Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:04:49 (2022708): wrapper (7.7.26015): starting
00:04:49 (2022708): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 00:04:49] Arguments: --nthreads 12
[2025-10-12 00:04:49] Threads: 12
[2025-10-12 00:04:49] Checking for CVMFS
[2025-10-12 00:04:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 00:04:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 00:04:51] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 00:04:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 00:04:52] 2.13.2.0 133490 115471 149848 151606 1 96 35378425 39288832 8677 16776704 0 65893815 99.730 42386059 34696 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 00:04:52] CVMFS is ok
[2025-10-12 00:04:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 00:04:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 00:04:52] Further information can be found at the LHC@home message board.
[2025-10-12 00:04:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 00:04:52] Checking for apptainer binary...
[2025-10-12 00:04:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 00:04:52] Running /usr/bin/apptainer --version
[2025-10-12 00:04:52] apptainer version 1.4.3-1.el9
[2025-10-12 00:04:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 00:04:53] c-210-28.aglt2.org
[2025-10-12 00:04:53] apptainer works
[2025-10-12 00:04:53] Set ATHENA_PROC_NUMBER=12
[2025-10-12 00:04:53] Set ATHENA_CORE_NUMBER=12
[2025-10-12 00:04:53] Starting ATLAS job with PandaID=6838990864
[2025-10-12 00:04:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 11:12:40]  *** The last 200 lines of the pilot log: ***
[2025-10-12 11:12:40] 2025-10-12 15:11:28,911 | INFO     | monitor loop #2133: job 0:6838990864 is in state 'finished'
[2025-10-12 11:12:40] 2025-10-12 15:11:28,912 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 11:12:40] 2025-10-12 15:11:28,975 | INFO     | fitting pss+swap vs Time
[2025-10-12 11:12:40] 2025-10-12 15:11:28,988 | INFO     | sum of square deviations: 85539581106.54709
[2025-10-12 11:12:40] 2025-10-12 15:11:29,149 | INFO     | sum of deviations: 22725169972.990593
[2025-10-12 11:12:40] 2025-10-12 15:11:29,150 | INFO     | mean x: 1760261948.2918587
[2025-10-12 11:12:40] 2025-10-12 15:11:29,150 | INFO     | mean y: 2664784.073732719
[2025-10-12 11:12:40] 2025-10-12 15:11:29,203 | INFO     | -- intersect: -464981321.44195527
[2025-10-12 11:12:40] 2025-10-12 15:11:29,204 | INFO     | intersect: -464981321.44195527
[2025-10-12 11:12:40] 2025-10-12 15:11:29,205 | INFO     | chi2: 5.463823616433569
[2025-10-12 11:12:40] 2025-10-12 15:11:29,206 | INFO     | sum of square deviations: 83583934347.58073
[2025-10-12 11:12:40] 2025-10-12 15:11:29,369 | INFO     | sum of deviations: 203979217734.04984
[2025-10-12 11:12:40] 2025-10-12 15:11:29,394 | INFO     | mean x: 1760261795.8095975
[2025-10-12 11:12:40] 2025-10-12 15:11:29,395 | INFO     | mean y: 2678895.959752322
[2025-10-12 11:12:40] 2025-10-12 15:11:29,395 | INFO     | -- intersect: -4293084720.804814
[2025-10-12 11:12:40] 2025-10-12 15:11:29,395 | INFO     | intersect: -4293084720.804814
[2025-10-12 11:12:40] 2025-10-12 15:11:29,396 | INFO     | chi2: 2.4814895107418526
[2025-10-12 11:12:40] 2025-10-12 15:11:29,396 | INFO     | current chi2=2.4814895107418526 (change=54.58327931234338 %)
[2025-10-12 11:12:40] 2025-10-12 15:11:29,397 | INFO     | sum of square deviations: 81657979661.97197
[2025-10-12 11:12:40] 2025-10-12 15:11:29,539 | INFO     | sum of deviations: 201031283802.50394
[2025-10-12 11:12:40] 2025-10-12 15:11:29,540 | INFO     | mean x: 1760261643.3135726
[2025-10-12 11:12:40] 2025-10-12 15:11:29,540 | INFO     | mean y: 2678662.5397815914
[2025-10-12 11:12:40] 2025-10-12 15:11:29,540 | INFO     | -- intersect: -4330855665.011413
[2025-10-12 11:12:40] 2025-10-12 15:11:29,540 | INFO     | intersect: -4330855665.011413
[2025-10-12 11:12:40] 2025-10-12 15:11:29,570 | INFO     | chi2: 2.4817686260154663
[2025-10-12 11:12:40] 2025-10-12 15:11:29,571 | INFO     | current chi2=2.4817686260154663 (change=-0.011247892542178868 %)
[2025-10-12 11:12:40] 2025-10-12 15:11:29,571 | INFO     | right removable region: 640
[2025-10-12 11:12:40] 2025-10-12 15:11:29,572 | INFO     | sum of square deviations: 83583063942.19807
[2025-10-12 11:12:40] 2025-10-12 15:11:29,674 | INFO     | sum of deviations: -135228261445.23218
[2025-10-12 11:12:40] 2025-10-12 15:11:29,675 | INFO     | mean x: 1760262100.8080494
[2025-10-12 11:12:40] 2025-10-12 15:11:29,675 | INFO     | mean y: 2677073.5061919503
[2025-10-12 11:12:40] 2025-10-12 15:11:29,675 | INFO     | -- intersect: 2850588747.8714595
[2025-10-12 11:12:40] 2025-10-12 15:11:29,675 | INFO     | intersect: 2850588747.8714595
[2025-10-12 11:12:40] 2025-10-12 15:11:29,676 | INFO     | chi2: 3.324923300594688
[2025-10-12 11:12:40] 2025-10-12 15:11:29,676 | INFO     | current chi2=3.324923300594688 (change=39.14658426025503 %)
[2025-10-12 11:12:40] 2025-10-12 15:11:29,724 | INFO     | sum of square deviations: 81656671933.79712
[2025-10-12 11:12:40] 2025-10-12 15:11:29,827 | INFO     | sum of deviations: -182052703261.02335
[2025-10-12 11:12:40] 2025-10-12 15:11:29,827 | INFO     | mean x: 1760262253.3213727
[2025-10-12 11:12:40] 2025-10-12 15:11:29,827 | INFO     | mean y: 2680773.344773791
[2025-10-12 11:12:40] 2025-10-12 15:11:29,827 | INFO     | -- intersect: 3927167212.4358563
[2025-10-12 11:12:40] 2025-10-12 15:11:29,828 | INFO     | intersect: 3927167212.4358563
[2025-10-12 11:12:40] 2025-10-12 15:11:29,870 | INFO     | chi2: 3.113003458104201
[2025-10-12 11:12:40] 2025-10-12 15:11:29,870 | INFO     | current chi2=3.113003458104201 (change=6.373676122170494 %)
[2025-10-12 11:12:40] 2025-10-12 15:11:29,870 | INFO     | left removable region: 20
[2025-10-12 11:12:40] 2025-10-12 15:11:29,871 | INFO     | sum of square deviations: 73890891849.87096
[2025-10-12 11:12:40] 2025-10-12 15:11:29,952 | INFO     | sum of deviations: 1852039827.3548257
[2025-10-12 11:12:40] 2025-10-12 15:11:29,952 | INFO     | mean x: 1760262222.8387096
[2025-10-12 11:12:40] 2025-10-12 15:11:29,953 | INFO     | mean y: 2694643.8435483873
[2025-10-12 11:12:40] 2025-10-12 15:11:29,953 | INFO     | -- intersect: -41425486.00830316
[2025-10-12 11:12:40] 2025-10-12 15:11:29,953 | INFO     | intersect: -41425486.00830316
[2025-10-12 11:12:40] 2025-10-12 15:11:29,954 | INFO     | chi2: 0.08986378594521378
[2025-10-12 11:12:40] 2025-10-12 15:11:29,960 | INFO     | -- intersect: -41425486.00830316
[2025-10-12 11:12:40] 2025-10-12 15:11:29,960 | INFO     | current memory leak: 0.03 B/s (using 620 data points, chi2=0.09)
[2025-10-12 11:12:40] 2025-10-12 15:11:29,961 | INFO     | could have reported an average CPU frequency of 2600 MHz (25 samples)
[2025-10-12 11:12:40] 2025-10-12 15:11:29,961 | INFO     | ..............................
[2025-10-12 11:12:40] 2025-10-12 15:11:29,962 | INFO     | . Timing measurements:
[2025-10-12 11:12:40] 2025-10-12 15:11:29,962 | INFO     | . get job = 0 s
[2025-10-12 11:12:40] 2025-10-12 15:11:29,962 | INFO     | . initial setup = 6 s
[2025-10-12 11:12:40] 2025-10-12 15:11:29,962 | INFO     | . payload setup = 49 s
[2025-10-12 11:12:40] 2025-10-12 15:11:29,962 | INFO     | . stage-in = 0 s
[2025-10-12 11:12:40] 2025-10-12 15:11:29,962 | INFO     | . payload execution = 39742 s
[2025-10-12 11:12:40] 2025-10-12 15:11:29,962 | INFO     | . stage-out = 6 s
[2025-10-12 11:12:40] 2025-10-12 15:11:29,962 | INFO     | . log creation = 1 s
[2025-10-12 11:12:40] 2025-10-12 15:11:29,962 | INFO     | ..............................
[2025-10-12 11:12:40] 2025-10-12 15:11:30,151 | INFO     | time since job start (39917s) is within the limit (172800.0s)
[2025-10-12 11:12:40] 2025-10-12 15:11:30,654 | INFO     | 
[2025-10-12 11:12:40] 2025-10-12 15:11:30,655 | INFO     | job summary report
[2025-10-12 11:12:40] 2025-10-12 15:11:30,655 | INFO     | --------------------------------------------------
[2025-10-12 11:12:40] 2025-10-12 15:11:30,655 | INFO     | PanDA job id: 6838990864
[2025-10-12 11:12:40] 2025-10-12 15:11:30,655 | INFO     | task id: 46676269
[2025-10-12 11:12:40] 2025-10-12 15:11:30,655 | INFO     | errors: (none)
[2025-10-12 11:12:40] 2025-10-12 15:11:30,655 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 11:12:40] 2025-10-12 15:11:30,655 | INFO     | pilot state: finished 
[2025-10-12 11:12:40] 2025-10-12 15:11:30,655 | INFO     | transexitcode: 0
[2025-10-12 11:12:40] 2025-10-12 15:11:30,655 | INFO     | exeerrorcode: 0
[2025-10-12 11:12:40] 2025-10-12 15:11:30,655 | INFO     | exeerrordiag: 
[2025-10-12 11:12:40] 2025-10-12 15:11:30,656 | INFO     | exitcode: 0
[2025-10-12 11:12:40] 2025-10-12 15:11:30,656 | INFO     | exitmsg: OK
[2025-10-12 11:12:40] 2025-10-12 15:11:30,656 | INFO     | cpuconsumptiontime: 55744 s
[2025-10-12 11:12:40] 2025-10-12 15:11:30,656 | INFO     | nevents: 400
[2025-10-12 11:12:40] 2025-10-12 15:11:30,656 | INFO     | neventsw: 0
[2025-10-12 11:12:40] 2025-10-12 15:11:30,656 | INFO     | pid: 2040590
[2025-10-12 11:12:40] 2025-10-12 15:11:30,656 | INFO     | pgrp: 2040590
[2025-10-12 11:12:40] 2025-10-12 15:11:30,656 | INFO     | corecount: 12
[2025-10-12 11:12:40] 2025-10-12 15:11:30,656 | INFO     | event service: False
[2025-10-12 11:12:40] 2025-10-12 15:11:30,657 | INFO     | sizes: {0: 2348686, 1: 2348885, 2: 2348885, 12: 2348913, 23: 2348941, 33: 2349231, 34: 2349415, 39793: 2391290, 39794: 2391289, 39801: 2400399, 39853: 2400601}
[2025-10-12 11:12:40] 2025-10-12 15:11:30,657 | INFO     | --------------------------------------------------
[2025-10-12 11:12:40] 2025-10-12 15:11:30,657 | INFO     | 
[2025-10-12 11:12:40] 2025-10-12 15:11:30,657 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-12 11:12:40] 2025-10-12 15:11:30,771 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 11:12:40] 2025-10-12 15:11:30,771 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 11:12:40] 2025-10-12 15:11:30,771 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 11:12:40] 2025-10-12 15:11:30,771 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 11:12:40] 2025-10-12 15:11:30,771 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 11:12:40] 2025-10-12 15:11:30,772 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 11:12:40] 2025-10-12 15:11:30,772 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 11:12:40] 2025-10-12 15:11:30,772 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 11:12:40] 2025-10-12 15:11:30,772 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 11:12:40] 2025-10-12 15:11:30,772 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 11:12:40] 2025-10-12 15:11:30,772 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 11:12:40] 2025-10-12 15:11:30,772 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 11:12:40] 2025-10-12 15:11:30,772 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 11:12:40] 2025-10-12 15:11:30,773 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 11:12:40] 2025-10-12 15:11:30,773 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 11:12:40] 2025-10-12 15:11:30,773 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 11:12:40] 2025-10-12 15:11:30,773 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 11:12:40] 2025-10-12 15:11:30,773 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 11:12:40] 2025-10-12 15:11:30,773 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 11:12:40] 2025-10-12 15:11:30,773 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 11:12:40] 2025-10-12 15:11:30,774 | INFO     | job 6838990864 has completed (purged errors)
[2025-10-12 11:12:40] 2025-10-12 15:11:30,774 | INFO     | overall cleanup function is called
[2025-10-12 11:12:40] 2025-10-12 15:11:31,788 | INFO     | --- collectZombieJob: --- 10, [2040590]
[2025-10-12 11:12:40] 2025-10-12 15:11:31,789 | INFO     | zombie collector waiting for pid 2040590
[2025-10-12 11:12:40] 2025-10-12 15:11:31,789 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 11:12:40] 2025-10-12 15:11:31,789 | INFO     | collected zombie processes
[2025-10-12 11:12:40] 2025-10-12 15:11:31,789 | INFO     | will attempt to kill all subprocesses of pid=2040590
[2025-10-12 11:12:40] 2025-10-12 15:11:34,361 | INFO     | process IDs to be killed: [2040590] (in reverse order)
[2025-10-12 11:12:40] 2025-10-12 15:11:34,447 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 11:12:40] 2025-10-12 15:11:34,447 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 11:12:40] 2025-10-12 15:11:34,466 | INFO     | did not find any defunct processes belonging to 2040590
[2025-10-12 11:12:40] 2025-10-12 15:11:34,488 | INFO     | did not find any defunct processes belonging to 2040590
[2025-10-12 11:12:40] 2025-10-12 15:11:34,488 | INFO     | ready for new job
[2025-10-12 11:12:40] 2025-10-12 15:11:34,488 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 11:12:40] 2025-10-12 15:11:34,496 | INFO     | ***************************************
[2025-10-12 11:12:40] 2025-10-12 15:11:34,497 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 11:12:40] 2025-10-12 15:11:34,497 | INFO     | ***************************************
[2025-10-12 11:12:40] 2025-10-12 15:11:34,501 | INFO     | 
[2025-10-12 11:12:40] 2025-10-12 15:11:34,503 | INFO     | architecture information:
[2025-10-12 11:12:40] 2025-10-12 15:11:34,504 | INFO     | executing command: cat /etc/os-release
[2025-10-12 11:12:40] 2025-10-12 15:11:34,580 | INFO     | cat /etc/os-release:
[2025-10-12 11:12:40] NAME="CentOS Linux"
[2025-10-12 11:12:40] VERSION="7 (Core)"
[2025-10-12 11:12:40] ID="centos"
[2025-10-12 11:12:40] ID_LIKE="rhel fedora"
[2025-10-12 11:12:40] VERSION_ID="7"
[2025-10-12 11:12:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 11:12:40] ANSI_COLOR="0;31"
[2025-10-12 11:12:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 11:12:40] HOME_URL="https://www.centos.org/"
[2025-10-12 11:12:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 11:12:40] 
[2025-10-12 11:12:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 11:12:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 11:12:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 11:12:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 11:12:40] 
[2025-10-12 11:12:40] 2025-10-12 15:11:34,581 | INFO     | ***************************************
[2025-10-12 11:12:40] 2025-10-12 15:11:35,115 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-12 11:12:40] 2025-10-12 15:11:35,378 | INFO     | sufficient remaining disk space (53335818240 B)
[2025-10-12 11:12:40] 2025-10-12 15:11:35,378 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 11:12:40] 2025-10-12 15:11:35,378 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 11:12:40] 2025-10-12 15:11:35,378 | INFO     | update_server=False
[2025-10-12 11:12:40] 2025-10-12 15:11:35,379 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 11:12:40] 2025-10-12 15:11:35,379 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 11:12:40] 2025-10-12 15:11:35,401 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 11:12:40] 2025-10-12 15:11:35,402 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 11:12:40] 2025-10-12 15:11:35,402 | INFO     | aborting loop
[2025-10-12 11:12:40] 2025-10-12 15:11:35,403 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 11:12:40] 2025-10-12 15:11:35,913 | INFO     | all data control threads have been joined
[2025-10-12 11:12:40] 2025-10-12 15:11:36,384 | INFO     | [job] retrieve thread has finished
[2025-10-12 11:12:40] 2025-10-12 15:11:36,407 | INFO     | [job] job monitor thread has finished
[2025-10-12 11:12:40] 2025-10-12 15:11:36,409 | INFO     | [job] queue monitor thread has finished
[2025-10-12 11:12:40] 2025-10-12 15:11:36,625 | INFO     | all job control threads have been joined
[2025-10-12 11:12:40] 2025-10-12 15:11:36,696 | INFO     | all payload control threads have been joined
[2025-10-12 11:12:40] 2025-10-12 15:11:36,914 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 11:12:40] 2025-10-12 15:11:36,930 | INFO     | [data] control thread has finished
[2025-10-12 11:12:40] 2025-10-12 15:11:36,929 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 11:12:40] 2025-10-12 15:11:36,929 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 11:12:40] 2025-10-12 15:11:37,063 | INFO     | [payload] validate_post thread has finished
[2025-10-12 11:12:40] 2025-10-12 15:11:37,080 | INFO     | [payload] failed_post thread has finished
[2025-10-12 11:12:40] 2025-10-12 15:11:37,408 | INFO     | [data] copytool_out thread has finished
[2025-10-12 11:12:40] 2025-10-12 15:11:37,487 | INFO     | [data] copytool_in thread has finished
[2025-10-12 11:12:40] 2025-10-12 15:11:37,580 | INFO     | [job] validate thread has finished
[2025-10-12 11:12:40] 2025-10-12 15:11:37,589 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 11:12:40] 2025-10-12 15:11:37,631 | INFO     | [job] control thread has finished
[2025-10-12 11:12:40] 2025-10-12 15:11:37,702 | INFO     | [payload] control thread has finished
[2025-10-12 11:12:40] 2025-10-12 15:11:39,388 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 11:12:40] 2025-10-12 15:12:04,428 | INFO     | PID=2028646 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 11:12:40] 2025-10-12 15:12:04,429 | INFO     | .. there are 7 such processes running
[2025-10-12 11:12:40] 2025-10-12 15:12:04,429 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 11:12:40] 2025-10-12 15:12:04,429 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 11:12:40] 2025-10-12 15:12:04,429 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 11:12:40] 2025-10-12 15:12:31,964 | INFO     | [monitor] cgroup control has ended
[2025-10-12 11:12:40] 2025-10-12 15:12:33,103 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140605490693952)>', '<ExcThread(monitor, started 140605015455488)>']
[2025-10-12 11:12:40] 2025-10-12 15:12:33,872 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 11:12:40] 2025-10-12 15:12:33,872 | INFO     | [monitor] control thread has ended
[2025-10-12 11:12:40] 2025-10-12 15:12:38,129 | INFO     | all workflow threads have been joined
[2025-10-12 11:12:40] 2025-10-12 15:12:38,130 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 11:12:40] 2025-10-12 15:12:38,131 | INFO     | traces error code: 0
[2025-10-12 11:12:40] 2025-10-12 15:12:38,131 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 11:12:40] 2025-10-12 15:12:39,718 [wrapper] ==== pilot stdout END ====
[2025-10-12 11:12:40] 2025-10-12 15:12:39,743 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 11:12:40] 2025-10-12 15:12:39,759 [wrapper] pilotpid: 2028646
[2025-10-12 11:12:40] 2025-10-12 15:12:39,775 [wrapper] Pilot exit status: 0
[2025-10-12 11:12:40] 2025-10-12 15:12:39,921 [wrapper] pandaids: 6838990864
[2025-10-12 11:12:40] 2025-10-12 15:12:40,148 [wrapper] cleanup supervisor_pilot 2956651 2028647
[2025-10-12 11:12:40] 2025-10-12 15:12:40,188 [wrapper] Test setup, not cleaning
[2025-10-12 11:12:40] 2025-10-12 15:12:40,245 [wrapper] apfmon messages muted
[2025-10-12 11:12:40] 2025-10-12 15:12:40,289 [wrapper] ==== wrapper stdout END ====
[2025-10-12 11:12:40] 2025-10-12 15:12:40,338 [wrapper] ==== wrapper stderr END ====
[2025-10-12 11:12:40]  *** Error codes and diagnostics ***
[2025-10-12 11:12:40]     "exeErrorCode": 0,
[2025-10-12 11:12:40]     "exeErrorDiag": "",
[2025-10-12 11:12:40]     "pilotErrorCode": 0,
[2025-10-12 11:12:40]     "pilotErrorDiag": "",
[2025-10-12 11:12:41]  *** Listing of results directory ***
[2025-10-12 11:12:41] total 419348
[2025-10-12 11:12:41] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 18:51 pilot3.tar.gz
[2025-10-12 11:12:41] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 18:57 queuedata.json
[2025-10-12 11:12:41] -rwx------. 1 boincer umatlas     36292 Oct 11 18:57 runpilot2-wrapper.sh
[2025-10-12 11:12:41] -rw-r--r--. 1 boincer umatlas       100 Oct 12 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 11:12:41] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 00:04 run_atlas
[2025-10-12 11:12:41] -rw-r--r--. 1 boincer umatlas       105 Oct 12 00:04 job.xml
[2025-10-12 11:12:41] -rw-r--r--. 2 boincer umatlas 223496834 Oct 12 00:04 EVNT.46676267._002673.pool.root.1
[2025-10-12 11:12:41] -rw-r--r--. 2 boincer umatlas    569681 Oct 12 00:04 input.tar.gz
[2025-10-12 11:12:41] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:04 start_atlas.sh
[2025-10-12 11:12:41] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 00:04 shared
[2025-10-12 11:12:41] -rw-r--r--. 1 boincer umatlas         0 Oct 12 00:04 boinc_lockfile
[2025-10-12 11:12:41] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 00:04 pandaJob.out
[2025-10-12 11:12:41] -rw-------. 1 boincer umatlas    975512 Oct 12 00:06 agis_schedconf.cvmfs.json
[2025-10-12 11:12:41] drwx------. 5 boincer umatlas      4096 Oct 12 00:06 pilot3
[2025-10-12 11:12:41] -rw-------. 1 boincer umatlas 191196981 Oct 12 11:06 HITS.46676269._066353.pool.root.1
[2025-10-12 11:12:41] -rw-r--r--. 1 boincer umatlas       531 Oct 12 11:06 boinc_task_state.xml
[2025-10-12 11:12:41] -rw-------. 1 boincer umatlas      1042 Oct 12 11:10 memory_monitor_summary.json
[2025-10-12 11:12:41] -rw-------. 1 boincer umatlas   1560580 Oct 12 11:10 agis_ddmendpoints.agis.ALL.json
[2025-10-12 11:12:41] -rw-------. 1 boincer umatlas    820478 Oct 12 11:10 log.46676269._066353.job.log.tgz.1
[2025-10-12 11:12:41] -rw-------. 1 boincer umatlas        95 Oct 12 11:11 pilot_heartbeat.json
[2025-10-12 11:12:41] -rw-------. 1 boincer umatlas      7827 Oct 12 11:11 heartbeat.json
[2025-10-12 11:12:41] -rw-r--r--. 1 boincer umatlas      6661 Oct 12 11:12 init_data.xml
[2025-10-12 11:12:41] -rw-r--r--. 1 boincer umatlas        28 Oct 12 11:12 wrapper_checkpoint.txt
[2025-10-12 11:12:41] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 11:12 boinc_mmap_file
[2025-10-12 11:12:41] -rw-------. 1 boincer umatlas      4823 Oct 12 11:12 pilotlog.txt
[2025-10-12 11:12:41] -rw-------. 1 boincer umatlas   4583907 Oct 12 11:12 log.46676269._066353.job.log.1
[2025-10-12 11:12:41] -rw-------. 1 boincer umatlas       357 Oct 12 11:12 output.list
[2025-10-12 11:12:41] -rw-r--r--. 1 boincer umatlas       620 Oct 12 11:12 runtime_log
[2025-10-12 11:12:41] -rw-------. 1 boincer umatlas   5427200 Oct 12 11:12 result.tar.gz
[2025-10-12 11:12:41] -rw-------. 1 boincer umatlas       658 Oct 12 11:12 Q3wKDmKixR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm5qhNDmwE9LSm.diag
[2025-10-12 11:12:41] -rw-r--r--. 1 boincer umatlas      8706 Oct 12 11:12 runtime_log.err
[2025-10-12 11:12:41] -rw-r--r--. 1 boincer umatlas     21110 Oct 12 11:12 stderr.txt
[2025-10-12 11:12:41] HITS file was successfully produced:
[2025-10-12 11:12:41] -rw-------. 1 boincer umatlas 191196981 Oct 12 11:06 shared/HITS.pool.root.1
[2025-10-12 11:12:41]  *** Contents of shared directory: ***
[2025-10-12 11:12:41] total 410860
[2025-10-12 11:12:41] -rw-r--r--. 2 boincer umatlas 223496834 Oct 12 00:04 ATLAS.root_0
[2025-10-12 11:12:41] -rw-r--r--. 2 boincer umatlas    569681 Oct 12 00:04 input.tar.gz
[2025-10-12 11:12:41] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:04 start_atlas.sh
[2025-10-12 11:12:41] -rw-------. 1 boincer umatlas 191196981 Oct 12 11:06 HITS.pool.root.1
[2025-10-12 11:12:41] -rw-------. 1 boincer umatlas   5427200 Oct 12 11:12 result.tar.gz
11:12:43 (2022708): run_atlas exited; CPU time 56542.539377
11:12:43 (2022708): called boinc_finish(0)

</stderr_txt>
]]>

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