Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:04:00 (161286): wrapper (7.7.26015): starting
00:04:00 (161286): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 00:04:00] Arguments: --nthreads 12
[2025-10-12 00:04:00] Threads: 12
[2025-10-12 00:04:00] Checking for CVMFS
[2025-10-12 00:04:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 00:04:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 00:04:00] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 00:04:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 00:04:00] 2.13.2.0 5270 5175 107528 151606 2 517 37707416 40960001 20961 16776704 0 15301820 99.801 6292153 29173 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 00:04:00] CVMFS is ok
[2025-10-12 00:04:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 00:04:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 00:04:00] Further information can be found at the LHC@home message board.
[2025-10-12 00:04:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 00:04:00] Checking for apptainer binary...
[2025-10-12 00:04:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 00:04:00] Running /usr/bin/apptainer --version
[2025-10-12 00:04:00] apptainer version 1.4.3-1.el9
[2025-10-12 00:04:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 00:04:01] c-212-8.aglt2.org
[2025-10-12 00:04:01] apptainer works
[2025-10-12 00:04:01] Set ATHENA_PROC_NUMBER=12
[2025-10-12 00:04:01] Set ATHENA_CORE_NUMBER=12
[2025-10-12 00:04:01] Starting ATLAS job with PandaID=6839242281
[2025-10-12 00:04:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 01:18:48]  *** The last 200 lines of the pilot log: ***
[2025-10-12 01:18:48] 2025-10-12 05:17:58,795 | INFO     | summary of transferred files:
[2025-10-12 01:18:48] 2025-10-12 05:17:58,795 | INFO     |  -- lfn=log.46676269._068925.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 01:18:48] 2025-10-12 05:17:58,795 | INFO     | stage-out finished correctly
[2025-10-12 01:18:48] 2025-10-12 05:17:59,209 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 01:18:48] 2025-10-12 05:17:59,235 | INFO     | time since job start (4422s) is within the limit (172800.0s)
[2025-10-12 01:18:48] 2025-10-12 05:17:59,723 | INFO     | monitor loop #293: job 0:6839242281 is in state 'finished'
[2025-10-12 01:18:48] 2025-10-12 05:17:59,724 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 01:18:48] 2025-10-12 05:18:00,730 | INFO     | job 6839242281 has state=finished
[2025-10-12 01:18:48] 2025-10-12 05:18:00,734 | INFO     | preparing for final server update for job 6839242281 in state='finished'
[2025-10-12 01:18:48] 2025-10-12 05:18:00,759 | INFO     | this job has now completed (state=finished)
[2025-10-12 01:18:48] 2025-10-12 05:18:00,759 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 01:18:48] 2025-10-12 05:18:00,760 | INFO     | log transfer has been attempted: DONE
[2025-10-12 01:18:48] 2025-10-12 05:18:00,760 | INFO     | job 6839242281 has finished - writing final server update
[2025-10-12 01:18:48] 2025-10-12 05:18:00,760 | INFO     | total number of processed events: 400 (read)
[2025-10-12 01:18:48] 2025-10-12 05:18:00,778 | INFO     | executing command: lscpu
[2025-10-12 01:18:48] 2025-10-12 05:18:00,919 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 01:18:48] 2025-10-12 05:18:01,241 | INFO     | time since job start (4424s) is within the limit (172800.0s)
[2025-10-12 01:18:48] 2025-10-12 05:18:02,229 | INFO     | monitor loop #294: job 0:6839242281 is in state 'finished'
[2025-10-12 01:18:48] 2025-10-12 05:18:02,230 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 01:18:48] 2025-10-12 05:18:03,249 | INFO     | time since job start (4426s) is within the limit (172800.0s)
[2025-10-12 01:18:48] 2025-10-12 05:18:04,737 | INFO     | monitor loop #295: job 0:6839242281 is in state 'finished'
[2025-10-12 01:18:48] 2025-10-12 05:18:04,738 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 01:18:48] 2025-10-12 05:18:05,258 | INFO     | time since job start (4428s) is within the limit (172800.0s)
[2025-10-12 01:18:48] 2025-10-12 05:18:07,250 | INFO     | monitor loop #296: job 0:6839242281 is in state 'finished'
[2025-10-12 01:18:48] 2025-10-12 05:18:07,251 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 01:18:48] 2025-10-12 05:18:07,265 | INFO     | time since job start (4430s) is within the limit (172800.0s)
[2025-10-12 01:18:48] 2025-10-12 05:18:09,555 | INFO     | PID=170271 has CPU usage=11.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 01:18:48] 2025-10-12 05:18:09,558 | INFO     | .. there are 18 such processes running
[2025-10-12 01:18:48] 2025-10-12 05:18:09,755 | INFO     | monitor loop #297: job 0:6839242281 is in state 'finished'
[2025-10-12 01:18:48] 2025-10-12 05:18:09,756 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 01:18:48] 2025-10-12 05:18:10,560 | INFO     | time since job start (4433s) is within the limit (172800.0s)
[2025-10-12 01:18:48] 2025-10-12 05:18:12,262 | INFO     | monitor loop #298: job 0:6839242281 is in state 'finished'
[2025-10-12 01:18:48] 2025-10-12 05:18:12,262 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 01:18:48] 2025-10-12 05:18:12,570 | INFO     | time since job start (4435s) is within the limit (172800.0s)
[2025-10-12 01:18:48] 2025-10-12 05:18:13,831 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 01:18:48] 2025-10-12 05:18:13,852 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2978.81521875
[2025-10-12 01:18:48] 2025-10-12 05:18:13,867 | INFO     | using path: /tmp/boinchome/slots/7/PanDA_Pilot-6839242281/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 01:18:48] 2025-10-12 05:18:13,868 | INFO     | extracted standard info from prmon json
[2025-10-12 01:18:48] 2025-10-12 05:18:13,869 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 01:18:48] 2025-10-12 05:18:13,869 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 01:18:48] 2025-10-12 05:18:13,879 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 01:18:48] 2025-10-12 05:18:13,879 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 01:18:48] 2025-10-12 05:18:13,880 | INFO     | fitting pss+swap vs Time
[2025-10-12 01:18:48] 2025-10-12 05:18:13,881 | INFO     | sum of square deviations: 85149415.75384612
[2025-10-12 01:18:48] 2025-10-12 05:18:13,881 | INFO     | sum of deviations: 811324326.0923076
[2025-10-12 01:18:48] 2025-10-12 05:18:13,881 | INFO     | mean x: 1760244151.0615385
[2025-10-12 01:18:48] 2025-10-12 05:18:13,881 | INFO     | mean y: 2670941.476923077
[2025-10-12 01:18:48] 2025-10-12 05:18:13,881 | INFO     | -- intersect: -16769363099.795069
[2025-10-12 01:18:48] 2025-10-12 05:18:13,881 | INFO     | intersect: -16769363099.795069
[2025-10-12 01:18:48] 2025-10-12 05:18:13,882 | INFO     | chi2: 0.0006273422683347584
[2025-10-12 01:18:48] 2025-10-12 05:18:13,882 | INFO     | -- intersect: -16769363099.795069
[2025-10-12 01:18:48] 2025-10-12 05:18:13,882 | INFO     | current memory leak: 9.53 B/s (using 65 data points, chi2=0.00)
[2025-10-12 01:18:48] 2025-10-12 05:18:13,882 | INFO     | could have reported an average CPU frequency of 2953 MHz (6 samples)
[2025-10-12 01:18:48] 2025-10-12 05:18:13,882 | INFO     | ..............................
[2025-10-12 01:18:48] 2025-10-12 05:18:13,882 | INFO     | . Timing measurements:
[2025-10-12 01:18:48] 2025-10-12 05:18:13,883 | INFO     | . get job = 0 s
[2025-10-12 01:18:48] 2025-10-12 05:18:13,883 | INFO     | . initial setup = 2 s
[2025-10-12 01:18:48] 2025-10-12 05:18:13,883 | INFO     | . payload setup = 8 s
[2025-10-12 01:18:48] 2025-10-12 05:18:13,883 | INFO     | . stage-in = 0 s
[2025-10-12 01:18:48] 2025-10-12 05:18:13,883 | INFO     | . payload execution = 4388 s
[2025-10-12 01:18:48] 2025-10-12 05:18:13,883 | INFO     | . stage-out = 1 s
[2025-10-12 01:18:48] 2025-10-12 05:18:13,883 | INFO     | . log creation = 0 s
[2025-10-12 01:18:48] 2025-10-12 05:18:13,883 | INFO     | ..............................
[2025-10-12 01:18:48] 2025-10-12 05:18:13,965 | INFO     | 
[2025-10-12 01:18:48] 2025-10-12 05:18:13,966 | INFO     | job summary report
[2025-10-12 01:18:48] 2025-10-12 05:18:13,966 | INFO     | --------------------------------------------------
[2025-10-12 01:18:48] 2025-10-12 05:18:13,966 | INFO     | PanDA job id: 6839242281
[2025-10-12 01:18:48] 2025-10-12 05:18:13,966 | INFO     | task id: 46676269
[2025-10-12 01:18:48] 2025-10-12 05:18:13,967 | INFO     | errors: (none)
[2025-10-12 01:18:48] 2025-10-12 05:18:13,967 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 01:18:48] 2025-10-12 05:18:13,967 | INFO     | pilot state: finished 
[2025-10-12 01:18:48] 2025-10-12 05:18:13,967 | INFO     | transexitcode: 0
[2025-10-12 01:18:48] 2025-10-12 05:18:13,967 | INFO     | exeerrorcode: 0
[2025-10-12 01:18:48] 2025-10-12 05:18:13,967 | INFO     | exeerrordiag: 
[2025-10-12 01:18:48] 2025-10-12 05:18:13,967 | INFO     | exitcode: 0
[2025-10-12 01:18:48] 2025-10-12 05:18:13,967 | INFO     | exitmsg: OK
[2025-10-12 01:18:48] 2025-10-12 05:18:13,967 | INFO     | cpuconsumptiontime: 34389 s
[2025-10-12 01:18:48] 2025-10-12 05:18:13,967 | INFO     | nevents: 400
[2025-10-12 01:18:48] 2025-10-12 05:18:13,967 | INFO     | neventsw: 0
[2025-10-12 01:18:48] 2025-10-12 05:18:13,967 | INFO     | pid: 193490
[2025-10-12 01:18:48] 2025-10-12 05:18:13,967 | INFO     | pgrp: 193490
[2025-10-12 01:18:48] 2025-10-12 05:18:13,967 | INFO     | corecount: 12
[2025-10-12 01:18:48] 2025-10-12 05:18:13,968 | INFO     | event service: False
[2025-10-12 01:18:48] 2025-10-12 05:18:13,968 | INFO     | sizes: {0: 2348743, 1: 2348885, 8: 2349147, 11: 2349175, 4400: 2375259, 4402: 2384441, 4417: 2384579}
[2025-10-12 01:18:48] 2025-10-12 05:18:13,968 | INFO     | --------------------------------------------------
[2025-10-12 01:18:48] 2025-10-12 05:18:13,968 | INFO     | 
[2025-10-12 01:18:48] 2025-10-12 05:18:13,968 | INFO     | executing command: ls -lF /tmp/boinchome/slots/7
[2025-10-12 01:18:48] 2025-10-12 05:18:14,036 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 01:18:48] 2025-10-12 05:18:14,037 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 01:18:48] 2025-10-12 05:18:14,037 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 01:18:48] 2025-10-12 05:18:14,037 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 01:18:48] 2025-10-12 05:18:14,037 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 01:18:48] 2025-10-12 05:18:14,038 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 01:18:48] 2025-10-12 05:18:14,038 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 01:18:48] 2025-10-12 05:18:14,038 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 01:18:48] 2025-10-12 05:18:14,038 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 01:18:48] 2025-10-12 05:18:14,038 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 01:18:48] 2025-10-12 05:18:14,038 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 01:18:48] 2025-10-12 05:18:14,038 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 01:18:48] 2025-10-12 05:18:14,038 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 01:18:48] 2025-10-12 05:18:14,040 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 01:18:48] 2025-10-12 05:18:14,040 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 01:18:48] 2025-10-12 05:18:14,040 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 01:18:48] 2025-10-12 05:18:14,040 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 01:18:48] 2025-10-12 05:18:14,040 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 01:18:48] 2025-10-12 05:18:14,040 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 01:18:48] 2025-10-12 05:18:14,040 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 01:18:48] 2025-10-12 05:18:14,040 | INFO     | job 6839242281 has completed (purged errors)
[2025-10-12 01:18:48] 2025-10-12 05:18:14,040 | INFO     | overall cleanup function is called
[2025-10-12 01:18:48] 2025-10-12 05:18:15,049 | INFO     | --- collectZombieJob: --- 10, [193490]
[2025-10-12 01:18:48] 2025-10-12 05:18:15,050 | INFO     | zombie collector waiting for pid 193490
[2025-10-12 01:18:48] 2025-10-12 05:18:15,050 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 01:18:48] 2025-10-12 05:18:15,050 | INFO     | collected zombie processes
[2025-10-12 01:18:48] 2025-10-12 05:18:15,050 | INFO     | will attempt to kill all subprocesses of pid=193490
[2025-10-12 01:18:48] 2025-10-12 05:18:16,393 | INFO     | process IDs to be killed: [193490] (in reverse order)
[2025-10-12 01:18:48] 2025-10-12 05:18:16,630 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 01:18:48] 2025-10-12 05:18:16,656 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 01:18:48] 2025-10-12 05:18:16,681 | INFO     | did not find any defunct processes belonging to 193490
[2025-10-12 01:18:48] 2025-10-12 05:18:16,699 | INFO     | did not find any defunct processes belonging to 193490
[2025-10-12 01:18:48] 2025-10-12 05:18:16,699 | INFO     | ready for new job
[2025-10-12 01:18:48] 2025-10-12 05:18:16,700 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 01:18:48] 2025-10-12 05:18:16,702 | INFO     | ***************************************
[2025-10-12 01:18:48] 2025-10-12 05:18:16,702 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 01:18:48] 2025-10-12 05:18:16,703 | INFO     | ***************************************
[2025-10-12 01:18:48] 2025-10-12 05:18:16,703 | INFO     | 
[2025-10-12 01:18:48] 2025-10-12 05:18:16,727 | INFO     | architecture information:
[2025-10-12 01:18:48] 2025-10-12 05:18:16,727 | INFO     | executing command: cat /etc/os-release
[2025-10-12 01:18:48] 2025-10-12 05:18:16,749 | INFO     | cat /etc/os-release:
[2025-10-12 01:18:48] NAME="CentOS Linux"
[2025-10-12 01:18:48] VERSION="7 (Core)"
[2025-10-12 01:18:48] ID="centos"
[2025-10-12 01:18:48] ID_LIKE="rhel fedora"
[2025-10-12 01:18:48] VERSION_ID="7"
[2025-10-12 01:18:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 01:18:48] ANSI_COLOR="0;31"
[2025-10-12 01:18:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 01:18:48] HOME_URL="https://www.centos.org/"
[2025-10-12 01:18:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 01:18:48] 
[2025-10-12 01:18:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 01:18:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 01:18:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 01:18:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 01:18:48] 
[2025-10-12 01:18:48] 2025-10-12 05:18:16,749 | INFO     | ***************************************
[2025-10-12 01:18:48] 2025-10-12 05:18:17,255 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2025-10-12 01:18:48] 2025-10-12 05:18:17,329 | INFO     | sufficient remaining disk space (126435196928 B)
[2025-10-12 01:18:48] 2025-10-12 05:18:17,329 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 01:18:48] 2025-10-12 05:18:17,330 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 01:18:48] 2025-10-12 05:18:17,330 | INFO     | update_server=False
[2025-10-12 01:18:48] 2025-10-12 05:18:17,330 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 01:18:48] 2025-10-12 05:18:17,331 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 01:18:48] 2025-10-12 05:18:17,617 | INFO     | all data control threads have been joined
[2025-10-12 01:18:48] 2025-10-12 05:18:18,313 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 01:18:48] 2025-10-12 05:18:18,314 | INFO     | aborting loop
[2025-10-12 01:18:48] 2025-10-12 05:18:18,336 | INFO     | [job] retrieve thread has finished
[2025-10-12 01:18:48] 2025-10-12 05:18:18,537 | INFO     | all payload control threads have been joined
[2025-10-12 01:18:48] 2025-10-12 05:18:18,606 | INFO     | [payload] failed_post thread has finished
[2025-10-12 01:18:48] 2025-10-12 05:18:18,631 | INFO     | [data] control thread has finished
[2025-10-12 01:18:48] 2025-10-12 05:18:18,830 | INFO     | [data] copytool_in thread has finished
[2025-10-12 01:18:48] 2025-10-12 05:18:18,854 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 01:18:48] 2025-10-12 05:18:18,960 | INFO     | all job control threads have been joined
[2025-10-12 01:18:48] 2025-10-12 05:18:18,990 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 01:18:48] 2025-10-12 05:18:19,036 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 01:18:48] 2025-10-12 05:18:19,326 | INFO     | [job] job monitor thread has finished
[2025-10-12 01:18:48] 2025-10-12 05:18:19,350 | INFO     | [data] copytool_out thread has finished
[2025-10-12 01:18:48] 2025-10-12 05:18:19,440 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 01:18:48] 2025-10-12 05:18:19,484 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 01:18:48] 2025-10-12 05:18:19,548 | INFO     | [payload] control thread has finished
[2025-10-12 01:18:48] 2025-10-12 05:18:19,766 | INFO     | [payload] validate_post thread has finished
[2025-10-12 01:18:48] 2025-10-12 05:18:19,822 | INFO     | [job] validate thread has finished
[2025-10-12 01:18:48] 2025-10-12 05:18:19,968 | INFO     | [job] control thread has finished
[2025-10-12 01:18:48] 2025-10-12 05:18:19,996 | INFO     | [job] queue monitor thread has finished
[2025-10-12 01:18:48] 2025-10-12 05:18:23,045 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 01:18:48] 2025-10-12 05:18:24,509 | INFO     | [monitor] cgroup control has ended
[2025-10-12 01:18:48] 2025-10-12 05:18:28,197 | INFO     | job.realtimelogging is not enabled
[2025-10-12 01:18:48] 2025-10-12 05:18:29,203 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 01:18:48] 2025-10-12 05:18:31,279 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139831697614656)>', '<ExcThread(monitor, started 139831342507776)>']
[2025-10-12 01:18:48] 2025-10-12 05:18:36,305 | INFO     | all workflow threads have been joined
[2025-10-12 01:18:48] 2025-10-12 05:18:36,306 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 01:18:48] 2025-10-12 05:18:36,306 | INFO     | traces error code: 0
[2025-10-12 01:18:48] 2025-10-12 05:18:36,306 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 01:18:48] 2025-10-12 05:18:47,022 | INFO     | PID=170271 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 01:18:48] 2025-10-12 05:18:47,023 | INFO     | .. there are 18 such processes running
[2025-10-12 01:18:48] 2025-10-12 05:18:47,035 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 01:18:48] 2025-10-12 05:18:47,036 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 01:18:48] 2025-10-12 05:18:47,036 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 01:18:48] 2025-10-12 05:18:47,036 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 01:18:48] 2025-10-12 05:18:47,036 | CRITICAL | thread 'MainThread' is not alive
[2025-10-12 01:18:48] 2025-10-12 05:18:47,036 | INFO     | [monitor] control thread has ended
[2025-10-12 01:18:48] 2025-10-12 05:18:47,430 [wrapper] ==== pilot stdout END ====
[2025-10-12 01:18:48] 2025-10-12 05:18:47,459 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 01:18:48] 2025-10-12 05:18:47,490 [wrapper] pilotpid: 170271
[2025-10-12 01:18:48] 2025-10-12 05:18:47,515 [wrapper] Pilot exit status: 0
[2025-10-12 01:18:48] 2025-10-12 05:18:47,585 [wrapper] pandaids: 6839242281
[2025-10-12 01:18:48] 2025-10-12 05:18:47,737 [wrapper] cleanup supervisor_pilot  351086 170272
[2025-10-12 01:18:48] 2025-10-12 05:18:47,773 [wrapper] Test setup, not cleaning
[2025-10-12 01:18:48] 2025-10-12 05:18:47,779 [wrapper] apfmon messages muted
[2025-10-12 01:18:48] 2025-10-12 05:18:47,783 [wrapper] ==== wrapper stdout END ====
[2025-10-12 01:18:48] 2025-10-12 05:18:47,787 [wrapper] ==== wrapper stderr END ====
[2025-10-12 01:18:48]  *** Error codes and diagnostics ***
[2025-10-12 01:18:48]     "exeErrorCode": 0,
[2025-10-12 01:18:48]     "exeErrorDiag": "",
[2025-10-12 01:18:48]     "pilotErrorCode": 0,
[2025-10-12 01:18:48]     "pilotErrorDiag": "",
[2025-10-12 01:18:48]  *** Listing of results directory ***
[2025-10-12 01:18:48] total 407488
[2025-10-12 01:18:48] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 21:26 pilot3.tar.gz
[2025-10-12 01:18:48] -rwx------. 1 boincer umatlas     36292 Oct 11 21:50 runpilot2-wrapper.sh
[2025-10-12 01:18:48] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 21:50 queuedata.json
[2025-10-12 01:18:48] -rw-r--r--. 1 boincer umatlas       100 Oct 12 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 01:18:48] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 00:03 run_atlas
[2025-10-12 01:18:48] -rw-r--r--. 1 boincer umatlas       105 Oct 12 00:03 job.xml
[2025-10-12 01:18:48] -rw-r--r--. 2 boincer umatlas 219870490 Oct 12 00:04 EVNT.46676267._003165.pool.root.1
[2025-10-12 01:18:48] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:04 start_atlas.sh
[2025-10-12 01:18:48] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 00:04 shared
[2025-10-12 01:18:48] -rw-r--r--. 2 boincer umatlas    569677 Oct 12 00:04 input.tar.gz
[2025-10-12 01:18:48] -rw-r--r--. 1 boincer umatlas         0 Oct 12 00:04 boinc_lockfile
[2025-10-12 01:18:48] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 00:04 pandaJob.out
[2025-10-12 01:18:48] -rw-------. 1 boincer umatlas    975512 Oct 12 00:04 agis_schedconf.cvmfs.json
[2025-10-12 01:18:48] -rw-------. 1 boincer umatlas   1560580 Oct 12 00:04 agis_ddmendpoints.agis.ALL.json
[2025-10-12 01:18:48] drwx------. 5 boincer umatlas      4096 Oct 12 00:04 pilot3
[2025-10-12 01:18:48] -rw-r--r--. 1 boincer umatlas      6945 Oct 12 01:13 init_data.xml
[2025-10-12 01:18:48] -rw-------. 1 boincer umatlas 191521727 Oct 12 01:17 HITS.46676269._068925.pool.root.1
[2025-10-12 01:18:48] -rw-r--r--. 1 boincer umatlas       529 Oct 12 01:17 boinc_task_state.xml
[2025-10-12 01:18:48] -rw-------. 1 boincer umatlas      1035 Oct 12 01:17 memory_monitor_summary.json
[2025-10-12 01:18:48] -rw-------. 1 boincer umatlas    370050 Oct 12 01:17 log.46676269._068925.job.log.tgz.1
[2025-10-12 01:18:48] -rw-------. 1 boincer umatlas      7773 Oct 12 01:18 heartbeat.json
[2025-10-12 01:18:48] -rw-r--r--. 1 boincer umatlas        27 Oct 12 01:18 wrapper_checkpoint.txt
[2025-10-12 01:18:48] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 01:18 boinc_mmap_file
[2025-10-12 01:18:48] -rw-------. 1 boincer umatlas        95 Oct 12 01:18 pilot_heartbeat.json
[2025-10-12 01:18:48] -rw-------. 1 boincer umatlas       892 Oct 12 01:18 pilotlog.txt
[2025-10-12 01:18:48] -rw-------. 1 boincer umatlas    616820 Oct 12 01:18 log.46676269._068925.job.log.1
[2025-10-12 01:18:48] -rw-------. 1 boincer umatlas       357 Oct 12 01:18 output.list
[2025-10-12 01:18:48] -rw-r--r--. 1 boincer umatlas       620 Oct 12 01:18 runtime_log
[2025-10-12 01:18:48] -rw-------. 1 boincer umatlas   1003520 Oct 12 01:18 result.tar.gz
[2025-10-12 01:18:48] -rw-r--r--. 1 boincer umatlas      8700 Oct 12 01:18 runtime_log.err
[2025-10-12 01:18:48] -rw-------. 1 boincer umatlas       651 Oct 12 01:18 P9uMDmRP0R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmPHiNDmnh4fJn.diag
[2025-10-12 01:18:48] -rw-r--r--. 1 boincer umatlas     22146 Oct 12 01:18 stderr.txt
[2025-10-12 01:18:48] HITS file was successfully produced:
[2025-10-12 01:18:48] -rw-------. 1 boincer umatlas 191521727 Oct 12 01:17 shared/HITS.pool.root.1
[2025-10-12 01:18:48]  *** Contents of shared directory: ***
[2025-10-12 01:18:48] total 403320
[2025-10-12 01:18:48] -rw-r--r--. 2 boincer umatlas 219870490 Oct 12 00:04 ATLAS.root_0
[2025-10-12 01:18:48] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:04 start_atlas.sh
[2025-10-12 01:18:48] -rw-r--r--. 2 boincer umatlas    569677 Oct 12 00:04 input.tar.gz
[2025-10-12 01:18:48] -rw-------. 1 boincer umatlas 191521727 Oct 12 01:17 HITS.pool.root.1
[2025-10-12 01:18:48] -rw-------. 1 boincer umatlas   1003520 Oct 12 01:18 result.tar.gz
01:18:49 (161286): run_atlas exited; CPU time 34476.805491
01:18:49 (161286): called boinc_finish(0)

</stderr_txt>
]]>

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