Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:05:48 (379650): wrapper (7.7.26015): starting
00:05:48 (379650): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 00:05:48] Arguments: --nthreads 8
[2025-10-12 00:05:48] Threads: 8
[2025-10-12 00:05:48] Checking for CVMFS
[2025-10-12 00:05:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 00:05:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 00:05:48] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 00:05:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 00:05:48] 2.13.2.0 8406 36003 82280 151607 3 16 23426062 40960000 29383 16776704 0 226594920 99.852 81516258 49367 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 00:05:48] CVMFS is ok
[2025-10-12 00:05:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 00:05:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 00:05:48] Further information can be found at the LHC@home message board.
[2025-10-12 00:05:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 00:05:48] Checking for apptainer binary...
[2025-10-12 00:05:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 00:05:48] Running /usr/bin/apptainer --version
[2025-10-12 00:05:48] apptainer version 1.4.3-1.el9
[2025-10-12 00:05:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 00:05:49] c-208-37.aglt2.org
[2025-10-12 00:05:49] apptainer works
[2025-10-12 00:05:49] Set ATHENA_PROC_NUMBER=8
[2025-10-12 00:05:49] Set ATHENA_CORE_NUMBER=8
[2025-10-12 00:05:49] Starting ATLAS job with PandaID=6838851156
[2025-10-12 00:05:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 02:02:58]  *** The last 200 lines of the pilot log: ***
[2025-10-12 02:02:58] 2025-10-12 06:02:07,475 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 02:02:58] 2025-10-12 06:02:07,609 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-12 02:02:58] 2025-10-12 06:02:07,626 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3657.114890624998
[2025-10-12 02:02:58] 2025-10-12 06:02:07,650 | INFO     | using path: /tmp/boinchome/slots/8/PanDA_Pilot-6838851156/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 02:02:58] 2025-10-12 06:02:07,651 | INFO     | extracted standard info from prmon json
[2025-10-12 02:02:58] 2025-10-12 06:02:07,651 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 02:02:58] 2025-10-12 06:02:07,655 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 02:02:58] 2025-10-12 06:02:07,656 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 02:02:58] 2025-10-12 06:02:07,656 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 02:02:58] 2025-10-12 06:02:07,657 | INFO     | fitting pss+swap vs Time
[2025-10-12 02:02:58] 2025-10-12 06:02:07,657 | INFO     | sum of square deviations: 412698833.05454516
[2025-10-12 02:02:58] 2025-10-12 06:02:07,658 | INFO     | sum of deviations: 27021732245.109093
[2025-10-12 02:02:58] 2025-10-12 06:02:07,658 | INFO     | mean x: 1760245512.5636363
[2025-10-12 02:02:58] 2025-10-12 06:02:07,658 | INFO     | mean y: 2367166.6272727274
[2025-10-12 02:02:58] 2025-10-12 06:02:07,658 | INFO     | -- intersect: -115250885608.77588
[2025-10-12 02:02:58] 2025-10-12 06:02:07,658 | INFO     | intersect: -115250885608.77588
[2025-10-12 02:02:58] 2025-10-12 06:02:07,658 | INFO     | chi2: 4.1204565400186866
[2025-10-12 02:02:58] 2025-10-12 06:02:07,658 | INFO     | sum of square deviations: 358941820.5333342
[2025-10-12 02:02:58] 2025-10-12 06:02:07,658 | INFO     | sum of deviations: 33006192524.066677
[2025-10-12 02:02:58] 2025-10-12 06:02:07,659 | INFO     | mean x: 1760245360.0666666
[2025-10-12 02:02:58] 2025-10-12 06:02:07,659 | INFO     | mean y: 2383342.8476190474
[2025-10-12 02:02:58] 2025-10-12 06:02:07,659 | INFO     | -- intersect: -161859494879.16895
[2025-10-12 02:02:58] 2025-10-12 06:02:07,659 | INFO     | intersect: -161859494879.16895
[2025-10-12 02:02:58] 2025-10-12 06:02:07,659 | INFO     | chi2: 3.2909552843661687
[2025-10-12 02:02:58] 2025-10-12 06:02:07,659 | INFO     | current chi2=3.2909552843661687 (change=20.131294860077713 %)
[2025-10-12 02:02:58] 2025-10-12 06:02:07,659 | INFO     | right removable region: 104
[2025-10-12 02:02:58] 2025-10-12 06:02:07,659 | INFO     | sum of square deviations: 358937550.5333342
[2025-10-12 02:02:58] 2025-10-12 06:02:07,663 | INFO     | sum of deviations: -1714168700.7333326
[2025-10-12 02:02:58] 2025-10-12 06:02:07,663 | INFO     | mean x: 1760245665.0666666
[2025-10-12 02:02:58] 2025-10-12 06:02:07,663 | INFO     | mean y: 2448016.6761904764
[2025-10-12 02:02:58] 2025-10-12 06:02:07,663 | INFO     | -- intersect: 8408807340.673944
[2025-10-12 02:02:58] 2025-10-12 06:02:07,664 | INFO     | intersect: 8408807340.673944
[2025-10-12 02:02:58] 2025-10-12 06:02:07,664 | INFO     | chi2: 0.9775275468215245
[2025-10-12 02:02:58] 2025-10-12 06:02:07,664 | INFO     | current chi2=0.9775275468215245 (change=76.2762320794411 %)
[2025-10-12 02:02:58] 2025-10-12 06:02:07,664 | INFO     | sum of square deviations: 310060080.50999916
[2025-10-12 02:02:58] 2025-10-12 06:02:07,664 | INFO     | sum of deviations: -4864937866.05
[2025-10-12 02:02:58] 2025-10-12 06:02:07,664 | INFO     | mean x: 1760245817.57
[2025-10-12 02:02:58] 2025-10-12 06:02:07,664 | INFO     | mean y: 2457602.65
[2025-10-12 02:02:58] 2025-10-12 06:02:07,664 | INFO     | -- intersect: 27621254957.55899
[2025-10-12 02:02:58] 2025-10-12 06:02:07,664 | INFO     | intersect: 27621254957.55899
[2025-10-12 02:02:58] 2025-10-12 06:02:07,664 | INFO     | chi2: 0.9138077782000125
[2025-10-12 02:02:58] 2025-10-12 06:02:07,664 | INFO     | current chi2=0.9138077782000125 (change=6.518462710201857 %)
[2025-10-12 02:02:58] 2025-10-12 06:02:07,664 | INFO     | left removable region: 20
[2025-10-12 02:02:58] 2025-10-12 06:02:07,665 | INFO     | sum of square deviations: 183767632.41666666
[2025-10-12 02:02:58] 2025-10-12 06:02:07,665 | INFO     | sum of deviations: 1185583284.1666665
[2025-10-12 02:02:58] 2025-10-12 06:02:07,665 | INFO     | mean x: 1760245939.5833333
[2025-10-12 02:02:58] 2025-10-12 06:02:07,665 | INFO     | mean y: 2483128.404761905
[2025-10-12 02:02:58] 2025-10-12 06:02:07,665 | INFO     | -- intersect: -11353804888.956541
[2025-10-12 02:02:58] 2025-10-12 06:02:07,665 | INFO     | intersect: -11353804888.956541
[2025-10-12 02:02:58] 2025-10-12 06:02:07,665 | INFO     | chi2: 9.682897688146109e-05
[2025-10-12 02:02:58] 2025-10-12 06:02:07,665 | INFO     | -- intersect: -11353804888.956541
[2025-10-12 02:02:58] 2025-10-12 06:02:07,665 | INFO     | current memory leak: 6.45 B/s (using 84 data points, chi2=0.00)
[2025-10-12 02:02:58] 2025-10-12 06:02:07,665 | INFO     | could have reported an average CPU frequency of 3673 MHz (7 samples)
[2025-10-12 02:02:58] 2025-10-12 06:02:07,666 | INFO     | ..............................
[2025-10-12 02:02:58] 2025-10-12 06:02:07,666 | INFO     | . Timing measurements:
[2025-10-12 02:02:58] 2025-10-12 06:02:07,666 | INFO     | . get job = 0 s
[2025-10-12 02:02:58] 2025-10-12 06:02:07,666 | INFO     | . initial setup = 5 s
[2025-10-12 02:02:58] 2025-10-12 06:02:07,666 | INFO     | . payload setup = 47 s
[2025-10-12 02:02:58] 2025-10-12 06:02:07,666 | INFO     | . stage-in = 0 s
[2025-10-12 02:02:58] 2025-10-12 06:02:07,666 | INFO     | . payload execution = 6747 s
[2025-10-12 02:02:58] 2025-10-12 06:02:07,666 | INFO     | . stage-out = 3 s
[2025-10-12 02:02:58] 2025-10-12 06:02:07,666 | INFO     | . log creation = 0 s
[2025-10-12 02:02:58] 2025-10-12 06:02:07,666 | INFO     | ..............................
[2025-10-12 02:02:58] 2025-10-12 06:02:07,861 | INFO     | 
[2025-10-12 02:02:58] 2025-10-12 06:02:07,862 | INFO     | job summary report
[2025-10-12 02:02:58] 2025-10-12 06:02:07,862 | INFO     | --------------------------------------------------
[2025-10-12 02:02:58] 2025-10-12 06:02:07,862 | INFO     | PanDA job id: 6838851156
[2025-10-12 02:02:58] 2025-10-12 06:02:07,862 | INFO     | task id: 46676269
[2025-10-12 02:02:58] 2025-10-12 06:02:07,862 | INFO     | errors: (none)
[2025-10-12 02:02:58] 2025-10-12 06:02:07,862 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 02:02:58] 2025-10-12 06:02:07,862 | INFO     | pilot state: finished 
[2025-10-12 02:02:58] 2025-10-12 06:02:07,862 | INFO     | transexitcode: 0
[2025-10-12 02:02:58] 2025-10-12 06:02:07,862 | INFO     | exeerrorcode: 0
[2025-10-12 02:02:58] 2025-10-12 06:02:07,862 | INFO     | exeerrordiag: 
[2025-10-12 02:02:58] 2025-10-12 06:02:07,862 | INFO     | exitcode: 0
[2025-10-12 02:02:58] 2025-10-12 06:02:07,862 | INFO     | exitmsg: OK
[2025-10-12 02:02:58] 2025-10-12 06:02:07,862 | INFO     | cpuconsumptiontime: 24815 s
[2025-10-12 02:02:58] 2025-10-12 06:02:07,862 | INFO     | nevents: 400
[2025-10-12 02:02:58] 2025-10-12 06:02:07,862 | INFO     | neventsw: 0
[2025-10-12 02:02:58] 2025-10-12 06:02:07,862 | INFO     | pid: 438365
[2025-10-12 02:02:58] 2025-10-12 06:02:07,862 | INFO     | pgrp: 438365
[2025-10-12 02:02:58] 2025-10-12 06:02:07,862 | INFO     | corecount: 8
[2025-10-12 02:02:58] 2025-10-12 06:02:07,862 | INFO     | event service: False
[2025-10-12 02:02:58] 2025-10-12 06:02:07,862 | INFO     | sizes: {0: 2348627, 1: 2348882, 2: 2348882, 13: 2348910, 24: 2348966, 34: 2348994, 40: 2349412, 45: 2349440, 6796: 2376550, 6797: 2376549, 6802: 2385603, 6804: 238
[2025-10-12 02:02:58] 2025-10-12 06:02:07,862 | INFO     | --------------------------------------------------
[2025-10-12 02:02:58] 2025-10-12 06:02:07,862 | INFO     | 
[2025-10-12 02:02:58] 2025-10-12 06:02:07,862 | INFO     | executing command: ls -lF /tmp/boinchome/slots/8
[2025-10-12 02:02:58] 2025-10-12 06:02:08,021 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 02:02:58] 2025-10-12 06:02:08,021 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 02:02:58] 2025-10-12 06:02:08,021 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 02:02:58] 2025-10-12 06:02:08,021 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 02:02:58] 2025-10-12 06:02:08,021 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 02:02:58] 2025-10-12 06:02:08,021 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 02:02:58] 2025-10-12 06:02:08,021 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 02:02:58] 2025-10-12 06:02:08,021 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 02:02:58] 2025-10-12 06:02:08,021 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 02:02:58] 2025-10-12 06:02:08,021 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 02:02:58] 2025-10-12 06:02:08,021 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 02:02:58] 2025-10-12 06:02:08,021 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 02:02:58] 2025-10-12 06:02:08,021 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 02:02:58] 2025-10-12 06:02:08,021 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 02:02:58] 2025-10-12 06:02:08,021 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 02:02:58] 2025-10-12 06:02:08,021 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 02:02:58] 2025-10-12 06:02:08,021 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 02:02:58] 2025-10-12 06:02:08,022 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 02:02:58] 2025-10-12 06:02:08,022 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 02:02:58] 2025-10-12 06:02:08,022 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 02:02:58] 2025-10-12 06:02:08,022 | INFO     | job 6838851156 has completed (purged errors)
[2025-10-12 02:02:58] 2025-10-12 06:02:08,022 | INFO     | overall cleanup function is called
[2025-10-12 02:02:58] 2025-10-12 06:02:08,594 | INFO     | PID=389085 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 02:02:58] 2025-10-12 06:02:08,594 | INFO     | .. there are 27 such processes running
[2025-10-12 02:02:58] 2025-10-12 06:02:09,053 | INFO     | --- collectZombieJob: --- 10, [438365]
[2025-10-12 02:02:58] 2025-10-12 06:02:09,053 | INFO     | zombie collector waiting for pid 438365
[2025-10-12 02:02:58] 2025-10-12 06:02:09,054 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 02:02:58] 2025-10-12 06:02:09,054 | INFO     | collected zombie processes
[2025-10-12 02:02:58] 2025-10-12 06:02:09,054 | INFO     | will attempt to kill all subprocesses of pid=438365
[2025-10-12 02:02:58] 2025-10-12 06:02:10,086 | INFO     | process IDs to be killed: [438365] (in reverse order)
[2025-10-12 02:02:58] 2025-10-12 06:02:10,225 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 02:02:58] 2025-10-12 06:02:10,225 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 02:02:58] 2025-10-12 06:02:10,297 | INFO     | did not find any defunct processes belonging to 438365
[2025-10-12 02:02:58] 2025-10-12 06:02:10,367 | INFO     | did not find any defunct processes belonging to 438365
[2025-10-12 02:02:58] 2025-10-12 06:02:10,367 | INFO     | ready for new job
[2025-10-12 02:02:58] 2025-10-12 06:02:10,368 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 02:02:58] 2025-10-12 06:02:10,369 | INFO     | ***************************************
[2025-10-12 02:02:58] 2025-10-12 06:02:10,369 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 02:02:58] 2025-10-12 06:02:10,369 | INFO     | ***************************************
[2025-10-12 02:02:58] 2025-10-12 06:02:10,370 | INFO     | 
[2025-10-12 02:02:58] 2025-10-12 06:02:10,375 | INFO     | architecture information:
[2025-10-12 02:02:58] 2025-10-12 06:02:10,383 | INFO     | executing command: cat /etc/os-release
[2025-10-12 02:02:58] 2025-10-12 06:02:10,454 | INFO     | cat /etc/os-release:
[2025-10-12 02:02:58] NAME="CentOS Linux"
[2025-10-12 02:02:58] VERSION="7 (Core)"
[2025-10-12 02:02:58] ID="centos"
[2025-10-12 02:02:58] ID_LIKE="rhel fedora"
[2025-10-12 02:02:58] VERSION_ID="7"
[2025-10-12 02:02:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 02:02:58] ANSI_COLOR="0;31"
[2025-10-12 02:02:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 02:02:58] HOME_URL="https://www.centos.org/"
[2025-10-12 02:02:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 02:02:58] 
[2025-10-12 02:02:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 02:02:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 02:02:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 02:02:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 02:02:58] 
[2025-10-12 02:02:58] 2025-10-12 06:02:10,455 | INFO     | ***************************************
[2025-10-12 02:02:58] 2025-10-12 06:02:10,959 | INFO     | executing command: df -mP /tmp/boinchome/slots/8
[2025-10-12 02:02:58] 2025-10-12 06:02:11,045 | INFO     | sufficient remaining disk space (167646330880 B)
[2025-10-12 02:02:58] 2025-10-12 06:02:11,045 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 02:02:58] 2025-10-12 06:02:11,045 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 02:02:58] 2025-10-12 06:02:11,045 | INFO     | update_server=False
[2025-10-12 02:02:58] 2025-10-12 06:02:11,046 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 02:02:58] 2025-10-12 06:02:11,046 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 02:02:58] 2025-10-12 06:02:11,046 | INFO     | aborting loop
[2025-10-12 02:02:58] 2025-10-12 06:02:12,009 | INFO     | all data control threads have been joined
[2025-10-12 02:02:58] 2025-10-12 06:02:12,058 | INFO     | [job] retrieve thread has finished
[2025-10-12 02:02:58] 2025-10-12 06:02:12,062 | INFO     | [job] job monitor thread has finished
[2025-10-12 02:02:58] 2025-10-12 06:02:12,099 | INFO     | [job] validate thread has finished
[2025-10-12 02:02:58] 2025-10-12 06:02:12,164 | INFO     | [data] copytool_in thread has finished
[2025-10-12 02:02:58] 2025-10-12 06:02:12,214 | INFO     | all job control threads have been joined
[2025-10-12 02:02:58] 2025-10-12 06:02:12,219 | INFO     | all payload control threads have been joined
[2025-10-12 02:02:58] 2025-10-12 06:02:12,307 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 02:02:58] 2025-10-12 06:02:12,379 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 02:02:58] 2025-10-12 06:02:12,875 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 02:02:58] 2025-10-12 06:02:12,962 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 02:02:58] 2025-10-12 06:02:13,015 | INFO     | [data] control thread has finished
[2025-10-12 02:02:58] 2025-10-12 06:02:13,125 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 02:02:58] 2025-10-12 06:02:13,220 | INFO     | [job] control thread has finished
[2025-10-12 02:02:58] 2025-10-12 06:02:13,225 | INFO     | [payload] control thread has finished
[2025-10-12 02:02:58] 2025-10-12 06:02:13,491 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 02:02:58] 2025-10-12 06:02:13,546 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 02:02:58] 2025-10-12 06:02:13,639 | INFO     | [payload] failed_post thread has finished
[2025-10-12 02:02:58] 2025-10-12 06:02:13,640 | INFO     | [payload] validate_post thread has finished
[2025-10-12 02:02:58] 2025-10-12 06:02:13,881 | INFO     | [job] queue monitor thread has finished
[2025-10-12 02:02:58] 2025-10-12 06:02:14,314 | INFO     | [data] copytool_out thread has finished
[2025-10-12 02:02:58] 2025-10-12 06:02:17,500 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 02:02:58] 2025-10-12 06:02:43,185 | INFO     | PID=389085 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 02:02:58] 2025-10-12 06:02:43,185 | INFO     | .. there are 27 such processes running
[2025-10-12 02:02:58] 2025-10-12 06:02:43,185 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 02:02:58] 2025-10-12 06:02:43,185 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 02:02:58] 2025-10-12 06:02:43,185 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 02:02:58] 2025-10-12 06:02:50,174 | INFO     | [monitor] cgroup control has ended
[2025-10-12 02:02:58] 2025-10-12 06:02:50,527 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140569699579712)>', '<ExcThread(monitor, started 140569330292480)>']
[2025-10-12 02:02:58] 2025-10-12 06:02:51,233 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 02:02:58] 2025-10-12 06:02:51,235 | INFO     | [monitor] control thread has ended
[2025-10-12 02:02:58] 2025-10-12 06:02:55,553 | INFO     | all workflow threads have been joined
[2025-10-12 02:02:58] 2025-10-12 06:02:55,554 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 02:02:58] 2025-10-12 06:02:55,554 | INFO     | traces error code: 0
[2025-10-12 02:02:58] 2025-10-12 06:02:55,554 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 02:02:58] 2025-10-12 06:02:56,698 [wrapper] ==== pilot stdout END ====
[2025-10-12 02:02:58] 2025-10-12 06:02:56,743 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 02:02:58] 2025-10-12 06:02:56,759 [wrapper] pilotpid: 389085
[2025-10-12 02:02:58] 2025-10-12 06:02:56,797 [wrapper] Pilot exit status: 0
[2025-10-12 02:02:58] 2025-10-12 06:02:56,969 [wrapper] pandaids: 6838851156
[2025-10-12 02:02:58] 2025-10-12 06:02:57,398 [wrapper] cleanup supervisor_pilot  846022 389086
[2025-10-12 02:02:58] 2025-10-12 06:02:57,485 [wrapper] Test setup, not cleaning
[2025-10-12 02:02:58] 2025-10-12 06:02:57,535 [wrapper] apfmon messages muted
[2025-10-12 02:02:58] 2025-10-12 06:02:57,579 [wrapper] ==== wrapper stdout END ====
[2025-10-12 02:02:58] 2025-10-12 06:02:57,628 [wrapper] ==== wrapper stderr END ====
[2025-10-12 02:02:58]  *** Error codes and diagnostics ***
[2025-10-12 02:02:58]     "exeErrorCode": 0,
[2025-10-12 02:02:58]     "exeErrorDiag": "",
[2025-10-12 02:02:58]     "pilotErrorCode": 0,
[2025-10-12 02:02:58]     "pilotErrorDiag": "",
[2025-10-12 02:02:58]  *** Listing of results directory ***
[2025-10-12 02:02:58] total 404152
[2025-10-12 02:02:58] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 15:02 pilot3.tar.gz
[2025-10-12 02:02:58] -rwx------. 1 boincer umatlas     36292 Oct 11 15:29 runpilot2-wrapper.sh
[2025-10-12 02:02:58] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 15:29 queuedata.json
[2025-10-12 02:02:58] -rw-r--r--. 1 boincer umatlas       100 Oct 12 00:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 02:02:58] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 00:05 run_atlas
[2025-10-12 02:02:58] -rw-r--r--. 1 boincer umatlas       105 Oct 12 00:05 job.xml
[2025-10-12 02:02:58] -rw-r--r--. 2 boincer umatlas 219703319 Oct 12 00:05 EVNT.46676267._002550.pool.root.1
[2025-10-12 02:02:58] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:05 start_atlas.sh
[2025-10-12 02:02:58] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 00:05 shared
[2025-10-12 02:02:58] -rw-r--r--. 2 boincer umatlas    569675 Oct 12 00:05 input.tar.gz
[2025-10-12 02:02:58] -rw-r--r--. 1 boincer umatlas         0 Oct 12 00:05 boinc_lockfile
[2025-10-12 02:02:58] -rw-r--r--. 1 boincer umatlas      2548 Oct 12 00:05 pandaJob.out
[2025-10-12 02:02:58] -rw-------. 1 boincer umatlas    975512 Oct 12 00:06 agis_schedconf.cvmfs.json
[2025-10-12 02:02:58] -rw-------. 1 boincer umatlas   1560580 Oct 12 00:06 agis_ddmendpoints.agis.ALL.json
[2025-10-12 02:02:58] drwx------. 5 boincer umatlas      4096 Oct 12 00:06 pilot3
[2025-10-12 02:02:58] -rw-r--r--. 1 boincer umatlas      7174 Oct 12 01:56 init_data.xml
[2025-10-12 02:02:58] -rw-------. 1 boincer umatlas 187777748 Oct 12 02:00 HITS.46676269._063458.pool.root.1
[2025-10-12 02:02:58] -rw-r--r--. 1 boincer umatlas       529 Oct 12 02:00 boinc_task_state.xml
[2025-10-12 02:02:58] -rw-------. 1 boincer umatlas      1047 Oct 12 02:01 memory_monitor_summary.json
[2025-10-12 02:02:58] -rw-------. 1 boincer umatlas    341579 Oct 12 02:01 log.46676269._063458.job.log.tgz.1
[2025-10-12 02:02:58] -rw-------. 1 boincer umatlas        95 Oct 12 02:01 pilot_heartbeat.json
[2025-10-12 02:02:58] -rw-------. 1 boincer umatlas      7803 Oct 12 02:02 heartbeat.json
[2025-10-12 02:02:58] -rw-------. 1 boincer umatlas      4824 Oct 12 02:02 pilotlog.txt
[2025-10-12 02:02:58] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 02:02 boinc_mmap_file
[2025-10-12 02:02:58] -rw-r--r--. 1 boincer umatlas        27 Oct 12 02:02 wrapper_checkpoint.txt
[2025-10-12 02:02:58] -rw-------. 1 boincer umatlas    888857 Oct 12 02:02 log.46676269._063458.job.log.1
[2025-10-12 02:02:58] -rw-------. 1 boincer umatlas       357 Oct 12 02:02 output.list
[2025-10-12 02:02:58] -rw-r--r--. 1 boincer umatlas       620 Oct 12 02:02 runtime_log
[2025-10-12 02:02:58] -rw-------. 1 boincer umatlas   1249280 Oct 12 02:02 result.tar.gz
[2025-10-12 02:02:58] -rw-r--r--. 1 boincer umatlas      8703 Oct 12 02:02 runtime_log.err
[2025-10-12 02:02:58] -rw-------. 1 boincer umatlas       657 Oct 12 02:02 J5eMDm5SuR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmWNhNDm1FItgm.diag
[2025-10-12 02:02:58] -rw-r--r--. 1 boincer umatlas     21251 Oct 12 02:02 stderr.txt
[2025-10-12 02:02:58] HITS file was successfully produced:
[2025-10-12 02:02:58] -rw-------. 1 boincer umatlas 187777748 Oct 12 02:00 shared/HITS.pool.root.1
[2025-10-12 02:02:58]  *** Contents of shared directory: ***
[2025-10-12 02:02:58] total 399740
[2025-10-12 02:02:58] -rw-r--r--. 2 boincer umatlas 219703319 Oct 12 00:05 ATLAS.root_0
[2025-10-12 02:02:58] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:05 start_atlas.sh
[2025-10-12 02:02:58] -rw-r--r--. 2 boincer umatlas    569675 Oct 12 00:05 input.tar.gz
[2025-10-12 02:02:58] -rw-------. 1 boincer umatlas 187777748 Oct 12 02:00 HITS.pool.root.1
[2025-10-12 02:02:58] -rw-------. 1 boincer umatlas   1249280 Oct 12 02:02 result.tar.gz
02:03:00 (379650): run_atlas exited; CPU time 25023.133506
02:03:00 (379650): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN