Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:07:39 (2917236): wrapper (7.7.26015): starting
00:07:39 (2917236): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 00:07:39] Arguments: --nthreads 12
[2025-10-12 00:07:39] Threads: 12
[2025-10-12 00:07:39] Checking for CVMFS
[2025-10-12 00:07:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 00:07:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 00:07:41] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 00:07:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 00:07:41] 2.13.2.0 2624825 128743 435324 151607 3 53 28266332 40960001 22002 16776704 0 182009333 99.656 168708267 30830 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 00:07:41] CVMFS is ok
[2025-10-12 00:07:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 00:07:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 00:07:41] Further information can be found at the LHC@home message board.
[2025-10-12 00:07:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 00:07:41] Checking for apptainer binary...
[2025-10-12 00:07:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 00:07:41] Running /usr/bin/apptainer --version
[2025-10-12 00:07:42] apptainer version 1.4.3-1.el9
[2025-10-12 00:07:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 00:07:43] c6-8-12-1.aglt2.org
[2025-10-12 00:07:43] apptainer works
[2025-10-12 00:07:43] Set ATHENA_PROC_NUMBER=12
[2025-10-12 00:07:43] Set ATHENA_CORE_NUMBER=12
[2025-10-12 00:07:43] Starting ATLAS job with PandaID=6839242268
[2025-10-12 00:07:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 06:29:01]  *** The last 200 lines of the pilot log: ***
[2025-10-12 06:29:01] 2025-10-12 10:28:21,422 | INFO     | intersect: -29419493872.840683
[2025-10-12 06:29:01] 2025-10-12 10:28:21,423 | INFO     | chi2: 5.403643690224833
[2025-10-12 06:29:01] 2025-10-12 10:28:21,423 | INFO     | current chi2=5.403643690224833 (change=0.056286868208746704 %)
[2025-10-12 06:29:01] 2025-10-12 10:28:21,423 | INFO     | right removable region: 363
[2025-10-12 06:29:01] 2025-10-12 10:28:21,423 | INFO     | sum of square deviations: 14954571496.074142
[2025-10-12 06:29:01] 2025-10-12 10:28:21,427 | INFO     | sum of deviations: 144212185824.12088
[2025-10-12 06:29:01] 2025-10-12 10:28:21,427 | INFO     | mean x: 1760253722.2719781
[2025-10-12 06:29:01] 2025-10-12 10:28:21,427 | INFO     | mean y: 2363289.10989011
[2025-10-12 06:29:01] 2025-10-12 10:28:21,427 | INFO     | -- intersect: -16972381654.971416
[2025-10-12 06:29:01] 2025-10-12 10:28:21,427 | INFO     | intersect: -16972381654.971416
[2025-10-12 06:29:01] 2025-10-12 10:28:21,429 | INFO     | chi2: 1.7436725219903022
[2025-10-12 06:29:01] 2025-10-12 10:28:21,429 | INFO     | current chi2=1.7436725219903022 (change=67.74970439874897 %)
[2025-10-12 06:29:01] 2025-10-12 10:28:21,430 | INFO     | sum of square deviations: 14346663915.615574
[2025-10-12 06:29:01] 2025-10-12 10:28:21,433 | INFO     | sum of deviations: 83593600099.70752
[2025-10-12 06:29:01] 2025-10-12 10:28:21,433 | INFO     | mean x: 1760253874.7799442
[2025-10-12 06:29:01] 2025-10-12 10:28:21,433 | INFO     | mean y: 2378485.376044568
[2025-10-12 06:29:01] 2025-10-12 10:28:21,433 | INFO     | -- intersect: -10254079695.271431
[2025-10-12 06:29:01] 2025-10-12 10:28:21,434 | INFO     | intersect: -10254079695.271431
[2025-10-12 06:29:01] 2025-10-12 10:28:21,434 | INFO     | chi2: 0.6991557271893621
[2025-10-12 06:29:01] 2025-10-12 10:28:21,435 | INFO     | current chi2=0.6991557271893621 (change=59.903266331724026 %)
[2025-10-12 06:29:01] 2025-10-12 10:28:21,435 | INFO     | sum of square deviations: 13755432545.031036
[2025-10-12 06:29:01] 2025-10-12 10:28:21,440 | INFO     | sum of deviations: 47763505654.81918
[2025-10-12 06:29:01] 2025-10-12 10:28:21,441 | INFO     | mean x: 1760254027.2909606
[2025-10-12 06:29:01] 2025-10-12 10:28:21,441 | INFO     | mean y: 2387711.9435028248
[2025-10-12 06:29:01] 2025-10-12 10:28:21,441 | INFO     | -- intersect: -6109808535.698402
[2025-10-12 06:29:01] 2025-10-12 10:28:21,441 | INFO     | intersect: -6109808535.698402
[2025-10-12 06:29:01] 2025-10-12 10:28:21,441 | INFO     | chi2: 0.3203417760554119
[2025-10-12 06:29:01] 2025-10-12 10:28:21,441 | INFO     | current chi2=0.3203417760554119 (change=54.18162741179273 %)
[2025-10-12 06:29:01] 2025-10-12 10:28:21,442 | INFO     | sum of square deviations: 13180795658.88252
[2025-10-12 06:29:01] 2025-10-12 10:28:21,446 | INFO     | sum of deviations: 22799138596.65329
[2025-10-12 06:29:01] 2025-10-12 10:28:21,446 | INFO     | mean x: 1760254179.7851002
[2025-10-12 06:29:01] 2025-10-12 10:28:21,446 | INFO     | mean y: 2394326.048710602
[2025-10-12 06:29:01] 2025-10-12 10:28:21,446 | INFO     | -- intersect: -3042359575.6790404
[2025-10-12 06:29:01] 2025-10-12 10:28:21,446 | INFO     | intersect: -3042359575.6790404
[2025-10-12 06:29:01] 2025-10-12 10:28:21,447 | INFO     | chi2: 0.1212772718635878
[2025-10-12 06:29:01] 2025-10-12 10:28:21,447 | INFO     | current chi2=0.1212772718635878 (change=62.14128754701992 %)
[2025-10-12 06:29:01] 2025-10-12 10:28:21,447 | INFO     | sum of square deviations: 12622328274.508762
[2025-10-12 06:29:01] 2025-10-12 10:28:21,451 | INFO     | sum of deviations: 20759553475.61045
[2025-10-12 06:29:01] 2025-10-12 10:28:21,451 | INFO     | mean x: 1760254332.2877908
[2025-10-12 06:29:01] 2025-10-12 10:28:21,451 | INFO     | mean y: 2394875.145348837
[2025-10-12 06:29:01] 2025-10-12 10:28:21,451 | INFO     | -- intersect: -2892641060.1504717
[2025-10-12 06:29:01] 2025-10-12 10:28:21,451 | INFO     | intersect: -2892641060.1504717
[2025-10-12 06:29:01] 2025-10-12 10:28:21,452 | INFO     | chi2: 0.11595764332727722
[2025-10-12 06:29:01] 2025-10-12 10:28:21,452 | INFO     | current chi2=0.11595764332727722 (change=4.386335918154626 %)
[2025-10-12 06:29:01] 2025-10-12 10:28:21,452 | INFO     | left removable region: 50
[2025-10-12 06:29:01] 2025-10-12 10:28:21,452 | INFO     | sum of square deviations: 9508082621.878658
[2025-10-12 06:29:01] 2025-10-12 10:28:21,455 | INFO     | sum of deviations: 27788533104.57189
[2025-10-12 06:29:01] 2025-10-12 10:28:21,455 | INFO     | mean x: 1760254911.8115015
[2025-10-12 06:29:01] 2025-10-12 10:28:21,455 | INFO     | mean y: 2392676.230031949
[2025-10-12 06:29:01] 2025-10-12 10:28:21,455 | INFO     | -- intersect: -5142167361.227269
[2025-10-12 06:29:01] 2025-10-12 10:28:21,455 | INFO     | intersect: -5142167361.227269
[2025-10-12 06:29:01] 2025-10-12 10:28:21,456 | INFO     | chi2: 0.09753852463059405
[2025-10-12 06:29:01] 2025-10-12 10:28:21,456 | INFO     | -- intersect: -5142167361.227269
[2025-10-12 06:29:01] 2025-10-12 10:28:21,456 | INFO     | current memory leak: 2.92 B/s (using 313 data points, chi2=0.10)
[2025-10-12 06:29:01] 2025-10-12 10:28:21,457 | INFO     | could have reported an average CPU frequency of 2704 MHz (16 samples)
[2025-10-12 06:29:01] 2025-10-12 10:28:21,457 | INFO     | ..............................
[2025-10-12 06:29:01] 2025-10-12 10:28:21,457 | INFO     | . Timing measurements:
[2025-10-12 06:29:01] 2025-10-12 10:28:21,457 | INFO     | . get job = 0 s
[2025-10-12 06:29:01] 2025-10-12 10:28:21,457 | INFO     | . initial setup = 6 s
[2025-10-12 06:29:01] 2025-10-12 10:28:21,457 | INFO     | . payload setup = 58 s
[2025-10-12 06:29:01] 2025-10-12 10:28:21,457 | INFO     | . stage-in = 0 s
[2025-10-12 06:29:01] 2025-10-12 10:28:21,457 | INFO     | . payload execution = 22549 s
[2025-10-12 06:29:01] 2025-10-12 10:28:21,458 | INFO     | . stage-out = 3 s
[2025-10-12 06:29:01] 2025-10-12 10:28:21,458 | INFO     | . log creation = 0 s
[2025-10-12 06:29:01] 2025-10-12 10:28:21,458 | INFO     | ..............................
[2025-10-12 06:29:01] 2025-10-12 10:28:21,864 | INFO     | 
[2025-10-12 06:29:01] 2025-10-12 10:28:21,864 | INFO     | job summary report
[2025-10-12 06:29:01] 2025-10-12 10:28:21,864 | INFO     | --------------------------------------------------
[2025-10-12 06:29:01] 2025-10-12 10:28:21,865 | INFO     | PanDA job id: 6839242268
[2025-10-12 06:29:01] 2025-10-12 10:28:21,865 | INFO     | task id: 46676269
[2025-10-12 06:29:01] 2025-10-12 10:28:21,865 | INFO     | errors: (none)
[2025-10-12 06:29:01] 2025-10-12 10:28:21,865 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 06:29:01] 2025-10-12 10:28:21,865 | INFO     | pilot state: finished 
[2025-10-12 06:29:01] 2025-10-12 10:28:21,865 | INFO     | transexitcode: 0
[2025-10-12 06:29:01] 2025-10-12 10:28:21,865 | INFO     | exeerrorcode: 0
[2025-10-12 06:29:01] 2025-10-12 10:28:21,865 | INFO     | exeerrordiag: 
[2025-10-12 06:29:01] 2025-10-12 10:28:21,865 | INFO     | exitcode: 0
[2025-10-12 06:29:01] 2025-10-12 10:28:21,865 | INFO     | exitmsg: OK
[2025-10-12 06:29:01] 2025-10-12 10:28:21,865 | INFO     | cpuconsumptiontime: 45537 s
[2025-10-12 06:29:01] 2025-10-12 10:28:21,865 | INFO     | nevents: 400
[2025-10-12 06:29:01] 2025-10-12 10:28:21,865 | INFO     | neventsw: 0
[2025-10-12 06:29:01] 2025-10-12 10:28:21,865 | INFO     | pid: 2937694
[2025-10-12 06:29:01] 2025-10-12 10:28:21,865 | INFO     | pgrp: 2937694
[2025-10-12 06:29:01] 2025-10-12 10:28:21,865 | INFO     | corecount: 12
[2025-10-12 06:29:01] 2025-10-12 10:28:21,866 | INFO     | event service: False
[2025-10-12 06:29:01] 2025-10-12 10:28:21,866 | INFO     | sizes: {0: 2348029, 1: 2348630, 2: 2348742, 3: 2348941, 4: 2348941, 15: 2348969, 26: 2349125, 38: 2349153, 43: 2349443, 49: 2349471, 22612: 2383769, 22613: 2384048
[2025-10-12 06:29:01] 2025-10-12 10:28:21,866 | INFO     | --------------------------------------------------
[2025-10-12 06:29:01] 2025-10-12 10:28:21,866 | INFO     | 
[2025-10-12 06:29:01] 2025-10-12 10:28:21,866 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-12 06:29:01] 2025-10-12 10:28:21,939 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 06:29:01] 2025-10-12 10:28:21,939 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 06:29:01] 2025-10-12 10:28:21,939 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 06:29:01] 2025-10-12 10:28:21,939 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 06:29:01] 2025-10-12 10:28:21,939 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 06:29:01] 2025-10-12 10:28:21,940 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 06:29:01] 2025-10-12 10:28:21,940 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 06:29:01] 2025-10-12 10:28:21,940 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 06:29:01] 2025-10-12 10:28:21,940 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 06:29:01] 2025-10-12 10:28:21,940 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 06:29:01] 2025-10-12 10:28:21,940 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 06:29:01] 2025-10-12 10:28:21,940 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 06:29:01] 2025-10-12 10:28:21,940 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 06:29:01] 2025-10-12 10:28:21,940 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 06:29:01] 2025-10-12 10:28:21,940 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 06:29:01] 2025-10-12 10:28:21,940 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 06:29:01] 2025-10-12 10:28:21,940 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 06:29:01] 2025-10-12 10:28:21,940 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 06:29:01] 2025-10-12 10:28:21,941 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 06:29:01] 2025-10-12 10:28:21,941 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 06:29:01] 2025-10-12 10:28:21,941 | INFO     | job 6839242268 has completed (purged errors)
[2025-10-12 06:29:01] 2025-10-12 10:28:21,941 | INFO     | overall cleanup function is called
[2025-10-12 06:29:01] 2025-10-12 10:28:22,954 | INFO     | --- collectZombieJob: --- 10, [2937694]
[2025-10-12 06:29:01] 2025-10-12 10:28:22,955 | INFO     | zombie collector waiting for pid 2937694
[2025-10-12 06:29:01] 2025-10-12 10:28:22,955 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 06:29:01] 2025-10-12 10:28:22,955 | INFO     | collected zombie processes
[2025-10-12 06:29:01] 2025-10-12 10:28:22,955 | INFO     | will attempt to kill all subprocesses of pid=2937694
[2025-10-12 06:29:01] 2025-10-12 10:28:23,660 | INFO     | process IDs to be killed: [2937694] (in reverse order)
[2025-10-12 06:29:01] 2025-10-12 10:28:23,884 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 06:29:01] 2025-10-12 10:28:23,884 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 06:29:01] 2025-10-12 10:28:23,914 | INFO     | did not find any defunct processes belonging to 2937694
[2025-10-12 06:29:01] 2025-10-12 10:28:23,946 | INFO     | did not find any defunct processes belonging to 2937694
[2025-10-12 06:29:01] 2025-10-12 10:28:23,946 | INFO     | ready for new job
[2025-10-12 06:29:01] 2025-10-12 10:28:23,947 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 06:29:01] 2025-10-12 10:28:23,953 | INFO     | ***************************************
[2025-10-12 06:29:01] 2025-10-12 10:28:23,955 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 06:29:01] 2025-10-12 10:28:23,955 | INFO     | ***************************************
[2025-10-12 06:29:01] 2025-10-12 10:28:23,955 | INFO     | 
[2025-10-12 06:29:01] 2025-10-12 10:28:23,966 | INFO     | architecture information:
[2025-10-12 06:29:01] 2025-10-12 10:28:23,973 | INFO     | executing command: cat /etc/os-release
[2025-10-12 06:29:01] 2025-10-12 10:28:24,062 | INFO     | cat /etc/os-release:
[2025-10-12 06:29:01] NAME="CentOS Linux"
[2025-10-12 06:29:01] VERSION="7 (Core)"
[2025-10-12 06:29:01] ID="centos"
[2025-10-12 06:29:01] ID_LIKE="rhel fedora"
[2025-10-12 06:29:01] VERSION_ID="7"
[2025-10-12 06:29:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 06:29:01] ANSI_COLOR="0;31"
[2025-10-12 06:29:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 06:29:01] HOME_URL="https://www.centos.org/"
[2025-10-12 06:29:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 06:29:01] 
[2025-10-12 06:29:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 06:29:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 06:29:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 06:29:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 06:29:01] 
[2025-10-12 06:29:01] 2025-10-12 10:28:24,062 | INFO     | ***************************************
[2025-10-12 06:29:01] 2025-10-12 10:28:24,567 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-12 06:29:01] 2025-10-12 10:28:24,622 | INFO     | sufficient remaining disk space (56893636608 B)
[2025-10-12 06:29:01] 2025-10-12 10:28:24,622 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 06:29:01] 2025-10-12 10:28:24,622 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 06:29:01] 2025-10-12 10:28:24,623 | INFO     | update_server=False
[2025-10-12 06:29:01] 2025-10-12 10:28:24,623 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 06:29:01] 2025-10-12 10:28:24,623 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 06:29:01] 2025-10-12 10:28:24,626 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 06:29:01] 2025-10-12 10:28:24,627 | INFO     | aborting loop
[2025-10-12 06:29:01] 2025-10-12 10:28:24,688 | INFO     | all data control threads have been joined
[2025-10-12 06:29:01] 2025-10-12 10:28:25,079 | INFO     | all job control threads have been joined
[2025-10-12 06:29:01] 2025-10-12 10:28:25,096 | INFO     | all payload control threads have been joined
[2025-10-12 06:29:01] 2025-10-12 10:28:25,633 | INFO     | [job] retrieve thread has finished
[2025-10-12 06:29:01] 2025-10-12 10:28:25,646 | INFO     | [job] job monitor thread has finished
[2025-10-12 06:29:01] 2025-10-12 10:28:25,695 | INFO     | [data] control thread has finished
[2025-10-12 06:29:01] 2025-10-12 10:28:25,737 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 06:29:01] 2025-10-12 10:28:25,770 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 06:29:01] 2025-10-12 10:28:26,086 | INFO     | [job] control thread has finished
[2025-10-12 06:29:01] 2025-10-12 10:28:26,090 | INFO     | [data] copytool_in thread has finished
[2025-10-12 06:29:01] 2025-10-12 10:28:26,103 | INFO     | [payload] control thread has finished
[2025-10-12 06:29:01] 2025-10-12 10:28:26,147 | INFO     | [payload] validate_post thread has finished
[2025-10-12 06:29:01] 2025-10-12 10:28:26,186 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 06:29:01] 2025-10-12 10:28:26,412 | INFO     | [payload] failed_post thread has finished
[2025-10-12 06:29:01] 2025-10-12 10:28:26,448 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 06:29:01] 2025-10-12 10:28:26,464 | INFO     | [job] validate thread has finished
[2025-10-12 06:29:01] 2025-10-12 10:28:26,584 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 06:29:01] 2025-10-12 10:28:26,639 | INFO     | [data] copytool_out thread has finished
[2025-10-12 06:29:01] 2025-10-12 10:28:26,779 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 06:29:01] 2025-10-12 10:28:27,607 | INFO     | [job] queue monitor thread has finished
[2025-10-12 06:29:01] 2025-10-12 10:28:29,746 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 06:29:01] 2025-10-12 10:28:54,446 | INFO     | PID=2922896 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 06:29:01] 2025-10-12 10:28:54,446 | INFO     | .. there are 32 such processes running
[2025-10-12 06:29:01] 2025-10-12 10:28:54,447 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 06:29:01] 2025-10-12 10:28:54,448 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 06:29:01] 2025-10-12 10:28:54,448 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 06:29:01] 2025-10-12 10:28:54,727 | INFO     | [monitor] cgroup control has ended
[2025-10-12 06:29:01] 2025-10-12 10:28:54,913 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140562379118400)>', '<ExcThread(monitor, started 140561654736640)>']
[2025-10-12 06:29:01] 2025-10-12 10:28:55,453 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 06:29:01] 2025-10-12 10:28:55,454 | INFO     | [monitor] control thread has ended
[2025-10-12 06:29:01] 2025-10-12 10:28:59,949 | INFO     | all workflow threads have been joined
[2025-10-12 06:29:01] 2025-10-12 10:28:59,950 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 06:29:01] 2025-10-12 10:28:59,950 | INFO     | traces error code: 0
[2025-10-12 06:29:01] 2025-10-12 10:28:59,950 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 06:29:01] 2025-10-12 10:29:00,467 [wrapper] ==== pilot stdout END ====
[2025-10-12 06:29:01] 2025-10-12 10:29:00,486 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 06:29:01] 2025-10-12 10:29:00,505 [wrapper] pilotpid: 2922896
[2025-10-12 06:29:01] 2025-10-12 10:29:00,520 [wrapper] Pilot exit status: 0
[2025-10-12 06:29:01] 2025-10-12 10:29:00,601 [wrapper] pandaids: 6839242268
[2025-10-12 06:29:01] 2025-10-12 10:29:01,002 [wrapper] cleanup supervisor_pilot 4102842 2922897
[2025-10-12 06:29:01] 2025-10-12 10:29:01,029 [wrapper] Test setup, not cleaning
[2025-10-12 06:29:01] 2025-10-12 10:29:01,051 [wrapper] apfmon messages muted
[2025-10-12 06:29:01] 2025-10-12 10:29:01,060 [wrapper] ==== wrapper stdout END ====
[2025-10-12 06:29:01] 2025-10-12 10:29:01,090 [wrapper] ==== wrapper stderr END ====
[2025-10-12 06:29:01]  *** Error codes and diagnostics ***
[2025-10-12 06:29:01]     "exeErrorCode": 0,
[2025-10-12 06:29:01]     "exeErrorDiag": "",
[2025-10-12 06:29:01]     "pilotErrorCode": 0,
[2025-10-12 06:29:01]     "pilotErrorDiag": "",
[2025-10-12 06:29:01]  *** Listing of results directory ***
[2025-10-12 06:29:01] total 423636
[2025-10-12 06:29:01] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 21:26 pilot3.tar.gz
[2025-10-12 06:29:01] -rwx------. 1 boincer umatlas     36292 Oct 11 21:50 runpilot2-wrapper.sh
[2025-10-12 06:29:01] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 21:50 queuedata.json
[2025-10-12 06:29:01] -rw-r--r--. 1 boincer umatlas       100 Oct 12 00:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 06:29:01] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 00:07 run_atlas
[2025-10-12 06:29:01] -rw-r--r--. 1 boincer umatlas       105 Oct 12 00:07 job.xml
[2025-10-12 06:29:01] -rw-r--r--. 2 boincer umatlas 223445868 Oct 12 00:07 EVNT.46676267._003164.pool.root.1
[2025-10-12 06:29:01] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:07 start_atlas.sh
[2025-10-12 06:29:01] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 00:07 shared
[2025-10-12 06:29:01] -rw-r--r--. 2 boincer umatlas    569675 Oct 12 00:07 input.tar.gz
[2025-10-12 06:29:01] -rw-r--r--. 1 boincer umatlas         0 Oct 12 00:07 boinc_lockfile
[2025-10-12 06:29:01] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 00:07 pandaJob.out
[2025-10-12 06:29:01] -rw-------. 1 boincer umatlas    975512 Oct 12 00:09 agis_schedconf.cvmfs.json
[2025-10-12 06:29:01] drwx------. 5 boincer umatlas      4096 Oct 12 00:09 pilot3
[2025-10-12 06:29:01] -rw-r--r--. 1 boincer umatlas      6841 Oct 12 06:19 init_data.xml
[2025-10-12 06:29:01] -rw-------. 1 boincer umatlas 199934896 Oct 12 06:26 HITS.46676269._068912.pool.root.1
[2025-10-12 06:29:01] -rw-r--r--. 1 boincer umatlas       530 Oct 12 06:26 boinc_task_state.xml
[2025-10-12 06:29:01] -rw-------. 1 boincer umatlas      1041 Oct 12 06:27 memory_monitor_summary.json
[2025-10-12 06:29:01] -rw-------. 1 boincer umatlas   1560580 Oct 12 06:27 agis_ddmendpoints.agis.ALL.json
[2025-10-12 06:29:01] -rw-------. 1 boincer umatlas    618500 Oct 12 06:27 log.46676269._068912.job.log.tgz.1
[2025-10-12 06:29:01] -rw-------. 1 boincer umatlas      7828 Oct 12 06:28 heartbeat.json
[2025-10-12 06:29:01] -rw-------. 1 boincer umatlas        95 Oct 12 06:28 pilot_heartbeat.json
[2025-10-12 06:29:01] -rw-------. 1 boincer umatlas      4824 Oct 12 06:28 pilotlog.txt
[2025-10-12 06:29:01] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 06:29 boinc_mmap_file
[2025-10-12 06:29:01] -rw-r--r--. 1 boincer umatlas        27 Oct 12 06:29 wrapper_checkpoint.txt
[2025-10-12 06:29:01] -rw-------. 1 boincer umatlas   2639796 Oct 12 06:29 log.46676269._068912.job.log.1
[2025-10-12 06:29:01] -rw-------. 1 boincer umatlas       357 Oct 12 06:29 output.list
[2025-10-12 06:29:01] -rw-r--r--. 1 boincer umatlas       620 Oct 12 06:29 runtime_log
[2025-10-12 06:29:01] -rw-------. 1 boincer umatlas   3276800 Oct 12 06:29 result.tar.gz
[2025-10-12 06:29:01] -rw-r--r--. 1 boincer umatlas      8711 Oct 12 06:29 runtime_log.err
[2025-10-12 06:29:01] -rw-------. 1 boincer umatlas       660 Oct 12 06:29 6mnMDmRP0R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmJHiNDmmkjGom.diag
[2025-10-12 06:29:01] -rw-r--r--. 1 boincer umatlas     21076 Oct 12 06:29 stderr.txt
[2025-10-12 06:29:01] HITS file was successfully produced:
[2025-10-12 06:29:01] -rw-------. 1 boincer umatlas 199934896 Oct 12 06:26 shared/HITS.pool.root.1
[2025-10-12 06:29:01]  *** Contents of shared directory: ***
[2025-10-12 06:29:01] total 417244
[2025-10-12 06:29:01] -rw-r--r--. 2 boincer umatlas 223445868 Oct 12 00:07 ATLAS.root_0
[2025-10-12 06:29:01] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:07 start_atlas.sh
[2025-10-12 06:29:01] -rw-r--r--. 2 boincer umatlas    569675 Oct 12 00:07 input.tar.gz
[2025-10-12 06:29:01] -rw-------. 1 boincer umatlas 199934896 Oct 12 06:26 HITS.pool.root.1
[2025-10-12 06:29:01] -rw-------. 1 boincer umatlas   3276800 Oct 12 06:29 result.tar.gz
06:29:02 (2917236): run_atlas exited; CPU time 46189.055314
06:29:02 (2917236): called boinc_finish(0)

</stderr_txt>
]]>

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