Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:10:17 (2371746): wrapper (7.7.26015): starting
00:10:17 (2371746): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 00:10:17] Arguments: --nthreads 8
[2025-10-12 00:10:17] Threads: 8
[2025-10-12 00:10:17] Checking for CVMFS
[2025-10-12 00:10:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 00:10:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 00:10:19] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 00:10:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 00:10:21] 2.13.2.0 1588368 55547 328932 151607 2 193 19663443 39288833 10023 16776704 0 62422249 99.645 55685551 33067 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 00:10:21] CVMFS is ok
[2025-10-12 00:10:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 00:10:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 00:10:21] Further information can be found at the LHC@home message board.
[2025-10-12 00:10:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 00:10:21] Checking for apptainer binary...
[2025-10-12 00:10:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 00:10:21] Running /usr/bin/apptainer --version
[2025-10-12 00:10:21] apptainer version 1.4.3-1.el9
[2025-10-12 00:10:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 00:10:22] c-210-6.aglt2.org
[2025-10-12 00:10:22] apptainer works
[2025-10-12 00:10:22] Set ATHENA_PROC_NUMBER=8
[2025-10-12 00:10:22] Set ATHENA_CORE_NUMBER=8
[2025-10-12 00:10:22] Starting ATLAS job with PandaID=6838990916
[2025-10-12 00:10:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
07:12:40 (2964548): wrapper (7.7.26015): starting
07:12:40 (2964548): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 07:12:40] Arguments: --nthreads 8
[2025-10-12 07:12:40] Threads: 8
[2025-10-12 07:12:40] This job has been restarted, cleaning up previous attempt
[2025-10-12 07:12:40] Checking for CVMFS
[2025-10-12 07:12:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 07:12:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 07:12:40] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 07:12:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 07:12:42] 2.13.2.0 1588368 55970 326952 151618 0 13 20089935 39288833 7952 16776704 0 62779389 99.647 55700189 33066 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 07:12:42] CVMFS is ok
[2025-10-12 07:12:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 07:12:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 07:12:42] Further information can be found at the LHC@home message board.
[2025-10-12 07:12:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 07:12:42] Checking for apptainer binary...
[2025-10-12 07:12:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 07:12:42] Running /usr/bin/apptainer --version
[2025-10-12 07:12:42] apptainer version 1.4.3-1.el9
[2025-10-12 07:12:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 07:12:43] c-210-6.aglt2.org
[2025-10-12 07:12:43] apptainer works
[2025-10-12 07:12:43] Set ATHENA_PROC_NUMBER=8
[2025-10-12 07:12:43] Set ATHENA_CORE_NUMBER=8
[2025-10-12 07:12:43] Starting ATLAS job with PandaID=6838990916
[2025-10-12 07:12:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 19:20:53]  *** The last 200 lines of the pilot log: ***
[2025-10-12 19:20:53] 2025-10-12 23:20:19,631 | INFO     | fitting pss+swap vs Time
[2025-10-12 19:20:53] 2025-10-12 23:20:19,633 | INFO     | sum of square deviations: 112863226390.25923
[2025-10-12 19:20:53] 2025-10-12 23:20:19,648 | INFO     | sum of deviations: -51785548088.149796
[2025-10-12 19:20:53] 2025-10-12 23:20:19,649 | INFO     | mean x: 1760289409.967787
[2025-10-12 19:20:53] 2025-10-12 23:20:19,649 | INFO     | mean y: 2553493.6456582635
[2025-10-12 19:20:53] 2025-10-12 23:20:19,649 | INFO     | -- intersect: 810235099.1115738
[2025-10-12 19:20:53] 2025-10-12 23:20:19,650 | INFO     | intersect: 810235099.1115738
[2025-10-12 19:20:53] 2025-10-12 23:20:19,652 | INFO     | chi2: 2.6204982209631074
[2025-10-12 19:20:53] 2025-10-12 23:20:19,653 | INFO     | sum of square deviations: 110508925126.91104
[2025-10-12 19:20:53] 2025-10-12 23:20:19,668 | INFO     | sum of deviations: -6405118477.770079
[2025-10-12 19:20:53] 2025-10-12 23:20:19,669 | INFO     | mean x: 1760289257.4781382
[2025-10-12 19:20:53] 2025-10-12 23:20:19,669 | INFO     | mean y: 2556416.143864598
[2025-10-12 19:20:53] 2025-10-12 23:20:19,669 | INFO     | -- intersect: 104583118.84090993
[2025-10-12 19:20:53] 2025-10-12 23:20:19,669 | INFO     | intersect: 104583118.84090993
[2025-10-12 19:20:53] 2025-10-12 23:20:19,670 | INFO     | chi2: 1.9354520642962056
[2025-10-12 19:20:53] 2025-10-12 23:20:19,671 | INFO     | current chi2=1.9354520642962056 (change=26.141828725040227 %)
[2025-10-12 19:20:53] 2025-10-12 23:20:19,672 | INFO     | sum of square deviations: 108187601225.90898
[2025-10-12 19:20:53] 2025-10-12 23:20:19,702 | INFO     | sum of deviations: -7373296426.500017
[2025-10-12 19:20:53] 2025-10-12 23:20:19,765 | INFO     | mean x: 1760289104.9886363
[2025-10-12 19:20:53] 2025-10-12 23:20:19,765 | INFO     | mean y: 2556352.5625
[2025-10-12 19:20:53] 2025-10-12 23:20:19,765 | INFO     | -- intersect: 122525121.81469557
[2025-10-12 19:20:53] 2025-10-12 23:20:19,765 | INFO     | intersect: 122525121.81469557
[2025-10-12 19:20:53] 2025-10-12 23:20:19,766 | INFO     | chi2: 1.9351549950160865
[2025-10-12 19:20:53] 2025-10-12 23:20:19,766 | INFO     | current chi2=1.9351549950160865 (change=0.015348831707036515 %)
[2025-10-12 19:20:53] 2025-10-12 23:20:19,766 | INFO     | right removable region: 703
[2025-10-12 19:20:53] 2025-10-12 23:20:19,767 | INFO     | sum of square deviations: 110508285846.91104
[2025-10-12 19:20:53] 2025-10-12 23:20:19,783 | INFO     | sum of deviations: -185523598244.20892
[2025-10-12 19:20:53] 2025-10-12 23:20:19,783 | INFO     | mean x: 1760289562.4781382
[2025-10-12 19:20:53] 2025-10-12 23:20:19,783 | INFO     | mean y: 2562133.599435825
[2025-10-12 19:20:53] 2025-10-12 23:20:19,783 | INFO     | -- intersect: 2957772696.136606
[2025-10-12 19:20:53] 2025-10-12 23:20:19,783 | INFO     | intersect: 2957772696.136606
[2025-10-12 19:20:53] 2025-10-12 23:20:19,785 | INFO     | chi2: 0.9513398118601756
[2025-10-12 19:20:53] 2025-10-12 23:20:19,785 | INFO     | current chi2=0.9513398118601756 (change=63.69622370853848 %)
[2025-10-12 19:20:53] 2025-10-12 23:20:19,786 | INFO     | sum of square deviations: 108186322665.90898
[2025-10-12 19:20:53] 2025-10-12 23:20:19,800 | INFO     | sum of deviations: -187075301899.7271
[2025-10-12 19:20:53] 2025-10-12 23:20:19,801 | INFO     | mean x: 1760289714.9886363
[2025-10-12 19:20:53] 2025-10-12 23:20:19,801 | INFO     | mean y: 2562231.784090909
[2025-10-12 19:20:53] 2025-10-12 23:20:19,801 | INFO     | -- intersect: 3046447278.874733
[2025-10-12 19:20:53] 2025-10-12 23:20:19,801 | INFO     | intersect: 3046447278.874733
[2025-10-12 19:20:53] 2025-10-12 23:20:19,802 | INFO     | chi2: 0.9338189106703928
[2025-10-12 19:20:53] 2025-10-12 23:20:19,802 | INFO     | current chi2=0.9338189106703928 (change=1.8417079755680335 %)
[2025-10-12 19:20:53] 2025-10-12 23:20:19,802 | INFO     | left removable region: 20
[2025-10-12 19:20:53] 2025-10-12 23:20:19,803 | INFO     | sum of square deviations: 98790348047.94124
[2025-10-12 19:20:53] 2025-10-12 23:20:19,817 | INFO     | sum of deviations: -106243958395.91924
[2025-10-12 19:20:53] 2025-10-12 23:20:19,817 | INFO     | mean x: 1760289684.5344071
[2025-10-12 19:20:53] 2025-10-12 23:20:19,817 | INFO     | mean y: 2562815.890190337
[2025-10-12 19:20:53] 2025-10-12 23:20:19,818 | INFO     | -- intersect: 1895664193.7462711
[2025-10-12 19:20:53] 2025-10-12 23:20:19,818 | INFO     | intersect: 1895664193.7462711
[2025-10-12 19:20:53] 2025-10-12 23:20:19,819 | INFO     | chi2: 0.21203061569036435
[2025-10-12 19:20:53] 2025-10-12 23:20:19,819 | INFO     | -- intersect: 1895664193.7462711
[2025-10-12 19:20:53] 2025-10-12 23:20:19,819 | INFO     | current memory leak: -1.08 B/s (using 683 data points, chi2=0.21)
[2025-10-12 19:20:53] 2025-10-12 23:20:19,820 | INFO     | could have reported an average CPU frequency of 2593 MHz (27 samples)
[2025-10-12 19:20:53] 2025-10-12 23:20:19,821 | INFO     | ..............................
[2025-10-12 19:20:53] 2025-10-12 23:20:19,821 | INFO     | . Timing measurements:
[2025-10-12 19:20:53] 2025-10-12 23:20:19,821 | INFO     | . get job = 0 s
[2025-10-12 19:20:53] 2025-10-12 23:20:19,821 | INFO     | . initial setup = 5 s
[2025-10-12 19:20:53] 2025-10-12 23:20:19,821 | INFO     | . payload setup = 13 s
[2025-10-12 19:20:53] 2025-10-12 23:20:19,821 | INFO     | . stage-in = 0 s
[2025-10-12 19:20:53] 2025-10-12 23:20:19,821 | INFO     | . payload execution = 43534 s
[2025-10-12 19:20:53] 2025-10-12 23:20:19,821 | INFO     | . stage-out = 4 s
[2025-10-12 19:20:53] 2025-10-12 23:20:19,821 | INFO     | . log creation = 1 s
[2025-10-12 19:20:53] 2025-10-12 23:20:19,822 | INFO     | ..............................
[2025-10-12 19:20:53] 2025-10-12 23:20:19,943 | INFO     | 
[2025-10-12 19:20:53] 2025-10-12 23:20:19,944 | INFO     | job summary report
[2025-10-12 19:20:53] 2025-10-12 23:20:19,944 | INFO     | --------------------------------------------------
[2025-10-12 19:20:53] 2025-10-12 23:20:19,944 | INFO     | PanDA job id: 6838990916
[2025-10-12 19:20:53] 2025-10-12 23:20:19,944 | INFO     | task id: 46676269
[2025-10-12 19:20:53] 2025-10-12 23:20:19,944 | INFO     | errors: (none)
[2025-10-12 19:20:53] 2025-10-12 23:20:19,944 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 19:20:53] 2025-10-12 23:20:19,944 | INFO     | pilot state: finished 
[2025-10-12 19:20:53] 2025-10-12 23:20:19,945 | INFO     | transexitcode: 0
[2025-10-12 19:20:53] 2025-10-12 23:20:19,945 | INFO     | exeerrorcode: 0
[2025-10-12 19:20:53] 2025-10-12 23:20:19,945 | INFO     | exeerrordiag: 
[2025-10-12 19:20:53] 2025-10-12 23:20:19,945 | INFO     | exitcode: 0
[2025-10-12 19:20:53] 2025-10-12 23:20:19,945 | INFO     | exitmsg: OK
[2025-10-12 19:20:53] 2025-10-12 23:20:19,945 | INFO     | cpuconsumptiontime: 54163 s
[2025-10-12 19:20:53] 2025-10-12 23:20:19,945 | INFO     | nevents: 400
[2025-10-12 19:20:53] 2025-10-12 23:20:19,945 | INFO     | neventsw: 0
[2025-10-12 19:20:53] 2025-10-12 23:20:19,945 | INFO     | pid: 2984962
[2025-10-12 19:20:53] 2025-10-12 23:20:19,945 | INFO     | pgrp: 2984962
[2025-10-12 19:20:53] 2025-10-12 23:20:19,946 | INFO     | corecount: 8
[2025-10-12 19:20:53] 2025-10-12 23:20:19,946 | INFO     | event service: False
[2025-10-12 19:20:53] 2025-10-12 23:20:19,946 | INFO     | sizes: {0: 2348029, 1: 2348630, 2: 2348799, 3: 2348941, 14: 2348941, 15: 2349231, 25: 2349387, 43552: 2393710, 43557: 2402708, 43560: 2402764, 43591: 2402958}
[2025-10-12 19:20:53] 2025-10-12 23:20:19,946 | INFO     | --------------------------------------------------
[2025-10-12 19:20:53] 2025-10-12 23:20:19,946 | INFO     | 
[2025-10-12 19:20:53] 2025-10-12 23:20:19,946 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-12 19:20:53] 2025-10-12 23:20:19,970 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 19:20:53] 2025-10-12 23:20:19,970 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 19:20:53] 2025-10-12 23:20:19,971 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 19:20:53] 2025-10-12 23:20:19,971 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 19:20:53] 2025-10-12 23:20:19,971 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 19:20:53] 2025-10-12 23:20:19,971 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 19:20:53] 2025-10-12 23:20:19,971 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 19:20:53] 2025-10-12 23:20:19,971 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 19:20:53] 2025-10-12 23:20:19,971 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 19:20:53] 2025-10-12 23:20:19,971 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 19:20:53] 2025-10-12 23:20:19,971 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 19:20:53] 2025-10-12 23:20:19,972 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 19:20:53] 2025-10-12 23:20:19,972 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 19:20:53] 2025-10-12 23:20:19,972 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 19:20:53] 2025-10-12 23:20:19,972 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 19:20:53] 2025-10-12 23:20:19,972 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 19:20:53] 2025-10-12 23:20:19,972 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 19:20:53] 2025-10-12 23:20:19,972 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 19:20:53] 2025-10-12 23:20:19,972 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 19:20:53] 2025-10-12 23:20:19,973 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 19:20:53] 2025-10-12 23:20:19,973 | INFO     | job 6838990916 has completed (purged errors)
[2025-10-12 19:20:53] 2025-10-12 23:20:19,973 | INFO     | overall cleanup function is called
[2025-10-12 19:20:53] 2025-10-12 23:20:20,983 | INFO     | --- collectZombieJob: --- 10, [2984962]
[2025-10-12 19:20:53] 2025-10-12 23:20:20,983 | INFO     | zombie collector waiting for pid 2984962
[2025-10-12 19:20:53] 2025-10-12 23:20:20,984 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 19:20:53] 2025-10-12 23:20:20,984 | INFO     | collected zombie processes
[2025-10-12 19:20:53] 2025-10-12 23:20:20,984 | INFO     | will attempt to kill all subprocesses of pid=2984962
[2025-10-12 19:20:53] 2025-10-12 23:20:21,442 | INFO     | process IDs to be killed: [2984962] (in reverse order)
[2025-10-12 19:20:53] 2025-10-12 23:20:21,864 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 19:20:53] 2025-10-12 23:20:21,864 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 19:20:53] 2025-10-12 23:20:21,882 | INFO     | did not find any defunct processes belonging to 2984962
[2025-10-12 19:20:53] 2025-10-12 23:20:21,898 | INFO     | did not find any defunct processes belonging to 2984962
[2025-10-12 19:20:53] 2025-10-12 23:20:21,898 | INFO     | ready for new job
[2025-10-12 19:20:53] 2025-10-12 23:20:21,898 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 19:20:53] 2025-10-12 23:20:21,906 | INFO     | ***************************************
[2025-10-12 19:20:53] 2025-10-12 23:20:21,906 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 19:20:53] 2025-10-12 23:20:21,906 | INFO     | ***************************************
[2025-10-12 19:20:53] 2025-10-12 23:20:21,906 | INFO     | 
[2025-10-12 19:20:53] 2025-10-12 23:20:21,914 | INFO     | architecture information:
[2025-10-12 19:20:53] 2025-10-12 23:20:21,918 | INFO     | executing command: cat /etc/os-release
[2025-10-12 19:20:53] 2025-10-12 23:20:22,165 | INFO     | cat /etc/os-release:
[2025-10-12 19:20:53] NAME="CentOS Linux"
[2025-10-12 19:20:53] VERSION="7 (Core)"
[2025-10-12 19:20:53] ID="centos"
[2025-10-12 19:20:53] ID_LIKE="rhel fedora"
[2025-10-12 19:20:53] VERSION_ID="7"
[2025-10-12 19:20:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 19:20:53] ANSI_COLOR="0;31"
[2025-10-12 19:20:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 19:20:53] HOME_URL="https://www.centos.org/"
[2025-10-12 19:20:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 19:20:53] 
[2025-10-12 19:20:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 19:20:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 19:20:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 19:20:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 19:20:53] 
[2025-10-12 19:20:53] 2025-10-12 23:20:22,165 | INFO     | ***************************************
[2025-10-12 19:20:53] 2025-10-12 23:20:22,668 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-12 19:20:53] 2025-10-12 23:20:22,799 | INFO     | sufficient remaining disk space (53019148288 B)
[2025-10-12 19:20:53] 2025-10-12 23:20:22,799 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 19:20:53] 2025-10-12 23:20:22,799 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 19:20:53] 2025-10-12 23:20:22,800 | INFO     | update_server=False
[2025-10-12 19:20:53] 2025-10-12 23:20:22,800 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 19:20:53] 2025-10-12 23:20:22,800 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 19:20:53] 2025-10-12 23:20:22,885 | INFO     | all data control threads have been joined
[2025-10-12 19:20:53] 2025-10-12 23:20:23,016 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 19:20:53] 2025-10-12 23:20:23,018 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 19:20:53] 2025-10-12 23:20:23,018 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 19:20:53] 2025-10-12 23:20:23,019 | INFO     | will abort loop
[2025-10-12 19:20:53] 2025-10-12 23:20:23,805 | INFO     | [job] retrieve thread has finished
[2025-10-12 19:20:53] 2025-10-12 23:20:23,891 | INFO     | [data] control thread has finished
[2025-10-12 19:20:53] 2025-10-12 23:20:23,956 | INFO     | [job] validate thread has finished
[2025-10-12 19:20:53] 2025-10-12 23:20:23,988 | INFO     | [payload] validate_post thread has finished
[2025-10-12 19:20:53] 2025-10-12 23:20:24,024 | INFO     | [job] job monitor thread has finished
[2025-10-12 19:20:53] 2025-10-12 23:20:24,103 | INFO     | all job control threads have been joined
[2025-10-12 19:20:53] 2025-10-12 23:20:24,220 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 19:20:53] 2025-10-12 23:20:24,250 | INFO     | all payload control threads have been joined
[2025-10-12 19:20:53] 2025-10-12 23:20:24,264 | INFO     | [payload] failed_post thread has finished
[2025-10-12 19:20:53] 2025-10-12 23:20:24,287 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 19:20:53] 2025-10-12 23:20:24,290 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 19:20:53] 2025-10-12 23:20:24,378 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 19:20:53] 2025-10-12 23:20:24,685 | INFO     | [data] copytool_in thread has finished
[2025-10-12 19:20:53] 2025-10-12 23:20:24,958 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 19:20:53] 2025-10-12 23:20:25,057 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 19:20:53] 2025-10-12 23:20:25,109 | INFO     | [job] control thread has finished
[2025-10-12 19:20:53] 2025-10-12 23:20:25,256 | INFO     | [payload] control thread has finished
[2025-10-12 19:20:53] 2025-10-12 23:20:25,964 | INFO     | [job] queue monitor thread has finished
[2025-10-12 19:20:53] 2025-10-12 23:20:26,227 | INFO     | [data] copytool_out thread has finished
[2025-10-12 19:20:53] 2025-10-12 23:20:26,809 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 19:20:53] 2025-10-12 23:20:31,197 | INFO     | [monitor] cgroup control has ended
[2025-10-12 19:20:53] 2025-10-12 23:20:32,964 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140016219273024)>', '<ExcThread(monitor, started 140015564732160)>']
[2025-10-12 19:20:53] 2025-10-12 23:20:37,996 | INFO     | all workflow threads have been joined
[2025-10-12 19:20:53] 2025-10-12 23:20:37,996 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 19:20:53] 2025-10-12 23:20:38,060 | INFO     | traces error code: 0
[2025-10-12 19:20:53] 2025-10-12 23:20:38,061 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 19:20:53] 2025-10-12 23:20:51,784 | INFO     | PID=2971882 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 19:20:53] 2025-10-12 23:20:51,785 | INFO     | .. there are 7 such processes running
[2025-10-12 19:20:53] 2025-10-12 23:20:51,785 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 19:20:53] 2025-10-12 23:20:51,785 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 19:20:53] 2025-10-12 23:20:51,785 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 19:20:53] 2025-10-12 23:20:51,785 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 19:20:53] 2025-10-12 23:20:51,786 | CRITICAL | thread 'MainThread' is not alive
[2025-10-12 19:20:53] 2025-10-12 23:20:51,786 | INFO     | [monitor] control thread has ended
[2025-10-12 19:20:53] 2025-10-12 23:20:51,979 [wrapper] ==== pilot stdout END ====
[2025-10-12 19:20:53] 2025-10-12 23:20:51,995 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 19:20:53] 2025-10-12 23:20:52,044 [wrapper] pilotpid: 2971882
[2025-10-12 19:20:53] 2025-10-12 23:20:52,081 [wrapper] Pilot exit status: 0
[2025-10-12 19:20:53] 2025-10-12 23:20:52,199 [wrapper] pandaids: 6838990916 6838990916
[2025-10-12 19:20:53] 2025-10-12 23:20:52,452 [wrapper] cleanup supervisor_pilot 3965227 2971883
[2025-10-12 19:20:53] 2025-10-12 23:20:52,463 [wrapper] Test setup, not cleaning
[2025-10-12 19:20:53] 2025-10-12 23:20:52,478 [wrapper] apfmon messages muted
[2025-10-12 19:20:53] 2025-10-12 23:20:52,498 [wrapper] ==== wrapper stdout END ====
[2025-10-12 19:20:53] 2025-10-12 23:20:52,502 [wrapper] ==== wrapper stderr END ====
[2025-10-12 19:20:53]  *** Error codes and diagnostics ***
[2025-10-12 19:20:53]     "exeErrorCode": 0,
[2025-10-12 19:20:53]     "exeErrorDiag": "",
[2025-10-12 19:20:53]     "pilotErrorCode": 0,
[2025-10-12 19:20:53]     "pilotErrorDiag": "",
[2025-10-12 19:20:53]  *** Listing of results directory ***
[2025-10-12 19:20:53] total 633240
[2025-10-12 19:20:53] drwx------. 5 boincer umatlas      4096 Oct  7 03:00 pilot3
[2025-10-12 19:20:53] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 18:51 pilot3.tar.gz
[2025-10-12 19:20:53] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 18:57 queuedata.json
[2025-10-12 19:20:53] -rwx------. 1 boincer umatlas     36292 Oct 11 18:58 runpilot2-wrapper.sh
[2025-10-12 19:20:53] -rw-r--r--. 1 boincer umatlas       100 Oct 12 00:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 19:20:53] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 00:10 run_atlas
[2025-10-12 19:20:53] -rw-r--r--. 1 boincer umatlas       105 Oct 12 00:10 job.xml
[2025-10-12 19:20:53] -rw-r--r--. 3 boincer umatlas 220826484 Oct 12 00:10 EVNT.46676267._002675.pool.root.1
[2025-10-12 19:20:53] -rw-r--r--. 3 boincer umatlas 220826484 Oct 12 00:10 ATLAS.root_0
[2025-10-12 19:20:53] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 00:10 shared
[2025-10-12 19:20:53] -rw-r--r--. 2 boincer umatlas    569682 Oct 12 00:10 input.tar.gz
[2025-10-12 19:20:53] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:10 start_atlas.sh
[2025-10-12 19:20:53] -rw-r--r--. 1 boincer umatlas         0 Oct 12 00:10 boinc_lockfile
[2025-10-12 19:20:53] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 07:12 pandaJob.out
[2025-10-12 19:20:53] -rw-------. 1 boincer umatlas    975520 Oct 12 07:13 agis_schedconf.cvmfs.json
[2025-10-12 19:20:53] -rw-------. 1 boincer umatlas 190574050 Oct 12 19:18 HITS.46676269._066405.pool.root.1
[2025-10-12 19:20:53] -rw-r--r--. 1 boincer umatlas       531 Oct 12 19:18 boinc_task_state.xml
[2025-10-12 19:20:53] -rw-r--r--. 1 boincer umatlas      6660 Oct 12 19:19 init_data.xml
[2025-10-12 19:20:53] -rw-------. 1 boincer umatlas      1051 Oct 12 19:19 memory_monitor_summary.json
[2025-10-12 19:20:53] -rw-------. 1 boincer umatlas   1560580 Oct 12 19:19 agis_ddmendpoints.agis.ALL.json
[2025-10-12 19:20:53] -rw-------. 1 boincer umatlas    827697 Oct 12 19:19 log.46676269._066405.job.log.tgz.1
[2025-10-12 19:20:53] -rw-------. 1 boincer umatlas        96 Oct 12 19:19 pilot_heartbeat.json
[2025-10-12 19:20:53] -rw-------. 1 boincer umatlas      7845 Oct 12 19:20 heartbeat.json
[2025-10-12 19:20:53] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 19:20 boinc_mmap_file
[2025-10-12 19:20:53] -rw-r--r--. 1 boincer umatlas        28 Oct 12 19:20 wrapper_checkpoint.txt
[2025-10-12 19:20:53] -rw-------. 1 boincer umatlas       892 Oct 12 19:20 pilotlog.txt
[2025-10-12 19:20:53] -rw-------. 1 boincer umatlas   5326442 Oct 12 19:20 log.46676269._066405.job.log.1
[2025-10-12 19:20:53] -rw-------. 1 boincer umatlas       357 Oct 12 19:20 output.list
[2025-10-12 19:20:53] -rw-r--r--. 1 boincer umatlas       620 Oct 12 19:20 runtime_log
[2025-10-12 19:20:53] -rw-------. 1 boincer umatlas   6174720 Oct 12 19:20 result.tar.gz
[2025-10-12 19:20:53] -rw-r--r--. 1 boincer umatlas      8784 Oct 12 19:20 runtime_log.err
[2025-10-12 19:20:53] -rw-------. 1 boincer umatlas       786 Oct 12 19:20 4VZKDmMjxR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmijSMDmatYpEm.diag
[2025-10-12 19:20:53] -rw-r--r--. 1 boincer umatlas     23208 Oct 12 19:20 stderr.txt
[2025-10-12 19:20:53] HITS file was successfully produced:
[2025-10-12 19:20:53] -rw-------. 1 boincer umatlas 190574050 Oct 12 19:18 shared/HITS.pool.root.1
[2025-10-12 19:20:53]  *** Contents of shared directory: ***
[2025-10-12 19:20:53] total 408372
[2025-10-12 19:20:53] -rw-r--r--. 3 boincer umatlas 220826484 Oct 12 00:10 ATLAS.root_0
[2025-10-12 19:20:53] -rw-r--r--. 2 boincer umatlas    569682 Oct 12 00:10 input.tar.gz
[2025-10-12 19:20:53] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:10 start_atlas.sh
[2025-10-12 19:20:53] -rw-------. 1 boincer umatlas 190574050 Oct 12 19:18 HITS.pool.root.1
[2025-10-12 19:20:53] -rw-------. 1 boincer umatlas   6174720 Oct 12 19:20 result.tar.gz
19:20:54 (2964548): run_atlas exited; CPU time 55259.437060
19:20:54 (2964548): called boinc_finish(0)

</stderr_txt>
]]>

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