Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:04:51 (1912473): wrapper (7.7.26015): starting
00:04:51 (1912473): wrapper: running run_atlas (--nthreads 9)
[2025-10-12 00:04:51] Arguments: --nthreads 9
[2025-10-12 00:04:51] Threads: 9
[2025-10-12 00:04:51] Checking for CVMFS
[2025-10-12 00:04:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 00:04:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 00:04:52] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 00:04:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 00:04:54] 2.13.2.0 1588522 128757 671956 151607 3 57 25390096 32935936 61876 16776704 0 188963587 99.745 124766574 20516 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 00:04:54] CVMFS is ok
[2025-10-12 00:04:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 00:04:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 00:04:54] Further information can be found at the LHC@home message board.
[2025-10-12 00:04:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 00:04:54] Checking for apptainer binary...
[2025-10-12 00:04:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 00:04:54] Running /usr/bin/apptainer --version
[2025-10-12 00:04:54] apptainer version 1.4.3-1.el9
[2025-10-12 00:04:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 00:04:55] c-3-40.aglt2.org
[2025-10-12 00:04:55] apptainer works
[2025-10-12 00:04:55] Set ATHENA_PROC_NUMBER=9
[2025-10-12 00:04:55] Set ATHENA_CORE_NUMBER=9
[2025-10-12 00:04:55] Starting ATLAS job with PandaID=6839242482
[2025-10-12 00:04:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 10:45:49]  *** The last 200 lines of the pilot log: ***
[2025-10-12 10:45:49] 2025-10-12 14:44:32,516 | INFO     | time since job start (38294s) is within the limit (172800.0s)
[2025-10-12 10:45:49] 2025-10-12 14:44:32,795 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-12 10:45:49] 2025-10-12 14:44:32,837 | INFO     | found 40 cores (20 cores per socket, 2 sockets) HT, CPU MHz: 3011.6898625000003
[2025-10-12 10:45:49] 2025-10-12 14:44:32,932 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6839242482/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 10:45:49] 2025-10-12 14:44:32,933 | INFO     | extracted standard info from prmon json
[2025-10-12 10:45:49] 2025-10-12 14:44:32,933 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 10:45:49] 2025-10-12 14:44:32,933 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 10:45:49] 2025-10-12 14:44:32,934 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 10:45:49] 2025-10-12 14:44:32,934 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 10:45:49] 2025-10-12 14:44:33,000 | INFO     | fitting pss+swap vs Time
[2025-10-12 10:45:49] 2025-10-12 14:44:33,002 | INFO     | sum of square deviations: 75701124856.7937
[2025-10-12 10:45:49] 2025-10-12 14:44:33,082 | INFO     | sum of deviations: 207210431909.74286
[2025-10-12 10:45:49] 2025-10-12 14:44:33,083 | INFO     | mean x: 1760261161.1968
[2025-10-12 10:45:49] 2025-10-12 14:44:33,083 | INFO     | mean y: 2102197.5712
[2025-10-12 10:45:49] 2025-10-12 14:44:33,083 | INFO     | -- intersect: -4816115182.626697
[2025-10-12 10:45:49] 2025-10-12 14:44:33,083 | INFO     | intersect: -4816115182.626697
[2025-10-12 10:45:49] 2025-10-12 14:44:33,084 | INFO     | chi2: 4.072772325739379
[2025-10-12 10:45:49] 2025-10-12 14:44:33,084 | INFO     | sum of square deviations: 73898765786.59938
[2025-10-12 10:45:49] 2025-10-12 14:44:33,153 | INFO     | monitor loop #1934: job 0:6839242482 is in state 'finished'
[2025-10-12 10:45:49] 2025-10-12 14:44:33,153 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 10:45:49] 2025-10-12 14:44:33,156 | INFO     | sum of deviations: 255604898986.48895
[2025-10-12 10:45:49] 2025-10-12 14:44:33,156 | INFO     | mean x: 1760261008.6983871
[2025-10-12 10:45:49] 2025-10-12 14:44:33,157 | INFO     | mean y: 2106270.7887096773
[2025-10-12 10:45:49] 2025-10-12 14:44:33,157 | INFO     | -- intersect: -6086376162.294034
[2025-10-12 10:45:49] 2025-10-12 14:44:33,157 | INFO     | intersect: -6086376162.294034
[2025-10-12 10:45:49] 2025-10-12 14:44:33,157 | INFO     | chi2: 3.171662813763157
[2025-10-12 10:45:49] 2025-10-12 14:44:33,158 | INFO     | current chi2=3.171662813763157 (change=22.125212015445353 %)
[2025-10-12 10:45:49] 2025-10-12 14:44:33,158 | INFO     | right removable region: 619
[2025-10-12 10:45:49] 2025-10-12 14:44:33,158 | INFO     | sum of square deviations: 73898728636.99358
[2025-10-12 10:45:49] 2025-10-12 14:44:33,218 | INFO     | sum of deviations: 85771836784.07108
[2025-10-12 10:45:49] 2025-10-12 14:44:33,218 | INFO     | mean x: 1760261313.6967742
[2025-10-12 10:45:49] 2025-10-12 14:44:33,218 | INFO     | mean y: 2112455.835483871
[2025-10-12 10:45:49] 2025-10-12 14:44:33,218 | INFO     | -- intersect: -2040965265.2625961
[2025-10-12 10:45:49] 2025-10-12 14:44:33,218 | INFO     | intersect: -2040965265.2625961
[2025-10-12 10:45:49] 2025-10-12 14:44:33,219 | INFO     | chi2: 1.9566750895834593
[2025-10-12 10:45:49] 2025-10-12 14:44:33,219 | INFO     | current chi2=1.9566750895834593 (change=51.95716988112659 %)
[2025-10-12 10:45:49] 2025-10-12 14:44:33,220 | INFO     | sum of square deviations: 72125132591.79831
[2025-10-12 10:45:49] 2025-10-12 14:44:33,306 | INFO     | sum of deviations: 32818581795.2146
[2025-10-12 10:45:49] 2025-10-12 14:44:33,307 | INFO     | mean x: 1760261466.198374
[2025-10-12 10:45:49] 2025-10-12 14:44:33,307 | INFO     | mean y: 2117004.0146341464
[2025-10-12 10:45:49] 2025-10-12 14:44:33,307 | INFO     | -- intersect: -798842146.1937765
[2025-10-12 10:45:49] 2025-10-12 14:44:33,307 | INFO     | intersect: -798842146.1937765
[2025-10-12 10:45:49] 2025-10-12 14:44:33,308 | INFO     | chi2: 1.5792156349817428
[2025-10-12 10:45:49] 2025-10-12 14:44:33,351 | INFO     | current chi2=1.5792156349817428 (change=19.290860123438826 %)
[2025-10-12 10:45:49] 2025-10-12 14:44:33,351 | INFO     | left removable region: 20
[2025-10-12 10:45:49] 2025-10-12 14:44:33,352 | INFO     | sum of square deviations: 66640980412.146835
[2025-10-12 10:45:49] 2025-10-12 14:44:33,365 | INFO     | sum of deviations: 26294389771.63434
[2025-10-12 10:45:49] 2025-10-12 14:44:33,386 | INFO     | mean x: 1760261588.1953256
[2025-10-12 10:45:49] 2025-10-12 14:44:33,387 | INFO     | mean y: 2126197.797996661
[2025-10-12 10:45:49] 2025-10-12 14:44:33,387 | INFO     | -- intersect: -692416469.6986462
[2025-10-12 10:45:49] 2025-10-12 14:44:33,387 | INFO     | intersect: -692416469.6986462
[2025-10-12 10:45:49] 2025-10-12 14:44:33,388 | INFO     | chi2: 0.44855232942844453
[2025-10-12 10:45:49] 2025-10-12 14:44:33,388 | INFO     | -- intersect: -692416469.6986462
[2025-10-12 10:45:49] 2025-10-12 14:44:33,388 | INFO     | current memory leak: 0.39 B/s (using 599 data points, chi2=0.45)
[2025-10-12 10:45:49] 2025-10-12 14:44:33,389 | INFO     | could have reported an average CPU frequency of 3007 MHz (24 samples)
[2025-10-12 10:45:49] 2025-10-12 14:44:33,389 | INFO     | ..............................
[2025-10-12 10:45:49] 2025-10-12 14:44:33,389 | INFO     | . Timing measurements:
[2025-10-12 10:45:49] 2025-10-12 14:44:33,390 | INFO     | . get job = 0 s
[2025-10-12 10:45:49] 2025-10-12 14:44:33,390 | INFO     | . initial setup = 8 s
[2025-10-12 10:45:49] 2025-10-12 14:44:33,390 | INFO     | . payload setup = 42 s
[2025-10-12 10:45:49] 2025-10-12 14:44:33,390 | INFO     | . stage-in = 0 s
[2025-10-12 10:45:49] 2025-10-12 14:44:33,390 | INFO     | . payload execution = 38145 s
[2025-10-12 10:45:49] 2025-10-12 14:44:33,404 | INFO     | . stage-out = 5 s
[2025-10-12 10:45:49] 2025-10-12 14:44:33,404 | INFO     | . log creation = 1 s
[2025-10-12 10:45:49] 2025-10-12 14:44:33,404 | INFO     | ..............................
[2025-10-12 10:45:49] 2025-10-12 14:44:34,091 | INFO     | 
[2025-10-12 10:45:49] 2025-10-12 14:44:34,091 | INFO     | job summary report
[2025-10-12 10:45:49] 2025-10-12 14:44:34,091 | INFO     | --------------------------------------------------
[2025-10-12 10:45:49] 2025-10-12 14:44:34,091 | INFO     | PanDA job id: 6839242482
[2025-10-12 10:45:49] 2025-10-12 14:44:34,092 | INFO     | task id: 46676269
[2025-10-12 10:45:49] 2025-10-12 14:44:34,092 | INFO     | errors: (none)
[2025-10-12 10:45:49] 2025-10-12 14:44:34,092 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 10:45:49] 2025-10-12 14:44:34,092 | INFO     | pilot state: finished 
[2025-10-12 10:45:49] 2025-10-12 14:44:34,092 | INFO     | transexitcode: 0
[2025-10-12 10:45:49] 2025-10-12 14:44:34,092 | INFO     | exeerrorcode: 0
[2025-10-12 10:45:49] 2025-10-12 14:44:34,092 | INFO     | exeerrordiag: 
[2025-10-12 10:45:49] 2025-10-12 14:44:34,094 | INFO     | exitcode: 0
[2025-10-12 10:45:49] 2025-10-12 14:44:34,094 | INFO     | exitmsg: OK
[2025-10-12 10:45:49] 2025-10-12 14:44:34,094 | INFO     | cpuconsumptiontime: 44037 s
[2025-10-12 10:45:49] 2025-10-12 14:44:34,094 | INFO     | nevents: 400
[2025-10-12 10:45:49] 2025-10-12 14:44:34,094 | INFO     | neventsw: 0
[2025-10-12 10:45:49] 2025-10-12 14:44:34,094 | INFO     | pid: 1956998
[2025-10-12 10:45:49] 2025-10-12 14:44:34,094 | INFO     | pgrp: 1956998
[2025-10-12 10:45:49] 2025-10-12 14:44:34,095 | INFO     | corecount: 9
[2025-10-12 10:45:49] 2025-10-12 14:44:34,095 | INFO     | event service: False
[2025-10-12 10:45:49] 2025-10-12 14:44:34,095 | INFO     | sizes: {0: 2348630, 1: 2348686, 2: 2348913, 3: 2348913, 14: 2348941, 25: 2348969, 34: 2349387, 36: 2349415, 38191: 2391207, 38197: 2400205, 38199: 2400261, 38229: 
[2025-10-12 10:45:49] 2025-10-12 14:44:34,095 | INFO     | --------------------------------------------------
[2025-10-12 10:45:49] 2025-10-12 14:44:34,095 | INFO     | 
[2025-10-12 10:45:49] 2025-10-12 14:44:34,113 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-10-12 10:45:49] 2025-10-12 14:44:34,246 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 10:45:49] 2025-10-12 14:44:34,247 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 10:45:49] 2025-10-12 14:44:34,247 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 10:45:49] 2025-10-12 14:44:34,247 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 10:45:49] 2025-10-12 14:44:34,247 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 10:45:49] 2025-10-12 14:44:34,247 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 10:45:49] 2025-10-12 14:44:34,247 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 10:45:49] 2025-10-12 14:44:34,247 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 10:45:49] 2025-10-12 14:44:34,247 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 10:45:49] 2025-10-12 14:44:34,247 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 10:45:49] 2025-10-12 14:44:34,248 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 10:45:49] 2025-10-12 14:44:34,248 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 10:45:49] 2025-10-12 14:44:34,248 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 10:45:49] 2025-10-12 14:44:34,248 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 10:45:49] 2025-10-12 14:44:34,248 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 10:45:49] 2025-10-12 14:44:34,248 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 10:45:49] 2025-10-12 14:44:34,248 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 10:45:49] 2025-10-12 14:44:34,248 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 10:45:49] 2025-10-12 14:44:34,248 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 10:45:49] 2025-10-12 14:44:34,248 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 10:45:49] 2025-10-12 14:44:34,248 | INFO     | job 6839242482 has completed (purged errors)
[2025-10-12 10:45:49] 2025-10-12 14:44:34,249 | INFO     | overall cleanup function is called
[2025-10-12 10:45:49] 2025-10-12 14:44:35,283 | INFO     | --- collectZombieJob: --- 10, [1956998]
[2025-10-12 10:45:49] 2025-10-12 14:44:35,283 | INFO     | zombie collector waiting for pid 1956998
[2025-10-12 10:45:49] 2025-10-12 14:44:35,283 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 10:45:49] 2025-10-12 14:44:35,284 | INFO     | collected zombie processes
[2025-10-12 10:45:49] 2025-10-12 14:44:35,284 | INFO     | will attempt to kill all subprocesses of pid=1956998
[2025-10-12 10:45:49] 2025-10-12 14:44:37,533 | INFO     | process IDs to be killed: [1956998] (in reverse order)
[2025-10-12 10:45:49] 2025-10-12 14:44:37,810 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 10:45:49] 2025-10-12 14:44:37,810 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 10:45:49] 2025-10-12 14:44:37,972 | INFO     | did not find any defunct processes belonging to 1956998
[2025-10-12 10:45:49] 2025-10-12 14:44:38,145 | INFO     | did not find any defunct processes belonging to 1956998
[2025-10-12 10:45:49] 2025-10-12 14:44:38,146 | INFO     | ready for new job
[2025-10-12 10:45:49] 2025-10-12 14:44:38,146 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 10:45:49] 2025-10-12 14:44:38,190 | INFO     | ***************************************
[2025-10-12 10:45:49] 2025-10-12 14:44:38,191 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 10:45:49] 2025-10-12 14:44:38,191 | INFO     | ***************************************
[2025-10-12 10:45:49] 2025-10-12 14:44:38,191 | INFO     | 
[2025-10-12 10:45:49] 2025-10-12 14:44:38,213 | INFO     | architecture information:
[2025-10-12 10:45:49] 2025-10-12 14:44:38,224 | INFO     | executing command: cat /etc/os-release
[2025-10-12 10:45:49] 2025-10-12 14:44:38,307 | INFO     | cat /etc/os-release:
[2025-10-12 10:45:49] NAME="CentOS Linux"
[2025-10-12 10:45:49] VERSION="7 (Core)"
[2025-10-12 10:45:49] ID="centos"
[2025-10-12 10:45:49] ID_LIKE="rhel fedora"
[2025-10-12 10:45:49] VERSION_ID="7"
[2025-10-12 10:45:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 10:45:49] ANSI_COLOR="0;31"
[2025-10-12 10:45:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 10:45:49] HOME_URL="https://www.centos.org/"
[2025-10-12 10:45:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 10:45:49] 
[2025-10-12 10:45:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 10:45:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 10:45:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 10:45:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 10:45:49] 
[2025-10-12 10:45:49] 2025-10-12 14:44:38,308 | INFO     | ***************************************
[2025-10-12 10:45:49] 2025-10-12 14:44:38,811 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-10-12 10:45:49] 2025-10-12 14:44:38,968 | INFO     | sufficient remaining disk space (74116497408 B)
[2025-10-12 10:45:49] 2025-10-12 14:44:38,968 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 10:45:49] 2025-10-12 14:44:38,968 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 10:45:49] 2025-10-12 14:44:38,969 | INFO     | update_server=False
[2025-10-12 10:45:49] 2025-10-12 14:44:38,969 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 10:45:49] 2025-10-12 14:44:38,980 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 10:45:49] 2025-10-12 14:44:39,191 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 10:45:49] 2025-10-12 14:44:39,191 | INFO     | aborting loop
[2025-10-12 10:45:49] 2025-10-12 14:44:39,487 | INFO     | all data control threads have been joined
[2025-10-12 10:45:49] 2025-10-12 14:44:39,720 | INFO     | all payload control threads have been joined
[2025-10-12 10:45:49] 2025-10-12 14:44:39,985 | INFO     | [job] retrieve thread has finished
[2025-10-12 10:45:49] 2025-10-12 14:44:39,986 | INFO     | [job] queue monitor thread has finished
[2025-10-12 10:45:49] 2025-10-12 14:44:40,190 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 10:45:49] 2025-10-12 14:44:40,197 | INFO     | [job] job monitor thread has finished
[2025-10-12 10:45:49] 2025-10-12 14:44:40,263 | INFO     | [payload] failed_post thread has finished
[2025-10-12 10:45:49] 2025-10-12 14:44:40,432 | INFO     | [data] copytool_in thread has finished
[2025-10-12 10:45:49] 2025-10-12 14:44:40,460 | INFO     | all job control threads have been joined
[2025-10-12 10:45:49] 2025-10-12 14:44:40,494 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 10:45:49] 2025-10-12 14:44:40,497 | INFO     | [data] control thread has finished
[2025-10-12 10:45:49] 2025-10-12 14:44:40,726 | INFO     | [payload] control thread has finished
[2025-10-12 10:45:49] 2025-10-12 14:44:40,989 | INFO     | [payload] validate_post thread has finished
[2025-10-12 10:45:49] 2025-10-12 14:44:41,010 | INFO     | [job] validate thread has finished
[2025-10-12 10:45:49] 2025-10-12 14:44:41,011 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 10:45:49] 2025-10-12 14:44:41,120 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 10:45:49] 2025-10-12 14:44:41,412 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 10:45:49] 2025-10-12 14:44:41,466 | INFO     | [job] control thread has finished
[2025-10-12 10:45:49] 2025-10-12 14:44:41,954 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 10:45:49] 2025-10-12 14:44:42,196 | INFO     | [data] copytool_out thread has finished
[2025-10-12 10:45:49] 2025-10-12 14:44:45,963 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 10:45:49] 2025-10-12 14:45:07,144 | INFO     | PID=1925539 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 10:45:49] 2025-10-12 14:45:07,144 | INFO     | .. there are 79 such processes running
[2025-10-12 10:45:49] 2025-10-12 14:45:07,145 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 10:45:49] 2025-10-12 14:45:07,145 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 10:45:49] 2025-10-12 14:45:07,145 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 10:45:49] 2025-10-12 14:45:26,842 | INFO     | [monitor] cgroup control has ended
[2025-10-12 10:45:49] 2025-10-12 14:45:26,984 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140417215981376)>', '<ExcThread(monitor, started 140416481478400)>']
[2025-10-12 10:45:49] 2025-10-12 14:45:27,289 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 10:45:49] 2025-10-12 14:45:27,289 | INFO     | [monitor] control thread has ended
[2025-10-12 10:45:49] 2025-10-12 14:45:32,009 | INFO     | all workflow threads have been joined
[2025-10-12 10:45:49] 2025-10-12 14:45:32,009 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 10:45:49] 2025-10-12 14:45:32,010 | INFO     | traces error code: 0
[2025-10-12 10:45:49] 2025-10-12 14:45:32,011 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 10:45:49] 2025-10-12 14:45:32,385 [wrapper] ==== pilot stdout END ====
[2025-10-12 10:45:49] 2025-10-12 14:45:32,397 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 10:45:49] 2025-10-12 14:45:32,424 [wrapper] pilotpid: 1925539
[2025-10-12 10:45:49] 2025-10-12 14:45:32,448 [wrapper] Pilot exit status: 0
[2025-10-12 10:45:49] 2025-10-12 14:45:32,535 [wrapper] pandaids: 6839242482
[2025-10-12 10:45:49] 2025-10-12 14:45:32,743 [wrapper] cleanup supervisor_pilot  879877 1925540
[2025-10-12 10:45:49] 2025-10-12 14:45:32,761 [wrapper] Test setup, not cleaning
[2025-10-12 10:45:49] 2025-10-12 14:45:32,771 [wrapper] apfmon messages muted
[2025-10-12 10:45:49] 2025-10-12 14:45:32,786 [wrapper] ==== wrapper stdout END ====
[2025-10-12 10:45:49] 2025-10-12 14:45:32,792 [wrapper] ==== wrapper stderr END ====
[2025-10-12 10:45:49]  *** Error codes and diagnostics ***
[2025-10-12 10:45:49]     "exeErrorCode": 0,
[2025-10-12 10:45:49]     "exeErrorDiag": "",
[2025-10-12 10:45:49]     "pilotErrorCode": 0,
[2025-10-12 10:45:49]     "pilotErrorDiag": "",
[2025-10-12 10:45:49]  *** Listing of results directory ***
[2025-10-12 10:45:49] total 419472
[2025-10-12 10:45:49] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 21:52 queuedata.json
[2025-10-12 10:45:49] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 21:53 pilot3.tar.gz
[2025-10-12 10:45:49] -rwx------. 1 boincer umatlas     36292 Oct 11 21:54 runpilot2-wrapper.sh
[2025-10-12 10:45:49] -rw-r--r--. 1 boincer umatlas       100 Oct 12 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 10:45:49] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 00:04 run_atlas
[2025-10-12 10:45:49] -rw-r--r--. 1 boincer umatlas       105 Oct 12 00:04 job.xml
[2025-10-12 10:45:49] -rw-r--r--. 2 boincer umatlas 219481618 Oct 12 00:04 EVNT.46676267._003169.pool.root.1
[2025-10-12 10:45:49] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:04 start_atlas.sh
[2025-10-12 10:45:49] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 00:04 shared
[2025-10-12 10:45:49] -rw-r--r--. 2 boincer umatlas    569682 Oct 12 00:04 input.tar.gz
[2025-10-12 10:45:49] -rw-r--r--. 1 boincer umatlas         0 Oct 12 00:04 boinc_lockfile
[2025-10-12 10:45:49] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 00:04 pandaJob.out
[2025-10-12 10:45:49] -rw-------. 1 boincer umatlas    975512 Oct 12 00:06 agis_schedconf.cvmfs.json
[2025-10-12 10:45:49] drwx------. 5 boincer umatlas      4096 Oct 12 00:06 pilot3
[2025-10-12 10:45:49] -rw-r--r--. 1 boincer umatlas      6840 Oct 12 10:36 init_data.xml
[2025-10-12 10:45:49] -rw-------. 1 boincer umatlas 196012414 Oct 12 10:43 HITS.46676269._069017.pool.root.1
[2025-10-12 10:45:49] -rw-r--r--. 1 boincer umatlas       531 Oct 12 10:43 boinc_task_state.xml
[2025-10-12 10:45:49] -rw-------. 1 boincer umatlas      1045 Oct 12 10:43 memory_monitor_summary.json
[2025-10-12 10:45:49] -rw-------. 1 boincer umatlas   1560580 Oct 12 10:43 agis_ddmendpoints.agis.ALL.json
[2025-10-12 10:45:49] -rw-------. 1 boincer umatlas    761843 Oct 12 10:44 log.46676269._069017.job.log.tgz.1
[2025-10-12 10:45:49] -rw-------. 1 boincer umatlas        95 Oct 12 10:44 pilot_heartbeat.json
[2025-10-12 10:45:49] -rw-------. 1 boincer umatlas      7824 Oct 12 10:44 heartbeat.json
[2025-10-12 10:45:49] -rw-------. 1 boincer umatlas      4824 Oct 12 10:45 pilotlog.txt
[2025-10-12 10:45:49] -rw-------. 1 boincer umatlas   4310410 Oct 12 10:45 log.46676269._069017.job.log.1
[2025-10-12 10:45:49] -rw-------. 1 boincer umatlas       357 Oct 12 10:45 output.list
[2025-10-12 10:45:49] -rw-r--r--. 1 boincer umatlas       620 Oct 12 10:45 runtime_log
[2025-10-12 10:45:49] -rw-------. 1 boincer umatlas   5089280 Oct 12 10:45 result.tar.gz
[2025-10-12 10:45:49] -rw-r--r--. 1 boincer umatlas      8694 Oct 12 10:45 runtime_log.err
[2025-10-12 10:45:49] -rw-------. 1 boincer umatlas       656 Oct 12 10:45 9sqLDmKT0R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm0HiNDmeic4yn.diag
[2025-10-12 10:45:49] -rw-r--r--. 1 boincer umatlas        28 Oct 12 10:45 wrapper_checkpoint.txt
[2025-10-12 10:45:49] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 10:45 boinc_mmap_file
[2025-10-12 10:45:49] -rw-r--r--. 1 boincer umatlas     21243 Oct 12 10:45 stderr.txt
[2025-10-12 10:45:49] HITS file was successfully produced:
[2025-10-12 10:45:49] -rw-------. 1 boincer umatlas 196012414 Oct 12 10:43 shared/HITS.pool.root.1
[2025-10-12 10:45:49]  *** Contents of shared directory: ***
[2025-10-12 10:45:49] total 411312
[2025-10-12 10:45:49] -rw-r--r--. 2 boincer umatlas 219481618 Oct 12 00:04 ATLAS.root_0
[2025-10-12 10:45:49] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:04 start_atlas.sh
[2025-10-12 10:45:49] -rw-r--r--. 2 boincer umatlas    569682 Oct 12 00:04 input.tar.gz
[2025-10-12 10:45:49] -rw-------. 1 boincer umatlas 196012414 Oct 12 10:43 HITS.pool.root.1
[2025-10-12 10:45:49] -rw-------. 1 boincer umatlas   5089280 Oct 12 10:45 result.tar.gz
10:45:51 (1912473): run_atlas exited; CPU time 46282.199507
10:45:51 (1912473): called boinc_finish(0)

</stderr_txt>
]]>

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