Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:05:01 (3792873): wrapper (7.7.26015): starting
00:05:01 (3792873): wrapper: running run_atlas (--nthreads 11)
[2025-10-12 00:05:01] Arguments: --nthreads 11
[2025-10-12 00:05:01] Threads: 11
[2025-10-12 00:05:01] Checking for CVMFS
[2025-10-12 00:05:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 00:05:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 00:05:02] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 00:05:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 00:05:03] 2.13.2.0 1071838 128757 792424 151594 -486 805 17151931 32935936 34308 16776704 0 101418251 99.669 89084274 24260 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 00:05:03] CVMFS is ok
[2025-10-12 00:05:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 00:05:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 00:05:03] Further information can be found at the LHC@home message board.
[2025-10-12 00:05:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 00:05:03] Checking for apptainer binary...
[2025-10-12 00:05:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 00:05:03] Running /usr/bin/apptainer --version
[2025-10-12 00:05:03] apptainer version 1.4.3-1.el9
[2025-10-12 00:05:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 00:05:04] c-8-39.aglt2.org
[2025-10-12 00:05:04] apptainer works
[2025-10-12 00:05:04] Set ATHENA_PROC_NUMBER=11
[2025-10-12 00:05:04] Set ATHENA_CORE_NUMBER=11
[2025-10-12 00:05:04] Starting ATLAS job with PandaID=6838990845
[2025-10-12 00:05:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 09:21:00]  *** The last 200 lines of the pilot log: ***
[2025-10-12 09:21:00] 2025-10-12 13:19:58,328 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 09:21:00] 2025-10-12 13:19:58,328 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 09:21:00] 2025-10-12 13:19:58,351 | INFO     | fitting pss+swap vs Time
[2025-10-12 09:21:00] 2025-10-12 13:19:58,352 | INFO     | sum of square deviations: 49638782004.213264
[2025-10-12 09:21:00] 2025-10-12 13:19:58,359 | INFO     | sum of deviations: 510370663757.6556
[2025-10-12 09:21:00] 2025-10-12 13:19:58,360 | INFO     | mean x: 1760258572.1860037
[2025-10-12 09:21:00] 2025-10-12 13:19:58,360 | INFO     | mean y: 2322567.191528545
[2025-10-12 09:21:00] 2025-10-12 13:19:58,360 | INFO     | -- intersect: -18096113768.241123
[2025-10-12 09:21:00] 2025-10-12 13:19:58,360 | INFO     | intersect: -18096113768.241123
[2025-10-12 09:21:00] 2025-10-12 13:19:58,361 | INFO     | chi2: 4.916117550492358
[2025-10-12 09:21:00] 2025-10-12 13:19:58,362 | INFO     | sum of square deviations: 48280152939.61528
[2025-10-12 09:21:00] 2025-10-12 13:19:58,369 | INFO     | sum of deviations: 578775386747.911
[2025-10-12 09:21:00] 2025-10-12 13:19:58,369 | INFO     | mean x: 1760258419.697026
[2025-10-12 09:21:00] 2025-10-12 13:19:58,369 | INFO     | mean y: 2330202.944237918
[2025-10-12 09:21:00] 2025-10-12 13:19:58,370 | INFO     | -- intersect: -21099389356.864002
[2025-10-12 09:21:00] 2025-10-12 13:19:58,370 | INFO     | intersect: -21099389356.864002
[2025-10-12 09:21:00] 2025-10-12 13:19:58,370 | INFO     | chi2: 3.2939357295284566
[2025-10-12 09:21:00] 2025-10-12 13:19:58,371 | INFO     | current chi2=3.2939357295284566 (change=32.99721384411235 %)
[2025-10-12 09:21:00] 2025-10-12 13:19:58,372 | INFO     | sum of square deviations: 46946449516.116196
[2025-10-12 09:21:00] 2025-10-12 13:19:58,378 | INFO     | sum of deviations: 577540484058.8109
[2025-10-12 09:21:00] 2025-10-12 13:19:58,379 | INFO     | mean x: 1760258267.2026267
[2025-10-12 09:21:00] 2025-10-12 13:19:58,379 | INFO     | mean y: 2330061.9924953096
[2025-10-12 09:21:00] 2025-10-12 13:19:58,379 | INFO     | -- intersect: -21652564444.134834
[2025-10-12 09:21:00] 2025-10-12 13:19:58,379 | INFO     | intersect: -21652564444.134834
[2025-10-12 09:21:00] 2025-10-12 13:19:58,380 | INFO     | chi2: 3.2711768608031
[2025-10-12 09:21:00] 2025-10-12 13:19:58,382 | INFO     | current chi2=3.2711768608031 (change=0.6909323858791453 %)
[2025-10-12 09:21:00] 2025-10-12 13:19:58,382 | INFO     | right removable region: 532
[2025-10-12 09:21:00] 2025-10-12 13:19:58,383 | INFO     | sum of square deviations: 48279760099.61529
[2025-10-12 09:21:00] 2025-10-12 13:19:58,390 | INFO     | sum of deviations: 380923162403.2975
[2025-10-12 09:21:00] 2025-10-12 13:19:58,390 | INFO     | mean x: 1760258724.697026
[2025-10-12 09:21:00] 2025-10-12 13:19:58,391 | INFO     | mean y: 2337071.185873606
[2025-10-12 09:21:00] 2025-10-12 13:19:58,391 | INFO     | -- intersect: -13885953149.728659
[2025-10-12 09:21:00] 2025-10-12 13:19:58,391 | INFO     | intersect: -13885953149.728659
[2025-10-12 09:21:00] 2025-10-12 13:19:58,392 | INFO     | chi2: 2.5065624741368495
[2025-10-12 09:21:00] 2025-10-12 13:19:58,392 | INFO     | current chi2=2.5065624741368495 (change=49.01337389937284 %)
[2025-10-12 09:21:00] 2025-10-12 13:19:58,393 | INFO     | sum of square deviations: 46945794495.298065
[2025-10-12 09:21:00] 2025-10-12 13:19:58,399 | INFO     | sum of deviations: 316073935269.88763
[2025-10-12 09:21:00] 2025-10-12 13:19:58,400 | INFO     | mean x: 1760258877.206379
[2025-10-12 09:21:00] 2025-10-12 13:19:58,400 | INFO     | mean y: 2344477.091932458
[2025-10-12 09:21:00] 2025-10-12 13:19:58,400 | INFO     | -- intersect: -11849024881.841772
[2025-10-12 09:21:00] 2025-10-12 13:19:58,400 | INFO     | intersect: -11849024881.841772
[2025-10-12 09:21:00] 2025-10-12 13:19:58,401 | INFO     | chi2: 2.0242878634959616
[2025-10-12 09:21:00] 2025-10-12 13:19:58,401 | INFO     | current chi2=2.0242878634959616 (change=19.240478368964737 %)
[2025-10-12 09:21:00] 2025-10-12 13:19:58,401 | INFO     | left removable region: 20
[2025-10-12 09:21:00] 2025-10-12 13:19:58,402 | INFO     | sum of square deviations: 41612290707.5
[2025-10-12 09:21:00] 2025-10-12 13:19:58,412 | INFO     | sum of deviations: 346436279645.8125
[2025-10-12 09:21:00] 2025-10-12 13:19:58,412 | INFO     | mean x: 1760258846.71875
[2025-10-12 09:21:00] 2025-10-12 13:19:58,412 | INFO     | mean y: 2357440.95703125
[2025-10-12 09:21:00] 2025-10-12 13:19:58,412 | INFO     | -- intersect: -14652387964.850721
[2025-10-12 09:21:00] 2025-10-12 13:19:58,412 | INFO     | intersect: -14652387964.850721
[2025-10-12 09:21:00] 2025-10-12 13:19:58,413 | INFO     | chi2: 0.277495012642751
[2025-10-12 09:21:00] 2025-10-12 13:19:58,413 | INFO     | -- intersect: -14652387964.850721
[2025-10-12 09:21:00] 2025-10-12 13:19:58,414 | INFO     | current memory leak: 8.33 B/s (using 512 data points, chi2=0.28)
[2025-10-12 09:21:00] 2025-10-12 13:19:58,414 | INFO     | could have reported an average CPU frequency of 2778 MHz (21 samples)
[2025-10-12 09:21:00] 2025-10-12 13:19:58,415 | INFO     | ..............................
[2025-10-12 09:21:00] 2025-10-12 13:19:58,415 | INFO     | . Timing measurements:
[2025-10-12 09:21:00] 2025-10-12 13:19:58,415 | INFO     | . get job = 0 s
[2025-10-12 09:21:00] 2025-10-12 13:19:58,415 | INFO     | . initial setup = 4 s
[2025-10-12 09:21:00] 2025-10-12 13:19:58,415 | INFO     | . payload setup = 19 s
[2025-10-12 09:21:00] 2025-10-12 13:19:58,415 | INFO     | . stage-in = 0 s
[2025-10-12 09:21:00] 2025-10-12 13:19:58,415 | INFO     | . payload execution = 33131 s
[2025-10-12 09:21:00] 2025-10-12 13:19:58,415 | INFO     | . stage-out = 8 s
[2025-10-12 09:21:00] 2025-10-12 13:19:58,416 | INFO     | . log creation = 1 s
[2025-10-12 09:21:00] 2025-10-12 13:19:58,416 | INFO     | ..............................
[2025-10-12 09:21:00] 2025-10-12 13:19:58,733 | INFO     | 
[2025-10-12 09:21:00] 2025-10-12 13:19:58,733 | INFO     | job summary report
[2025-10-12 09:21:00] 2025-10-12 13:19:58,733 | INFO     | --------------------------------------------------
[2025-10-12 09:21:00] 2025-10-12 13:19:58,733 | INFO     | PanDA job id: 6838990845
[2025-10-12 09:21:00] 2025-10-12 13:19:58,733 | INFO     | task id: 46676269
[2025-10-12 09:21:00] 2025-10-12 13:19:58,734 | INFO     | errors: (none)
[2025-10-12 09:21:00] 2025-10-12 13:19:58,734 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 09:21:00] 2025-10-12 13:19:58,734 | INFO     | pilot state: finished 
[2025-10-12 09:21:00] 2025-10-12 13:19:58,734 | INFO     | transexitcode: 0
[2025-10-12 09:21:00] 2025-10-12 13:19:58,734 | INFO     | exeerrorcode: 0
[2025-10-12 09:21:00] 2025-10-12 13:19:58,734 | INFO     | exeerrordiag: 
[2025-10-12 09:21:00] 2025-10-12 13:19:58,734 | INFO     | exitcode: 0
[2025-10-12 09:21:00] 2025-10-12 13:19:58,734 | INFO     | exitmsg: OK
[2025-10-12 09:21:00] 2025-10-12 13:19:58,734 | INFO     | cpuconsumptiontime: 52575 s
[2025-10-12 09:21:00] 2025-10-12 13:19:58,735 | INFO     | nevents: 400
[2025-10-12 09:21:00] 2025-10-12 13:19:58,735 | INFO     | neventsw: 0
[2025-10-12 09:21:00] 2025-10-12 13:19:58,735 | INFO     | pid: 3814515
[2025-10-12 09:21:00] 2025-10-12 13:19:58,735 | INFO     | pgrp: 3814515
[2025-10-12 09:21:00] 2025-10-12 13:19:58,735 | INFO     | corecount: 11
[2025-10-12 09:21:00] 2025-10-12 13:19:58,735 | INFO     | event service: False
[2025-10-12 09:21:00] 2025-10-12 13:19:58,735 | INFO     | sizes: {0: 2348680, 1: 2348879, 12: 2348879, 22: 2349169, 24: 2349197, 33156: 2387562, 33166: 2396560, 33169: 2396616, 33206: 2396810}
[2025-10-12 09:21:00] 2025-10-12 13:19:58,735 | INFO     | --------------------------------------------------
[2025-10-12 09:21:00] 2025-10-12 13:19:58,735 | INFO     | 
[2025-10-12 09:21:00] 2025-10-12 13:19:58,736 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-12 09:21:00] 2025-10-12 13:19:58,856 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 09:21:00] 2025-10-12 13:19:58,856 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 09:21:00] 2025-10-12 13:19:58,856 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 09:21:00] 2025-10-12 13:19:58,857 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 09:21:00] 2025-10-12 13:19:58,857 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 09:21:00] 2025-10-12 13:19:58,857 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 09:21:00] 2025-10-12 13:19:58,857 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 09:21:00] 2025-10-12 13:19:58,857 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 09:21:00] 2025-10-12 13:19:58,857 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 09:21:00] 2025-10-12 13:19:58,857 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 09:21:00] 2025-10-12 13:19:58,857 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 09:21:00] 2025-10-12 13:19:58,858 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 09:21:00] 2025-10-12 13:19:58,858 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 09:21:00] 2025-10-12 13:19:58,858 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 09:21:00] 2025-10-12 13:19:58,858 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 09:21:00] 2025-10-12 13:19:58,858 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 09:21:00] 2025-10-12 13:19:58,858 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 09:21:00] 2025-10-12 13:19:58,858 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 09:21:00] 2025-10-12 13:19:58,858 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 09:21:00] 2025-10-12 13:19:58,858 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 09:21:00] 2025-10-12 13:19:58,859 | INFO     | job 6838990845 has completed (purged errors)
[2025-10-12 09:21:00] 2025-10-12 13:19:58,859 | INFO     | overall cleanup function is called
[2025-10-12 09:21:00] 2025-10-12 13:19:59,891 | INFO     | --- collectZombieJob: --- 10, [3814515]
[2025-10-12 09:21:00] 2025-10-12 13:19:59,891 | INFO     | zombie collector waiting for pid 3814515
[2025-10-12 09:21:00] 2025-10-12 13:19:59,891 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 09:21:00] 2025-10-12 13:19:59,891 | INFO     | collected zombie processes
[2025-10-12 09:21:00] 2025-10-12 13:19:59,891 | INFO     | will attempt to kill all subprocesses of pid=3814515
[2025-10-12 09:21:00] 2025-10-12 13:20:01,482 | INFO     | process IDs to be killed: [3814515] (in reverse order)
[2025-10-12 09:21:00] 2025-10-12 13:20:02,294 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 09:21:00] 2025-10-12 13:20:02,295 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 09:21:00] 2025-10-12 13:20:02,377 | INFO     | did not find any defunct processes belonging to 3814515
[2025-10-12 09:21:00] 2025-10-12 13:20:02,397 | INFO     | did not find any defunct processes belonging to 3814515
[2025-10-12 09:21:00] 2025-10-12 13:20:02,398 | INFO     | ready for new job
[2025-10-12 09:21:00] 2025-10-12 13:20:02,398 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 09:21:00] 2025-10-12 13:20:02,401 | INFO     | ***************************************
[2025-10-12 09:21:00] 2025-10-12 13:20:02,401 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 09:21:00] 2025-10-12 13:20:02,402 | INFO     | ***************************************
[2025-10-12 09:21:00] 2025-10-12 13:20:02,402 | INFO     | 
[2025-10-12 09:21:00] 2025-10-12 13:20:02,405 | INFO     | architecture information:
[2025-10-12 09:21:00] 2025-10-12 13:20:02,407 | INFO     | executing command: cat /etc/os-release
[2025-10-12 09:21:00] 2025-10-12 13:20:02,627 | INFO     | cat /etc/os-release:
[2025-10-12 09:21:00] NAME="CentOS Linux"
[2025-10-12 09:21:00] VERSION="7 (Core)"
[2025-10-12 09:21:00] ID="centos"
[2025-10-12 09:21:00] ID_LIKE="rhel fedora"
[2025-10-12 09:21:00] VERSION_ID="7"
[2025-10-12 09:21:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 09:21:00] ANSI_COLOR="0;31"
[2025-10-12 09:21:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 09:21:00] HOME_URL="https://www.centos.org/"
[2025-10-12 09:21:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 09:21:00] 
[2025-10-12 09:21:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 09:21:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 09:21:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 09:21:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 09:21:00] 
[2025-10-12 09:21:00] 2025-10-12 13:20:02,627 | INFO     | ***************************************
[2025-10-12 09:21:00] 2025-10-12 13:20:03,131 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-12 09:21:00] 2025-10-12 13:20:03,215 | INFO     | sufficient remaining disk space (74295803904 B)
[2025-10-12 09:21:00] 2025-10-12 13:20:03,227 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 09:21:00] 2025-10-12 13:20:03,227 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 09:21:00] 2025-10-12 13:20:03,243 | INFO     | update_server=False
[2025-10-12 09:21:00] 2025-10-12 13:20:03,243 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 09:21:00] 2025-10-12 13:20:03,244 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 09:21:00] 2025-10-12 13:20:03,245 | INFO     | aborting loop
[2025-10-12 09:21:00] 2025-10-12 13:20:03,667 | INFO     | all data control threads have been joined
[2025-10-12 09:21:00] 2025-10-12 13:20:03,763 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 09:21:00] 2025-10-12 13:20:03,890 | INFO     | all payload control threads have been joined
[2025-10-12 09:21:00] 2025-10-12 13:20:04,249 | INFO     | [job] retrieve thread has finished
[2025-10-12 09:21:00] 2025-10-12 13:20:04,252 | INFO     | [job] job monitor thread has finished
[2025-10-12 09:21:00] 2025-10-12 13:20:04,284 | INFO     | [payload] failed_post thread has finished
[2025-10-12 09:21:00] 2025-10-12 13:20:04,337 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 09:21:00] 2025-10-12 13:20:04,383 | INFO     | [payload] validate_post thread has finished
[2025-10-12 09:21:00] 2025-10-12 13:20:04,633 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 09:21:00] 2025-10-12 13:20:04,673 | INFO     | [data] control thread has finished
[2025-10-12 09:21:00] 2025-10-12 13:20:04,769 | INFO     | [job] queue monitor thread has finished
[2025-10-12 09:21:00] 2025-10-12 13:20:04,790 | INFO     | all job control threads have been joined
[2025-10-12 09:21:00] 2025-10-12 13:20:04,843 | INFO     | [job] validate thread has finished
[2025-10-12 09:21:00] 2025-10-12 13:20:04,851 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 09:21:00] 2025-10-12 13:20:04,858 | INFO     | [data] copytool_in thread has finished
[2025-10-12 09:21:00] 2025-10-12 13:20:04,896 | INFO     | [payload] control thread has finished
[2025-10-12 09:21:00] 2025-10-12 13:20:05,046 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 09:21:00] 2025-10-12 13:20:05,307 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 09:21:00] 2025-10-12 13:20:05,316 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 09:21:00] 2025-10-12 13:20:05,796 | INFO     | [job] control thread has finished
[2025-10-12 09:21:00] 2025-10-12 13:20:06,641 | INFO     | [data] copytool_out thread has finished
[2025-10-12 09:21:00] 2025-10-12 13:20:08,351 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 09:21:00] 2025-10-12 13:20:33,682 | INFO     | PID=3800694 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 09:21:00] 2025-10-12 13:20:33,682 | INFO     | .. there are 48 such processes running
[2025-10-12 09:21:00] 2025-10-12 13:20:33,706 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 09:21:00] 2025-10-12 13:20:33,706 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 09:21:00] 2025-10-12 13:20:33,706 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 09:21:00] 2025-10-12 13:20:51,179 [wrapper] supervise_pilot (15 min periods counter: 38)
[2025-10-12 09:21:00] 2025-10-12 13:20:54,210 | INFO     | [monitor] cgroup control has ended
[2025-10-12 09:21:00] 2025-10-12 13:20:54,669 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140185015310144)>', '<ExcThread(monitor, started 140184293201664)>']
[2025-10-12 09:21:00] 2025-10-12 13:20:54,856 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 09:21:00] 2025-10-12 13:20:54,856 | INFO     | [monitor] control thread has ended
[2025-10-12 09:21:00] 2025-10-12 13:20:59,695 | INFO     | all workflow threads have been joined
[2025-10-12 09:21:00] 2025-10-12 13:20:59,696 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 09:21:00] 2025-10-12 13:20:59,697 | INFO     | traces error code: 0
[2025-10-12 09:21:00] 2025-10-12 13:20:59,697 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 09:21:00] 2025-10-12 13:20:59,906 [wrapper] ==== pilot stdout END ====
[2025-10-12 09:21:00] 2025-10-12 13:20:59,909 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 09:21:00] 2025-10-12 13:20:59,912 [wrapper] pilotpid: 3800694
[2025-10-12 09:21:00] 2025-10-12 13:20:59,914 [wrapper] Pilot exit status: 0
[2025-10-12 09:21:00] 2025-10-12 13:20:59,964 [wrapper] pandaids: 6838990845
[2025-10-12 09:21:00] 2025-10-12 13:21:00,299 [wrapper] cleanup supervisor_pilot 1545492 3800695
[2025-10-12 09:21:00] 2025-10-12 13:21:00,310 [wrapper] Test setup, not cleaning
[2025-10-12 09:21:00] 2025-10-12 13:21:00,315 [wrapper] apfmon messages muted
[2025-10-12 09:21:00] 2025-10-12 13:21:00,349 [wrapper] ==== wrapper stdout END ====
[2025-10-12 09:21:00] 2025-10-12 13:21:00,371 [wrapper] ==== wrapper stderr END ====
[2025-10-12 09:21:00]  *** Error codes and diagnostics ***
[2025-10-12 09:21:00]     "exeErrorCode": 0,
[2025-10-12 09:21:00]     "exeErrorDiag": "",
[2025-10-12 09:21:00]     "pilotErrorCode": 0,
[2025-10-12 09:21:00]     "pilotErrorDiag": "",
[2025-10-12 09:21:00]  *** Listing of results directory ***
[2025-10-12 09:21:00] total 418592
[2025-10-12 09:21:00] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 18:51 pilot3.tar.gz
[2025-10-12 09:21:00] -rwx------. 1 boincer umatlas     36292 Oct 11 18:53 runpilot2-wrapper.sh
[2025-10-12 09:21:00] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 18:53 queuedata.json
[2025-10-12 09:21:00] -rw-r--r--. 1 boincer umatlas       100 Oct 12 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 09:21:00] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 00:04 run_atlas
[2025-10-12 09:21:00] -rw-r--r--. 1 boincer umatlas       105 Oct 12 00:04 job.xml
[2025-10-12 09:21:00] -rw-r--r--. 2 boincer umatlas 223496834 Oct 12 00:05 EVNT.46676267._002673.pool.root.1
[2025-10-12 09:21:00] -rw-r--r--. 2 boincer umatlas    569678 Oct 12 00:05 input.tar.gz
[2025-10-12 09:21:00] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:05 start_atlas.sh
[2025-10-12 09:21:00] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 00:05 shared
[2025-10-12 09:21:00] -rw-r--r--. 1 boincer umatlas         0 Oct 12 00:05 boinc_lockfile
[2025-10-12 09:21:00] -rw-r--r--. 1 boincer umatlas      2547 Oct 12 00:05 pandaJob.out
[2025-10-12 09:21:00] -rw-------. 1 boincer umatlas    975512 Oct 12 00:05 agis_schedconf.cvmfs.json
[2025-10-12 09:21:00] drwx------. 5 boincer umatlas      4096 Oct 12 00:05 pilot3
[2025-10-12 09:21:00] -rw-------. 1 boincer umatlas 192775135 Oct 12 09:17 HITS.46676269._066334.pool.root.1
[2025-10-12 09:21:00] -rw-r--r--. 1 boincer umatlas       531 Oct 12 09:17 boinc_task_state.xml
[2025-10-12 09:21:00] -rw-r--r--. 1 boincer umatlas      6614 Oct 12 09:18 init_data.xml
[2025-10-12 09:21:00] -rw-------. 1 boincer umatlas      1043 Oct 12 09:19 memory_monitor_summary.json
[2025-10-12 09:21:00] -rw-------. 1 boincer umatlas   1560580 Oct 12 09:19 agis_ddmendpoints.agis.ALL.json
[2025-10-12 09:21:00] -rw-------. 1 boincer umatlas    688731 Oct 12 09:19 log.46676269._066334.job.log.tgz.1
[2025-10-12 09:21:00] -rw-------. 1 boincer umatlas      7823 Oct 12 09:19 heartbeat.json
[2025-10-12 09:21:00] -rw-------. 1 boincer umatlas        95 Oct 12 09:20 pilot_heartbeat.json
[2025-10-12 09:21:00] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 09:20 boinc_mmap_file
[2025-10-12 09:21:00] -rw-r--r--. 1 boincer umatlas        28 Oct 12 09:20 wrapper_checkpoint.txt
[2025-10-12 09:21:00] -rw-------. 1 boincer umatlas      4824 Oct 12 09:20 pilotlog.txt
[2025-10-12 09:21:00] -rw-------. 1 boincer umatlas   3542832 Oct 12 09:21 log.46676269._066334.job.log.1
[2025-10-12 09:21:00] -rw-------. 1 boincer umatlas       357 Oct 12 09:21 output.list
[2025-10-12 09:21:00] -rw-r--r--. 1 boincer umatlas       620 Oct 12 09:21 runtime_log
[2025-10-12 09:21:00] -rw-------. 1 boincer umatlas   4249600 Oct 12 09:21 result.tar.gz
[2025-10-12 09:21:00] -rw-r--r--. 1 boincer umatlas      8696 Oct 12 09:21 runtime_log.err
[2025-10-12 09:21:00] -rw-------. 1 boincer umatlas       653 Oct 12 09:21 mCSMDmFexR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmvphNDmOrbpYm.diag
[2025-10-12 09:21:00] -rw-r--r--. 1 boincer umatlas     20698 Oct 12 09:21 stderr.txt
[2025-10-12 09:21:00] HITS file was successfully produced:
[2025-10-12 09:21:00] -rw-------. 1 boincer umatlas 192775135 Oct 12 09:17 shared/HITS.pool.root.1
[2025-10-12 09:21:00]  *** Contents of shared directory: ***
[2025-10-12 09:21:00] total 411252
[2025-10-12 09:21:00] -rw-r--r--. 2 boincer umatlas 223496834 Oct 12 00:05 ATLAS.root_0
[2025-10-12 09:21:00] -rw-r--r--. 2 boincer umatlas    569678 Oct 12 00:05 input.tar.gz
[2025-10-12 09:21:00] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:05 start_atlas.sh
[2025-10-12 09:21:00] -rw-------. 1 boincer umatlas 192775135 Oct 12 09:17 HITS.pool.root.1
[2025-10-12 09:21:00] -rw-------. 1 boincer umatlas   4249600 Oct 12 09:21 result.tar.gz
09:21:02 (3792873): run_atlas exited; CPU time 54098.988462
09:21:02 (3792873): called boinc_finish(0)

</stderr_txt>
]]>

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