Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:39:40 (1365679): wrapper (7.7.26015): starting
05:39:40 (1365679): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 05:39:40] Arguments: --nthreads 8
[2025-10-12 05:39:40] Threads: 8
[2025-10-12 05:39:40] Checking for CVMFS
[2025-10-12 05:39:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 05:39:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 05:39:41] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 05:39:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 05:39:43] 2.13.2.0 3327531 23176 219760 151615 3 330 29590201 39288832 12507 16776704 0 26413320 99.718 20673932 33737 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 05:39:43] CVMFS is ok
[2025-10-12 05:39:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 05:39:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 05:39:43] Further information can be found at the LHC@home message board.
[2025-10-12 05:39:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 05:39:43] Checking for apptainer binary...
[2025-10-12 05:39:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 05:39:43] Running /usr/bin/apptainer --version
[2025-10-12 05:39:43] apptainer version 1.4.3-1.el9
[2025-10-12 05:39:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 05:39:43] c-210-1.aglt2.org
[2025-10-12 05:39:43] apptainer works
[2025-10-12 05:39:44] Set ATHENA_PROC_NUMBER=8
[2025-10-12 05:39:44] Set ATHENA_CORE_NUMBER=8
[2025-10-12 05:39:44] Starting ATLAS job with PandaID=6839162144
[2025-10-12 05:39:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 13:49:07]  *** The last 200 lines of the pilot log: ***
[2025-10-12 13:49:07] 2025-10-12 17:48:24,869 | INFO     | fitting pss+swap vs Time
[2025-10-12 13:49:07] 2025-10-12 17:48:24,875 | INFO     | sum of square deviations: 33442356606.983025
[2025-10-12 13:49:07] 2025-10-12 17:48:24,882 | INFO     | monitor loop #1767: job 0:6839162144 is in state 'finished'
[2025-10-12 13:49:07] 2025-10-12 17:48:24,971 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 13:49:07] 2025-10-12 17:48:24,963 | INFO     | sum of deviations: -2207848326.3362465
[2025-10-12 13:49:07] 2025-10-12 17:48:24,977 | INFO     | mean x: 1760276710.0462184
[2025-10-12 13:49:07] 2025-10-12 17:48:24,977 | INFO     | mean y: 2482238.9243697478
[2025-10-12 13:49:07] 2025-10-12 17:48:24,977 | INFO     | -- intersect: 118694862.15059006
[2025-10-12 13:49:07] 2025-10-12 17:48:24,978 | INFO     | intersect: 118694862.15059006
[2025-10-12 13:49:07] 2025-10-12 17:48:24,979 | INFO     | chi2: 4.422074656381381
[2025-10-12 13:49:07] 2025-10-12 17:48:24,980 | INFO     | sum of square deviations: 32399607896.47548
[2025-10-12 13:49:07] 2025-10-12 17:48:24,986 | INFO     | sum of deviations: 89672787581.26967
[2025-10-12 13:49:07] 2025-10-12 17:48:24,986 | INFO     | mean x: 1760276557.552017
[2025-10-12 13:49:07] 2025-10-12 17:48:24,986 | INFO     | mean y: 2495621.295116773
[2025-10-12 13:49:07] 2025-10-12 17:48:24,986 | INFO     | -- intersect: -4869443148.273199
[2025-10-12 13:49:07] 2025-10-12 17:48:24,986 | INFO     | intersect: -4869443148.273199
[2025-10-12 13:49:07] 2025-10-12 17:48:24,987 | INFO     | chi2: 2.21462344725434
[2025-10-12 13:49:07] 2025-10-12 17:48:24,987 | INFO     | current chi2=2.21462344725434 (change=49.91890414924419 %)
[2025-10-12 13:49:07] 2025-10-12 17:48:24,988 | INFO     | sum of square deviations: 31378679164.76396
[2025-10-12 13:49:07] 2025-10-12 17:48:24,994 | INFO     | sum of deviations: 88291399095.33904
[2025-10-12 13:49:07] 2025-10-12 17:48:24,994 | INFO     | mean x: 1760276405.0515022
[2025-10-12 13:49:07] 2025-10-12 17:48:24,994 | INFO     | mean y: 2495414.9442060087
[2025-10-12 13:49:07] 2025-10-12 17:48:24,994 | INFO     | -- intersect: -4950462157.949221
[2025-10-12 13:49:07] 2025-10-12 17:48:24,994 | INFO     | intersect: -4950462157.949221
[2025-10-12 13:49:07] 2025-10-12 17:48:24,995 | INFO     | chi2: 2.2150293850696117
[2025-10-12 13:49:07] 2025-10-12 17:48:24,995 | INFO     | current chi2=2.2150293850696117 (change=-0.018329879771441467 %)
[2025-10-12 13:49:07] 2025-10-12 17:48:24,995 | INFO     | right removable region: 465
[2025-10-12 13:49:07] 2025-10-12 17:48:24,996 | INFO     | sum of square deviations: 32399303259.902378
[2025-10-12 13:49:07] 2025-10-12 17:48:25,002 | INFO     | sum of deviations: -102835877385.64969
[2025-10-12 13:49:07] 2025-10-12 17:48:25,003 | INFO     | mean x: 1760276862.5626328
[2025-10-12 13:49:07] 2025-10-12 17:48:25,003 | INFO     | mean y: 2496909.3949044584
[2025-10-12 13:49:07] 2025-10-12 17:48:25,003 | INFO     | -- intersect: 5589642230.119078
[2025-10-12 13:49:07] 2025-10-12 17:48:25,003 | INFO     | intersect: 5589642230.119078
[2025-10-12 13:49:07] 2025-10-12 17:48:25,004 | INFO     | chi2: 2.4427486715693725
[2025-10-12 13:49:07] 2025-10-12 17:48:25,004 | INFO     | current chi2=2.4427486715693725 (change=44.760121404908766 %)
[2025-10-12 13:49:07] 2025-10-12 17:48:25,005 | INFO     | sum of square deviations: 31378243377.51913
[2025-10-12 13:49:07] 2025-10-12 17:48:25,019 | INFO     | sum of deviations: -114589537785.58798
[2025-10-12 13:49:07] 2025-10-12 17:48:25,019 | INFO     | mean x: 1760277015.0729613
[2025-10-12 13:49:07] 2025-10-12 17:48:25,019 | INFO     | mean y: 2498655.7231759657
[2025-10-12 13:49:07] 2025-10-12 17:48:25,019 | INFO     | -- intersect: 6430816745.585381
[2025-10-12 13:49:07] 2025-10-12 17:48:25,020 | INFO     | intersect: 6430816745.585381
[2025-10-12 13:49:07] 2025-10-12 17:48:25,020 | INFO     | chi2: 2.3981480810459095
[2025-10-12 13:49:07] 2025-10-12 17:48:25,021 | INFO     | current chi2=2.3981480810459095 (change=1.8258362410574485 %)
[2025-10-12 13:49:07] 2025-10-12 17:48:25,021 | INFO     | left removable region: 20
[2025-10-12 13:49:07] 2025-10-12 17:48:25,021 | INFO     | sum of square deviations: 27324121156.997837
[2025-10-12 13:49:07] 2025-10-12 17:48:25,053 | INFO     | sum of deviations: 15603270829.494375
[2025-10-12 13:49:07] 2025-10-12 17:48:25,060 | INFO     | mean x: 1760276984.5977528
[2025-10-12 13:49:07] 2025-10-12 17:48:25,060 | INFO     | mean y: 2506091.4943820224
[2025-10-12 13:49:07] 2025-10-12 17:48:25,060 | INFO     | -- intersect: -1002689221.7525089
[2025-10-12 13:49:07] 2025-10-12 17:48:25,061 | INFO     | intersect: -1002689221.7525089
[2025-10-12 13:49:07] 2025-10-12 17:48:25,061 | INFO     | chi2: 0.006544843683435696
[2025-10-12 13:49:07] 2025-10-12 17:48:25,062 | INFO     | -- intersect: -1002689221.7525089
[2025-10-12 13:49:07] 2025-10-12 17:48:25,062 | INFO     | current memory leak: 0.57 B/s (using 445 data points, chi2=0.01)
[2025-10-12 13:49:07] 2025-10-12 17:48:25,062 | INFO     | could have reported an average CPU frequency of 2598 MHz (19 samples)
[2025-10-12 13:49:07] 2025-10-12 17:48:25,063 | INFO     | ..............................
[2025-10-12 13:49:07] 2025-10-12 17:48:25,063 | INFO     | . Timing measurements:
[2025-10-12 13:49:07] 2025-10-12 17:48:25,063 | INFO     | . get job = 1 s
[2025-10-12 13:49:07] 2025-10-12 17:48:25,063 | INFO     | . initial setup = 5 s
[2025-10-12 13:49:07] 2025-10-12 17:48:25,063 | INFO     | . payload setup = 46 s
[2025-10-12 13:49:07] 2025-10-12 17:48:25,063 | INFO     | . stage-in = 1 s
[2025-10-12 13:49:07] 2025-10-12 17:48:25,063 | INFO     | . payload execution = 29037 s
[2025-10-12 13:49:07] 2025-10-12 17:48:25,064 | INFO     | . stage-out = 9 s
[2025-10-12 13:49:07] 2025-10-12 17:48:25,064 | INFO     | . log creation = 2 s
[2025-10-12 13:49:07] 2025-10-12 17:48:25,068 | INFO     | ..............................
[2025-10-12 13:49:07] 2025-10-12 17:48:25,268 | INFO     | time since job start (29251s) is within the limit (172800.0s)
[2025-10-12 13:49:07] 2025-10-12 17:48:25,402 | INFO     | 
[2025-10-12 13:49:07] 2025-10-12 17:48:25,402 | INFO     | job summary report
[2025-10-12 13:49:07] 2025-10-12 17:48:25,402 | INFO     | --------------------------------------------------
[2025-10-12 13:49:07] 2025-10-12 17:48:25,402 | INFO     | PanDA job id: 6839162144
[2025-10-12 13:49:07] 2025-10-12 17:48:25,403 | INFO     | task id: 46676269
[2025-10-12 13:49:07] 2025-10-12 17:48:25,403 | INFO     | errors: (none)
[2025-10-12 13:49:07] 2025-10-12 17:48:25,403 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 13:49:07] 2025-10-12 17:48:25,403 | INFO     | pilot state: finished 
[2025-10-12 13:49:07] 2025-10-12 17:48:25,403 | INFO     | transexitcode: 0
[2025-10-12 13:49:07] 2025-10-12 17:48:25,403 | INFO     | exeerrorcode: 0
[2025-10-12 13:49:07] 2025-10-12 17:48:25,403 | INFO     | exeerrordiag: 
[2025-10-12 13:49:07] 2025-10-12 17:48:25,403 | INFO     | exitcode: 0
[2025-10-12 13:49:07] 2025-10-12 17:48:25,403 | INFO     | exitmsg: OK
[2025-10-12 13:49:07] 2025-10-12 17:48:25,403 | INFO     | cpuconsumptiontime: 54183 s
[2025-10-12 13:49:07] 2025-10-12 17:48:25,403 | INFO     | nevents: 400
[2025-10-12 13:49:07] 2025-10-12 17:48:25,403 | INFO     | neventsw: 0
[2025-10-12 13:49:07] 2025-10-12 17:48:25,404 | INFO     | pid: 1378758
[2025-10-12 13:49:07] 2025-10-12 17:48:25,404 | INFO     | pgrp: 1378758
[2025-10-12 13:49:07] 2025-10-12 17:48:25,404 | INFO     | corecount: 8
[2025-10-12 13:49:07] 2025-10-12 17:48:25,404 | INFO     | event service: False
[2025-10-12 13:49:07] 2025-10-12 17:48:25,404 | INFO     | sizes: {0: 2348578, 1: 2348662, 2: 2348861, 13: 2348861, 24: 2348917, 35: 2349147, 36: 2349363, 46: 2349391, 29089: 2387022, 29091: 2387021, 29100: 2396075, 29103:
[2025-10-12 13:49:07] 2025-10-12 17:48:25,404 | INFO     | --------------------------------------------------
[2025-10-12 13:49:07] 2025-10-12 17:48:25,404 | INFO     | 
[2025-10-12 13:49:07] 2025-10-12 17:48:25,404 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 13:49:07] 2025-10-12 17:48:25,879 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 13:49:07] 2025-10-12 17:48:25,880 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 13:49:07] 2025-10-12 17:48:25,880 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 13:49:07] 2025-10-12 17:48:25,880 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 13:49:07] 2025-10-12 17:48:25,880 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 13:49:07] 2025-10-12 17:48:25,880 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 13:49:07] 2025-10-12 17:48:25,880 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 13:49:07] 2025-10-12 17:48:25,881 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 13:49:07] 2025-10-12 17:48:25,881 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 13:49:07] 2025-10-12 17:48:25,881 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 13:49:07] 2025-10-12 17:48:25,881 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 13:49:07] 2025-10-12 17:48:25,881 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 13:49:07] 2025-10-12 17:48:25,881 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 13:49:07] 2025-10-12 17:48:25,881 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 13:49:07] 2025-10-12 17:48:25,881 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 13:49:07] 2025-10-12 17:48:25,882 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 13:49:07] 2025-10-12 17:48:25,882 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 13:49:07] 2025-10-12 17:48:25,882 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 13:49:07] 2025-10-12 17:48:25,882 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 13:49:07] 2025-10-12 17:48:25,882 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 13:49:07] 2025-10-12 17:48:25,882 | INFO     | job 6839162144 has completed (purged errors)
[2025-10-12 13:49:07] 2025-10-12 17:48:25,883 | INFO     | overall cleanup function is called
[2025-10-12 13:49:07] 2025-10-12 17:48:26,938 | INFO     | --- collectZombieJob: --- 10, [1378758]
[2025-10-12 13:49:07] 2025-10-12 17:48:26,938 | INFO     | zombie collector waiting for pid 1378758
[2025-10-12 13:49:07] 2025-10-12 17:48:26,938 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 13:49:07] 2025-10-12 17:48:26,938 | INFO     | collected zombie processes
[2025-10-12 13:49:07] 2025-10-12 17:48:26,939 | INFO     | will attempt to kill all subprocesses of pid=1378758
[2025-10-12 13:49:07] 2025-10-12 17:48:28,624 | INFO     | process IDs to be killed: [1378758] (in reverse order)
[2025-10-12 13:49:07] 2025-10-12 17:48:29,363 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 13:49:07] 2025-10-12 17:48:29,363 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 13:49:07] 2025-10-12 17:48:29,413 | INFO     | did not find any defunct processes belonging to 1378758
[2025-10-12 13:49:07] 2025-10-12 17:48:29,495 | INFO     | did not find any defunct processes belonging to 1378758
[2025-10-12 13:49:07] 2025-10-12 17:48:29,497 | INFO     | ready for new job
[2025-10-12 13:49:07] 2025-10-12 17:48:29,497 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 13:49:07] 2025-10-12 17:48:29,550 | INFO     | ***************************************
[2025-10-12 13:49:07] 2025-10-12 17:48:29,551 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 13:49:07] 2025-10-12 17:48:29,551 | INFO     | ***************************************
[2025-10-12 13:49:07] 2025-10-12 17:48:29,551 | INFO     | 
[2025-10-12 13:49:07] 2025-10-12 17:48:29,553 | INFO     | architecture information:
[2025-10-12 13:49:07] 2025-10-12 17:48:29,612 | INFO     | executing command: cat /etc/os-release
[2025-10-12 13:49:07] 2025-10-12 17:48:29,836 | INFO     | cat /etc/os-release:
[2025-10-12 13:49:07] NAME="CentOS Linux"
[2025-10-12 13:49:07] VERSION="7 (Core)"
[2025-10-12 13:49:07] ID="centos"
[2025-10-12 13:49:07] ID_LIKE="rhel fedora"
[2025-10-12 13:49:07] VERSION_ID="7"
[2025-10-12 13:49:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 13:49:07] ANSI_COLOR="0;31"
[2025-10-12 13:49:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 13:49:07] HOME_URL="https://www.centos.org/"
[2025-10-12 13:49:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 13:49:07] 
[2025-10-12 13:49:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 13:49:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 13:49:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 13:49:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 13:49:07] 
[2025-10-12 13:49:07] 2025-10-12 17:48:29,837 | INFO     | ***************************************
[2025-10-12 13:49:07] 2025-10-12 17:48:30,343 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 13:49:07] 2025-10-12 17:48:30,531 | INFO     | sufficient remaining disk space (53070528512 B)
[2025-10-12 13:49:07] 2025-10-12 17:48:30,532 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 13:49:07] 2025-10-12 17:48:30,532 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 13:49:07] 2025-10-12 17:48:30,532 | INFO     | update_server=False
[2025-10-12 13:49:07] 2025-10-12 17:48:30,532 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 13:49:07] 2025-10-12 17:48:30,533 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 13:49:07] 2025-10-12 17:48:30,540 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 13:49:07] 2025-10-12 17:48:30,703 | INFO     | all job control threads have been joined
[2025-10-12 13:49:07] 2025-10-12 17:48:30,713 | INFO     | all data control threads have been joined
[2025-10-12 13:49:07] 2025-10-12 17:48:30,751 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 13:49:07] 2025-10-12 17:48:31,114 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 13:49:07] 2025-10-12 17:48:31,114 | INFO     | aborting loop
[2025-10-12 13:49:07] 2025-10-12 17:48:31,538 | INFO     | [job] retrieve thread has finished
[2025-10-12 13:49:07] 2025-10-12 17:48:31,546 | INFO     | [job] queue monitor thread has finished
[2025-10-12 13:49:07] 2025-10-12 17:48:31,559 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 13:49:07] 2025-10-12 17:48:31,617 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 13:49:07] 2025-10-12 17:48:31,754 | INFO     | [job] control thread has finished
[2025-10-12 13:49:07] 2025-10-12 17:48:31,755 | INFO     | [data] control thread has finished
[2025-10-12 13:49:07] 2025-10-12 17:48:31,755 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 13:49:07] 2025-10-12 17:48:31,998 | INFO     | all payload control threads have been joined
[2025-10-12 13:49:07] 2025-10-12 17:48:32,078 | INFO     | [job] validate thread has finished
[2025-10-12 13:49:07] 2025-10-12 17:48:32,119 | INFO     | [job] job monitor thread has finished
[2025-10-12 13:49:07] 2025-10-12 17:48:32,400 | INFO     | [payload] validate_post thread has finished
[2025-10-12 13:49:07] 2025-10-12 17:48:32,567 | INFO     | [data] copytool_out thread has finished
[2025-10-12 13:49:07] 2025-10-12 17:48:32,763 | INFO     | [data] copytool_in thread has finished
[2025-10-12 13:49:07] 2025-10-12 17:48:32,861 | INFO     | [payload] failed_post thread has finished
[2025-10-12 13:49:07] 2025-10-12 17:48:32,954 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 13:49:07] 2025-10-12 17:48:33,006 | INFO     | [payload] control thread has finished
[2025-10-12 13:49:07] 2025-10-12 17:48:34,767 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 13:49:07] 2025-10-12 17:48:48,910 | INFO     | [monitor] cgroup control has ended
[2025-10-12 13:49:07] 2025-10-12 17:48:49,924 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140683427784512)>', '<ExcThread(monitor, started 140683155314432)>']
[2025-10-12 13:49:07] 2025-10-12 17:48:54,986 | INFO     | all workflow threads have been joined
[2025-10-12 13:49:07] 2025-10-12 17:48:54,986 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 13:49:07] 2025-10-12 17:48:54,987 | INFO     | traces error code: 0
[2025-10-12 13:49:07] 2025-10-12 17:48:54,987 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 13:49:07] 2025-10-12 17:49:04,895 | INFO     | PID=1371111 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 13:49:07] 2025-10-12 17:49:04,896 | INFO     | .. there are 14 such processes running
[2025-10-12 13:49:07] 2025-10-12 17:49:04,897 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 13:49:07] 2025-10-12 17:49:04,897 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 13:49:07] 2025-10-12 17:49:04,897 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 13:49:07] 2025-10-12 17:49:04,897 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 13:49:07] 2025-10-12 17:49:04,897 | INFO     | [monitor] control thread has ended
[2025-10-12 13:49:07] 2025-10-12 17:49:05,510 [wrapper] ==== pilot stdout END ====
[2025-10-12 13:49:07] 2025-10-12 17:49:05,641 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 13:49:07] 2025-10-12 17:49:05,708 [wrapper] pilotpid: 1371111
[2025-10-12 13:49:07] 2025-10-12 17:49:05,831 [wrapper] Pilot exit status: 0
[2025-10-12 13:49:07] 2025-10-12 17:49:05,998 [wrapper] pandaids: 6839162144
[2025-10-12 13:49:07] 2025-10-12 17:49:06,342 [wrapper] cleanup supervisor_pilot 2157468 1371112
[2025-10-12 13:49:07] 2025-10-12 17:49:06,345 [wrapper] Test setup, not cleaning
[2025-10-12 13:49:07] 2025-10-12 17:49:06,349 [wrapper] apfmon messages muted
[2025-10-12 13:49:07] 2025-10-12 17:49:06,353 [wrapper] ==== wrapper stdout END ====
[2025-10-12 13:49:07] 2025-10-12 17:49:06,356 [wrapper] ==== wrapper stderr END ====
[2025-10-12 13:49:07]  *** Error codes and diagnostics ***
[2025-10-12 13:49:07]     "exeErrorCode": 0,
[2025-10-12 13:49:07]     "exeErrorDiag": "",
[2025-10-12 13:49:07]     "pilotErrorCode": 0,
[2025-10-12 13:49:07]     "pilotErrorDiag": "",
[2025-10-12 13:49:07]  *** Listing of results directory ***
[2025-10-12 13:49:07] total 416072
[2025-10-12 13:49:07] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 19:08 queuedata.json
[2025-10-12 13:49:07] -rwx------. 1 boincer umatlas     36292 Oct 11 19:09 runpilot2-wrapper.sh
[2025-10-12 13:49:07] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 19:09 pilot3.tar.gz
[2025-10-12 13:49:07] -rw-r--r--. 1 boincer umatlas       100 Oct 12 05:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 13:49:07] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 05:39 run_atlas
[2025-10-12 13:49:07] -rw-r--r--. 1 boincer umatlas       105 Oct 12 05:39 job.xml
[2025-10-12 13:49:07] -rw-r--r--. 2 boincer umatlas 219858373 Oct 12 05:39 EVNT.46676267._001309.pool.root.1
[2025-10-12 13:49:07] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 05:39 start_atlas.sh
[2025-10-12 13:49:07] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 05:39 shared
[2025-10-12 13:49:07] -rw-r--r--. 2 boincer umatlas    569681 Oct 12 05:39 input.tar.gz
[2025-10-12 13:49:07] -rw-r--r--. 1 boincer umatlas         0 Oct 12 05:39 boinc_lockfile
[2025-10-12 13:49:07] -rw-r--r--. 1 boincer umatlas      2549 Oct 12 05:39 pandaJob.out
[2025-10-12 13:49:07] -rw-------. 1 boincer umatlas    975536 Oct 12 05:40 agis_schedconf.cvmfs.json
[2025-10-12 13:49:07] drwx------. 5 boincer umatlas      4096 Oct 12 05:40 pilot3
[2025-10-12 13:49:07] -rw-------. 1 boincer umatlas 193816069 Oct 12 13:44 HITS.46676269._066751.pool.root.1
[2025-10-12 13:49:07] -rw-r--r--. 1 boincer umatlas       531 Oct 12 13:44 boinc_task_state.xml
[2025-10-12 13:49:07] -rw-------. 1 boincer umatlas      1044 Oct 12 13:47 memory_monitor_summary.json
[2025-10-12 13:49:07] -rw-------. 1 boincer umatlas   1560580 Oct 12 13:47 agis_ddmendpoints.agis.ALL.json
[2025-10-12 13:49:07] -rw-------. 1 boincer umatlas    631160 Oct 12 13:47 log.46676269._066751.job.log.tgz.1
[2025-10-12 13:49:07] -rw-------. 1 boincer umatlas      7829 Oct 12 13:48 heartbeat.json
[2025-10-12 13:49:07] -rw-------. 1 boincer umatlas        95 Oct 12 13:49 pilot_heartbeat.json
[2025-10-12 13:49:07] -rw-------. 1 boincer umatlas       823 Oct 12 13:49 pilotlog.txt
[2025-10-12 13:49:07] -rw-------. 1 boincer umatlas   3617346 Oct 12 13:49 log.46676269._066751.job.log.1
[2025-10-12 13:49:07] -rw-------. 1 boincer umatlas       357 Oct 12 13:49 output.list
[2025-10-12 13:49:07] -rw-r--r--. 1 boincer umatlas      6660 Oct 12 13:49 init_data.xml
[2025-10-12 13:49:07] -rw-r--r--. 1 boincer umatlas        28 Oct 12 13:49 wrapper_checkpoint.txt
[2025-10-12 13:49:07] -rw-r--r--. 1 boincer umatlas       620 Oct 12 13:49 runtime_log
[2025-10-12 13:49:07] -rw-------. 1 boincer umatlas   4270080 Oct 12 13:49 result.tar.gz
[2025-10-12 13:49:07] -rw-r--r--. 1 boincer umatlas      8699 Oct 12 13:49 runtime_log.err
[2025-10-12 13:49:07] -rw-------. 1 boincer umatlas       659 Oct 12 13:49 CiCLDmOtxR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmSvhNDmFgVb2m.diag
[2025-10-12 13:49:07] -rw-r--r--. 1 boincer umatlas      2143 Oct 12 13:49 stderr.txt
[2025-10-12 13:49:07] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 13:49 boinc_mmap_file
[2025-10-12 13:49:07] HITS file was successfully produced:
[2025-10-12 13:49:07] -rw-------. 1 boincer umatlas 193816069 Oct 12 13:44 shared/HITS.pool.root.1
[2025-10-12 13:49:07]  *** Contents of shared directory: ***
[2025-10-12 13:49:07] total 408736
[2025-10-12 13:49:07] -rw-r--r--. 2 boincer umatlas 219858373 Oct 12 05:39 ATLAS.root_0
[2025-10-12 13:49:07] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 05:39 start_atlas.sh
[2025-10-12 13:49:07] -rw-r--r--. 2 boincer umatlas    569681 Oct 12 05:39 input.tar.gz
[2025-10-12 13:49:07] -rw-------. 1 boincer umatlas 193816069 Oct 12 13:44 HITS.pool.root.1
[2025-10-12 13:49:07] -rw-------. 1 boincer umatlas   4270080 Oct 12 13:49 result.tar.gz
13:49:09 (1365679): run_atlas exited; CPU time 54758.001193
13:49:09 (1365679): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN