02:18:43] 2025-10-12 06:18:43,771 [wrapper] ==== wrapper stderr END ====
[2025-10-12 02:18:43]  *** Error codes and diagnostics ***
[2025-10-12 02:18:43]     "exeErrorCode": 0,
[2025-10-12 02:18:43]     "exeErrorDiag": "",
[2025-10-12 02:18:43]     "pilotErrorCode": 0,
[2025-10-12 02:18:43]     "pilotErrorDiag": "",
[2025-10-12 02:18:43]  *** Listing of results directory ***
[2025-10-12 02:18:43] total 413380
[2025-10-12 02:18:43] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 18:51 pilot3.tar.gz
[2025-10-12 02:18:43] -rwx------ 1 boincer umatlas     36292 Oct 11 19:05 runpilot2-wrapper.sh
[2025-10-12 02:18:43] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 19:05 queuedata.json
[2025-10-12 02:18:43] -rw-r--r-- 1 boincer umatlas       100 Oct 12 00:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 02:18:43] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 00:14 run_atlas
[2025-10-12 02:18:43] -rw-r--r-- 1 boincer umatlas       105 Oct 12 00:14 job.xml
[2025-10-12 02:18:43] -rw-r--r-- 2 boincer umatlas 220641972 Oct 12 00:14 EVNT.46676267._002687.pool.root.1
[2025-10-12 02:18:43] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 00:14 start_atlas.sh
[2025-10-12 02:18:43] drwxrwx--x 2 boincer umatlas      4096 Oct 12 00:14 shared
[2025-10-12 02:18:43] -rw-r--r-- 2 boincer umatlas    569683 Oct 12 00:14 input.tar.gz
[2025-10-12 02:18:43] -rw-r--r-- 1 boincer umatlas         0 Oct 12 00:14 boinc_lockfile
[2025-10-12 02:18:43] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 00:14 pandaJob.out
[2025-10-12 02:18:43] -rw------- 1 boincer umatlas    975512 Oct 12 00:14 agis_schedconf.cvmfs.json
[2025-10-12 02:18:43] -rw------- 1 boincer umatlas   1560580 Oct 12 00:14 agis_ddmendpoints.agis.ALL.json
[2025-10-12 02:18:43] drwx------ 5 boincer umatlas      4096 Oct 12 00:14 pilot3
[2025-10-12 02:18:43] -rw------- 1 boincer umatlas 195904208 Oct 12 02:17 HITS.46676269._066659.pool.root.1
[2025-10-12 02:18:43] -rw-r--r-- 1 boincer umatlas       529 Oct 12 02:17 boinc_task_state.xml
[2025-10-12 02:18:43] -rw------- 1 boincer umatlas      1051 Oct 12 02:17 memory_monitor_summary.json
[2025-10-12 02:18:43] -rw------- 1 boincer umatlas    382692 Oct 12 02:17 log.46676269._066659.job.log.tgz.1
[2025-10-12 02:18:43] -rw------- 1 boincer umatlas      7853 Oct 12 02:17 heartbeat.json
[2025-10-12 02:18:43] -rw-r--r-- 1 boincer umatlas      5909 Oct 12 02:18 init_data.xml
[2025-10-12 02:18:43] -rw------- 1 boincer umatlas        95 Oct 12 02:18 pilot_heartbeat.json
[2025-10-12 02:18:43] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 02:18 boinc_mmap_file
[2025-10-12 02:18:43] -rw-r--r-- 1 boincer umatlas        27 Oct 12 02:18 wrapper_checkpoint.txt
[2025-10-12 02:18:43] -rw------- 1 boincer umatlas      4745 Oct 12 02:18 pilotlog.txt
[2025-10-12 02:18:43] -rw------- 1 boincer umatlas   1042985 Oct 12 02:18 log.46676269._066659.job.log.1
[2025-10-12 02:18:43] -rw------- 1 boincer umatlas       357 Oct 12 02:18 output.list
[2025-10-12 02:18:43] -rw-r--r-- 1 boincer umatlas       620 Oct 12 02:18 runtime_log
[2025-10-12 02:18:43] -rw------- 1 boincer umatlas   1443840 Oct 12 02:18 result.tar.gz
[2025-10-12 02:18:43] -rw-r--r-- 1 boincer umatlas      8703 Oct 12 02:18 runtime_log.err
[2025-10-12 02:18:43] -rw------- 1 boincer umatlas       660 Oct 12 02:18 EyyLDmNpxR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmClSMDmDHpxGm.diag
[2025-10-12 02:18:43] -rw-r--r-- 1 boincer umatlas     20836 Oct 12 02:18 stderr.txt
[2025-10-12 02:18:43] HITS file was successfully produced:
[2025-10-12 02:18:43] -rw------- 1 boincer umatlas 195904208 Oct 12 02:17 shared/HITS.pool.root.1
[2025-10-12 02:18:43]  *** Contents of shared directory: ***
[2025-10-12 02:18:43] total 408780
[2025-10-12 02:18:43] -rw-r--r-- 2 boincer umatlas 220641972 Oct 12 00:14 ATLAS.root_0
[2025-10-12 02:18:43] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 00:14 start_atlas.sh
[2025-10-12 02:18:43] -rw-r--r-- 2 boincer umatlas    569683 Oct 12 00:14 input.tar.gz
[2025-10-12 02:18:43] -rw------- 1 boincer umatlas 195904208 Oct 12 02:17 HITS.pool.root.1
[2025-10-12 02:18:43] -rw------- 1 boincer umatlas   1443840 Oct 12 02:18 result.tar.gz
02:18:45 (30140): run_atlas exited; CPU time 54610.869199
02:18:45 (30140): called boinc_finish(0)

</stderr_txt>
]]>

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