Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:53 (626335): wrapper (7.7.26015): starting
00:03:53 (626335): wrapper: running run_atlas (--nthreads 11)
[2025-10-12 00:03:53] Arguments: --nthreads 11
[2025-10-12 00:03:53] Threads: 11
[2025-10-12 00:03:53] Checking for CVMFS
[2025-10-12 00:03:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 00:03:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 00:03:55] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 00:03:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 00:03:56] 2.13.2.0 3214202 128756 749160 151606 0 309 22495342 25181185 36212 16776704 0 105029192 99.537 120933452 22712 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 00:03:56] CVMFS is ok
[2025-10-12 00:03:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 00:03:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 00:03:56] Further information can be found at the LHC@home message board.
[2025-10-12 00:03:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 00:03:56] Checking for apptainer binary...
[2025-10-12 00:03:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 00:03:56] Running /usr/bin/apptainer --version
[2025-10-12 00:03:56] apptainer version 1.4.3-1.el9
[2025-10-12 00:03:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 00:03:57] c-16-37.aglt2.org
[2025-10-12 00:03:57] apptainer works
[2025-10-12 00:03:57] Set ATHENA_PROC_NUMBER=11
[2025-10-12 00:03:57] Set ATHENA_CORE_NUMBER=11
[2025-10-12 00:03:57] Starting ATLAS job with PandaID=6839242292
[2025-10-12 00:03:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 11:13:26]  *** The last 200 lines of the pilot log: ***
[2025-10-12 11:13:26] 2025-10-12 15:12:38,923 | INFO     | chi2: 7.101491142014225
[2025-10-12 11:13:26] 2025-10-12 15:12:38,923 | INFO     | current chi2=7.101491142014225 (change=9.32670161417976 %)
[2025-10-12 11:13:26] 2025-10-12 15:12:38,923 | INFO     | right removable region: 646
[2025-10-12 11:13:26] 2025-10-12 15:12:38,924 | INFO     | sum of square deviations: 83975462290.5471
[2025-10-12 11:13:26] 2025-10-12 15:12:38,987 | INFO     | sum of deviations: 431647129392.9295
[2025-10-12 11:13:26] 2025-10-12 15:12:38,987 | INFO     | mean x: 1760262186.3369398
[2025-10-12 11:13:26] 2025-10-12 15:12:38,987 | INFO     | mean y: 2176378.459041731
[2025-10-12 11:13:26] 2025-10-12 15:12:38,994 | INFO     | -- intersect: -9045849068.33617
[2025-10-12 11:13:26] 2025-10-12 15:12:38,994 | INFO     | intersect: -9045849068.33617
[2025-10-12 11:13:26] 2025-10-12 15:12:38,995 | INFO     | chi2: 4.432371952174998
[2025-10-12 11:13:26] 2025-10-12 15:12:38,995 | INFO     | current chi2=4.432371952174998 (change=43.406563982207224 %)
[2025-10-12 11:13:26] 2025-10-12 15:12:38,996 | INFO     | sum of square deviations: 82043350392.47536
[2025-10-12 11:13:26] 2025-10-12 15:12:39,067 | INFO     | sum of deviations: 326252950507.8646
[2025-10-12 11:13:26] 2025-10-12 15:12:39,090 | INFO     | mean x: 1760262338.8395638
[2025-10-12 11:13:26] 2025-10-12 15:12:39,090 | INFO     | mean y: 2184694.6588785048
[2025-10-12 11:13:26] 2025-10-12 15:12:39,090 | INFO     | -- intersect: -6997660862.196313
[2025-10-12 11:13:26] 2025-10-12 15:12:39,090 | INFO     | intersect: -6997660862.196313
[2025-10-12 11:13:26] 2025-10-12 15:12:39,091 | INFO     | chi2: 3.2652479494239124
[2025-10-12 11:13:26] 2025-10-12 15:12:39,092 | INFO     | current chi2=3.2652479494239124 (change=26.33181545556819 %)
[2025-10-12 11:13:26] 2025-10-12 15:12:39,092 | INFO     | sum of square deviations: 80141099399.39418
[2025-10-12 11:13:26] 2025-10-12 15:12:39,142 | INFO     | sum of deviations: 229185545245.4584
[2025-10-12 11:13:26] 2025-10-12 15:12:39,143 | INFO     | mean x: 1760262491.3422291
[2025-10-12 11:13:26] 2025-10-12 15:12:39,143 | INFO     | mean y: 2192475.860282575
[2025-10-12 11:13:26] 2025-10-12 15:12:39,143 | INFO     | -- intersect: -5031762908.790298
[2025-10-12 11:13:26] 2025-10-12 15:12:39,143 | INFO     | intersect: -5031762908.790298
[2025-10-12 11:13:26] 2025-10-12 15:12:39,167 | INFO     | chi2: 2.278262789574079
[2025-10-12 11:13:26] 2025-10-12 15:12:39,167 | INFO     | current chi2=2.278262789574079 (change=30.22695902845502 %)
[2025-10-12 11:13:26] 2025-10-12 15:12:39,168 | INFO     | sum of square deviations: 78268398907.41774
[2025-10-12 11:13:26] 2025-10-12 15:12:39,224 | INFO     | sum of deviations: 150619698278.40527
[2025-10-12 11:13:26] 2025-10-12 15:12:39,224 | INFO     | mean x: 1760262643.8481014
[2025-10-12 11:13:26] 2025-10-12 15:12:39,224 | INFO     | mean y: 2198869.170886076
[2025-10-12 11:13:26] 2025-10-12 15:12:39,247 | INFO     | -- intersect: -3385250369.707332
[2025-10-12 11:13:26] 2025-10-12 15:12:39,247 | INFO     | intersect: -3385250369.707332
[2025-10-12 11:13:26] 2025-10-12 15:12:39,248 | INFO     | chi2: 1.610303172350525
[2025-10-12 11:13:26] 2025-10-12 15:12:39,248 | INFO     | current chi2=1.610303172350525 (change=29.31881345208771 %)
[2025-10-12 11:13:26] 2025-10-12 15:12:39,249 | INFO     | sum of square deviations: 76425055883.68755
[2025-10-12 11:13:26] 2025-10-12 15:12:39,312 | INFO     | sum of deviations: 101903816845.52957
[2025-10-12 11:13:26] 2025-10-12 15:12:39,312 | INFO     | mean x: 1760262796.3556619
[2025-10-12 11:13:26] 2025-10-12 15:12:39,312 | INFO     | mean y: 2202899.7240829347
[2025-10-12 11:13:26] 2025-10-12 15:12:39,313 | INFO     | -- intersect: -2344900357.5221324
[2025-10-12 11:13:26] 2025-10-12 15:12:39,313 | INFO     | intersect: -2344900357.5221324
[2025-10-12 11:13:26] 2025-10-12 15:12:39,314 | INFO     | chi2: 1.3693159437076416
[2025-10-12 11:13:26] 2025-10-12 15:12:39,314 | INFO     | current chi2=1.3693159437076416 (change=14.96533278830467 %)
[2025-10-12 11:13:26] 2025-10-12 15:12:39,314 | INFO     | left removable region: 50
[2025-10-12 11:13:26] 2025-10-12 15:12:39,315 | INFO     | sum of square deviations: 65639651940.52851
[2025-10-12 11:13:26] 2025-10-12 15:12:39,356 | INFO     | sum of deviations: 66490079151.47479
[2025-10-12 11:13:26] 2025-10-12 15:12:39,356 | INFO     | mean x: 1760263375.8674498
[2025-10-12 11:13:26] 2025-10-12 15:12:39,378 | INFO     | mean y: 2214568.4110738253
[2025-10-12 11:13:26] 2025-10-12 15:12:39,378 | INFO     | -- intersect: -1780854776.546921
[2025-10-12 11:13:26] 2025-10-12 15:12:39,378 | INFO     | intersect: -1780854776.546921
[2025-10-12 11:13:26] 2025-10-12 15:12:39,379 | INFO     | chi2: 0.3623386267573768
[2025-10-12 11:13:26] 2025-10-12 15:12:39,379 | INFO     | -- intersect: -1780854776.546921
[2025-10-12 11:13:26] 2025-10-12 15:12:39,380 | INFO     | current memory leak: 1.01 B/s (using 596 data points, chi2=0.36)
[2025-10-12 11:13:26] 2025-10-12 15:12:39,381 | INFO     | could have reported an average CPU frequency of 2803 MHz (25 samples)
[2025-10-12 11:13:26] 2025-10-12 15:12:39,381 | INFO     | ..............................
[2025-10-12 11:13:26] 2025-10-12 15:12:39,381 | INFO     | . Timing measurements:
[2025-10-12 11:13:26] 2025-10-12 15:12:39,381 | INFO     | . get job = 1 s
[2025-10-12 11:13:26] 2025-10-12 15:12:39,381 | INFO     | . initial setup = 9 s
[2025-10-12 11:13:26] 2025-10-12 15:12:39,382 | INFO     | . payload setup = 66 s
[2025-10-12 11:13:26] 2025-10-12 15:12:39,392 | INFO     | . stage-in = 1 s
[2025-10-12 11:13:26] 2025-10-12 15:12:39,392 | INFO     | . payload execution = 39789 s
[2025-10-12 11:13:26] 2025-10-12 15:12:39,392 | INFO     | . stage-out = 8 s
[2025-10-12 11:13:26] 2025-10-12 15:12:39,392 | INFO     | . log creation = 1 s
[2025-10-12 11:13:26] 2025-10-12 15:12:39,392 | INFO     | ..............................
[2025-10-12 11:13:26] 2025-10-12 15:12:40,114 | INFO     | time since job start (40010s) is within the limit (172800.0s)
[2025-10-12 11:13:26] 2025-10-12 15:12:40,204 | INFO     | 
[2025-10-12 11:13:26] 2025-10-12 15:12:40,204 | INFO     | job summary report
[2025-10-12 11:13:26] 2025-10-12 15:12:40,204 | INFO     | --------------------------------------------------
[2025-10-12 11:13:26] 2025-10-12 15:12:40,205 | INFO     | PanDA job id: 6839242292
[2025-10-12 11:13:26] 2025-10-12 15:12:40,205 | INFO     | task id: 46676269
[2025-10-12 11:13:26] 2025-10-12 15:12:40,205 | INFO     | errors: (none)
[2025-10-12 11:13:26] 2025-10-12 15:12:40,205 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 11:13:26] 2025-10-12 15:12:40,205 | INFO     | pilot state: finished 
[2025-10-12 11:13:26] 2025-10-12 15:12:40,205 | INFO     | transexitcode: 0
[2025-10-12 11:13:26] 2025-10-12 15:12:40,205 | INFO     | exeerrorcode: 0
[2025-10-12 11:13:26] 2025-10-12 15:12:40,205 | INFO     | exeerrordiag: 
[2025-10-12 11:13:26] 2025-10-12 15:12:40,205 | INFO     | exitcode: 0
[2025-10-12 11:13:26] 2025-10-12 15:12:40,206 | INFO     | exitmsg: OK
[2025-10-12 11:13:26] 2025-10-12 15:12:40,206 | INFO     | cpuconsumptiontime: 53270 s
[2025-10-12 11:13:26] 2025-10-12 15:12:40,206 | INFO     | nevents: 400
[2025-10-12 11:13:26] 2025-10-12 15:12:40,206 | INFO     | neventsw: 0
[2025-10-12 11:13:26] 2025-10-12 15:12:40,206 | INFO     | pid: 670754
[2025-10-12 11:13:26] 2025-10-12 15:12:40,206 | INFO     | pgrp: 670754
[2025-10-12 11:13:26] 2025-10-12 15:12:40,206 | INFO     | corecount: 11
[2025-10-12 11:13:26] 2025-10-12 15:12:40,206 | INFO     | event service: False
[2025-10-12 11:13:26] 2025-10-12 15:12:40,206 | INFO     | sizes: {0: 2348029, 1: 2348714, 2: 2348714, 3: 2348913, 4: 2348941, 5: 2348969, 16: 2349153, 27: 2349181, 39: 2349209, 50: 2349209, 51: 2349499, 61: 2349807, 39861
[2025-10-12 11:13:26] 2025-10-12 15:12:40,206 | INFO     | --------------------------------------------------
[2025-10-12 11:13:26] 2025-10-12 15:12:40,207 | INFO     | 
[2025-10-12 11:13:26] 2025-10-12 15:12:40,207 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-12 11:13:26] 2025-10-12 15:12:40,267 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 11:13:26] 2025-10-12 15:12:40,286 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 11:13:26] 2025-10-12 15:12:40,286 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 11:13:26] 2025-10-12 15:12:40,286 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 11:13:26] 2025-10-12 15:12:40,287 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 11:13:26] 2025-10-12 15:12:40,287 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 11:13:26] 2025-10-12 15:12:40,287 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 11:13:26] 2025-10-12 15:12:40,287 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 11:13:26] 2025-10-12 15:12:40,287 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 11:13:26] 2025-10-12 15:12:40,287 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 11:13:26] 2025-10-12 15:12:40,287 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 11:13:26] 2025-10-12 15:12:40,288 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 11:13:26] 2025-10-12 15:12:40,288 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 11:13:26] 2025-10-12 15:12:40,288 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 11:13:26] 2025-10-12 15:12:40,288 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 11:13:26] 2025-10-12 15:12:40,288 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 11:13:26] 2025-10-12 15:12:40,288 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 11:13:26] 2025-10-12 15:12:40,288 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 11:13:26] 2025-10-12 15:12:40,289 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 11:13:26] 2025-10-12 15:12:40,289 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 11:13:26] 2025-10-12 15:12:40,289 | INFO     | job 6839242292 has completed (purged errors)
[2025-10-12 11:13:26] 2025-10-12 15:12:40,289 | INFO     | overall cleanup function is called
[2025-10-12 11:13:26] 2025-10-12 15:12:41,312 | INFO     | --- collectZombieJob: --- 10, [670754]
[2025-10-12 11:13:26] 2025-10-12 15:12:41,312 | INFO     | zombie collector waiting for pid 670754
[2025-10-12 11:13:26] 2025-10-12 15:12:41,312 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 11:13:26] 2025-10-12 15:12:41,312 | INFO     | collected zombie processes
[2025-10-12 11:13:26] 2025-10-12 15:12:41,312 | INFO     | will attempt to kill all subprocesses of pid=670754
[2025-10-12 11:13:26] 2025-10-12 15:12:42,217 | INFO     | process IDs to be killed: [670754] (in reverse order)
[2025-10-12 11:13:26] 2025-10-12 15:12:42,445 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 11:13:26] 2025-10-12 15:12:42,446 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 11:13:26] 2025-10-12 15:12:42,596 | INFO     | did not find any defunct processes belonging to 670754
[2025-10-12 11:13:26] 2025-10-12 15:12:42,728 | INFO     | did not find any defunct processes belonging to 670754
[2025-10-12 11:13:26] 2025-10-12 15:12:42,729 | INFO     | ready for new job
[2025-10-12 11:13:26] 2025-10-12 15:12:42,729 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 11:13:26] 2025-10-12 15:12:42,752 | INFO     | ***************************************
[2025-10-12 11:13:26] 2025-10-12 15:12:42,752 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 11:13:26] 2025-10-12 15:12:42,753 | INFO     | ***************************************
[2025-10-12 11:13:26] 2025-10-12 15:12:42,753 | INFO     | 
[2025-10-12 11:13:26] 2025-10-12 15:12:42,768 | INFO     | architecture information:
[2025-10-12 11:13:26] 2025-10-12 15:12:42,784 | INFO     | executing command: cat /etc/os-release
[2025-10-12 11:13:26] 2025-10-12 15:12:42,834 | INFO     | cat /etc/os-release:
[2025-10-12 11:13:26] NAME="CentOS Linux"
[2025-10-12 11:13:26] VERSION="7 (Core)"
[2025-10-12 11:13:26] ID="centos"
[2025-10-12 11:13:26] ID_LIKE="rhel fedora"
[2025-10-12 11:13:26] VERSION_ID="7"
[2025-10-12 11:13:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 11:13:26] ANSI_COLOR="0;31"
[2025-10-12 11:13:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 11:13:26] HOME_URL="https://www.centos.org/"
[2025-10-12 11:13:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 11:13:26] 
[2025-10-12 11:13:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 11:13:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 11:13:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 11:13:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 11:13:26] 
[2025-10-12 11:13:26] 2025-10-12 15:12:42,834 | INFO     | ***************************************
[2025-10-12 11:13:26] 2025-10-12 15:12:43,337 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-12 11:13:26] 2025-10-12 15:12:43,453 | INFO     | sufficient remaining disk space (63705186304 B)
[2025-10-12 11:13:26] 2025-10-12 15:12:43,454 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 11:13:26] 2025-10-12 15:12:43,454 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 11:13:26] 2025-10-12 15:12:43,454 | INFO     | update_server=False
[2025-10-12 11:13:26] 2025-10-12 15:12:43,454 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 11:13:26] 2025-10-12 15:12:43,473 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 11:13:26] 2025-10-12 15:12:43,473 | INFO     | aborting loop
[2025-10-12 11:13:26] 2025-10-12 15:12:43,627 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 11:13:26] 2025-10-12 15:12:43,670 | INFO     | all payload control threads have been joined
[2025-10-12 11:13:26] 2025-10-12 15:12:44,232 | INFO     | all data control threads have been joined
[2025-10-12 11:13:26] 2025-10-12 15:12:44,460 | INFO     | [job] retrieve thread has finished
[2025-10-12 11:13:26] 2025-10-12 15:12:44,479 | INFO     | [job] job monitor thread has finished
[2025-10-12 11:13:26] 2025-10-12 15:12:44,511 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 11:13:26] 2025-10-12 15:12:44,676 | INFO     | [payload] control thread has finished
[2025-10-12 11:13:26] 2025-10-12 15:12:44,760 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 11:13:26] 2025-10-12 15:12:44,780 | INFO     | [data] copytool_in thread has finished
[2025-10-12 11:13:26] 2025-10-12 15:12:44,822 | INFO     | all job control threads have been joined
[2025-10-12 11:13:26] 2025-10-12 15:12:44,868 | INFO     | [job] validate thread has finished
[2025-10-12 11:13:26] 2025-10-12 15:12:45,219 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 11:13:26] 2025-10-12 15:12:45,275 | INFO     | [data] control thread has finished
[2025-10-12 11:13:26] 2025-10-12 15:12:45,593 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 11:13:26] 2025-10-12 15:12:45,598 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 11:13:26] 2025-10-12 15:12:45,828 | INFO     | [job] control thread has finished
[2025-10-12 11:13:26] 2025-10-12 15:12:45,927 | INFO     | [payload] validate_post thread has finished
[2025-10-12 11:13:26] 2025-10-12 15:12:45,971 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 11:13:26] 2025-10-12 15:12:46,047 | INFO     | [payload] failed_post thread has finished
[2025-10-12 11:13:26] 2025-10-12 15:12:46,226 | INFO     | [job] queue monitor thread has finished
[2025-10-12 11:13:26] 2025-10-12 15:12:46,518 | INFO     | [data] copytool_out thread has finished
[2025-10-12 11:13:26] 2025-10-12 15:12:47,647 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 11:13:26] 2025-10-12 15:13:15,221 | INFO     | PID=637302 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 11:13:26] 2025-10-12 15:13:15,221 | INFO     | .. there are 49 such processes running
[2025-10-12 11:13:26] 2025-10-12 15:13:15,222 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 11:13:26] 2025-10-12 15:13:15,222 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 11:13:26] 2025-10-12 15:13:15,222 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 11:13:26] 2025-10-12 15:13:17,254 | INFO     | [monitor] cgroup control has ended
[2025-10-12 11:13:26] 2025-10-12 15:13:19,221 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139750520731456)>', '<ExcThread(monitor, started 139749645874944)>']
[2025-10-12 11:13:26] 2025-10-12 15:13:19,246 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 11:13:26] 2025-10-12 15:13:19,246 | INFO     | [monitor] control thread has ended
[2025-10-12 11:13:26] 2025-10-12 15:13:24,247 | INFO     | all workflow threads have been joined
[2025-10-12 11:13:26] 2025-10-12 15:13:24,247 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 11:13:26] 2025-10-12 15:13:24,247 | INFO     | traces error code: 0
[2025-10-12 11:13:26] 2025-10-12 15:13:24,248 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 11:13:26] 2025-10-12 15:13:24,617 [wrapper] ==== pilot stdout END ====
[2025-10-12 11:13:26] 2025-10-12 15:13:24,641 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 11:13:26] 2025-10-12 15:13:24,672 [wrapper] pilotpid: 637302
[2025-10-12 11:13:26] 2025-10-12 15:13:24,695 [wrapper] Pilot exit status: 0
[2025-10-12 11:13:26] 2025-10-12 15:13:24,835 [wrapper] pandaids: 6839242292
[2025-10-12 11:13:26] 2025-10-12 15:13:25,321 [wrapper] cleanup supervisor_pilot 3051148 637303
[2025-10-12 11:13:26] 2025-10-12 15:13:25,335 [wrapper] Test setup, not cleaning
[2025-10-12 11:13:26] 2025-10-12 15:13:25,376 [wrapper] apfmon messages muted
[2025-10-12 11:13:26] 2025-10-12 15:13:25,405 [wrapper] ==== wrapper stdout END ====
[2025-10-12 11:13:26] 2025-10-12 15:13:25,444 [wrapper] ==== wrapper stderr END ====
[2025-10-12 11:13:26]  *** Error codes and diagnostics ***
[2025-10-12 11:13:26]     "exeErrorCode": 0,
[2025-10-12 11:13:26]     "exeErrorDiag": "",
[2025-10-12 11:13:26]     "pilotErrorCode": 0,
[2025-10-12 11:13:26]     "pilotErrorDiag": "",
[2025-10-12 11:13:26]  *** Listing of results directory ***
[2025-10-12 11:13:26] total 421896
[2025-10-12 11:13:26] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 21:26 pilot3.tar.gz
[2025-10-12 11:13:26] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 21:47 queuedata.json
[2025-10-12 11:13:26] -rwx------. 1 boincer umatlas     36292 Oct 11 21:48 runpilot2-wrapper.sh
[2025-10-12 11:13:26] -rw-r--r--. 1 boincer umatlas       100 Oct 12 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 11:13:26] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 00:03 run_atlas
[2025-10-12 11:13:26] -rw-r--r--. 1 boincer umatlas       105 Oct 12 00:03 job.xml
[2025-10-12 11:13:26] -rw-r--r--. 2 boincer umatlas 219870490 Oct 12 00:03 EVNT.46676267._003165.pool.root.1
[2025-10-12 11:13:26] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:03 start_atlas.sh
[2025-10-12 11:13:26] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 00:03 shared
[2025-10-12 11:13:26] -rw-r--r--. 2 boincer umatlas    569684 Oct 12 00:03 input.tar.gz
[2025-10-12 11:13:26] -rw-r--r--. 1 boincer umatlas         0 Oct 12 00:03 boinc_lockfile
[2025-10-12 11:13:26] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 00:03 pandaJob.out
[2025-10-12 11:13:26] -rw-------. 1 boincer umatlas    975512 Oct 12 00:05 agis_schedconf.cvmfs.json
[2025-10-12 11:13:26] drwx------. 5 boincer umatlas      4096 Oct 12 00:05 pilot3
[2025-10-12 11:13:26] -rw-------. 1 boincer umatlas 198780624 Oct 12 11:11 HITS.46676269._068936.pool.root.1
[2025-10-12 11:13:26] -rw-r--r--. 1 boincer umatlas       531 Oct 12 11:11 boinc_task_state.xml
[2025-10-12 11:13:26] -rw-------. 1 boincer umatlas      1044 Oct 12 11:11 memory_monitor_summary.json
[2025-10-12 11:13:26] -rw-------. 1 boincer umatlas   1560580 Oct 12 11:12 agis_ddmendpoints.agis.ALL.json
[2025-10-12 11:13:26] -rw-------. 1 boincer umatlas    767576 Oct 12 11:12 log.46676269._068936.job.log.tgz.1
[2025-10-12 11:13:26] -rw-------. 1 boincer umatlas      7831 Oct 12 11:12 heartbeat.json
[2025-10-12 11:13:26] -rw-r--r--. 1 boincer umatlas      6614 Oct 12 11:12 init_data.xml
[2025-10-12 11:13:26] -rw-------. 1 boincer umatlas        95 Oct 12 11:13 pilot_heartbeat.json
[2025-10-12 11:13:26] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 11:13 boinc_mmap_file
[2025-10-12 11:13:26] -rw-r--r--. 1 boincer umatlas        28 Oct 12 11:13 wrapper_checkpoint.txt
[2025-10-12 11:13:26] -rw-------. 1 boincer umatlas      4823 Oct 12 11:13 pilotlog.txt
[2025-10-12 11:13:26] -rw-------. 1 boincer umatlas   3961278 Oct 12 11:13 log.46676269._068936.job.log.1
[2025-10-12 11:13:26] -rw-------. 1 boincer umatlas       357 Oct 12 11:13 output.list
[2025-10-12 11:13:26] -rw-r--r--. 1 boincer umatlas       620 Oct 12 11:13 runtime_log
[2025-10-12 11:13:26] -rw-------. 1 boincer umatlas   4751360 Oct 12 11:13 result.tar.gz
[2025-10-12 11:13:26] -rw-r--r--. 1 boincer umatlas      8701 Oct 12 11:13 runtime_log.err
[2025-10-12 11:13:26] -rw-------. 1 boincer umatlas       657 Oct 12 11:13 HKHMDmAN0R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmwySMDm92nKCn.diag
[2025-10-12 11:13:26] -rw-r--r--. 1 boincer umatlas     21072 Oct 12 11:13 stderr.txt
[2025-10-12 11:13:26] HITS file was successfully produced:
[2025-10-12 11:13:26] -rw-------. 1 boincer umatlas 198780624 Oct 12 11:11 shared/HITS.pool.root.1
[2025-10-12 11:13:26]  *** Contents of shared directory: ***
[2025-10-12 11:13:26] total 414068
[2025-10-12 11:13:26] -rw-r--r--. 2 boincer umatlas 219870490 Oct 12 00:03 ATLAS.root_0
[2025-10-12 11:13:26] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:03 start_atlas.sh
[2025-10-12 11:13:26] -rw-r--r--. 2 boincer umatlas    569684 Oct 12 00:03 input.tar.gz
[2025-10-12 11:13:26] -rw-------. 1 boincer umatlas 198780624 Oct 12 11:11 HITS.pool.root.1
[2025-10-12 11:13:26] -rw-------. 1 boincer umatlas   4751360 Oct 12 11:13 result.tar.gz
11:13:27 (626335): run_atlas exited; CPU time 55019.830607
11:13:27 (626335): called boinc_finish(0)

</stderr_txt>
]]>

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