Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:38:53 (3200568): wrapper (7.7.26015): starting
12:38:53 (3200568): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 12:38:53] Arguments: --nthreads 12
[2025-10-12 12:38:53] Threads: 12
[2025-10-12 12:38:53] Checking for CVMFS
[2025-10-12 12:38:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 12:38:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 12:38:53] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 12:38:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 12:38:54] 2.13.2.0 116703 138361 308844 151627 2 81 23208624 32935937 24306 16776704 0 93920731 99.673 86475201 30408 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 12:38:54] CVMFS is ok
[2025-10-12 12:38:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 12:38:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 12:38:54] Further information can be found at the LHC@home message board.
[2025-10-12 12:38:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 12:38:54] Checking for apptainer binary...
[2025-10-12 12:38:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 12:38:54] Running /usr/bin/apptainer --version
[2025-10-12 12:38:54] apptainer version 1.4.3-1.el9
[2025-10-12 12:38:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 12:38:54] c-5-3.aglt2.org
[2025-10-12 12:38:54] apptainer works
[2025-10-12 12:38:54] Set ATHENA_PROC_NUMBER=12
[2025-10-12 12:38:54] Set ATHENA_CORE_NUMBER=12
[2025-10-12 12:38:54] Starting ATLAS job with PandaID=6839242470
[2025-10-12 12:38:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 15:53:45]  *** The last 200 lines of the pilot log: ***
[2025-10-12 15:53:45] 2025-10-12 19:52:44,713 | INFO     | monitor loop #703: job 0:6839242470 is in state 'finished'
[2025-10-12 15:53:45] 2025-10-12 19:52:44,713 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 15:53:45] 2025-10-12 19:52:45,330 | INFO     | time since job start (11609s) is within the limit (172800.0s)
[2025-10-12 15:53:45] 2025-10-12 19:52:46,587 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 15:53:45] 2025-10-12 19:52:46,594 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2739.963750000001
[2025-10-12 15:53:45] 2025-10-12 19:52:46,602 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6839242470/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 15:53:45] 2025-10-12 19:52:46,602 | INFO     | extracted standard info from prmon json
[2025-10-12 15:53:45] 2025-10-12 19:52:46,603 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 15:53:45] 2025-10-12 19:52:46,603 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 15:53:45] 2025-10-12 19:52:46,603 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 15:53:45] 2025-10-12 19:52:46,603 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 15:53:45] 2025-10-12 19:52:46,607 | INFO     | fitting pss+swap vs Time
[2025-10-12 15:53:45] 2025-10-12 19:52:46,608 | INFO     | sum of square deviations: 2126693550.6789515
[2025-10-12 15:53:45] 2025-10-12 19:52:46,609 | INFO     | sum of deviations: -16649030928.131569
[2025-10-12 15:53:45] 2025-10-12 19:52:46,609 | INFO     | mean x: 1760292981.8894737
[2025-10-12 15:53:45] 2025-10-12 19:52:46,609 | INFO     | mean y: 2497654.1842105263
[2025-10-12 15:53:45] 2025-10-12 19:52:46,609 | INFO     | -- intersect: 13783125468.988281
[2025-10-12 15:53:45] 2025-10-12 19:52:46,609 | INFO     | intersect: 13783125468.988281
[2025-10-12 15:53:45] 2025-10-12 19:52:46,610 | INFO     | chi2: 2.9481655313682325
[2025-10-12 15:53:45] 2025-10-12 19:52:46,610 | INFO     | sum of square deviations: 1963187472.4000015
[2025-10-12 15:53:45] 2025-10-12 19:52:46,611 | INFO     | sum of deviations: -4487804161.600001
[2025-10-12 15:53:45] 2025-10-12 19:52:46,611 | INFO     | mean x: 1760292829.4
[2025-10-12 15:53:45] 2025-10-12 19:52:46,612 | INFO     | mean y: 2508758.8864864865
[2025-10-12 15:53:45] 2025-10-12 19:52:46,612 | INFO     | -- intersect: 4026500148.6432557
[2025-10-12 15:53:45] 2025-10-12 19:52:46,612 | INFO     | intersect: 4026500148.6432557
[2025-10-12 15:53:45] 2025-10-12 19:52:46,612 | INFO     | chi2: 2.2728895070896473
[2025-10-12 15:53:45] 2025-10-12 19:52:46,612 | INFO     | current chi2=2.2728895070896473 (change=22.904956220867017 %)
[2025-10-12 15:53:45] 2025-10-12 19:52:46,612 | INFO     | right removable region: 184
[2025-10-12 15:53:45] 2025-10-12 19:52:46,613 | INFO     | sum of square deviations: 1963142332.4000015
[2025-10-12 15:53:45] 2025-10-12 19:52:46,614 | INFO     | sum of deviations: -53332168579.99999
[2025-10-12 15:53:45] 2025-10-12 19:52:46,614 | INFO     | mean x: 1760293134.4
[2025-10-12 15:53:45] 2025-10-12 19:52:46,614 | INFO     | mean y: 2531592.2972972975
[2025-10-12 15:53:45] 2025-10-12 19:52:46,614 | INFO     | -- intersect: 47823949654.87145
[2025-10-12 15:53:45] 2025-10-12 19:52:46,614 | INFO     | intersect: 47823949654.87145
[2025-10-12 15:53:45] 2025-10-12 19:52:46,614 | INFO     | chi2: 1.1060628575670295
[2025-10-12 15:53:45] 2025-10-12 19:52:46,615 | INFO     | current chi2=1.1060628575670295 (change=62.48301373180665 %)
[2025-10-12 15:53:45] 2025-10-12 19:52:46,615 | INFO     | sum of square deviations: 1808207089.3944368
[2025-10-12 15:53:45] 2025-10-12 19:52:46,616 | INFO     | sum of deviations: -54352208897.28331
[2025-10-12 15:53:45] 2025-10-12 19:52:46,616 | INFO     | mean x: 1760293286.9055555
[2025-10-12 15:53:45] 2025-10-12 19:52:46,616 | INFO     | mean y: 2532519.9833333334
[2025-10-12 15:53:45] 2025-10-12 19:52:46,616 | INFO     | -- intersect: 52914518658.92595
[2025-10-12 15:53:45] 2025-10-12 19:52:46,616 | INFO     | intersect: 52914518658.92595
[2025-10-12 15:53:45] 2025-10-12 19:52:46,617 | INFO     | chi2: 1.0506299240225336
[2025-10-12 15:53:45] 2025-10-12 19:52:46,617 | INFO     | current chi2=1.0506299240225336 (change=5.011734474696119 %)
[2025-10-12 15:53:45] 2025-10-12 19:52:46,617 | INFO     | left removable region: 20
[2025-10-12 15:53:45] 2025-10-12 19:52:46,617 | INFO     | sum of square deviations: 1367591641.969508
[2025-10-12 15:53:45] 2025-10-12 19:52:46,618 | INFO     | sum of deviations: -26983750145.64632
[2025-10-12 15:53:45] 2025-10-12 19:52:46,618 | INFO     | mean x: 1760293408.9207318
[2025-10-12 15:53:45] 2025-10-12 19:52:46,618 | INFO     | mean y: 2528387.7195121953
[2025-10-12 15:53:45] 2025-10-12 19:52:46,618 | INFO     | -- intersect: 34734619511.74827
[2025-10-12 15:53:45] 2025-10-12 19:52:46,618 | INFO     | intersect: 34734619511.74827
[2025-10-12 15:53:45] 2025-10-12 19:52:46,619 | INFO     | chi2: 0.29838676375917855
[2025-10-12 15:53:45] 2025-10-12 19:52:46,619 | INFO     | -- intersect: 34734619511.74827
[2025-10-12 15:53:45] 2025-10-12 19:52:46,619 | INFO     | current memory leak: -19.73 B/s (using 164 data points, chi2=0.30)
[2025-10-12 15:53:45] 2025-10-12 19:52:46,620 | INFO     | could have reported an average CPU frequency of 2613 MHz (10 samples)
[2025-10-12 15:53:45] 2025-10-12 19:52:46,620 | INFO     | ..............................
[2025-10-12 15:53:45] 2025-10-12 19:52:46,620 | INFO     | . Timing measurements:
[2025-10-12 15:53:45] 2025-10-12 19:52:46,620 | INFO     | . get job = 0 s
[2025-10-12 15:53:45] 2025-10-12 19:52:46,620 | INFO     | . initial setup = 3 s
[2025-10-12 15:53:45] 2025-10-12 19:52:46,620 | INFO     | . payload setup = 13 s
[2025-10-12 15:53:45] 2025-10-12 19:52:46,620 | INFO     | . stage-in = 0 s
[2025-10-12 15:53:45] 2025-10-12 19:52:46,620 | INFO     | . payload execution = 11550 s
[2025-10-12 15:53:45] 2025-10-12 19:52:46,620 | INFO     | . stage-out = 2 s
[2025-10-12 15:53:45] 2025-10-12 19:52:46,620 | INFO     | . log creation = 0 s
[2025-10-12 15:53:45] 2025-10-12 19:52:46,621 | INFO     | ..............................
[2025-10-12 15:53:45] 2025-10-12 19:52:46,886 | INFO     | 
[2025-10-12 15:53:45] 2025-10-12 19:52:46,887 | INFO     | job summary report
[2025-10-12 15:53:45] 2025-10-12 19:52:46,887 | INFO     | --------------------------------------------------
[2025-10-12 15:53:45] 2025-10-12 19:52:46,887 | INFO     | PanDA job id: 6839242470
[2025-10-12 15:53:45] 2025-10-12 19:52:46,887 | INFO     | task id: 46676269
[2025-10-12 15:53:45] 2025-10-12 19:52:46,887 | INFO     | errors: (none)
[2025-10-12 15:53:45] 2025-10-12 19:52:46,887 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 15:53:45] 2025-10-12 19:52:46,887 | INFO     | pilot state: finished 
[2025-10-12 15:53:45] 2025-10-12 19:52:46,888 | INFO     | transexitcode: 0
[2025-10-12 15:53:45] 2025-10-12 19:52:46,888 | INFO     | exeerrorcode: 0
[2025-10-12 15:53:45] 2025-10-12 19:52:46,888 | INFO     | exeerrordiag: 
[2025-10-12 15:53:45] 2025-10-12 19:52:46,888 | INFO     | exitcode: 0
[2025-10-12 15:53:45] 2025-10-12 19:52:46,888 | INFO     | exitmsg: OK
[2025-10-12 15:53:45] 2025-10-12 19:52:46,888 | INFO     | cpuconsumptiontime: 47735 s
[2025-10-12 15:53:45] 2025-10-12 19:52:46,888 | INFO     | nevents: 400
[2025-10-12 15:53:45] 2025-10-12 19:52:46,888 | INFO     | neventsw: 0
[2025-10-12 15:53:45] 2025-10-12 19:52:46,888 | INFO     | pid: 3229662
[2025-10-12 15:53:45] 2025-10-12 19:52:46,888 | INFO     | pgrp: 3229662
[2025-10-12 15:53:45] 2025-10-12 19:52:46,888 | INFO     | corecount: 12
[2025-10-12 15:53:45] 2025-10-12 19:52:46,889 | INFO     | event service: False
[2025-10-12 15:53:45] 2025-10-12 19:52:46,889 | INFO     | sizes: {0: 2348856, 1: 2348856, 11: 2349146, 22: 2349174, 11568: 2378405, 11571: 2387403, 11573: 2387587, 11577: 2387781}
[2025-10-12 15:53:45] 2025-10-12 19:52:46,889 | INFO     | --------------------------------------------------
[2025-10-12 15:53:45] 2025-10-12 19:52:46,889 | INFO     | 
[2025-10-12 15:53:45] 2025-10-12 19:52:46,889 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 15:53:45] 2025-10-12 19:52:46,908 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 15:53:45] 2025-10-12 19:52:46,908 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 15:53:45] 2025-10-12 19:52:46,909 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 15:53:45] 2025-10-12 19:52:46,909 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 15:53:45] 2025-10-12 19:52:46,909 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 15:53:45] 2025-10-12 19:52:46,909 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 15:53:45] 2025-10-12 19:52:46,909 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 15:53:45] 2025-10-12 19:52:46,909 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 15:53:45] 2025-10-12 19:52:46,909 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 15:53:45] 2025-10-12 19:52:46,909 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 15:53:45] 2025-10-12 19:52:46,909 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 15:53:45] 2025-10-12 19:52:46,910 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 15:53:45] 2025-10-12 19:52:46,910 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 15:53:45] 2025-10-12 19:52:46,910 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 15:53:45] 2025-10-12 19:52:46,910 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 15:53:45] 2025-10-12 19:52:46,910 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 15:53:45] 2025-10-12 19:52:46,910 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 15:53:45] 2025-10-12 19:52:46,910 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 15:53:45] 2025-10-12 19:52:46,910 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 15:53:45] 2025-10-12 19:52:46,910 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 15:53:45] 2025-10-12 19:52:46,910 | INFO     | job 6839242470 has completed (purged errors)
[2025-10-12 15:53:45] 2025-10-12 19:52:46,911 | INFO     | overall cleanup function is called
[2025-10-12 15:53:45] 2025-10-12 19:52:47,919 | INFO     | --- collectZombieJob: --- 10, [3229662]
[2025-10-12 15:53:45] 2025-10-12 19:52:47,920 | INFO     | zombie collector waiting for pid 3229662
[2025-10-12 15:53:45] 2025-10-12 19:52:47,920 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 15:53:45] 2025-10-12 19:52:47,920 | INFO     | collected zombie processes
[2025-10-12 15:53:45] 2025-10-12 19:52:47,920 | INFO     | will attempt to kill all subprocesses of pid=3229662
[2025-10-12 15:53:45] 2025-10-12 19:52:48,270 | INFO     | process IDs to be killed: [3229662] (in reverse order)
[2025-10-12 15:53:45] 2025-10-12 19:52:48,376 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 15:53:45] 2025-10-12 19:52:48,377 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 15:53:45] 2025-10-12 19:52:48,389 | INFO     | did not find any defunct processes belonging to 3229662
[2025-10-12 15:53:45] 2025-10-12 19:52:48,402 | INFO     | did not find any defunct processes belonging to 3229662
[2025-10-12 15:53:45] 2025-10-12 19:52:48,402 | INFO     | ready for new job
[2025-10-12 15:53:45] 2025-10-12 19:52:48,402 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 15:53:45] 2025-10-12 19:52:48,404 | INFO     | ***************************************
[2025-10-12 15:53:45] 2025-10-12 19:52:48,404 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 15:53:45] 2025-10-12 19:52:48,405 | INFO     | ***************************************
[2025-10-12 15:53:45] 2025-10-12 19:52:48,405 | INFO     | 
[2025-10-12 15:53:45] 2025-10-12 19:52:48,418 | INFO     | architecture information:
[2025-10-12 15:53:45] 2025-10-12 19:52:48,419 | INFO     | executing command: cat /etc/os-release
[2025-10-12 15:53:45] 2025-10-12 19:52:48,434 | INFO     | cat /etc/os-release:
[2025-10-12 15:53:45] NAME="CentOS Linux"
[2025-10-12 15:53:45] VERSION="7 (Core)"
[2025-10-12 15:53:45] ID="centos"
[2025-10-12 15:53:45] ID_LIKE="rhel fedora"
[2025-10-12 15:53:45] VERSION_ID="7"
[2025-10-12 15:53:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 15:53:45] ANSI_COLOR="0;31"
[2025-10-12 15:53:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 15:53:45] HOME_URL="https://www.centos.org/"
[2025-10-12 15:53:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 15:53:45] 
[2025-10-12 15:53:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 15:53:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 15:53:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 15:53:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 15:53:45] 
[2025-10-12 15:53:45] 2025-10-12 19:52:48,434 | INFO     | ***************************************
[2025-10-12 15:53:45] 2025-10-12 19:52:48,937 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 15:53:45] 2025-10-12 19:52:48,954 | INFO     | sufficient remaining disk space (75876007936 B)
[2025-10-12 15:53:45] 2025-10-12 19:52:48,954 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 15:53:45] 2025-10-12 19:52:48,954 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 15:53:45] 2025-10-12 19:52:48,954 | INFO     | update_server=False
[2025-10-12 15:53:45] 2025-10-12 19:52:48,955 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 15:53:45] 2025-10-12 19:52:48,955 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 15:53:45] 2025-10-12 19:52:48,955 | INFO     | aborting loop
[2025-10-12 15:53:45] 2025-10-12 19:52:48,955 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 15:53:45] 2025-10-12 19:52:48,955 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 15:53:45] 2025-10-12 19:52:48,973 | INFO     | all payload control threads have been joined
[2025-10-12 15:53:45] 2025-10-12 19:52:49,580 | INFO     | all job control threads have been joined
[2025-10-12 15:53:45] 2025-10-12 19:52:49,684 | INFO     | all data control threads have been joined
[2025-10-12 15:53:45] 2025-10-12 19:52:49,959 | INFO     | [job] retrieve thread has finished
[2025-10-12 15:53:45] 2025-10-12 19:52:49,961 | INFO     | [job] job monitor thread has finished
[2025-10-12 15:53:45] 2025-10-12 19:52:49,978 | INFO     | [payload] control thread has finished
[2025-10-12 15:53:45] 2025-10-12 19:52:50,131 | INFO     | [payload] failed_post thread has finished
[2025-10-12 15:53:45] 2025-10-12 19:52:50,190 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 15:53:45] 2025-10-12 19:52:50,301 | INFO     | [job] validate thread has finished
[2025-10-12 15:53:45] 2025-10-12 19:52:50,349 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 15:53:45] 2025-10-12 19:52:50,505 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 15:53:45] 2025-10-12 19:52:50,585 | INFO     | [job] control thread has finished
[2025-10-12 15:53:45] 2025-10-12 19:52:50,689 | INFO     | [data] control thread has finished
[2025-10-12 15:53:45] 2025-10-12 19:52:50,960 | INFO     | [data] copytool_out thread has finished
[2025-10-12 15:53:45] 2025-10-12 19:52:51,088 | INFO     | [payload] validate_post thread has finished
[2025-10-12 15:53:45] 2025-10-12 19:52:51,126 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 15:53:45] 2025-10-12 19:52:51,373 | INFO     | [data] copytool_in thread has finished
[2025-10-12 15:53:45] 2025-10-12 19:52:51,735 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 15:53:45] 2025-10-12 19:52:52,740 | INFO     | [job] queue monitor thread has finished
[2025-10-12 15:53:45] 2025-10-12 19:52:52,962 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 15:53:45] 2025-10-12 19:53:18,809 | INFO     | PID=3208250 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 15:53:45] 2025-10-12 19:53:18,809 | INFO     | .. there are 31 such processes running
[2025-10-12 15:53:45] 2025-10-12 19:53:18,810 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 15:53:45] 2025-10-12 19:53:18,810 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 15:53:45] 2025-10-12 19:53:18,810 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 15:53:45] 2025-10-12 19:53:38,114 | INFO     | [monitor] cgroup control has ended
[2025-10-12 15:53:45] 2025-10-12 19:53:39,791 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140407680530240)>', '<ExcThread(monitor, started 140407329494784)>']
[2025-10-12 15:53:45] 2025-10-12 19:53:39,906 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 15:53:45] 2025-10-12 19:53:39,906 | INFO     | [monitor] control thread has ended
[2025-10-12 15:53:45] 2025-10-12 19:53:44,816 | INFO     | all workflow threads have been joined
[2025-10-12 15:53:45] 2025-10-12 19:53:44,816 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 15:53:45] 2025-10-12 19:53:44,817 | INFO     | traces error code: 0
[2025-10-12 15:53:45] 2025-10-12 19:53:44,817 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 15:53:45] 2025-10-12 19:53:44,973 [wrapper] ==== pilot stdout END ====
[2025-10-12 15:53:45] 2025-10-12 19:53:44,975 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 15:53:45] 2025-10-12 19:53:44,977 [wrapper] pilotpid: 3208250
[2025-10-12 15:53:45] 2025-10-12 19:53:44,979 [wrapper] Pilot exit status: 0
[2025-10-12 15:53:45] 2025-10-12 19:53:44,987 [wrapper] pandaids: 6839242470
[2025-10-12 15:53:45] 2025-10-12 19:53:45,033 [wrapper] cleanup supervisor_pilot 3821773 3208251
[2025-10-12 15:53:45] 2025-10-12 19:53:45,036 [wrapper] Test setup, not cleaning
[2025-10-12 15:53:45] 2025-10-12 19:53:45,039 [wrapper] apfmon messages muted
[2025-10-12 15:53:45] 2025-10-12 19:53:45,042 [wrapper] ==== wrapper stdout END ====
[2025-10-12 15:53:45] 2025-10-12 19:53:45,044 [wrapper] ==== wrapper stderr END ====
[2025-10-12 15:53:45]  *** Error codes and diagnostics ***
[2025-10-12 15:53:45]     "exeErrorCode": 0,
[2025-10-12 15:53:45]     "exeErrorDiag": "",
[2025-10-12 15:53:45]     "pilotErrorCode": 0,
[2025-10-12 15:53:45]     "pilotErrorDiag": "",
[2025-10-12 15:53:45]  *** Listing of results directory ***
[2025-10-12 15:53:45] total 412112
[2025-10-12 15:53:45] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 21:52 queuedata.json
[2025-10-12 15:53:45] -rwx------. 1 boincer umatlas     36292 Oct 11 21:53 runpilot2-wrapper.sh
[2025-10-12 15:53:45] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 21:53 pilot3.tar.gz
[2025-10-12 15:53:45] -rw-r--r--. 1 boincer umatlas       100 Oct 12 12:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 15:53:45] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 12:38 run_atlas
[2025-10-12 15:53:45] -rw-r--r--. 1 boincer umatlas       105 Oct 12 12:38 job.xml
[2025-10-12 15:53:45] -rw-r--r--. 2 boincer umatlas 219481618 Oct 12 12:38 EVNT.46676267._003169.pool.root.1
[2025-10-12 15:53:45] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 12:38 start_atlas.sh
[2025-10-12 15:53:45] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 12:38 shared
[2025-10-12 15:53:45] -rw-r--r--. 2 boincer umatlas    569677 Oct 12 12:38 input.tar.gz
[2025-10-12 15:53:45] -rw-r--r--. 1 boincer umatlas         0 Oct 12 12:38 boinc_lockfile
[2025-10-12 15:53:45] -rw-r--r--. 1 boincer umatlas      2549 Oct 12 12:38 pandaJob.out
[2025-10-12 15:53:45] -rw-------. 1 boincer umatlas    975528 Oct 12 12:39 agis_schedconf.cvmfs.json
[2025-10-12 15:53:45] drwx------. 5 boincer umatlas      4096 Oct 12 12:39 pilot3
[2025-10-12 15:53:45] -rw-r--r--. 1 boincer umatlas      6703 Oct 12 15:47 init_data.xml
[2025-10-12 15:53:45] -rw-------. 1 boincer umatlas 194732440 Oct 12 15:51 HITS.46676269._069005.pool.root.1
[2025-10-12 15:53:45] -rw-r--r--. 1 boincer umatlas       530 Oct 12 15:52 boinc_task_state.xml
[2025-10-12 15:53:45] -rw-------. 1 boincer umatlas      1042 Oct 12 15:52 memory_monitor_summary.json
[2025-10-12 15:53:45] -rw-------. 1 boincer umatlas   1560580 Oct 12 15:52 agis_ddmendpoints.agis.ALL.json
[2025-10-12 15:53:45] -rw-------. 1 boincer umatlas    475334 Oct 12 15:52 log.46676269._069005.job.log.tgz.1
[2025-10-12 15:53:45] -rw-------. 1 boincer umatlas      7836 Oct 12 15:52 heartbeat.json
[2025-10-12 15:53:45] -rw-------. 1 boincer umatlas        95 Oct 12 15:53 pilot_heartbeat.json
[2025-10-12 15:53:45] -rw-r--r--. 1 boincer umatlas        28 Oct 12 15:53 wrapper_checkpoint.txt
[2025-10-12 15:53:45] -rw-------. 1 boincer umatlas      4824 Oct 12 15:53 pilotlog.txt
[2025-10-12 15:53:45] -rw-------. 1 boincer umatlas   1462487 Oct 12 15:53 log.46676269._069005.job.log.1
[2025-10-12 15:53:45] -rw-------. 1 boincer umatlas       357 Oct 12 15:53 output.list
[2025-10-12 15:53:45] -rw-r--r--. 1 boincer umatlas       620 Oct 12 15:53 runtime_log
[2025-10-12 15:53:45] -rw-------. 1 boincer umatlas   1955840 Oct 12 15:53 result.tar.gz
[2025-10-12 15:53:45] -rw-r--r--. 1 boincer umatlas      8691 Oct 12 15:53 runtime_log.err
[2025-10-12 15:53:45] -rw-------. 1 boincer umatlas       654 Oct 12 15:53 qFWNDmMS0R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmzHiNDmrHN16n.diag
[2025-10-12 15:53:45] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 15:53 boinc_mmap_file
[2025-10-12 15:53:45] -rw-r--r--. 1 boincer umatlas     21205 Oct 12 15:53 stderr.txt
[2025-10-12 15:53:45] HITS file was successfully produced:
[2025-10-12 15:53:45] -rw-------. 1 boincer umatlas 194732440 Oct 12 15:51 shared/HITS.pool.root.1
[2025-10-12 15:53:45]  *** Contents of shared directory: ***
[2025-10-12 15:53:45] total 407008
[2025-10-12 15:53:45] -rw-r--r--. 2 boincer umatlas 219481618 Oct 12 12:38 ATLAS.root_0
[2025-10-12 15:53:45] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 12:38 start_atlas.sh
[2025-10-12 15:53:45] -rw-r--r--. 2 boincer umatlas    569677 Oct 12 12:38 input.tar.gz
[2025-10-12 15:53:45] -rw-------. 1 boincer umatlas 194732440 Oct 12 15:51 HITS.pool.root.1
[2025-10-12 15:53:45] -rw-------. 1 boincer umatlas   1955840 Oct 12 15:53 result.tar.gz
15:54:07 (3200568): run_atlas exited; CPU time 48063.020931
15:54:07 (3200568): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN