Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:04:29 (712867): wrapper (7.7.26015): starting
00:04:29 (712867): wrapper: running run_atlas (--nthreads 9)
[2025-10-12 00:04:29] Arguments: --nthreads 9
[2025-10-12 00:04:29] Threads: 9
[2025-10-12 00:04:29] Checking for CVMFS
[2025-10-12 00:04:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 00:04:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 00:04:31] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 00:04:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 00:04:33] 2.13.2.0 116703 137607 306168 151607 3 54 20222824 32935936 30833 16776704 0 91679394 99.668 85713351 30425 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 00:04:33] CVMFS is ok
[2025-10-12 00:04:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 00:04:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 00:04:34] Further information can be found at the LHC@home message board.
[2025-10-12 00:04:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 00:04:34] Checking for apptainer binary...
[2025-10-12 00:04:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 00:04:34] Running /usr/bin/apptainer --version
[2025-10-12 00:04:34] apptainer version 1.4.3-1.el9
[2025-10-12 00:04:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 00:04:34] c-5-3.aglt2.org
[2025-10-12 00:04:34] apptainer works
[2025-10-12 00:04:35] Set ATHENA_PROC_NUMBER=9
[2025-10-12 00:04:35] Set ATHENA_CORE_NUMBER=9
[2025-10-12 00:04:35] Starting ATLAS job with PandaID=6839242360
[2025-10-12 00:04:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 12:38:27]  *** The last 200 lines of the pilot log: ***
[2025-10-12 12:38:27] 2025-10-12 16:38:11,113 | INFO     | sum of square deviations: 124624696261.29118
[2025-10-12 12:38:27] 2025-10-12 16:38:11,144 | INFO     | sum of deviations: 208394518417.80133
[2025-10-12 12:38:27] 2025-10-12 16:38:11,144 | INFO     | mean x: 1760264547.4159892
[2025-10-12 12:38:27] 2025-10-12 16:38:11,144 | INFO     | mean y: 2096262.1016260162
[2025-10-12 12:38:27] 2025-10-12 16:38:11,144 | INFO     | -- intersect: -2941377171.747957
[2025-10-12 12:38:27] 2025-10-12 16:38:11,144 | INFO     | intersect: -2941377171.747957
[2025-10-12 12:38:27] 2025-10-12 16:38:11,146 | INFO     | chi2: 3.242306319333193
[2025-10-12 12:38:27] 2025-10-12 16:38:11,147 | INFO     | sum of square deviations: 122108752934.56879
[2025-10-12 12:38:27] 2025-10-12 16:38:11,162 | INFO     | sum of deviations: 231203973339.93854
[2025-10-12 12:38:27] 2025-10-12 16:38:11,163 | INFO     | mean x: 1760264394.9222374
[2025-10-12 12:38:27] 2025-10-12 16:38:11,163 | INFO     | mean y: 2097644.525238745
[2025-10-12 12:38:27] 2025-10-12 16:38:11,163 | INFO     | -- intersect: -3330833963.1943307
[2025-10-12 12:38:27] 2025-10-12 16:38:11,163 | INFO     | intersect: -3330833963.1943307
[2025-10-12 12:38:27] 2025-10-12 16:38:11,164 | INFO     | chi2: 3.182616019021033
[2025-10-12 12:38:27] 2025-10-12 16:38:11,164 | INFO     | current chi2=3.182616019021033 (change=1.840982758360587 %)
[2025-10-12 12:38:27] 2025-10-12 16:38:11,164 | INFO     | right removable region: 732
[2025-10-12 12:38:27] 2025-10-12 16:38:11,166 | INFO     | sum of square deviations: 122108340574.56876
[2025-10-12 12:38:27] 2025-10-12 16:38:11,180 | INFO     | sum of deviations: 65945395375.79668
[2025-10-12 12:38:27] 2025-10-12 16:38:11,181 | INFO     | mean x: 1760264699.9222374
[2025-10-12 12:38:27] 2025-10-12 16:38:11,181 | INFO     | mean y: 2104883.2946793996
[2025-10-12 12:38:27] 2025-10-12 16:38:11,181 | INFO     | -- intersect: -948537399.2571977
[2025-10-12 12:38:27] 2025-10-12 16:38:11,181 | INFO     | intersect: -948537399.2571977
[2025-10-12 12:38:27] 2025-10-12 16:38:11,182 | INFO     | chi2: 1.127724959549494
[2025-10-12 12:38:27] 2025-10-12 16:38:11,182 | INFO     | current chi2=1.127724959549494 (change=65.21843254521924 %)
[2025-10-12 12:38:27] 2025-10-12 16:38:11,183 | INFO     | sum of square deviations: 119626167733.99496
[2025-10-12 12:38:27] 2025-10-12 16:38:11,197 | INFO     | sum of deviations: 2446381662.409362
[2025-10-12 12:38:27] 2025-10-12 16:38:11,197 | INFO     | mean x: 1760264852.4258242
[2025-10-12 12:38:27] 2025-10-12 16:38:11,197 | INFO     | mean y: 2108782.776098901
[2025-10-12 12:38:27] 2025-10-12 16:38:11,197 | INFO     | -- intersect: -33889023.87046906
[2025-10-12 12:38:27] 2025-10-12 16:38:11,197 | INFO     | intersect: -33889023.87046906
[2025-10-12 12:38:27] 2025-10-12 16:38:11,198 | INFO     | chi2: 0.7560923548052844
[2025-10-12 12:38:27] 2025-10-12 16:38:11,199 | INFO     | current chi2=0.7560923548052844 (change=32.95418812869676 %)
[2025-10-12 12:38:27] 2025-10-12 16:38:11,200 | INFO     | sum of square deviations: 117177989339.9666
[2025-10-12 12:38:27] 2025-10-12 16:38:11,213 | INFO     | sum of deviations: -27754278671.07469
[2025-10-12 12:38:27] 2025-10-12 16:38:11,213 | INFO     | mean x: 1760265004.925311
[2025-10-12 12:38:27] 2025-10-12 16:38:11,214 | INFO     | mean y: 2110660.6652835407
[2025-10-12 12:38:27] 2025-10-12 16:38:11,214 | INFO     | -- intersect: 419039520.40101314
[2025-10-12 12:38:27] 2025-10-12 16:38:11,214 | INFO     | intersect: 419039520.40101314
[2025-10-12 12:38:27] 2025-10-12 16:38:11,215 | INFO     | chi2: 0.649956339602772
[2025-10-12 12:38:27] 2025-10-12 16:38:11,215 | INFO     | current chi2=0.649956339602772 (change=14.037440602060505 %)
[2025-10-12 12:38:27] 2025-10-12 16:38:11,215 | INFO     | left removable region: 30
[2025-10-12 12:38:27] 2025-10-12 16:38:11,216 | INFO     | sum of square deviations: 107260416340.0799
[2025-10-12 12:38:27] 2025-10-12 16:38:11,232 | INFO     | sum of deviations: -25403262245.05702
[2025-10-12 12:38:27] 2025-10-12 16:38:11,232 | INFO     | mean x: 1760265279.4301994
[2025-10-12 12:38:27] 2025-10-12 16:38:11,232 | INFO     | mean y: 2113432.04985755
[2025-10-12 12:38:27] 2025-10-12 16:38:11,232 | INFO     | -- intersect: 419009823.4684387
[2025-10-12 12:38:27] 2025-10-12 16:38:11,232 | INFO     | intersect: 419009823.4684387
[2025-10-12 12:38:27] 2025-10-12 16:38:11,234 | INFO     | chi2: 0.5765559193325015
[2025-10-12 12:38:27] 2025-10-12 16:38:11,234 | INFO     | -- intersect: 419009823.4684387
[2025-10-12 12:38:27] 2025-10-12 16:38:11,234 | INFO     | current memory leak: -0.24 B/s (using 702 data points, chi2=0.58)
[2025-10-12 12:38:27] 2025-10-12 16:38:11,242 | INFO     | could have reported an average CPU frequency of 2601 MHz (28 samples)
[2025-10-12 12:38:27] 2025-10-12 16:38:11,242 | INFO     | ..............................
[2025-10-12 12:38:27] 2025-10-12 16:38:11,242 | INFO     | . Timing measurements:
[2025-10-12 12:38:27] 2025-10-12 16:38:11,243 | INFO     | . get job = 0 s
[2025-10-12 12:38:27] 2025-10-12 16:38:11,243 | INFO     | . initial setup = 6 s
[2025-10-12 12:38:27] 2025-10-12 16:38:11,243 | INFO     | . payload setup = 36 s
[2025-10-12 12:38:27] 2025-10-12 16:38:11,243 | INFO     | . stage-in = 0 s
[2025-10-12 12:38:27] 2025-10-12 16:38:11,243 | INFO     | . payload execution = 45026 s
[2025-10-12 12:38:27] 2025-10-12 16:38:11,243 | INFO     | . stage-out = 2 s
[2025-10-12 12:38:27] 2025-10-12 16:38:11,243 | INFO     | . log creation = 0 s
[2025-10-12 12:38:27] 2025-10-12 16:38:11,243 | INFO     | ..............................
[2025-10-12 12:38:27] 2025-10-12 16:38:11,295 | INFO     | time since job start (45149s) is within the limit (172800.0s)
[2025-10-12 12:38:27] 2025-10-12 16:38:11,492 | INFO     | 
[2025-10-12 12:38:27] 2025-10-12 16:38:11,493 | INFO     | job summary report
[2025-10-12 12:38:27] 2025-10-12 16:38:11,493 | INFO     | --------------------------------------------------
[2025-10-12 12:38:27] 2025-10-12 16:38:11,493 | INFO     | PanDA job id: 6839242360
[2025-10-12 12:38:27] 2025-10-12 16:38:11,493 | INFO     | task id: 46676269
[2025-10-12 12:38:27] 2025-10-12 16:38:11,493 | INFO     | errors: (none)
[2025-10-12 12:38:27] 2025-10-12 16:38:11,493 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 12:38:27] 2025-10-12 16:38:11,494 | INFO     | pilot state: finished 
[2025-10-12 12:38:27] 2025-10-12 16:38:11,494 | INFO     | transexitcode: 0
[2025-10-12 12:38:27] 2025-10-12 16:38:11,494 | INFO     | exeerrorcode: 0
[2025-10-12 12:38:27] 2025-10-12 16:38:11,494 | INFO     | exeerrordiag: 
[2025-10-12 12:38:27] 2025-10-12 16:38:11,494 | INFO     | exitcode: 0
[2025-10-12 12:38:27] 2025-10-12 16:38:11,494 | INFO     | exitmsg: OK
[2025-10-12 12:38:27] 2025-10-12 16:38:11,494 | INFO     | cpuconsumptiontime: 49478 s
[2025-10-12 12:38:27] 2025-10-12 16:38:11,494 | INFO     | nevents: 400
[2025-10-12 12:38:27] 2025-10-12 16:38:11,494 | INFO     | neventsw: 0
[2025-10-12 12:38:27] 2025-10-12 16:38:11,494 | INFO     | pid: 737015
[2025-10-12 12:38:27] 2025-10-12 16:38:11,495 | INFO     | pgrp: 737015
[2025-10-12 12:38:27] 2025-10-12 16:38:11,495 | INFO     | corecount: 9
[2025-10-12 12:38:27] 2025-10-12 16:38:11,495 | INFO     | event service: False
[2025-10-12 12:38:27] 2025-10-12 16:38:11,495 | INFO     | sizes: {0: 2348629, 1: 2348685, 4: 2348713, 5: 2348968, 6: 2348968, 18: 2348996, 30: 2349152, 37: 2349442, 41: 2349470, 45067: 2392818, 45070: 2401816, 45073: 2402
[2025-10-12 12:38:27] 2025-10-12 16:38:11,495 | INFO     | --------------------------------------------------
[2025-10-12 12:38:27] 2025-10-12 16:38:11,495 | INFO     | 
[2025-10-12 12:38:27] 2025-10-12 16:38:11,495 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-12 12:38:27] 2025-10-12 16:38:11,574 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 12:38:27] 2025-10-12 16:38:11,575 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 12:38:27] 2025-10-12 16:38:11,575 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 12:38:27] 2025-10-12 16:38:11,575 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 12:38:27] 2025-10-12 16:38:11,575 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 12:38:27] 2025-10-12 16:38:11,575 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 12:38:27] 2025-10-12 16:38:11,576 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 12:38:27] 2025-10-12 16:38:11,576 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 12:38:27] 2025-10-12 16:38:11,576 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 12:38:27] 2025-10-12 16:38:11,576 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 12:38:27] 2025-10-12 16:38:11,576 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 12:38:27] 2025-10-12 16:38:11,576 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 12:38:27] 2025-10-12 16:38:11,576 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 12:38:27] 2025-10-12 16:38:11,576 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 12:38:27] 2025-10-12 16:38:11,576 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 12:38:27] 2025-10-12 16:38:11,577 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 12:38:27] 2025-10-12 16:38:11,577 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 12:38:27] 2025-10-12 16:38:11,577 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 12:38:27] 2025-10-12 16:38:11,577 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 12:38:27] 2025-10-12 16:38:11,577 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 12:38:27] 2025-10-12 16:38:11,577 | INFO     | job 6839242360 has completed (purged errors)
[2025-10-12 12:38:27] 2025-10-12 16:38:11,578 | INFO     | overall cleanup function is called
[2025-10-12 12:38:27] 2025-10-12 16:38:12,603 | INFO     | --- collectZombieJob: --- 10, [737015]
[2025-10-12 12:38:27] 2025-10-12 16:38:12,603 | INFO     | zombie collector waiting for pid 737015
[2025-10-12 12:38:27] 2025-10-12 16:38:12,603 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 12:38:27] 2025-10-12 16:38:12,604 | INFO     | collected zombie processes
[2025-10-12 12:38:27] 2025-10-12 16:38:12,604 | INFO     | will attempt to kill all subprocesses of pid=737015
[2025-10-12 12:38:27] 2025-10-12 16:38:13,452 | INFO     | PID=720400 has CPU usage=13.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 12:38:27] 2025-10-12 16:38:13,453 | INFO     | .. there are 41 such processes running
[2025-10-12 12:38:27] 2025-10-12 16:38:13,534 | INFO     | process IDs to be killed: [737015] (in reverse order)
[2025-10-12 12:38:27] 2025-10-12 16:38:13,658 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 12:38:27] 2025-10-12 16:38:13,658 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 12:38:27] 2025-10-12 16:38:13,673 | INFO     | did not find any defunct processes belonging to 737015
[2025-10-12 12:38:27] 2025-10-12 16:38:13,688 | INFO     | did not find any defunct processes belonging to 737015
[2025-10-12 12:38:27] 2025-10-12 16:38:13,689 | INFO     | ready for new job
[2025-10-12 12:38:27] 2025-10-12 16:38:13,689 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 12:38:27] 2025-10-12 16:38:13,693 | INFO     | ***************************************
[2025-10-12 12:38:27] 2025-10-12 16:38:13,693 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 12:38:27] 2025-10-12 16:38:13,693 | INFO     | ***************************************
[2025-10-12 12:38:27] 2025-10-12 16:38:13,693 | INFO     | 
[2025-10-12 12:38:27] 2025-10-12 16:38:13,707 | INFO     | architecture information:
[2025-10-12 12:38:27] 2025-10-12 16:38:13,708 | INFO     | executing command: cat /etc/os-release
[2025-10-12 12:38:27] 2025-10-12 16:38:13,724 | INFO     | cat /etc/os-release:
[2025-10-12 12:38:27] NAME="CentOS Linux"
[2025-10-12 12:38:27] VERSION="7 (Core)"
[2025-10-12 12:38:27] ID="centos"
[2025-10-12 12:38:27] ID_LIKE="rhel fedora"
[2025-10-12 12:38:27] VERSION_ID="7"
[2025-10-12 12:38:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 12:38:27] ANSI_COLOR="0;31"
[2025-10-12 12:38:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 12:38:27] HOME_URL="https://www.centos.org/"
[2025-10-12 12:38:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 12:38:27] 
[2025-10-12 12:38:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 12:38:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 12:38:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 12:38:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 12:38:27] 
[2025-10-12 12:38:27] 2025-10-12 16:38:13,725 | INFO     | ***************************************
[2025-10-12 12:38:27] 2025-10-12 16:38:14,228 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-12 12:38:27] 2025-10-12 16:38:14,261 | INFO     | sufficient remaining disk space (76106694656 B)
[2025-10-12 12:38:27] 2025-10-12 16:38:14,262 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 12:38:27] 2025-10-12 16:38:14,262 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 12:38:27] 2025-10-12 16:38:14,262 | INFO     | update_server=False
[2025-10-12 12:38:27] 2025-10-12 16:38:14,262 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 12:38:27] 2025-10-12 16:38:14,263 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 12:38:27] 2025-10-12 16:38:14,269 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-12 12:38:27] 2025-10-12 16:38:14,269 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 12:38:27] 2025-10-12 16:38:14,269 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 12:38:27] 2025-10-12 16:38:14,270 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 12:38:27] 2025-10-12 16:38:14,322 | INFO     | all data control threads have been joined
[2025-10-12 12:38:27] 2025-10-12 16:38:14,521 | INFO     | all payload control threads have been joined
[2025-10-12 12:38:27] 2025-10-12 16:38:14,627 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 12:38:27] 2025-10-12 16:38:14,629 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 12:38:27] 2025-10-12 16:38:14,630 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 12:38:27] 2025-10-12 16:38:14,630 | INFO     | will abort loop
[2025-10-12 12:38:27] 2025-10-12 16:38:15,268 | INFO     | [job] retrieve thread has finished
[2025-10-12 12:38:27] 2025-10-12 16:38:15,330 | INFO     | [data] control thread has finished
[2025-10-12 12:38:27] 2025-10-12 16:38:15,354 | INFO     | all job control threads have been joined
[2025-10-12 12:38:27] 2025-10-12 16:38:15,527 | INFO     | [payload] control thread has finished
[2025-10-12 12:38:27] 2025-10-12 16:38:15,612 | INFO     | [payload] validate_post thread has finished
[2025-10-12 12:38:27] 2025-10-12 16:38:15,640 | INFO     | [job] job monitor thread has finished
[2025-10-12 12:38:27] 2025-10-12 16:38:15,676 | INFO     | [job] validate thread has finished
[2025-10-12 12:38:27] 2025-10-12 16:38:15,680 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 12:38:27] 2025-10-12 16:38:15,697 | INFO     | [data] copytool_in thread has finished
[2025-10-12 12:38:27] 2025-10-12 16:38:15,765 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 12:38:27] 2025-10-12 16:38:15,972 | INFO     | [payload] failed_post thread has finished
[2025-10-12 12:38:27] 2025-10-12 16:38:16,160 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 12:38:27] 2025-10-12 16:38:16,172 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 12:38:27] 2025-10-12 16:38:16,269 | INFO     | [data] copytool_out thread has finished
[2025-10-12 12:38:27] 2025-10-12 16:38:16,360 | INFO     | [job] control thread has finished
[2025-10-12 12:38:27] 2025-10-12 16:38:16,535 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 12:38:27] 2025-10-12 16:38:16,549 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 12:38:27] 2025-10-12 16:38:17,444 | INFO     | [monitor] cgroup control has ended
[2025-10-12 12:38:27] 2025-10-12 16:38:17,555 | INFO     | [job] queue monitor thread has finished
[2025-10-12 12:38:27] 2025-10-12 16:38:20,168 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 12:38:27] 2025-10-12 16:38:21,806 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139840456865600)>', '<ExcThread(monitor, started 139839974405888)>']
[2025-10-12 12:38:27] 2025-10-12 16:38:22,322 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 12:38:27] 2025-10-12 16:38:22,322 | INFO     | [monitor] control thread has ended
[2025-10-12 12:38:27] 2025-10-12 16:38:26,831 | INFO     | all workflow threads have been joined
[2025-10-12 12:38:27] 2025-10-12 16:38:26,832 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 12:38:27] 2025-10-12 16:38:26,832 | INFO     | traces error code: 0
[2025-10-12 12:38:27] 2025-10-12 16:38:26,832 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 12:38:27] 2025-10-12 16:38:27,011 [wrapper] ==== pilot stdout END ====
[2025-10-12 12:38:27] 2025-10-12 16:38:27,014 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 12:38:27] 2025-10-12 16:38:27,016 [wrapper] pilotpid: 720400
[2025-10-12 12:38:27] 2025-10-12 16:38:27,021 [wrapper] Pilot exit status: 0
[2025-10-12 12:38:27] 2025-10-12 16:38:27,040 [wrapper] pandaids: 6839242360
[2025-10-12 12:38:27] 2025-10-12 16:38:27,145 [wrapper] cleanup supervisor_pilot 3193029 720401
[2025-10-12 12:38:27] 2025-10-12 16:38:27,148 [wrapper] Test setup, not cleaning
[2025-10-12 12:38:27] 2025-10-12 16:38:27,151 [wrapper] apfmon messages muted
[2025-10-12 12:38:27] 2025-10-12 16:38:27,154 [wrapper] ==== wrapper stdout END ====
[2025-10-12 12:38:27] 2025-10-12 16:38:27,156 [wrapper] ==== wrapper stderr END ====
[2025-10-12 12:38:27]  *** Error codes and diagnostics ***
[2025-10-12 12:38:27]     "exeErrorCode": 0,
[2025-10-12 12:38:27]     "exeErrorDiag": "",
[2025-10-12 12:38:27]     "pilotErrorCode": 0,
[2025-10-12 12:38:27]     "pilotErrorDiag": "",
[2025-10-12 12:38:27]  *** Listing of results directory ***
[2025-10-12 12:38:27] total 421608
[2025-10-12 12:38:27] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 21:52 queuedata.json
[2025-10-12 12:38:27] -rwx------. 1 boincer umatlas     36292 Oct 11 21:53 runpilot2-wrapper.sh
[2025-10-12 12:38:27] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 21:53 pilot3.tar.gz
[2025-10-12 12:38:27] -rw-r--r--. 1 boincer umatlas       100 Oct 12 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 12:38:27] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 00:04 run_atlas
[2025-10-12 12:38:27] -rw-r--r--. 1 boincer umatlas       105 Oct 12 00:04 job.xml
[2025-10-12 12:38:27] -rw-r--r--. 2 boincer umatlas 219481618 Oct 12 00:04 EVNT.46676267._003169.pool.root.1
[2025-10-12 12:38:27] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:04 start_atlas.sh
[2025-10-12 12:38:27] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 00:04 shared
[2025-10-12 12:38:27] -rw-r--r--. 2 boincer umatlas    569679 Oct 12 00:04 input.tar.gz
[2025-10-12 12:38:27] -rw-r--r--. 1 boincer umatlas         0 Oct 12 00:04 boinc_lockfile
[2025-10-12 12:38:27] -rw-r--r--. 1 boincer umatlas      2549 Oct 12 00:04 pandaJob.out
[2025-10-12 12:38:27] -rw-------. 1 boincer umatlas    975512 Oct 12 00:05 agis_schedconf.cvmfs.json
[2025-10-12 12:38:27] drwx------. 5 boincer umatlas      4096 Oct 12 00:05 pilot3
[2025-10-12 12:38:27] -rw-r--r--. 1 boincer umatlas      6704 Oct 12 12:29 init_data.xml
[2025-10-12 12:38:27] -rw-------. 1 boincer umatlas 197167289 Oct 12 12:37 HITS.46676269._069004.pool.root.1
[2025-10-12 12:38:27] -rw-r--r--. 1 boincer umatlas       531 Oct 12 12:37 boinc_task_state.xml
[2025-10-12 12:38:27] -rw-------. 1 boincer umatlas      1045 Oct 12 12:37 memory_monitor_summary.json
[2025-10-12 12:38:27] -rw-------. 1 boincer umatlas        95 Oct 12 12:37 pilot_heartbeat.json
[2025-10-12 12:38:27] -rw-------. 1 boincer umatlas   1560580 Oct 12 12:37 agis_ddmendpoints.agis.ALL.json
[2025-10-12 12:38:27] -rw-------. 1 boincer umatlas    804904 Oct 12 12:37 log.46676269._069004.job.log.tgz.1
[2025-10-12 12:38:27] -rw-------. 1 boincer umatlas      7826 Oct 12 12:38 heartbeat.json
[2025-10-12 12:38:27] -rw-------. 1 boincer umatlas      4738 Oct 12 12:38 pilotlog.txt
[2025-10-12 12:38:27] -rw-------. 1 boincer umatlas   4780343 Oct 12 12:38 log.46676269._069004.job.log.1
[2025-10-12 12:38:27] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 12:38 boinc_mmap_file
[2025-10-12 12:38:27] -rw-r--r--. 1 boincer umatlas        28 Oct 12 12:38 wrapper_checkpoint.txt
[2025-10-12 12:38:27] -rw-------. 1 boincer umatlas       357 Oct 12 12:38 output.list
[2025-10-12 12:38:27] -rw-r--r--. 1 boincer umatlas       620 Oct 12 12:38 runtime_log
[2025-10-12 12:38:27] -rw-------. 1 boincer umatlas   5601280 Oct 12 12:38 result.tar.gz
[2025-10-12 12:38:27] -rw-r--r--. 1 boincer umatlas      8689 Oct 12 12:38 runtime_log.err
[2025-10-12 12:38:27] -rw-------. 1 boincer umatlas       655 Oct 12 12:38 BsUNDmMS0R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmyHiNDm1p0lIn.diag
[2025-10-12 12:38:27] -rw-r--r--. 1 boincer umatlas     21118 Oct 12 12:38 stderr.txt
[2025-10-12 12:38:27] HITS file was successfully produced:
[2025-10-12 12:38:27] -rw-------. 1 boincer umatlas 197167289 Oct 12 12:37 shared/HITS.pool.root.1
[2025-10-12 12:38:27]  *** Contents of shared directory: ***
[2025-10-12 12:38:27] total 412944
[2025-10-12 12:38:27] -rw-r--r--. 2 boincer umatlas 219481618 Oct 12 00:04 ATLAS.root_0
[2025-10-12 12:38:27] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:04 start_atlas.sh
[2025-10-12 12:38:27] -rw-r--r--. 2 boincer umatlas    569679 Oct 12 00:04 input.tar.gz
[2025-10-12 12:38:27] -rw-------. 1 boincer umatlas 197167289 Oct 12 12:37 HITS.pool.root.1
[2025-10-12 12:38:27] -rw-------. 1 boincer umatlas   5601280 Oct 12 12:38 result.tar.gz
12:38:49 (712867): run_atlas exited; CPU time 51272.344135
12:38:49 (712867): called boinc_finish(0)

</stderr_txt>
]]>

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