Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:08:09 (2795453): wrapper (7.7.26015): starting
00:08:09 (2795453): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 00:08:09] Arguments: --nthreads 12
[2025-10-12 00:08:09] Threads: 12
[2025-10-12 00:08:09] Checking for CVMFS
[2025-10-12 00:08:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 00:08:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 00:08:11] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 00:08:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 00:08:12] 2.13.2.0 2126255 6580 153412 151607 0 104 35444968 40960000 26617 16776704 0 14604574 99.739 12127346 34809 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 00:08:12] CVMFS is ok
[2025-10-12 00:08:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 00:08:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 00:08:12] Further information can be found at the LHC@home message board.
[2025-10-12 00:08:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 00:08:12] Checking for apptainer binary...
[2025-10-12 00:08:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 00:08:12] Running /usr/bin/apptainer --version
[2025-10-12 00:08:12] apptainer version 1.4.3-1.el9
[2025-10-12 00:08:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 00:08:13] c6-8-12-3.aglt2.org
[2025-10-12 00:08:13] apptainer works
[2025-10-12 00:08:13] Set ATHENA_PROC_NUMBER=12
[2025-10-12 00:08:13] Set ATHENA_CORE_NUMBER=12
[2025-10-12 00:08:13] Starting ATLAS job with PandaID=6839083772
[2025-10-12 00:08:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 09:56:17]  *** The last 200 lines of the pilot log: ***
[2025-10-12 09:56:17] 2025-10-12 13:55:32,118 | INFO     | intersect: -17115756477.521069
[2025-10-12 09:56:17] 2025-10-12 13:55:32,119 | INFO     | chi2: 6.579842018274381
[2025-10-12 09:56:17] 2025-10-12 13:55:32,120 | INFO     | sum of square deviations: 56820218411.89954
[2025-10-12 09:56:17] 2025-10-12 13:55:32,128 | INFO     | sum of deviations: 595860625832.9626
[2025-10-12 09:56:17] 2025-10-12 13:55:32,129 | INFO     | mean x: 1760259715.294014
[2025-10-12 09:56:17] 2025-10-12 13:55:32,129 | INFO     | mean y: 2285679.3714788733
[2025-10-12 09:56:17] 2025-10-12 13:55:32,129 | INFO     | -- intersect: -18457155077.793663
[2025-10-12 09:56:17] 2025-10-12 13:55:32,129 | INFO     | intersect: -18457155077.793663
[2025-10-12 09:56:17] 2025-10-12 13:55:32,130 | INFO     | chi2: 5.908963151286923
[2025-10-12 09:56:17] 2025-10-12 13:55:32,130 | INFO     | current chi2=5.908963151286923 (change=10.195972260796035 %)
[2025-10-12 09:56:17] 2025-10-12 13:55:32,130 | INFO     | right removable region: 567
[2025-10-12 09:56:17] 2025-10-12 13:55:32,131 | INFO     | sum of square deviations: 56819943301.89954
[2025-10-12 09:56:17] 2025-10-12 13:55:32,140 | INFO     | sum of deviations: 408554284028.9247
[2025-10-12 09:56:17] 2025-10-12 13:55:32,140 | INFO     | mean x: 1760260020.294014
[2025-10-12 09:56:17] 2025-10-12 13:55:32,141 | INFO     | mean y: 2298801.7130281692
[2025-10-12 09:56:17] 2025-10-12 13:55:32,141 | INFO     | -- intersect: -12654556001.447592
[2025-10-12 09:56:17] 2025-10-12 13:55:32,141 | INFO     | intersect: -12654556001.447592
[2025-10-12 09:56:17] 2025-10-12 13:55:32,142 | INFO     | chi2: 3.265036407604832
[2025-10-12 09:56:17] 2025-10-12 13:55:32,142 | INFO     | current chi2=3.265036407604832 (change=50.37819451383857 %)
[2025-10-12 09:56:17] 2025-10-12 13:55:32,143 | INFO     | sum of square deviations: 55332373203.71937
[2025-10-12 09:56:17] 2025-10-12 13:55:32,152 | INFO     | sum of deviations: 316267883758.5257
[2025-10-12 09:56:17] 2025-10-12 13:55:32,152 | INFO     | mean x: 1760260172.8010657
[2025-10-12 09:56:17] 2025-10-12 13:55:32,153 | INFO     | mean y: 2308250.7904085256
[2025-10-12 09:56:17] 2025-10-12 13:55:32,153 | INFO     | -- intersect: -10058958372.75626
[2025-10-12 09:56:17] 2025-10-12 13:55:32,153 | INFO     | intersect: -10058958372.75626
[2025-10-12 09:56:17] 2025-10-12 13:55:32,154 | INFO     | chi2: 2.1708890823771885
[2025-10-12 09:56:17] 2025-10-12 13:55:32,154 | INFO     | current chi2=2.1708890823771885 (change=33.51102985189341 %)
[2025-10-12 09:56:17] 2025-10-12 13:55:32,155 | INFO     | sum of square deviations: 53871126773.41947
[2025-10-12 09:56:17] 2025-10-12 13:55:32,163 | INFO     | sum of deviations: 243153864735.74185
[2025-10-12 09:56:17] 2025-10-12 13:55:32,164 | INFO     | mean x: 1760260325.3010752
[2025-10-12 09:56:17] 2025-10-12 13:55:32,164 | INFO     | mean y: 2315879.0967741935
[2025-10-12 09:56:17] 2025-10-12 13:55:32,164 | INFO     | -- intersect: -7942832601.612875
[2025-10-12 09:56:17] 2025-10-12 13:55:32,164 | INFO     | intersect: -7942832601.612875
[2025-10-12 09:56:17] 2025-10-12 13:55:32,165 | INFO     | chi2: 1.558949352952097
[2025-10-12 09:56:17] 2025-10-12 13:55:32,165 | INFO     | current chi2=1.558949352952097 (change=28.188438294369195 %)
[2025-10-12 09:56:17] 2025-10-12 13:55:32,166 | INFO     | sum of square deviations: 52435732690.29656
[2025-10-12 09:56:17] 2025-10-12 13:55:32,180 | INFO     | sum of deviations: 186178798430.64563
[2025-10-12 09:56:17] 2025-10-12 13:55:32,180 | INFO     | mean x: 1760260477.80651
[2025-10-12 09:56:17] 2025-10-12 13:55:32,181 | INFO     | mean y: 2321927.9873417723
[2025-10-12 09:56:17] 2025-10-12 13:55:32,181 | INFO     | -- intersect: -6247675237.468813
[2025-10-12 09:56:17] 2025-10-12 13:55:32,181 | INFO     | intersect: -6247675237.468813
[2025-10-12 09:56:17] 2025-10-12 13:55:32,182 | INFO     | chi2: 1.1845566195485842
[2025-10-12 09:56:17] 2025-10-12 13:55:32,182 | INFO     | current chi2=1.1845566195485842 (change=24.015708572863247 %)
[2025-10-12 09:56:17] 2025-10-12 13:55:32,182 | INFO     | left removable region: 40
[2025-10-12 09:56:17] 2025-10-12 13:55:32,183 | INFO     | sum of square deviations: 45382045006.678955
[2025-10-12 09:56:17] 2025-10-12 13:55:32,194 | INFO     | sum of deviations: 140839436006.20126
[2025-10-12 09:56:17] 2025-10-12 13:55:32,194 | INFO     | mean x: 1760260904.7988615
[2025-10-12 09:56:17] 2025-10-12 13:55:32,194 | INFO     | mean y: 2333468.0018975334
[2025-10-12 09:56:17] 2025-10-12 13:55:32,194 | INFO     | -- intersect: -5460491158.32667
[2025-10-12 09:56:17] 2025-10-12 13:55:32,195 | INFO     | intersect: -5460491158.32667
[2025-10-12 09:56:17] 2025-10-12 13:55:32,196 | INFO     | chi2: 0.2187963969547906
[2025-10-12 09:56:17] 2025-10-12 13:55:32,196 | INFO     | -- intersect: -5460491158.32667
[2025-10-12 09:56:17] 2025-10-12 13:55:32,196 | INFO     | current memory leak: 3.10 B/s (using 527 data points, chi2=0.22)
[2025-10-12 09:56:17] 2025-10-12 13:55:32,197 | INFO     | could have reported an average CPU frequency of 2823 MHz (22 samples)
[2025-10-12 09:56:17] 2025-10-12 13:55:32,198 | INFO     | ..............................
[2025-10-12 09:56:17] 2025-10-12 13:55:32,198 | INFO     | . Timing measurements:
[2025-10-12 09:56:17] 2025-10-12 13:55:32,198 | INFO     | . get job = 0 s
[2025-10-12 09:56:17] 2025-10-12 13:55:32,198 | INFO     | . initial setup = 10 s
[2025-10-12 09:56:17] 2025-10-12 13:55:32,198 | INFO     | . payload setup = 60 s
[2025-10-12 09:56:17] 2025-10-12 13:55:32,199 | INFO     | . stage-in = 1 s
[2025-10-12 09:56:17] 2025-10-12 13:55:32,199 | INFO     | . payload execution = 34939 s
[2025-10-12 09:56:17] 2025-10-12 13:55:32,199 | INFO     | . stage-out = 2 s
[2025-10-12 09:56:17] 2025-10-12 13:55:32,199 | INFO     | . log creation = 0 s
[2025-10-12 09:56:17] 2025-10-12 13:55:32,199 | INFO     | ..............................
[2025-10-12 09:56:17] 2025-10-12 13:55:32,263 | INFO     | time since job start (35129s) is within the limit (172800.0s)
[2025-10-12 09:56:17] 2025-10-12 13:55:32,385 | INFO     | 
[2025-10-12 09:56:17] 2025-10-12 13:55:32,386 | INFO     | job summary report
[2025-10-12 09:56:17] 2025-10-12 13:55:32,386 | INFO     | --------------------------------------------------
[2025-10-12 09:56:17] 2025-10-12 13:55:32,386 | INFO     | PanDA job id: 6839083772
[2025-10-12 09:56:17] 2025-10-12 13:55:32,386 | INFO     | task id: 46676269
[2025-10-12 09:56:17] 2025-10-12 13:55:32,386 | INFO     | errors: (none)
[2025-10-12 09:56:17] 2025-10-12 13:55:32,386 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 09:56:17] 2025-10-12 13:55:32,386 | INFO     | pilot state: finished 
[2025-10-12 09:56:17] 2025-10-12 13:55:32,387 | INFO     | transexitcode: 0
[2025-10-12 09:56:17] 2025-10-12 13:55:32,387 | INFO     | exeerrorcode: 0
[2025-10-12 09:56:17] 2025-10-12 13:55:32,387 | INFO     | exeerrordiag: 
[2025-10-12 09:56:17] 2025-10-12 13:55:32,387 | INFO     | exitcode: 0
[2025-10-12 09:56:17] 2025-10-12 13:55:32,387 | INFO     | exitmsg: OK
[2025-10-12 09:56:17] 2025-10-12 13:55:32,387 | INFO     | cpuconsumptiontime: 47659 s
[2025-10-12 09:56:17] 2025-10-12 13:55:32,387 | INFO     | nevents: 400
[2025-10-12 09:56:17] 2025-10-12 13:55:32,387 | INFO     | neventsw: 0
[2025-10-12 09:56:17] 2025-10-12 13:55:32,387 | INFO     | pid: 2826748
[2025-10-12 09:56:17] 2025-10-12 13:55:32,387 | INFO     | pgrp: 2826748
[2025-10-12 09:56:17] 2025-10-12 13:55:32,387 | INFO     | corecount: 12
[2025-10-12 09:56:17] 2025-10-12 13:55:32,387 | INFO     | event service: False
[2025-10-12 09:56:17] 2025-10-12 13:55:32,388 | INFO     | sizes: {0: 2348634, 1: 2348833, 2: 2348833, 13: 2348861, 26: 2348917, 37: 2348945, 49: 2349157, 52: 2349391, 61: 2349419, 35004: 2388915, 35006: 2397913, 35008: 23
[2025-10-12 09:56:17] 2025-10-12 13:55:32,388 | INFO     | --------------------------------------------------
[2025-10-12 09:56:17] 2025-10-12 13:55:32,388 | INFO     | 
[2025-10-12 09:56:17] 2025-10-12 13:55:32,388 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-12 09:56:17] 2025-10-12 13:55:32,418 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 09:56:17] 2025-10-12 13:55:32,419 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 09:56:17] 2025-10-12 13:55:32,419 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 09:56:17] 2025-10-12 13:55:32,419 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 09:56:17] 2025-10-12 13:55:32,419 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 09:56:17] 2025-10-12 13:55:32,419 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 09:56:17] 2025-10-12 13:55:32,419 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 09:56:17] 2025-10-12 13:55:32,419 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 09:56:17] 2025-10-12 13:55:32,419 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 09:56:17] 2025-10-12 13:55:32,419 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 09:56:17] 2025-10-12 13:55:32,419 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 09:56:17] 2025-10-12 13:55:32,419 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 09:56:17] 2025-10-12 13:55:32,420 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 09:56:17] 2025-10-12 13:55:32,420 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 09:56:17] 2025-10-12 13:55:32,420 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 09:56:17] 2025-10-12 13:55:32,420 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 09:56:17] 2025-10-12 13:55:32,420 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 09:56:17] 2025-10-12 13:55:32,420 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 09:56:17] 2025-10-12 13:55:32,420 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 09:56:17] 2025-10-12 13:55:32,420 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 09:56:17] 2025-10-12 13:55:32,420 | INFO     | job 6839083772 has completed (purged errors)
[2025-10-12 09:56:17] 2025-10-12 13:55:32,420 | INFO     | overall cleanup function is called
[2025-10-12 09:56:17] 2025-10-12 13:55:33,429 | INFO     | --- collectZombieJob: --- 10, [2826748]
[2025-10-12 09:56:17] 2025-10-12 13:55:33,429 | INFO     | zombie collector waiting for pid 2826748
[2025-10-12 09:56:17] 2025-10-12 13:55:33,429 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 09:56:17] 2025-10-12 13:55:33,429 | INFO     | collected zombie processes
[2025-10-12 09:56:17] 2025-10-12 13:55:33,429 | INFO     | will attempt to kill all subprocesses of pid=2826748
[2025-10-12 09:56:17] 2025-10-12 13:55:33,813 | INFO     | process IDs to be killed: [2826748] (in reverse order)
[2025-10-12 09:56:17] 2025-10-12 13:55:33,926 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 09:56:17] 2025-10-12 13:55:33,926 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 09:56:17] 2025-10-12 13:55:33,943 | INFO     | did not find any defunct processes belonging to 2826748
[2025-10-12 09:56:17] 2025-10-12 13:55:33,959 | INFO     | did not find any defunct processes belonging to 2826748
[2025-10-12 09:56:17] 2025-10-12 13:55:33,960 | INFO     | ready for new job
[2025-10-12 09:56:17] 2025-10-12 13:55:33,960 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 09:56:17] 2025-10-12 13:55:33,964 | INFO     | ***************************************
[2025-10-12 09:56:17] 2025-10-12 13:55:33,964 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 09:56:17] 2025-10-12 13:55:33,964 | INFO     | ***************************************
[2025-10-12 09:56:17] 2025-10-12 13:55:33,964 | INFO     | 
[2025-10-12 09:56:17] 2025-10-12 13:55:33,968 | INFO     | architecture information:
[2025-10-12 09:56:17] 2025-10-12 13:55:33,969 | INFO     | executing command: cat /etc/os-release
[2025-10-12 09:56:17] 2025-10-12 13:55:34,065 | INFO     | cat /etc/os-release:
[2025-10-12 09:56:17] NAME="CentOS Linux"
[2025-10-12 09:56:17] VERSION="7 (Core)"
[2025-10-12 09:56:17] ID="centos"
[2025-10-12 09:56:17] ID_LIKE="rhel fedora"
[2025-10-12 09:56:17] VERSION_ID="7"
[2025-10-12 09:56:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 09:56:17] ANSI_COLOR="0;31"
[2025-10-12 09:56:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 09:56:17] HOME_URL="https://www.centos.org/"
[2025-10-12 09:56:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 09:56:17] 
[2025-10-12 09:56:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 09:56:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 09:56:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 09:56:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 09:56:17] 
[2025-10-12 09:56:17] 2025-10-12 13:55:34,066 | INFO     | ***************************************
[2025-10-12 09:56:17] 2025-10-12 13:55:34,569 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-12 09:56:17] 2025-10-12 13:55:34,599 | INFO     | sufficient remaining disk space (54976839680 B)
[2025-10-12 09:56:17] 2025-10-12 13:55:34,600 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 09:56:17] 2025-10-12 13:55:34,600 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 09:56:17] 2025-10-12 13:55:34,600 | INFO     | update_server=False
[2025-10-12 09:56:17] 2025-10-12 13:55:34,600 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 09:56:17] 2025-10-12 13:55:34,601 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 09:56:17] 2025-10-12 13:55:34,803 | INFO     | all data control threads have been joined
[2025-10-12 09:56:17] 2025-10-12 13:55:34,956 | INFO     | all job control threads have been joined
[2025-10-12 09:56:17] 2025-10-12 13:55:35,161 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 09:56:17] 2025-10-12 13:55:35,161 | INFO     | aborting loop
[2025-10-12 09:56:17] 2025-10-12 13:55:35,252 | INFO     | all payload control threads have been joined
[2025-10-12 09:56:17] 2025-10-12 13:55:35,605 | INFO     | [job] retrieve thread has finished
[2025-10-12 09:56:17] 2025-10-12 13:55:35,723 | INFO     | [data] copytool_in thread has finished
[2025-10-12 09:56:17] 2025-10-12 13:55:35,785 | INFO     | [payload] validate_post thread has finished
[2025-10-12 09:56:17] 2025-10-12 13:55:35,809 | INFO     | [data] control thread has finished
[2025-10-12 09:56:17] 2025-10-12 13:55:35,963 | INFO     | [job] control thread has finished
[2025-10-12 09:56:17] 2025-10-12 13:55:36,000 | INFO     | [job] validate thread has finished
[2025-10-12 09:56:17] 2025-10-12 13:55:36,011 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 09:56:17] 2025-10-12 13:55:36,164 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 09:56:17] 2025-10-12 13:55:36,166 | INFO     | [job] job monitor thread has finished
[2025-10-12 09:56:17] 2025-10-12 13:55:36,188 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 09:56:17] 2025-10-12 13:55:36,258 | INFO     | [payload] control thread has finished
[2025-10-12 09:56:17] 2025-10-12 13:55:36,610 | INFO     | [data] copytool_out thread has finished
[2025-10-12 09:56:17] 2025-10-12 13:55:36,667 | INFO     | [payload] failed_post thread has finished
[2025-10-12 09:56:17] 2025-10-12 13:55:37,102 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 09:56:17] 2025-10-12 13:55:37,357 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 09:56:17] 2025-10-12 13:55:37,676 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 09:56:17] 2025-10-12 13:55:38,362 | INFO     | [job] queue monitor thread has finished
[2025-10-12 09:56:17] 2025-10-12 13:55:41,689 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 09:56:17] 2025-10-12 13:56:05,830 | INFO     | PID=2804709 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 09:56:17] 2025-10-12 13:56:05,832 | INFO     | .. there are 31 such processes running
[2025-10-12 09:56:17] 2025-10-12 13:56:05,833 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 09:56:17] 2025-10-12 13:56:05,833 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 09:56:17] 2025-10-12 13:56:05,833 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 09:56:17] 2025-10-12 13:56:11,001 | INFO     | [monitor] cgroup control has ended
[2025-10-12 09:56:17] 2025-10-12 13:56:11,620 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140336888072000)>', '<ExcThread(monitor, started 140336529643264)>']
[2025-10-12 09:56:17] 2025-10-12 13:56:11,867 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 09:56:17] 2025-10-12 13:56:11,867 | INFO     | [monitor] control thread has ended
[2025-10-12 09:56:17] 2025-10-12 13:56:16,645 | INFO     | all workflow threads have been joined
[2025-10-12 09:56:17] 2025-10-12 13:56:16,645 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 09:56:17] 2025-10-12 13:56:16,645 | INFO     | traces error code: 0
[2025-10-12 09:56:17] 2025-10-12 13:56:16,645 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 09:56:17] 2025-10-12 13:56:16,894 [wrapper] ==== pilot stdout END ====
[2025-10-12 09:56:17] 2025-10-12 13:56:16,899 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 09:56:17] 2025-10-12 13:56:16,903 [wrapper] pilotpid: 2804709
[2025-10-12 09:56:17] 2025-10-12 13:56:16,906 [wrapper] Pilot exit status: 0
[2025-10-12 09:56:17] 2025-10-12 13:56:16,925 [wrapper] pandaids: 6839083772
[2025-10-12 09:56:17] 2025-10-12 13:56:17,034 [wrapper] cleanup supervisor_pilot  328180 2804710
[2025-10-12 09:56:17] 2025-10-12 13:56:17,049 [wrapper] Test setup, not cleaning
[2025-10-12 09:56:17] 2025-10-12 13:56:17,055 [wrapper] apfmon messages muted
[2025-10-12 09:56:17] 2025-10-12 13:56:17,059 [wrapper] ==== wrapper stdout END ====
[2025-10-12 09:56:17] 2025-10-12 13:56:17,066 [wrapper] ==== wrapper stderr END ====
[2025-10-12 09:56:17]  *** Error codes and diagnostics ***
[2025-10-12 09:56:17]     "exeErrorCode": 0,
[2025-10-12 09:56:17]     "exeErrorDiag": "",
[2025-10-12 09:56:17]     "pilotErrorCode": 0,
[2025-10-12 09:56:17]     "pilotErrorDiag": "",
[2025-10-12 09:56:17]  *** Listing of results directory ***
[2025-10-12 09:56:17] total 423008
[2025-10-12 09:56:17] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 18:51 pilot3.tar.gz
[2025-10-12 09:56:17] -rwx------. 1 boincer umatlas     36292 Oct 11 18:59 runpilot2-wrapper.sh
[2025-10-12 09:56:17] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 18:59 queuedata.json
[2025-10-12 09:56:17] -rw-r--r--. 1 boincer umatlas       100 Oct 12 00:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 09:56:17] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 00:08 run_atlas
[2025-10-12 09:56:17] -rw-r--r--. 1 boincer umatlas       105 Oct 12 00:08 job.xml
[2025-10-12 09:56:17] -rw-r--r--. 2 boincer umatlas 220768145 Oct 12 00:08 EVNT.46676267._001025.pool.root.1
[2025-10-12 09:56:17] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:08 start_atlas.sh
[2025-10-12 09:56:17] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 00:08 shared
[2025-10-12 09:56:17] -rw-r--r--. 2 boincer umatlas    569681 Oct 12 00:08 input.tar.gz
[2025-10-12 09:56:17] -rw-r--r--. 1 boincer umatlas         0 Oct 12 00:08 boinc_lockfile
[2025-10-12 09:56:17] -rw-r--r--. 1 boincer umatlas      2549 Oct 12 00:08 pandaJob.out
[2025-10-12 09:56:17] -rw-------. 1 boincer umatlas    975512 Oct 12 00:09 agis_schedconf.cvmfs.json
[2025-10-12 09:56:17] drwx------. 5 boincer umatlas      4096 Oct 12 00:10 pilot3
[2025-10-12 09:56:17] -rw-r--r--. 1 boincer umatlas      6843 Oct 12 09:54 init_data.xml
[2025-10-12 09:56:17] -rw-------. 1 boincer umatlas 199250549 Oct 12 09:54 HITS.46676269._066536.pool.root.1
[2025-10-12 09:56:17] -rw-r--r--. 1 boincer umatlas       531 Oct 12 09:54 boinc_task_state.xml
[2025-10-12 09:56:17] -rw-------. 1 boincer umatlas      1042 Oct 12 09:55 memory_monitor_summary.json
[2025-10-12 09:56:17] -rw-------. 1 boincer umatlas   1560580 Oct 12 09:55 agis_ddmendpoints.agis.ALL.json
[2025-10-12 09:56:17] -rw-------. 1 boincer umatlas    749007 Oct 12 09:55 log.46676269._066536.job.log.tgz.1
[2025-10-12 09:56:17] -rw-------. 1 boincer umatlas        95 Oct 12 09:55 pilot_heartbeat.json
[2025-10-12 09:56:17] -rw-------. 1 boincer umatlas      7830 Oct 12 09:55 heartbeat.json
[2025-10-12 09:56:17] -rw-------. 1 boincer umatlas      4824 Oct 12 09:56 pilotlog.txt
[2025-10-12 09:56:17] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 09:56 boinc_mmap_file
[2025-10-12 09:56:17] -rw-r--r--. 1 boincer umatlas        28 Oct 12 09:56 wrapper_checkpoint.txt
[2025-10-12 09:56:17] -rw-------. 1 boincer umatlas   3866992 Oct 12 09:56 log.46676269._066536.job.log.1
[2025-10-12 09:56:17] -rw-------. 1 boincer umatlas       357 Oct 12 09:56 output.list
[2025-10-12 09:56:17] -rw-r--r--. 1 boincer umatlas       620 Oct 12 09:56 runtime_log
[2025-10-12 09:56:17] -rw-------. 1 boincer umatlas   4638720 Oct 12 09:56 result.tar.gz
[2025-10-12 09:56:17] -rw-------. 1 boincer umatlas       658 Oct 12 09:56 ztuLDmHkxR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmCshNDmyDRZ1m.diag
[2025-10-12 09:56:17] -rw-r--r--. 1 boincer umatlas      8711 Oct 12 09:56 runtime_log.err
[2025-10-12 09:56:17] -rw-r--r--. 1 boincer umatlas     21060 Oct 12 09:56 stderr.txt
[2025-10-12 09:56:17] HITS file was successfully produced:
[2025-10-12 09:56:17] -rw-------. 1 boincer umatlas 199250549 Oct 12 09:54 shared/HITS.pool.root.1
[2025-10-12 09:56:17]  *** Contents of shared directory: ***
[2025-10-12 09:56:17] total 415292
[2025-10-12 09:56:17] -rw-r--r--. 2 boincer umatlas 220768145 Oct 12 00:08 ATLAS.root_0
[2025-10-12 09:56:17] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:08 start_atlas.sh
[2025-10-12 09:56:17] -rw-r--r--. 2 boincer umatlas    569681 Oct 12 00:08 input.tar.gz
[2025-10-12 09:56:17] -rw-------. 1 boincer umatlas 199250549 Oct 12 09:54 HITS.pool.root.1
[2025-10-12 09:56:17] -rw-------. 1 boincer umatlas   4638720 Oct 12 09:56 result.tar.gz
09:56:18 (2795453): run_atlas exited; CPU time 48811.629174
09:56:18 (2795453): called boinc_finish(0)

</stderr_txt>
]]>

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