Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:05:08 (1914724): wrapper (7.7.26015): starting
00:05:08 (1914724): wrapper: running run_atlas (--nthreads 9)
[2025-10-12 00:05:08] Arguments: --nthreads 9
[2025-10-12 00:05:08] Threads: 9
[2025-10-12 00:05:08] Checking for CVMFS
[2025-10-12 00:05:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 00:05:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 00:05:09] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 00:05:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 00:05:11] 2.13.2.0 1588522 128757 671956 151607 2 59 25390096 32935936 61841 16776704 0 188968311 99.745 124766574 20516 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 00:05:11] CVMFS is ok
[2025-10-12 00:05:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 00:05:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 00:05:11] Further information can be found at the LHC@home message board.
[2025-10-12 00:05:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 00:05:11] Checking for apptainer binary...
[2025-10-12 00:05:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 00:05:11] Running /usr/bin/apptainer --version
[2025-10-12 00:05:11] apptainer version 1.4.3-1.el9
[2025-10-12 00:05:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 00:05:11] c-3-40.aglt2.org
[2025-10-12 00:05:11] apptainer works
[2025-10-12 00:05:11] Set ATHENA_PROC_NUMBER=9
[2025-10-12 00:05:11] Set ATHENA_CORE_NUMBER=9
[2025-10-12 00:05:11] Starting ATLAS job with PandaID=6838990832
[2025-10-12 00:05:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 10:41:02]  *** The last 200 lines of the pilot log: ***
[2025-10-12 10:41:02] 2025-10-12 14:40:11,046 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 10:41:02] 2025-10-12 14:40:11,319 | INFO     | time since job start (38015s) is within the limit (172800.0s)
[2025-10-12 10:41:02] 2025-10-12 14:40:12,986 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-12 10:41:02] 2025-10-12 14:40:13,028 | INFO     | found 40 cores (20 cores per socket, 2 sockets) HT, CPU MHz: 3010.1277625000007
[2025-10-12 10:41:02] 2025-10-12 14:40:13,059 | INFO     | using path: /tmp/boinchome/slots/6/PanDA_Pilot-6838990832/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 10:41:02] 2025-10-12 14:40:13,064 | INFO     | extracted standard info from prmon json
[2025-10-12 10:41:02] 2025-10-12 14:40:13,064 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 10:41:02] 2025-10-12 14:40:13,064 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 10:41:02] 2025-10-12 14:40:13,065 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 10:41:02] 2025-10-12 14:40:13,065 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 10:41:02] 2025-10-12 14:40:13,098 | INFO     | fitting pss+swap vs Time
[2025-10-12 10:41:02] 2025-10-12 14:40:13,099 | INFO     | sum of square deviations: 73898216667.7354
[2025-10-12 10:41:02] 2025-10-12 14:40:13,125 | INFO     | sum of deviations: 193430280854.32922
[2025-10-12 10:41:02] 2025-10-12 14:40:13,126 | INFO     | mean x: 1760261028.7451613
[2025-10-12 10:41:02] 2025-10-12 14:40:13,126 | INFO     | mean y: 2100230.6096774195
[2025-10-12 10:41:02] 2025-10-12 14:40:13,126 | INFO     | -- intersect: -4605423475.923378
[2025-10-12 10:41:02] 2025-10-12 14:40:13,130 | INFO     | intersect: -4605423475.923378
[2025-10-12 10:41:02] 2025-10-12 14:40:13,131 | INFO     | chi2: 3.538872850147084
[2025-10-12 10:41:02] 2025-10-12 14:40:13,132 | INFO     | sum of square deviations: 72124666615.92525
[2025-10-12 10:41:02] 2025-10-12 14:40:13,169 | INFO     | sum of deviations: 235093170760.553
[2025-10-12 10:41:02] 2025-10-12 14:40:13,170 | INFO     | mean x: 1760260876.2455285
[2025-10-12 10:41:02] 2025-10-12 14:40:13,170 | INFO     | mean y: 2103793.837398374
[2025-10-12 10:41:02] 2025-10-12 14:40:13,170 | INFO     | -- intersect: -5735535354.860412
[2025-10-12 10:41:02] 2025-10-12 14:40:13,170 | INFO     | intersect: -5735535354.860412
[2025-10-12 10:41:02] 2025-10-12 14:40:13,171 | INFO     | chi2: 2.8323100041944542
[2025-10-12 10:41:02] 2025-10-12 14:40:13,171 | INFO     | current chi2=2.8323100041944542 (change=19.96575960402938 %)
[2025-10-12 10:41:02] 2025-10-12 14:40:13,171 | INFO     | right removable region: 614
[2025-10-12 10:41:02] 2025-10-12 14:40:13,172 | INFO     | sum of square deviations: 72124611472.43263
[2025-10-12 10:41:02] 2025-10-12 14:40:13,199 | INFO     | sum of deviations: 71303061080.71718
[2025-10-12 10:41:02] 2025-10-12 14:40:13,199 | INFO     | mean x: 1760261181.2471545
[2025-10-12 10:41:02] 2025-10-12 14:40:13,199 | INFO     | mean y: 2110715.4097560975
[2025-10-12 10:41:02] 2025-10-12 14:40:13,199 | INFO     | -- intersect: -1738099844.649264
[2025-10-12 10:41:02] 2025-10-12 14:40:13,199 | INFO     | intersect: -1738099844.649264
[2025-10-12 10:41:02] 2025-10-12 14:40:13,212 | INFO     | chi2: 1.3934100589361167
[2025-10-12 10:41:02] 2025-10-12 14:40:13,212 | INFO     | current chi2=1.3934100589361167 (change=60.625596964349725 %)
[2025-10-12 10:41:02] 2025-10-12 14:40:13,213 | INFO     | sum of square deviations: 70379611464.6246
[2025-10-12 10:41:02] 2025-10-12 14:40:13,312 | INFO     | sum of deviations: 23055797831.265568
[2025-10-12 10:41:02] 2025-10-12 14:40:13,313 | INFO     | mean x: 1760261333.7491803
[2025-10-12 10:41:02] 2025-10-12 14:40:13,313 | INFO     | mean y: 2114925.531147541
[2025-10-12 10:41:02] 2025-10-12 14:40:13,313 | INFO     | -- intersect: -574532609.1247395
[2025-10-12 10:41:02] 2025-10-12 14:40:13,313 | INFO     | intersect: -574532609.1247395
[2025-10-12 10:41:02] 2025-10-12 14:40:13,314 | INFO     | chi2: 1.0719125245410979
[2025-10-12 10:41:02] 2025-10-12 14:40:13,314 | INFO     | current chi2=1.0719125245410979 (change=23.07271519487132 %)
[2025-10-12 10:41:02] 2025-10-12 14:40:13,314 | INFO     | left removable region: 20
[2025-10-12 10:41:02] 2025-10-12 14:40:13,315 | INFO     | sum of square deviations: 64985386458.61455
[2025-10-12 10:41:02] 2025-10-12 14:40:13,336 | INFO     | time since job start (38017s) is within the limit (172800.0s)
[2025-10-12 10:41:02] 2025-10-12 14:40:13,342 | INFO     | sum of deviations: 56150984861.08921
[2025-10-12 10:41:02] 2025-10-12 14:40:13,342 | INFO     | mean x: 1760261455.7457912
[2025-10-12 10:41:02] 2025-10-12 14:40:13,342 | INFO     | mean y: 2120109.7356902356
[2025-10-12 10:41:02] 2025-10-12 14:40:13,342 | INFO     | -- intersect: -1518843598.2525134
[2025-10-12 10:41:02] 2025-10-12 14:40:13,342 | INFO     | intersect: -1518843598.2525134
[2025-10-12 10:41:02] 2025-10-12 14:40:13,343 | INFO     | chi2: 0.3418874182959692
[2025-10-12 10:41:02] 2025-10-12 14:40:13,347 | INFO     | -- intersect: -1518843598.2525134
[2025-10-12 10:41:02] 2025-10-12 14:40:13,347 | INFO     | current memory leak: 0.86 B/s (using 594 data points, chi2=0.34)
[2025-10-12 10:41:02] 2025-10-12 14:40:13,348 | INFO     | could have reported an average CPU frequency of 3000 MHz (24 samples)
[2025-10-12 10:41:02] 2025-10-12 14:40:13,349 | INFO     | ..............................
[2025-10-12 10:41:02] 2025-10-12 14:40:13,349 | INFO     | . Timing measurements:
[2025-10-12 10:41:02] 2025-10-12 14:40:13,349 | INFO     | . get job = 0 s
[2025-10-12 10:41:02] 2025-10-12 14:40:13,349 | INFO     | . initial setup = 5 s
[2025-10-12 10:41:02] 2025-10-12 14:40:13,349 | INFO     | . payload setup = 46 s
[2025-10-12 10:41:02] 2025-10-12 14:40:13,349 | INFO     | . stage-in = 0 s
[2025-10-12 10:41:02] 2025-10-12 14:40:13,349 | INFO     | . payload execution = 37850 s
[2025-10-12 10:41:02] 2025-10-12 14:40:13,349 | INFO     | . stage-out = 9 s
[2025-10-12 10:41:02] 2025-10-12 14:40:13,349 | INFO     | . log creation = 1 s
[2025-10-12 10:41:02] 2025-10-12 14:40:13,349 | INFO     | ..............................
[2025-10-12 10:41:02] 2025-10-12 14:40:13,538 | INFO     | 
[2025-10-12 10:41:02] 2025-10-12 14:40:13,539 | INFO     | job summary report
[2025-10-12 10:41:02] 2025-10-12 14:40:13,539 | INFO     | --------------------------------------------------
[2025-10-12 10:41:02] 2025-10-12 14:40:13,539 | INFO     | PanDA job id: 6838990832
[2025-10-12 10:41:02] 2025-10-12 14:40:13,539 | INFO     | task id: 46676269
[2025-10-12 10:41:02] 2025-10-12 14:40:13,539 | INFO     | errors: (none)
[2025-10-12 10:41:02] 2025-10-12 14:40:13,539 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 10:41:02] 2025-10-12 14:40:13,539 | INFO     | pilot state: finished 
[2025-10-12 10:41:02] 2025-10-12 14:40:13,539 | INFO     | transexitcode: 0
[2025-10-12 10:41:02] 2025-10-12 14:40:13,539 | INFO     | exeerrorcode: 0
[2025-10-12 10:41:02] 2025-10-12 14:40:13,539 | INFO     | exeerrordiag: 
[2025-10-12 10:41:02] 2025-10-12 14:40:13,540 | INFO     | exitcode: 0
[2025-10-12 10:41:02] 2025-10-12 14:40:13,540 | INFO     | exitmsg: OK
[2025-10-12 10:41:02] 2025-10-12 14:40:13,540 | INFO     | cpuconsumptiontime: 43695 s
[2025-10-12 10:41:02] 2025-10-12 14:40:13,540 | INFO     | nevents: 400
[2025-10-12 10:41:02] 2025-10-12 14:40:13,540 | INFO     | neventsw: 0
[2025-10-12 10:41:02] 2025-10-12 14:40:13,540 | INFO     | pid: 1969456
[2025-10-12 10:41:02] 2025-10-12 14:40:13,540 | INFO     | pgrp: 1969456
[2025-10-12 10:41:02] 2025-10-12 14:40:13,540 | INFO     | corecount: 9
[2025-10-12 10:41:02] 2025-10-12 14:40:13,540 | INFO     | event service: False
[2025-10-12 10:41:02] 2025-10-12 14:40:13,540 | INFO     | sizes: {0: 2348686, 1: 2348885, 12: 2348885, 23: 2348913, 31: 2349203, 34: 2349231, 37902: 2389236, 37903: 2389235, 37913: 2398289, 37915: 2398345, 37948: 2398539}
[2025-10-12 10:41:02] 2025-10-12 14:40:13,540 | INFO     | --------------------------------------------------
[2025-10-12 10:41:02] 2025-10-12 14:40:13,540 | INFO     | 
[2025-10-12 10:41:02] 2025-10-12 14:40:13,541 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2025-10-12 10:41:02] 2025-10-12 14:40:13,647 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 10:41:02] 2025-10-12 14:40:13,648 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 10:41:02] 2025-10-12 14:40:13,648 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 10:41:02] 2025-10-12 14:40:13,648 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 10:41:02] 2025-10-12 14:40:13,648 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 10:41:02] 2025-10-12 14:40:13,648 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 10:41:02] 2025-10-12 14:40:13,648 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 10:41:02] 2025-10-12 14:40:13,648 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 10:41:02] 2025-10-12 14:40:13,648 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 10:41:02] 2025-10-12 14:40:13,648 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 10:41:02] 2025-10-12 14:40:13,648 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 10:41:02] 2025-10-12 14:40:13,648 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 10:41:02] 2025-10-12 14:40:13,649 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 10:41:02] 2025-10-12 14:40:13,649 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 10:41:02] 2025-10-12 14:40:13,649 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 10:41:02] 2025-10-12 14:40:13,649 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 10:41:02] 2025-10-12 14:40:13,649 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 10:41:02] 2025-10-12 14:40:13,649 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 10:41:02] 2025-10-12 14:40:13,649 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 10:41:02] 2025-10-12 14:40:13,649 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 10:41:02] 2025-10-12 14:40:13,649 | INFO     | job 6838990832 has completed (purged errors)
[2025-10-12 10:41:02] 2025-10-12 14:40:13,649 | INFO     | overall cleanup function is called
[2025-10-12 10:41:02] 2025-10-12 14:40:14,659 | INFO     | --- collectZombieJob: --- 10, [1969456]
[2025-10-12 10:41:02] 2025-10-12 14:40:14,659 | INFO     | zombie collector waiting for pid 1969456
[2025-10-12 10:41:02] 2025-10-12 14:40:14,659 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 10:41:02] 2025-10-12 14:40:14,660 | INFO     | collected zombie processes
[2025-10-12 10:41:02] 2025-10-12 14:40:14,660 | INFO     | will attempt to kill all subprocesses of pid=1969456
[2025-10-12 10:41:02] 2025-10-12 14:40:16,826 | INFO     | process IDs to be killed: [1969456] (in reverse order)
[2025-10-12 10:41:02] 2025-10-12 14:40:17,065 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 10:41:02] 2025-10-12 14:40:17,065 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 10:41:02] 2025-10-12 14:40:17,089 | INFO     | did not find any defunct processes belonging to 1969456
[2025-10-12 10:41:02] 2025-10-12 14:40:17,112 | INFO     | did not find any defunct processes belonging to 1969456
[2025-10-12 10:41:02] 2025-10-12 14:40:17,113 | INFO     | ready for new job
[2025-10-12 10:41:02] 2025-10-12 14:40:17,113 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 10:41:02] 2025-10-12 14:40:17,116 | INFO     | ***************************************
[2025-10-12 10:41:02] 2025-10-12 14:40:17,116 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 10:41:02] 2025-10-12 14:40:17,116 | INFO     | ***************************************
[2025-10-12 10:41:02] 2025-10-12 14:40:17,116 | INFO     | 
[2025-10-12 10:41:02] 2025-10-12 14:40:17,137 | INFO     | architecture information:
[2025-10-12 10:41:02] 2025-10-12 14:40:17,142 | INFO     | executing command: cat /etc/os-release
[2025-10-12 10:41:02] 2025-10-12 14:40:17,182 | INFO     | cat /etc/os-release:
[2025-10-12 10:41:02] NAME="CentOS Linux"
[2025-10-12 10:41:02] VERSION="7 (Core)"
[2025-10-12 10:41:02] ID="centos"
[2025-10-12 10:41:02] ID_LIKE="rhel fedora"
[2025-10-12 10:41:02] VERSION_ID="7"
[2025-10-12 10:41:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 10:41:02] ANSI_COLOR="0;31"
[2025-10-12 10:41:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 10:41:02] HOME_URL="https://www.centos.org/"
[2025-10-12 10:41:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 10:41:02] 
[2025-10-12 10:41:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 10:41:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 10:41:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 10:41:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 10:41:02] 
[2025-10-12 10:41:02] 2025-10-12 14:40:17,183 | INFO     | ***************************************
[2025-10-12 10:41:02] 2025-10-12 14:40:17,696 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2025-10-12 10:41:02] 2025-10-12 14:40:17,844 | INFO     | sufficient remaining disk space (73925656576 B)
[2025-10-12 10:41:02] 2025-10-12 14:40:17,844 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 10:41:02] 2025-10-12 14:40:17,844 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 10:41:02] 2025-10-12 14:40:17,844 | INFO     | update_server=False
[2025-10-12 10:41:02] 2025-10-12 14:40:17,844 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 10:41:02] 2025-10-12 14:40:17,845 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 10:41:02] 2025-10-12 14:40:17,845 | INFO     | aborting loop
[2025-10-12 10:41:02] 2025-10-12 14:40:18,561 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 10:41:02] 2025-10-12 14:40:18,670 | INFO     | all data control threads have been joined
[2025-10-12 10:41:02] 2025-10-12 14:40:18,754 | INFO     | all job control threads have been joined
[2025-10-12 10:41:02] 2025-10-12 14:40:18,850 | INFO     | [job] retrieve thread has finished
[2025-10-12 10:41:02] 2025-10-12 14:40:18,851 | INFO     | [job] job monitor thread has finished
[2025-10-12 10:41:02] 2025-10-12 14:40:18,901 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 10:41:02] 2025-10-12 14:40:18,902 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 10:41:02] 2025-10-12 14:40:18,935 | INFO     | all payload control threads have been joined
[2025-10-12 10:41:02] 2025-10-12 14:40:18,949 | INFO     | [payload] validate_post thread has finished
[2025-10-12 10:41:02] 2025-10-12 14:40:18,974 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 10:41:02] 2025-10-12 14:40:19,064 | INFO     | [data] copytool_in thread has finished
[2025-10-12 10:41:02] 2025-10-12 14:40:19,075 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 10:41:02] 2025-10-12 14:40:19,076 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 10:41:02] 2025-10-12 14:40:19,347 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 10:41:02] 2025-10-12 14:40:19,567 | INFO     | [job] queue monitor thread has finished
[2025-10-12 10:41:02] 2025-10-12 14:40:19,676 | INFO     | [data] control thread has finished
[2025-10-12 10:41:02] 2025-10-12 14:40:19,760 | INFO     | [job] control thread has finished
[2025-10-12 10:41:02] 2025-10-12 14:40:19,921 | INFO     | [job] validate thread has finished
[2025-10-12 10:41:02] 2025-10-12 14:40:19,946 | INFO     | [payload] control thread has finished
[2025-10-12 10:41:02] 2025-10-12 14:40:20,329 | INFO     | [payload] failed_post thread has finished
[2025-10-12 10:41:02] 2025-10-12 14:40:21,354 | INFO     | [data] copytool_out thread has finished
[2025-10-12 10:41:02] 2025-10-12 14:40:22,987 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 10:41:02] 2025-10-12 14:40:47,361 | INFO     | PID=1928665 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 10:41:02] 2025-10-12 14:40:47,362 | INFO     | .. there are 80 such processes running
[2025-10-12 10:41:02] 2025-10-12 14:40:47,362 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 10:41:02] 2025-10-12 14:40:47,363 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 10:41:02] 2025-10-12 14:40:47,363 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 10:41:02] 2025-10-12 14:40:54,129 | INFO     | [monitor] cgroup control has ended
[2025-10-12 10:41:02] 2025-10-12 14:40:55,139 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139818147239744)>', '<ExcThread(monitor, started 139817778124544)>']
[2025-10-12 10:41:02] 2025-10-12 14:40:55,413 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 10:41:02] 2025-10-12 14:40:55,413 | INFO     | [monitor] control thread has ended
[2025-10-12 10:41:02] 2025-10-12 14:41:00,166 | INFO     | all workflow threads have been joined
[2025-10-12 10:41:02] 2025-10-12 14:41:00,166 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 10:41:02] 2025-10-12 14:41:00,172 | INFO     | traces error code: 0
[2025-10-12 10:41:02] 2025-10-12 14:41:00,172 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 10:41:02] 2025-10-12 14:41:00,887 [wrapper] ==== pilot stdout END ====
[2025-10-12 10:41:02] 2025-10-12 14:41:00,902 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 10:41:02] 2025-10-12 14:41:00,937 [wrapper] pilotpid: 1928665
[2025-10-12 10:41:02] 2025-10-12 14:41:00,954 [wrapper] Pilot exit status: 0
[2025-10-12 10:41:02] 2025-10-12 14:41:01,041 [wrapper] pandaids: 6838990832
[2025-10-12 10:41:02] 2025-10-12 14:41:01,215 [wrapper] cleanup supervisor_pilot  881209 1928666
[2025-10-12 10:41:02] 2025-10-12 14:41:01,222 [wrapper] Test setup, not cleaning
[2025-10-12 10:41:02] 2025-10-12 14:41:01,245 [wrapper] apfmon messages muted
[2025-10-12 10:41:02] 2025-10-12 14:41:01,264 [wrapper] ==== wrapper stdout END ====
[2025-10-12 10:41:02] 2025-10-12 14:41:01,291 [wrapper] ==== wrapper stderr END ====
[2025-10-12 10:41:02]  *** Error codes and diagnostics ***
[2025-10-12 10:41:02]     "exeErrorCode": 0,
[2025-10-12 10:41:02]     "exeErrorDiag": "",
[2025-10-12 10:41:02]     "pilotErrorCode": 0,
[2025-10-12 10:41:02]     "pilotErrorDiag": "",
[2025-10-12 10:41:02]  *** Listing of results directory ***
[2025-10-12 10:41:02] total 418264
[2025-10-12 10:41:02] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 18:51 pilot3.tar.gz
[2025-10-12 10:41:02] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 18:56 queuedata.json
[2025-10-12 10:41:02] -rwx------. 1 boincer umatlas     36292 Oct 11 18:56 runpilot2-wrapper.sh
[2025-10-12 10:41:02] -rw-r--r--. 1 boincer umatlas       100 Oct 12 00:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 10:41:02] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 00:05 run_atlas
[2025-10-12 10:41:02] -rw-r--r--. 1 boincer umatlas       105 Oct 12 00:05 job.xml
[2025-10-12 10:41:02] -rw-r--r--. 2 boincer umatlas 220585407 Oct 12 00:05 EVNT.46676267._002672.pool.root.1
[2025-10-12 10:41:02] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:05 start_atlas.sh
[2025-10-12 10:41:02] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 00:05 shared
[2025-10-12 10:41:02] -rw-r--r--. 2 boincer umatlas    569681 Oct 12 00:05 input.tar.gz
[2025-10-12 10:41:02] -rw-r--r--. 1 boincer umatlas         0 Oct 12 00:05 boinc_lockfile
[2025-10-12 10:41:02] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 00:05 pandaJob.out
[2025-10-12 10:41:02] -rw-------. 1 boincer umatlas    975512 Oct 12 00:06 agis_schedconf.cvmfs.json
[2025-10-12 10:41:02] drwx------. 5 boincer umatlas      4096 Oct 12 00:06 pilot3
[2025-10-12 10:41:02] -rw-r--r--. 1 boincer umatlas      6840 Oct 12 10:36 init_data.xml
[2025-10-12 10:41:02] -rw-r--r--. 1 boincer umatlas       531 Oct 12 10:37 boinc_task_state.xml
[2025-10-12 10:41:02] -rw-------. 1 boincer umatlas 194978896 Oct 12 10:37 HITS.46676269._066321.pool.root.1
[2025-10-12 10:41:02] -rw-------. 1 boincer umatlas      1045 Oct 12 10:39 memory_monitor_summary.json
[2025-10-12 10:41:02] -rw-------. 1 boincer umatlas   1560580 Oct 12 10:39 agis_ddmendpoints.agis.ALL.json
[2025-10-12 10:41:02] -rw-------. 1 boincer umatlas    702314 Oct 12 10:39 log.46676269._066321.job.log.tgz.1
[2025-10-12 10:41:02] -rw-------. 1 boincer umatlas      7823 Oct 12 10:40 heartbeat.json
[2025-10-12 10:41:02] -rw-------. 1 boincer umatlas        95 Oct 12 10:40 pilot_heartbeat.json
[2025-10-12 10:41:02] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 10:40 boinc_mmap_file
[2025-10-12 10:41:02] -rw-r--r--. 1 boincer umatlas        28 Oct 12 10:40 wrapper_checkpoint.txt
[2025-10-12 10:41:02] -rw-------. 1 boincer umatlas      4824 Oct 12 10:41 pilotlog.txt
[2025-10-12 10:41:02] -rw-------. 1 boincer umatlas   3715471 Oct 12 10:41 log.46676269._066321.job.log.1
[2025-10-12 10:41:02] -rw-------. 1 boincer umatlas       357 Oct 12 10:41 output.list
[2025-10-12 10:41:02] -rw-r--r--. 1 boincer umatlas       620 Oct 12 10:41 runtime_log
[2025-10-12 10:41:02] -rw-------. 1 boincer umatlas   4433920 Oct 12 10:41 result.tar.gz
[2025-10-12 10:41:02] -rw-r--r--. 1 boincer umatlas      8694 Oct 12 10:41 runtime_log.err
[2025-10-12 10:41:02] -rw-------. 1 boincer umatlas       656 Oct 12 10:41 ew8LDmFhxR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmSjSMDmIlrMSn.diag
[2025-10-12 10:41:02] -rw-r--r--. 1 boincer umatlas     21254 Oct 12 10:41 stderr.txt
[2025-10-12 10:41:02] HITS file was successfully produced:
[2025-10-12 10:41:02] -rw-------. 1 boincer umatlas 194978896 Oct 12 10:37 shared/HITS.pool.root.1
[2025-10-12 10:41:02]  *** Contents of shared directory: ***
[2025-10-12 10:41:02] total 410740
[2025-10-12 10:41:02] -rw-r--r--. 2 boincer umatlas 220585407 Oct 12 00:05 ATLAS.root_0
[2025-10-12 10:41:02] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:05 start_atlas.sh
[2025-10-12 10:41:02] -rw-r--r--. 2 boincer umatlas    569681 Oct 12 00:05 input.tar.gz
[2025-10-12 10:41:02] -rw-------. 1 boincer umatlas 194978896 Oct 12 10:37 HITS.pool.root.1
[2025-10-12 10:41:02] -rw-------. 1 boincer umatlas   4433920 Oct 12 10:41 result.tar.gz
10:41:03 (1914724): run_atlas exited; CPU time 45615.912147
10:41:03 (1914724): called boinc_finish(0)

</stderr_txt>
]]>

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