Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:04:18 (2359359): wrapper (7.7.26015): starting
00:04:18 (2359359): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 00:04:18] Arguments: --nthreads 8
[2025-10-12 00:04:18] Threads: 8
[2025-10-12 00:04:18] Checking for CVMFS
[2025-10-12 00:04:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 00:04:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 00:04:19] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 00:04:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 00:04:20] 2.13.2.0 342865 26758 106036 151606 2 841 26298198 40960000 35862 16776704 0 199773587 99.775 112914328 46512 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 00:04:20] CVMFS is ok
[2025-10-12 00:04:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 00:04:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 00:04:20] Further information can be found at the LHC@home message board.
[2025-10-12 00:04:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 00:04:20] Checking for apptainer binary...
[2025-10-12 00:04:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 00:04:20] Running /usr/bin/apptainer --version
[2025-10-12 00:04:20] apptainer version 1.4.3-1.el9
[2025-10-12 00:04:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 00:04:21] c-208-36.aglt2.org
[2025-10-12 00:04:21] apptainer works
[2025-10-12 00:04:21] Set ATHENA_PROC_NUMBER=8
[2025-10-12 00:04:21] Set ATHENA_CORE_NUMBER=8
[2025-10-12 00:04:21] Starting ATLAS job with PandaID=6838773050
[2025-10-12 00:04:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 03:45:08]  *** The last 200 lines of the pilot log: ***
[2025-10-12 03:45:08] 2025-10-12 07:44:03,811 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 03:45:08] 2025-10-12 07:44:03,811 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 03:45:08] 2025-10-12 07:44:03,811 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 03:45:08] 2025-10-12 07:44:03,817 | INFO     | fitting pss+swap vs Time
[2025-10-12 03:45:08] 2025-10-12 07:44:03,818 | INFO     | sum of square deviations: 2954347196.320742
[2025-10-12 03:45:08] 2025-10-12 07:44:03,818 | INFO     | sum of deviations: 99821445989.64154
[2025-10-12 03:45:08] 2025-10-12 07:44:03,818 | INFO     | mean x: 1760248568.5566037
[2025-10-12 03:45:08] 2025-10-12 07:44:03,819 | INFO     | mean y: 2394881.113207547
[2025-10-12 03:45:08] 2025-10-12 07:44:03,819 | INFO     | -- intersect: -59472861660.616776
[2025-10-12 03:45:08] 2025-10-12 07:44:03,819 | INFO     | intersect: -59472861660.616776
[2025-10-12 03:45:08] 2025-10-12 07:44:03,819 | INFO     | chi2: 5.621795572480785
[2025-10-12 03:45:08] 2025-10-12 07:44:03,819 | INFO     | sum of square deviations: 2750198191.304366
[2025-10-12 03:45:08] 2025-10-12 07:44:03,820 | INFO     | sum of deviations: 111231598121.01447
[2025-10-12 03:45:08] 2025-10-12 07:44:03,820 | INFO     | mean x: 1760248416.057971
[2025-10-12 03:45:08] 2025-10-12 07:44:03,820 | INFO     | mean y: 2403201.0821256037
[2025-10-12 03:45:08] 2025-10-12 07:44:03,820 | INFO     | -- intersect: -71190736634.1421
[2025-10-12 03:45:08] 2025-10-12 07:44:03,820 | INFO     | intersect: -71190736634.1421
[2025-10-12 03:45:08] 2025-10-12 07:44:03,820 | INFO     | chi2: 4.847567620460186
[2025-10-12 03:45:08] 2025-10-12 07:44:03,820 | INFO     | current chi2=4.847567620460186 (change=13.771898000178398 %)
[2025-10-12 03:45:08] 2025-10-12 07:44:03,820 | INFO     | right removable region: 206
[2025-10-12 03:45:08] 2025-10-12 07:44:03,820 | INFO     | sum of square deviations: 2750190871.304366
[2025-10-12 03:45:08] 2025-10-12 07:44:03,821 | INFO     | sum of deviations: 32633477940.68111
[2025-10-12 03:45:08] 2025-10-12 07:44:03,821 | INFO     | mean x: 1760248721.057971
[2025-10-12 03:45:08] 2025-10-12 07:44:03,821 | INFO     | mean y: 2444998.526570048
[2025-10-12 03:45:08] 2025-10-12 07:44:03,821 | INFO     | -- intersect: -20884482671.8839
[2025-10-12 03:45:08] 2025-10-12 07:44:03,821 | INFO     | intersect: -20884482671.8839
[2025-10-12 03:45:08] 2025-10-12 07:44:03,825 | INFO     | chi2: 1.5622961553029175
[2025-10-12 03:45:08] 2025-10-12 07:44:03,825 | INFO     | current chi2=1.5622961553029175 (change=72.21001484026736 %)
[2025-10-12 03:45:08] 2025-10-12 07:44:03,826 | INFO     | sum of square deviations: 2555662633.787131
[2025-10-12 03:45:08] 2025-10-12 07:44:03,826 | INFO     | sum of deviations: 6445969487.499996
[2025-10-12 03:45:08] 2025-10-12 07:44:03,826 | INFO     | mean x: 1760248873.559406
[2025-10-12 03:45:08] 2025-10-12 07:44:03,826 | INFO     | mean y: 2465442.5
[2025-10-12 03:45:08] 2025-10-12 07:44:03,826 | INFO     | -- intersect: -4437287433.863124
[2025-10-12 03:45:08] 2025-10-12 07:44:03,826 | INFO     | intersect: -4437287433.863124
[2025-10-12 03:45:08] 2025-10-12 07:44:03,827 | INFO     | chi2: 0.9439590138192532
[2025-10-12 03:45:08] 2025-10-12 07:44:03,827 | INFO     | current chi2=0.9439590138192532 (change=39.57874052143291 %)
[2025-10-12 03:45:08] 2025-10-12 07:44:03,827 | INFO     | sum of square deviations: 2370554073.4923997
[2025-10-12 03:45:08] 2025-10-12 07:44:03,827 | INFO     | sum of deviations: -4542472002.604063
[2025-10-12 03:45:08] 2025-10-12 07:44:03,828 | INFO     | mean x: 1760249026.0507615
[2025-10-12 03:45:08] 2025-10-12 07:44:03,828 | INFO     | mean y: 2474446.3604060914
[2025-10-12 03:45:08] 2025-10-12 07:44:03,828 | INFO     | -- intersect: 3375475723.93379
[2025-10-12 03:45:08] 2025-10-12 07:44:03,828 | INFO     | intersect: 3375475723.93379
[2025-10-12 03:45:08] 2025-10-12 07:44:03,828 | INFO     | chi2: 0.8311033390203537
[2025-10-12 03:45:08] 2025-10-12 07:44:03,828 | INFO     | current chi2=0.8311033390203537 (change=11.955569378196412 %)
[2025-10-12 03:45:08] 2025-10-12 07:44:03,828 | INFO     | left removable region: 30
[2025-10-12 03:45:08] 2025-10-12 07:44:03,828 | INFO     | sum of square deviations: 1690379549.6363673
[2025-10-12 03:45:08] 2025-10-12 07:44:03,829 | INFO     | sum of deviations: 3959685853.363636
[2025-10-12 03:45:08] 2025-10-12 07:44:03,829 | INFO     | mean x: 1760249300.5454545
[2025-10-12 03:45:08] 2025-10-12 07:44:03,829 | INFO     | mean y: 2489673.5795454546
[2025-10-12 03:45:08] 2025-10-12 07:44:03,829 | INFO     | -- intersect: -4120864903.9545107
[2025-10-12 03:45:08] 2025-10-12 07:44:03,829 | INFO     | intersect: -4120864903.9545107
[2025-10-12 03:45:08] 2025-10-12 07:44:03,829 | INFO     | chi2: 0.0007803032202529269
[2025-10-12 03:45:08] 2025-10-12 07:44:03,829 | INFO     | -- intersect: -4120864903.9545107
[2025-10-12 03:45:08] 2025-10-12 07:44:03,829 | INFO     | current memory leak: 2.34 B/s (using 176 data points, chi2=0.00)
[2025-10-12 03:45:08] 2025-10-12 07:44:03,833 | INFO     | could have reported an average CPU frequency of 3786 MHz (11 samples)
[2025-10-12 03:45:08] 2025-10-12 07:44:03,834 | INFO     | ..............................
[2025-10-12 03:45:08] 2025-10-12 07:44:03,834 | INFO     | . Timing measurements:
[2025-10-12 03:45:08] 2025-10-12 07:44:03,834 | INFO     | . get job = 0 s
[2025-10-12 03:45:08] 2025-10-12 07:44:03,834 | INFO     | . initial setup = 4 s
[2025-10-12 03:45:08] 2025-10-12 07:44:03,834 | INFO     | . payload setup = 62 s
[2025-10-12 03:45:08] 2025-10-12 07:44:03,834 | INFO     | . stage-in = 0 s
[2025-10-12 03:45:08] 2025-10-12 07:44:03,834 | INFO     | . payload execution = 12925 s
[2025-10-12 03:45:08] 2025-10-12 07:44:03,834 | INFO     | . stage-out = 3 s
[2025-10-12 03:45:08] 2025-10-12 07:44:03,834 | INFO     | . log creation = 0 s
[2025-10-12 03:45:08] 2025-10-12 07:44:03,834 | INFO     | ..............................
[2025-10-12 03:45:08] 2025-10-12 07:44:03,958 | INFO     | 
[2025-10-12 03:45:08] 2025-10-12 07:44:03,960 | INFO     | job summary report
[2025-10-12 03:45:08] 2025-10-12 07:44:03,961 | INFO     | --------------------------------------------------
[2025-10-12 03:45:08] 2025-10-12 07:44:03,961 | INFO     | PanDA job id: 6838773050
[2025-10-12 03:45:08] 2025-10-12 07:44:03,961 | INFO     | task id: 46676269
[2025-10-12 03:45:08] 2025-10-12 07:44:03,961 | INFO     | errors: (none)
[2025-10-12 03:45:08] 2025-10-12 07:44:03,961 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 03:45:08] 2025-10-12 07:44:03,961 | INFO     | pilot state: finished 
[2025-10-12 03:45:08] 2025-10-12 07:44:03,961 | INFO     | transexitcode: 0
[2025-10-12 03:45:08] 2025-10-12 07:44:03,961 | INFO     | exeerrorcode: 0
[2025-10-12 03:45:08] 2025-10-12 07:44:03,961 | INFO     | exeerrordiag: 
[2025-10-12 03:45:08] 2025-10-12 07:44:03,961 | INFO     | exitcode: 0
[2025-10-12 03:45:08] 2025-10-12 07:44:03,961 | INFO     | exitmsg: OK
[2025-10-12 03:45:08] 2025-10-12 07:44:03,961 | INFO     | cpuconsumptiontime: 23373 s
[2025-10-12 03:45:08] 2025-10-12 07:44:03,961 | INFO     | nevents: 400
[2025-10-12 03:45:08] 2025-10-12 07:44:03,961 | INFO     | neventsw: 0
[2025-10-12 03:45:08] 2025-10-12 07:44:03,961 | INFO     | pid: 2423290
[2025-10-12 03:45:08] 2025-10-12 07:44:03,961 | INFO     | pgrp: 2423290
[2025-10-12 03:45:08] 2025-10-12 07:44:03,961 | INFO     | corecount: 8
[2025-10-12 03:45:08] 2025-10-12 07:44:03,961 | INFO     | event service: False
[2025-10-12 03:45:08] 2025-10-12 07:44:03,961 | INFO     | sizes: {0: 2348686, 1: 2348885, 12: 2348885, 23: 2348913, 34: 2348941, 39: 2349231, 48: 2349387, 12991: 2379454, 12995: 2388508, 13023: 2388646}
[2025-10-12 03:45:08] 2025-10-12 07:44:03,961 | INFO     | --------------------------------------------------
[2025-10-12 03:45:08] 2025-10-12 07:44:03,961 | INFO     | 
[2025-10-12 03:45:08] 2025-10-12 07:44:03,961 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2025-10-12 03:45:08] 2025-10-12 07:44:04,138 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 03:45:08] 2025-10-12 07:44:04,138 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 03:45:08] 2025-10-12 07:44:04,138 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 03:45:08] 2025-10-12 07:44:04,138 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 03:45:08] 2025-10-12 07:44:04,138 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 03:45:08] 2025-10-12 07:44:04,138 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 03:45:08] 2025-10-12 07:44:04,138 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 03:45:08] 2025-10-12 07:44:04,138 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 03:45:08] 2025-10-12 07:44:04,138 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 03:45:08] 2025-10-12 07:44:04,138 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 03:45:08] 2025-10-12 07:44:04,138 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 03:45:08] 2025-10-12 07:44:04,139 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 03:45:08] 2025-10-12 07:44:04,139 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 03:45:08] 2025-10-12 07:44:04,139 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 03:45:08] 2025-10-12 07:44:04,139 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 03:45:08] 2025-10-12 07:44:04,139 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 03:45:08] 2025-10-12 07:44:04,139 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 03:45:08] 2025-10-12 07:44:04,139 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 03:45:08] 2025-10-12 07:44:04,139 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 03:45:08] 2025-10-12 07:44:04,139 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 03:45:08] 2025-10-12 07:44:04,139 | INFO     | job 6838773050 has completed (purged errors)
[2025-10-12 03:45:08] 2025-10-12 07:44:04,139 | INFO     | overall cleanup function is called
[2025-10-12 03:45:08] 2025-10-12 07:44:05,165 | INFO     | --- collectZombieJob: --- 10, [2423290]
[2025-10-12 03:45:08] 2025-10-12 07:44:05,166 | INFO     | zombie collector waiting for pid 2423290
[2025-10-12 03:45:08] 2025-10-12 07:44:05,166 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 03:45:08] 2025-10-12 07:44:05,166 | INFO     | collected zombie processes
[2025-10-12 03:45:08] 2025-10-12 07:44:05,166 | INFO     | will attempt to kill all subprocesses of pid=2423290
[2025-10-12 03:45:08] 2025-10-12 07:44:06,076 | INFO     | process IDs to be killed: [2423290] (in reverse order)
[2025-10-12 03:45:08] 2025-10-12 07:44:06,303 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 03:45:08] 2025-10-12 07:44:06,304 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 03:45:08] 2025-10-12 07:44:06,393 | INFO     | did not find any defunct processes belonging to 2423290
[2025-10-12 03:45:08] 2025-10-12 07:44:06,468 | INFO     | did not find any defunct processes belonging to 2423290
[2025-10-12 03:45:08] 2025-10-12 07:44:06,469 | INFO     | ready for new job
[2025-10-12 03:45:08] 2025-10-12 07:44:06,469 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 03:45:08] 2025-10-12 07:44:06,474 | INFO     | ***************************************
[2025-10-12 03:45:08] 2025-10-12 07:44:06,474 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 03:45:08] 2025-10-12 07:44:06,474 | INFO     | ***************************************
[2025-10-12 03:45:08] 2025-10-12 07:44:06,474 | INFO     | 
[2025-10-12 03:45:08] 2025-10-12 07:44:06,483 | INFO     | architecture information:
[2025-10-12 03:45:08] 2025-10-12 07:44:06,490 | INFO     | executing command: cat /etc/os-release
[2025-10-12 03:45:08] 2025-10-12 07:44:06,568 | INFO     | cat /etc/os-release:
[2025-10-12 03:45:08] NAME="CentOS Linux"
[2025-10-12 03:45:08] VERSION="7 (Core)"
[2025-10-12 03:45:08] ID="centos"
[2025-10-12 03:45:08] ID_LIKE="rhel fedora"
[2025-10-12 03:45:08] VERSION_ID="7"
[2025-10-12 03:45:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 03:45:08] ANSI_COLOR="0;31"
[2025-10-12 03:45:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 03:45:08] HOME_URL="https://www.centos.org/"
[2025-10-12 03:45:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 03:45:08] 
[2025-10-12 03:45:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 03:45:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 03:45:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 03:45:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 03:45:08] 
[2025-10-12 03:45:08] 2025-10-12 07:44:06,568 | INFO     | ***************************************
[2025-10-12 03:45:08] 2025-10-12 07:44:07,071 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2025-10-12 03:45:08] 2025-10-12 07:44:07,338 | INFO     | sufficient remaining disk space (170020306944 B)
[2025-10-12 03:45:08] 2025-10-12 07:44:07,338 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 03:45:08] 2025-10-12 07:44:07,338 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 03:45:08] 2025-10-12 07:44:07,338 | INFO     | update_server=False
[2025-10-12 03:45:08] 2025-10-12 07:44:07,338 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 03:45:08] 2025-10-12 07:44:07,338 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 03:45:08] 2025-10-12 07:44:07,339 | INFO     | aborting loop
[2025-10-12 03:45:08] 2025-10-12 07:44:07,348 | INFO     | all data control threads have been joined
[2025-10-12 03:45:08] 2025-10-12 07:44:07,994 | INFO     | all payload control threads have been joined
[2025-10-12 03:45:08] 2025-10-12 07:44:08,202 | INFO     | all job control threads have been joined
[2025-10-12 03:45:08] 2025-10-12 07:44:08,344 | INFO     | [job] retrieve thread has finished
[2025-10-12 03:45:08] 2025-10-12 07:44:08,345 | INFO     | [job] job monitor thread has finished
[2025-10-12 03:45:08] 2025-10-12 07:44:08,354 | INFO     | [data] control thread has finished
[2025-10-12 03:45:08] 2025-10-12 07:44:08,428 | INFO     | [payload] failed_post thread has finished
[2025-10-12 03:45:08] 2025-10-12 07:44:08,469 | INFO     | [payload] validate_post thread has finished
[2025-10-12 03:45:08] 2025-10-12 07:44:08,543 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 03:45:08] 2025-10-12 07:44:08,638 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 03:45:08] 2025-10-12 07:44:08,769 | INFO     | [data] copytool_in thread has finished
[2025-10-12 03:45:08] 2025-10-12 07:44:08,979 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 03:45:08] 2025-10-12 07:44:08,981 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 03:45:08] 2025-10-12 07:44:09,000 | INFO     | [payload] control thread has finished
[2025-10-12 03:45:08] 2025-10-12 07:44:09,208 | INFO     | [job] control thread has finished
[2025-10-12 03:45:08] 2025-10-12 07:44:09,290 | INFO     | [job] validate thread has finished
[2025-10-12 03:45:08] 2025-10-12 07:44:09,382 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 03:45:08] 2025-10-12 07:44:09,409 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 03:45:08] 2025-10-12 07:44:09,437 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 03:45:08] 2025-10-12 07:44:10,002 | INFO     | [job] queue monitor thread has finished
[2025-10-12 03:45:08] 2025-10-12 07:44:10,552 | INFO     | [data] copytool_out thread has finished
[2025-10-12 03:45:08] 2025-10-12 07:44:12,647 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 03:45:08] 2025-10-12 07:44:37,457 | INFO     | PID=2372450 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 03:45:08] 2025-10-12 07:44:37,458 | INFO     | .. there are 35 such processes running
[2025-10-12 03:45:08] 2025-10-12 07:44:37,458 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 03:45:08] 2025-10-12 07:44:37,458 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 03:45:08] 2025-10-12 07:44:37,458 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 03:45:08] 2025-10-12 07:45:00,162 | INFO     | [monitor] cgroup control has ended
[2025-10-12 03:45:08] 2025-10-12 07:45:00,950 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140032435963712)>', '<ExcThread(monitor, started 140031939294976)>']
[2025-10-12 03:45:08] 2025-10-12 07:45:01,610 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 03:45:08] 2025-10-12 07:45:01,611 | INFO     | [monitor] control thread has ended
[2025-10-12 03:45:08] 2025-10-12 07:45:05,976 | INFO     | all workflow threads have been joined
[2025-10-12 03:45:08] 2025-10-12 07:45:05,977 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 03:45:08] 2025-10-12 07:45:05,977 | INFO     | traces error code: 0
[2025-10-12 03:45:08] 2025-10-12 07:45:05,977 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 03:45:08] 2025-10-12 07:45:06,225 [wrapper] ==== pilot stdout END ====
[2025-10-12 03:45:08] 2025-10-12 07:45:06,260 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 03:45:08] 2025-10-12 07:45:06,288 [wrapper] pilotpid: 2372450
[2025-10-12 03:45:08] 2025-10-12 07:45:06,312 [wrapper] Pilot exit status: 0
[2025-10-12 03:45:08] 2025-10-12 07:45:06,565 [wrapper] pandaids: 6838773050
[2025-10-12 03:45:08] 2025-10-12 07:45:07,047 [wrapper] cleanup supervisor_pilot 3369242 2372451
[2025-10-12 03:45:08] 2025-10-12 07:45:07,071 [wrapper] Test setup, not cleaning
[2025-10-12 03:45:08] 2025-10-12 07:45:07,144 [wrapper] apfmon messages muted
[2025-10-12 03:45:08] 2025-10-12 07:45:07,178 [wrapper] ==== wrapper stdout END ====
[2025-10-12 03:45:08] 2025-10-12 07:45:07,192 [wrapper] ==== wrapper stderr END ====
[2025-10-12 03:45:08]  *** Error codes and diagnostics ***
[2025-10-12 03:45:08]     "exeErrorCode": 0,
[2025-10-12 03:45:08]     "exeErrorDiag": "",
[2025-10-12 03:45:08]     "pilotErrorCode": 0,
[2025-10-12 03:45:08]     "pilotErrorDiag": "",
[2025-10-12 03:45:08]  *** Listing of results directory ***
[2025-10-12 03:45:08] total 409240
[2025-10-12 03:45:08] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 14:14 pilot3.tar.gz
[2025-10-12 03:45:08] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 14:21 queuedata.json
[2025-10-12 03:45:08] -rwx------. 1 boincer umatlas     36292 Oct 11 14:23 runpilot2-wrapper.sh
[2025-10-12 03:45:08] -rw-r--r--. 1 boincer umatlas       100 Oct 12 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 03:45:08] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 00:04 run_atlas
[2025-10-12 03:45:08] -rw-r--r--. 1 boincer umatlas       105 Oct 12 00:04 job.xml
[2025-10-12 03:45:08] -rw-r--r--. 2 boincer umatlas 222493948 Oct 12 00:04 EVNT.46676267._002510.pool.root.1
[2025-10-12 03:45:08] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:04 start_atlas.sh
[2025-10-12 03:45:08] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 00:04 shared
[2025-10-12 03:45:08] -rw-r--r--. 2 boincer umatlas    569682 Oct 12 00:04 input.tar.gz
[2025-10-12 03:45:08] -rw-r--r--. 1 boincer umatlas         0 Oct 12 00:04 boinc_lockfile
[2025-10-12 03:45:08] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 00:04 pandaJob.out
[2025-10-12 03:45:08] -rw-------. 1 boincer umatlas    975512 Oct 12 00:05 agis_schedconf.cvmfs.json
[2025-10-12 03:45:08] drwx------. 5 boincer umatlas      4096 Oct 12 00:05 pilot3
[2025-10-12 03:45:08] -rw-r--r--. 1 boincer umatlas      7173 Oct 12 03:39 init_data.xml
[2025-10-12 03:45:08] -rw-------. 1 boincer umatlas 188457736 Oct 12 03:42 HITS.46676269._062480.pool.root.1
[2025-10-12 03:45:08] -rw-r--r--. 1 boincer umatlas       530 Oct 12 03:42 boinc_task_state.xml
[2025-10-12 03:45:08] -rw-------. 1 boincer umatlas      1059 Oct 12 03:43 memory_monitor_summary.json
[2025-10-12 03:45:08] -rw-------. 1 boincer umatlas   1560580 Oct 12 03:43 agis_ddmendpoints.agis.ALL.json
[2025-10-12 03:45:08] -rw-------. 1 boincer umatlas    430642 Oct 12 03:43 log.46676269._062480.job.log.tgz.1
[2025-10-12 03:45:08] -rw-------. 1 boincer umatlas        95 Oct 12 03:43 pilot_heartbeat.json
[2025-10-12 03:45:08] -rw-------. 1 boincer umatlas      7830 Oct 12 03:44 heartbeat.json
[2025-10-12 03:45:08] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 03:45 boinc_mmap_file
[2025-10-12 03:45:08] -rw-r--r--. 1 boincer umatlas        27 Oct 12 03:45 wrapper_checkpoint.txt
[2025-10-12 03:45:08] -rw-------. 1 boincer umatlas      4825 Oct 12 03:45 pilotlog.txt
[2025-10-12 03:45:08] -rw-------. 1 boincer umatlas   1670705 Oct 12 03:45 log.46676269._062480.job.log.1
[2025-10-12 03:45:08] -rw-------. 1 boincer umatlas       357 Oct 12 03:45 output.list
[2025-10-12 03:45:08] -rw-r--r--. 1 boincer umatlas       620 Oct 12 03:45 runtime_log
[2025-10-12 03:45:08] -rw-------. 1 boincer umatlas   2119680 Oct 12 03:45 result.tar.gz
[2025-10-12 03:45:08] -rw-r--r--. 1 boincer umatlas      8704 Oct 12 03:45 runtime_log.err
[2025-10-12 03:45:08] -rw-------. 1 boincer umatlas       660 Oct 12 03:45 9mcMDmrQtR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm9DhNDm8uJKTo.diag
[2025-10-12 03:45:08] -rw-r--r--. 1 boincer umatlas     20998 Oct 12 03:45 stderr.txt
[2025-10-12 03:45:08] HITS file was successfully produced:
[2025-10-12 03:45:08] -rw-------. 1 boincer umatlas 188457736 Oct 12 03:42 shared/HITS.pool.root.1
[2025-10-12 03:45:08]  *** Contents of shared directory: ***
[2025-10-12 03:45:08] total 403980
[2025-10-12 03:45:08] -rw-r--r--. 2 boincer umatlas 222493948 Oct 12 00:04 ATLAS.root_0
[2025-10-12 03:45:08] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:04 start_atlas.sh
[2025-10-12 03:45:08] -rw-r--r--. 2 boincer umatlas    569682 Oct 12 00:04 input.tar.gz
[2025-10-12 03:45:08] -rw-------. 1 boincer umatlas 188457736 Oct 12 03:42 HITS.pool.root.1
[2025-10-12 03:45:08] -rw-------. 1 boincer umatlas   2119680 Oct 12 03:45 result.tar.gz
03:45:10 (2359359): run_atlas exited; CPU time 23746.698528
03:45:10 (2359359): called boinc_finish(0)

</stderr_txt>
]]>

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