Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:11:21 (918166): wrapper (7.7.26015): starting
00:11:21 (918166): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 00:11:21] Arguments: --nthreads 12
[2025-10-12 00:11:21] Threads: 12
[2025-10-12 00:11:21] Checking for CVMFS
[2025-10-12 00:11:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 00:11:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 00:11:22] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 00:11:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 00:11:22] 2.13.2.0 128519 115479 278144 151607 3 211 20975428 39288833 7200 16776704 1 82376181 99.651 75342894 34337 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 00:11:22] CVMFS is ok
[2025-10-12 00:11:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 00:11:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 00:11:22] Further information can be found at the LHC@home message board.
[2025-10-12 00:11:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 00:11:22] Checking for apptainer binary...
[2025-10-12 00:11:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 00:11:22] Running /usr/bin/apptainer --version
[2025-10-12 00:11:22] apptainer version 1.4.3-1.el9
[2025-10-12 00:11:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 00:11:22] c-211-3.aglt2.org
[2025-10-12 00:11:22] apptainer works
[2025-10-12 00:11:22] Set ATHENA_PROC_NUMBER=12
[2025-10-12 00:11:22] Set ATHENA_CORE_NUMBER=12
[2025-10-12 00:11:22] Starting ATLAS job with PandaID=6838990821
[2025-10-12 00:11:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 04:20:18]  *** The last 200 lines of the pilot log: ***
[2025-10-12 04:20:18] 2025-10-12 08:19:25,572 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 04:20:18] 2025-10-12 08:19:25,572 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 04:20:18] 2025-10-12 08:19:25,577 | INFO     | fitting pss+swap vs Time
[2025-10-12 04:20:18] 2025-10-12 08:19:25,578 | INFO     | sum of square deviations: 4449225716.29629
[2025-10-12 04:20:18] 2025-10-12 08:19:25,580 | INFO     | sum of deviations: 45092794681.55557
[2025-10-12 04:20:18] 2025-10-12 08:19:25,580 | INFO     | mean x: 1760249736.5432098
[2025-10-12 04:20:18] 2025-10-12 08:19:25,580 | INFO     | mean y: 2663005.185185185
[2025-10-12 04:20:18] 2025-10-12 08:19:25,580 | INFO     | -- intersect: -17837425365.130123
[2025-10-12 04:20:18] 2025-10-12 08:19:25,580 | INFO     | intersect: -17837425365.130123
[2025-10-12 04:20:18] 2025-10-12 08:19:25,581 | INFO     | chi2: 2.5028388944431903
[2025-10-12 04:20:18] 2025-10-12 08:19:25,581 | INFO     | sum of square deviations: 4180213549.39495
[2025-10-12 04:20:18] 2025-10-12 08:19:25,583 | INFO     | sum of deviations: 60252079447.64706
[2025-10-12 04:20:18] 2025-10-12 08:19:25,583 | INFO     | mean x: 1760249584.0504203
[2025-10-12 04:20:18] 2025-10-12 08:19:25,584 | INFO     | mean y: 2671441.029411765
[2025-10-12 04:20:18] 2025-10-12 08:19:25,584 | INFO     | -- intersect: -25368926572.48468
[2025-10-12 04:20:18] 2025-10-12 08:19:25,584 | INFO     | intersect: -25368926572.48468
[2025-10-12 04:20:18] 2025-10-12 08:19:25,584 | INFO     | chi2: 1.7990396405087186
[2025-10-12 04:20:18] 2025-10-12 08:19:25,584 | INFO     | current chi2=1.7990396405087186 (change=28.12003822927032 %)
[2025-10-12 04:20:18] 2025-10-12 08:19:25,585 | INFO     | sum of square deviations: 3922256837.5794153
[2025-10-12 04:20:18] 2025-10-12 08:19:25,587 | INFO     | sum of deviations: 58462324105.699585
[2025-10-12 04:20:18] 2025-10-12 08:19:25,587 | INFO     | mean x: 1760249431.553648
[2025-10-12 04:20:18] 2025-10-12 08:19:25,587 | INFO     | mean y: 2670382.8240343346
[2025-10-12 04:20:18] 2025-10-12 08:19:25,587 | INFO     | -- intersect: -26234334748.60732
[2025-10-12 04:20:18] 2025-10-12 08:19:25,587 | INFO     | intersect: -26234334748.60732
[2025-10-12 04:20:18] 2025-10-12 08:19:25,588 | INFO     | chi2: 1.7996388811239845
[2025-10-12 04:20:18] 2025-10-12 08:19:25,588 | INFO     | current chi2=1.7996388811239845 (change=-0.03330891670049591 %)
[2025-10-12 04:20:18] 2025-10-12 08:19:25,588 | INFO     | right removable region: 232
[2025-10-12 04:20:18] 2025-10-12 08:19:25,588 | INFO     | sum of square deviations: 4180147852.289919
[2025-10-12 04:20:18] 2025-10-12 08:19:25,590 | INFO     | sum of deviations: -1626384375.0125961
[2025-10-12 04:20:18] 2025-10-12 08:19:25,590 | INFO     | mean x: 1760249889.054622
[2025-10-12 04:20:18] 2025-10-12 08:19:25,590 | INFO     | mean y: 2689300.693277311
[2025-10-12 04:20:18] 2025-10-12 08:19:25,591 | INFO     | -- intersect: 687555725.718843
[2025-10-12 04:20:18] 2025-10-12 08:19:25,591 | INFO     | intersect: 687555725.718843
[2025-10-12 04:20:18] 2025-10-12 08:19:25,591 | INFO     | chi2: 0.882212673015348
[2025-10-12 04:20:18] 2025-10-12 08:19:25,591 | INFO     | current chi2=0.882212673015348 (change=64.75151976525382 %)
[2025-10-12 04:20:18] 2025-10-12 08:19:25,592 | INFO     | sum of square deviations: 3922139963.21888
[2025-10-12 04:20:18] 2025-10-12 08:19:25,593 | INFO     | sum of deviations: -18076821201.103004
[2025-10-12 04:20:18] 2025-10-12 08:19:25,594 | INFO     | mean x: 1760250041.5665236
[2025-10-12 04:20:18] 2025-10-12 08:19:25,594 | INFO     | mean y: 2699025.909871245
[2025-10-12 04:20:18] 2025-10-12 08:19:25,594 | INFO     | -- intersect: 8115547004.062566
[2025-10-12 04:20:18] 2025-10-12 08:19:25,594 | INFO     | intersect: 8115547004.062566
[2025-10-12 04:20:18] 2025-10-12 08:19:25,595 | INFO     | chi2: 0.7363236924094423
[2025-10-12 04:20:18] 2025-10-12 08:19:25,595 | INFO     | current chi2=0.7363236924094423 (change=16.536713319620116 %)
[2025-10-12 04:20:18] 2025-10-12 08:19:25,595 | INFO     | left removable region: 20
[2025-10-12 04:20:18] 2025-10-12 08:19:25,595 | INFO     | sum of square deviations: 2954292422.113207
[2025-10-12 04:20:18] 2025-10-12 08:19:25,597 | INFO     | sum of deviations: -5499481073.547169
[2025-10-12 04:20:18] 2025-10-12 08:19:25,597 | INFO     | mean x: 1760250011.0943396
[2025-10-12 04:20:18] 2025-10-12 08:19:25,597 | INFO     | mean y: 2710174.3773584906
[2025-10-12 04:20:18] 2025-10-12 08:19:25,597 | INFO     | -- intersect: 3279454733.6718903
[2025-10-12 04:20:18] 2025-10-12 08:19:25,597 | INFO     | intersect: 3279454733.6718903
[2025-10-12 04:20:18] 2025-10-12 08:19:25,598 | INFO     | chi2: 0.012356928727737288
[2025-10-12 04:20:18] 2025-10-12 08:19:25,598 | INFO     | -- intersect: 3279454733.6718903
[2025-10-12 04:20:18] 2025-10-12 08:19:25,598 | INFO     | current memory leak: -1.86 B/s (using 212 data points, chi2=0.01)
[2025-10-12 04:20:18] 2025-10-12 08:19:25,599 | INFO     | could have reported an average CPU frequency of 2601 MHz (12 samples)
[2025-10-12 04:20:18] 2025-10-12 08:19:25,599 | INFO     | ..............................
[2025-10-12 04:20:18] 2025-10-12 08:19:25,599 | INFO     | . Timing measurements:
[2025-10-12 04:20:18] 2025-10-12 08:19:25,599 | INFO     | . get job = 0 s
[2025-10-12 04:20:18] 2025-10-12 08:19:25,599 | INFO     | . initial setup = 3 s
[2025-10-12 04:20:18] 2025-10-12 08:19:25,599 | INFO     | . payload setup = 13 s
[2025-10-12 04:20:18] 2025-10-12 08:19:25,599 | INFO     | . stage-in = 0 s
[2025-10-12 04:20:18] 2025-10-12 08:19:25,599 | INFO     | . payload execution = 14795 s
[2025-10-12 04:20:18] 2025-10-12 08:19:25,600 | INFO     | . stage-out = 3 s
[2025-10-12 04:20:18] 2025-10-12 08:19:25,600 | INFO     | . log creation = 0 s
[2025-10-12 04:20:18] 2025-10-12 08:19:25,600 | INFO     | ..............................
[2025-10-12 04:20:18] 2025-10-12 08:19:25,894 | INFO     | 
[2025-10-12 04:20:18] 2025-10-12 08:19:25,895 | INFO     | job summary report
[2025-10-12 04:20:18] 2025-10-12 08:19:25,895 | INFO     | --------------------------------------------------
[2025-10-12 04:20:18] 2025-10-12 08:19:25,895 | INFO     | PanDA job id: 6838990821
[2025-10-12 04:20:18] 2025-10-12 08:19:25,895 | INFO     | task id: 46676269
[2025-10-12 04:20:18] 2025-10-12 08:19:25,895 | INFO     | errors: (none)
[2025-10-12 04:20:18] 2025-10-12 08:19:25,895 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 04:20:18] 2025-10-12 08:19:25,896 | INFO     | pilot state: finished 
[2025-10-12 04:20:18] 2025-10-12 08:19:25,896 | INFO     | transexitcode: 0
[2025-10-12 04:20:18] 2025-10-12 08:19:25,896 | INFO     | exeerrorcode: 0
[2025-10-12 04:20:18] 2025-10-12 08:19:25,896 | INFO     | exeerrordiag: 
[2025-10-12 04:20:18] 2025-10-12 08:19:25,896 | INFO     | exitcode: 0
[2025-10-12 04:20:18] 2025-10-12 08:19:25,896 | INFO     | exitmsg: OK
[2025-10-12 04:20:18] 2025-10-12 08:19:25,896 | INFO     | cpuconsumptiontime: 54173 s
[2025-10-12 04:20:18] 2025-10-12 08:19:25,896 | INFO     | nevents: 400
[2025-10-12 04:20:18] 2025-10-12 08:19:25,896 | INFO     | neventsw: 0
[2025-10-12 04:20:18] 2025-10-12 08:19:25,896 | INFO     | pid: 928299
[2025-10-12 04:20:18] 2025-10-12 08:19:25,897 | INFO     | pgrp: 928299
[2025-10-12 04:20:18] 2025-10-12 08:19:25,897 | INFO     | corecount: 12
[2025-10-12 04:20:18] 2025-10-12 08:19:25,897 | INFO     | event service: False
[2025-10-12 04:20:18] 2025-10-12 08:19:25,897 | INFO     | sizes: {0: 2348855, 1: 2348855, 11: 2349173, 14813: 2380184, 14817: 2389182, 14819: 2389238, 14838: 2389560}
[2025-10-12 04:20:18] 2025-10-12 08:19:25,897 | INFO     | --------------------------------------------------
[2025-10-12 04:20:18] 2025-10-12 08:19:25,897 | INFO     | 
[2025-10-12 04:20:18] 2025-10-12 08:19:25,897 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-12 04:20:18] 2025-10-12 08:19:25,934 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 04:20:18] 2025-10-12 08:19:25,934 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 04:20:18] 2025-10-12 08:19:25,934 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 04:20:18] 2025-10-12 08:19:25,935 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 04:20:18] 2025-10-12 08:19:25,935 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 04:20:18] 2025-10-12 08:19:25,935 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 04:20:18] 2025-10-12 08:19:25,935 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 04:20:18] 2025-10-12 08:19:25,935 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 04:20:18] 2025-10-12 08:19:25,935 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 04:20:18] 2025-10-12 08:19:25,935 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 04:20:18] 2025-10-12 08:19:25,935 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 04:20:18] 2025-10-12 08:19:25,935 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 04:20:18] 2025-10-12 08:19:25,936 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 04:20:18] 2025-10-12 08:19:25,936 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 04:20:18] 2025-10-12 08:19:25,936 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 04:20:18] 2025-10-12 08:19:25,936 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 04:20:18] 2025-10-12 08:19:25,936 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 04:20:18] 2025-10-12 08:19:25,936 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 04:20:18] 2025-10-12 08:19:25,936 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 04:20:18] 2025-10-12 08:19:25,936 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 04:20:18] 2025-10-12 08:19:25,937 | INFO     | job 6838990821 has completed (purged errors)
[2025-10-12 04:20:18] 2025-10-12 08:19:25,941 | INFO     | overall cleanup function is called
[2025-10-12 04:20:18] 2025-10-12 08:19:26,963 | INFO     | --- collectZombieJob: --- 10, [928299]
[2025-10-12 04:20:18] 2025-10-12 08:19:26,963 | INFO     | zombie collector waiting for pid 928299
[2025-10-12 04:20:18] 2025-10-12 08:19:26,963 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 04:20:18] 2025-10-12 08:19:26,963 | INFO     | collected zombie processes
[2025-10-12 04:20:18] 2025-10-12 08:19:26,964 | INFO     | will attempt to kill all subprocesses of pid=928299
[2025-10-12 04:20:18] 2025-10-12 08:19:27,410 | INFO     | process IDs to be killed: [928299] (in reverse order)
[2025-10-12 04:20:18] 2025-10-12 08:19:27,615 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 04:20:18] 2025-10-12 08:19:27,616 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 04:20:18] 2025-10-12 08:19:27,629 | INFO     | did not find any defunct processes belonging to 928299
[2025-10-12 04:20:18] 2025-10-12 08:19:27,644 | INFO     | did not find any defunct processes belonging to 928299
[2025-10-12 04:20:18] 2025-10-12 08:19:27,645 | INFO     | ready for new job
[2025-10-12 04:20:18] 2025-10-12 08:19:27,645 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 04:20:18] 2025-10-12 08:19:27,647 | INFO     | ***************************************
[2025-10-12 04:20:18] 2025-10-12 08:19:27,647 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 04:20:18] 2025-10-12 08:19:27,648 | INFO     | ***************************************
[2025-10-12 04:20:18] 2025-10-12 08:19:27,652 | INFO     | 
[2025-10-12 04:20:18] 2025-10-12 08:19:27,654 | INFO     | architecture information:
[2025-10-12 04:20:18] 2025-10-12 08:19:27,658 | INFO     | executing command: cat /etc/os-release
[2025-10-12 04:20:18] 2025-10-12 08:19:27,734 | INFO     | cat /etc/os-release:
[2025-10-12 04:20:18] NAME="CentOS Linux"
[2025-10-12 04:20:18] VERSION="7 (Core)"
[2025-10-12 04:20:18] ID="centos"
[2025-10-12 04:20:18] ID_LIKE="rhel fedora"
[2025-10-12 04:20:18] VERSION_ID="7"
[2025-10-12 04:20:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 04:20:18] ANSI_COLOR="0;31"
[2025-10-12 04:20:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 04:20:18] HOME_URL="https://www.centos.org/"
[2025-10-12 04:20:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 04:20:18] 
[2025-10-12 04:20:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 04:20:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 04:20:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 04:20:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 04:20:18] 
[2025-10-12 04:20:18] 2025-10-12 08:19:27,735 | INFO     | ***************************************
[2025-10-12 04:20:18] 2025-10-12 08:19:28,239 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-12 04:20:18] 2025-10-12 08:19:28,304 | INFO     | sufficient remaining disk space (53113520128 B)
[2025-10-12 04:20:18] 2025-10-12 08:19:28,304 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 04:20:18] 2025-10-12 08:19:28,305 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 04:20:18] 2025-10-12 08:19:28,305 | INFO     | update_server=False
[2025-10-12 04:20:18] 2025-10-12 08:19:28,305 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 04:20:18] 2025-10-12 08:19:28,310 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 04:20:18] 2025-10-12 08:19:28,311 | INFO     | aborting loop
[2025-10-12 04:20:18] 2025-10-12 08:19:28,329 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 04:20:18] 2025-10-12 08:19:28,797 | INFO     | all payload control threads have been joined
[2025-10-12 04:20:18] 2025-10-12 08:19:28,809 | INFO     | all job control threads have been joined
[2025-10-12 04:20:18] 2025-10-12 08:19:28,993 | INFO     | all data control threads have been joined
[2025-10-12 04:20:18] 2025-10-12 08:19:29,311 | INFO     | [job] retrieve thread has finished
[2025-10-12 04:20:18] 2025-10-12 08:19:29,317 | INFO     | [job] job monitor thread has finished
[2025-10-12 04:20:18] 2025-10-12 08:19:29,367 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 04:20:18] 2025-10-12 08:19:29,803 | INFO     | [payload] control thread has finished
[2025-10-12 04:20:18] 2025-10-12 08:19:29,814 | INFO     | [job] control thread has finished
[2025-10-12 04:20:18] 2025-10-12 08:19:29,930 | INFO     | [job] validate thread has finished
[2025-10-12 04:20:18] 2025-10-12 08:19:29,994 | INFO     | [payload] validate_post thread has finished
[2025-10-12 04:20:18] 2025-10-12 08:19:30,000 | INFO     | [data] control thread has finished
[2025-10-12 04:20:18] 2025-10-12 08:19:30,047 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 04:20:18] 2025-10-12 08:19:30,178 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 04:20:18] 2025-10-12 08:19:30,239 | INFO     | [data] copytool_in thread has finished
[2025-10-12 04:20:18] 2025-10-12 08:19:30,336 | INFO     | [data] copytool_out thread has finished
[2025-10-12 04:20:18] 2025-10-12 08:19:30,867 | INFO     | [payload] failed_post thread has finished
[2025-10-12 04:20:18] 2025-10-12 08:19:30,909 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 04:20:18] 2025-10-12 08:19:31,011 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 04:20:18] 2025-10-12 08:19:31,915 | INFO     | [job] queue monitor thread has finished
[2025-10-12 04:20:18] 2025-10-12 08:19:35,020 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 04:20:18] 2025-10-12 08:19:38,539 | INFO     | job.realtimelogging is not enabled
[2025-10-12 04:20:18] 2025-10-12 08:19:39,547 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 04:20:18] 2025-10-12 08:19:58,048 | INFO     | PID=921839 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 04:20:18] 2025-10-12 08:19:58,048 | INFO     | .. there are 7 such processes running
[2025-10-12 04:20:18] 2025-10-12 08:19:58,049 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 04:20:18] 2025-10-12 08:19:58,049 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 04:20:18] 2025-10-12 08:19:58,049 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 04:20:18] 2025-10-12 08:20:11,253 | INFO     | [monitor] cgroup control has ended
[2025-10-12 04:20:18] 2025-10-12 08:20:12,325 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140678664075072)>', '<ExcThread(monitor, started 140678029899520)>']
[2025-10-12 04:20:18] 2025-10-12 08:20:13,139 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 04:20:18] 2025-10-12 08:20:13,139 | INFO     | [monitor] control thread has ended
[2025-10-12 04:20:18] 2025-10-12 08:20:17,352 | INFO     | all workflow threads have been joined
[2025-10-12 04:20:18] 2025-10-12 08:20:17,352 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 04:20:18] 2025-10-12 08:20:17,352 | INFO     | traces error code: 0
[2025-10-12 04:20:18] 2025-10-12 08:20:17,353 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 04:20:18] 2025-10-12 08:20:17,927 [wrapper] ==== pilot stdout END ====
[2025-10-12 04:20:18] 2025-10-12 08:20:18,033 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 04:20:18] 2025-10-12 08:20:18,064 [wrapper] pilotpid: 921839
[2025-10-12 04:20:18] 2025-10-12 08:20:18,067 [wrapper] Pilot exit status: 0
[2025-10-12 04:20:18] 2025-10-12 08:20:18,087 [wrapper] pandaids: 6838990821
[2025-10-12 04:20:18] 2025-10-12 08:20:18,288 [wrapper] cleanup supervisor_pilot 1298826 921840
[2025-10-12 04:20:18] 2025-10-12 08:20:18,390 [wrapper] Test setup, not cleaning
[2025-10-12 04:20:18] 2025-10-12 08:20:18,428 [wrapper] apfmon messages muted
[2025-10-12 04:20:18] 2025-10-12 08:20:18,513 [wrapper] ==== wrapper stdout END ====
[2025-10-12 04:20:18] 2025-10-12 08:20:18,518 [wrapper] ==== wrapper stderr END ====
[2025-10-12 04:20:18]  *** Error codes and diagnostics ***
[2025-10-12 04:20:18]     "exeErrorCode": 0,
[2025-10-12 04:20:18]     "exeErrorDiag": "",
[2025-10-12 04:20:18]     "pilotErrorCode": 0,
[2025-10-12 04:20:18]     "pilotErrorDiag": "",
[2025-10-12 04:20:18]  *** Listing of results directory ***
[2025-10-12 04:20:18] total 416892
[2025-10-12 04:20:18] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 18:51 pilot3.tar.gz
[2025-10-12 04:20:18] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 18:56 queuedata.json
[2025-10-12 04:20:18] -rwx------. 1 boincer umatlas     36292 Oct 11 18:56 runpilot2-wrapper.sh
[2025-10-12 04:20:18] -rw-r--r--. 1 boincer umatlas       100 Oct 12 00:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 04:20:18] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 00:11 run_atlas
[2025-10-12 04:20:18] -rw-r--r--. 1 boincer umatlas       105 Oct 12 00:11 job.xml
[2025-10-12 04:20:18] -rw-r--r--. 2 boincer umatlas 220585407 Oct 12 00:11 EVNT.46676267._002672.pool.root.1
[2025-10-12 04:20:18] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 00:11 shared
[2025-10-12 04:20:18] -rw-r--r--. 2 boincer umatlas    569679 Oct 12 00:11 input.tar.gz
[2025-10-12 04:20:18] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:11 start_atlas.sh
[2025-10-12 04:20:18] -rw-r--r--. 1 boincer umatlas         0 Oct 12 00:11 boinc_lockfile
[2025-10-12 04:20:18] -rw-r--r--. 1 boincer umatlas      2549 Oct 12 00:11 pandaJob.out
[2025-10-12 04:20:18] -rw-------. 1 boincer umatlas    975512 Oct 12 00:11 agis_schedconf.cvmfs.json
[2025-10-12 04:20:18] drwx------. 5 boincer umatlas      4096 Oct 12 00:11 pilot3
[2025-10-12 04:20:18] -rw-r--r--. 1 boincer umatlas      6657 Oct 12 04:09 init_data.xml
[2025-10-12 04:20:18] -rw-------. 1 boincer umatlas 197451296 Oct 12 04:18 HITS.46676269._066310.pool.root.1
[2025-10-12 04:20:18] -rw-r--r--. 1 boincer umatlas       531 Oct 12 04:18 boinc_task_state.xml
[2025-10-12 04:20:18] -rw-------. 1 boincer umatlas      1045 Oct 12 04:18 memory_monitor_summary.json
[2025-10-12 04:20:18] -rw-------. 1 boincer umatlas   1560580 Oct 12 04:19 agis_ddmendpoints.agis.ALL.json
[2025-10-12 04:20:18] -rw-------. 1 boincer umatlas    516671 Oct 12 04:19 log.46676269._066310.job.log.tgz.1
[2025-10-12 04:20:18] -rw-------. 1 boincer umatlas        95 Oct 12 04:19 pilot_heartbeat.json
[2025-10-12 04:20:18] -rw-------. 1 boincer umatlas      7828 Oct 12 04:19 heartbeat.json
[2025-10-12 04:20:18] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 04:20 boinc_mmap_file
[2025-10-12 04:20:18] -rw-r--r--. 1 boincer umatlas        28 Oct 12 04:20 wrapper_checkpoint.txt
[2025-10-12 04:20:18] -rw-------. 1 boincer umatlas      4894 Oct 12 04:20 pilotlog.txt
[2025-10-12 04:20:18] -rw-------. 1 boincer umatlas   1962254 Oct 12 04:20 log.46676269._066310.job.log.1
[2025-10-12 04:20:18] -rw-------. 1 boincer umatlas       357 Oct 12 04:20 output.list
[2025-10-12 04:20:18] -rw-r--r--. 1 boincer umatlas       620 Oct 12 04:20 runtime_log
[2025-10-12 04:20:18] -rw-------. 1 boincer umatlas   2498560 Oct 12 04:20 result.tar.gz
[2025-10-12 04:20:18] -rw-r--r--. 1 boincer umatlas      8701 Oct 12 04:20 runtime_log.err
[2025-10-12 04:20:18] -rw-------. 1 boincer umatlas       655 Oct 12 04:20 H2YLDmFhxR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmIjSMDmOTHpgm.diag
[2025-10-12 04:20:18] -rw-r--r--. 1 boincer umatlas     20956 Oct 12 04:20 stderr.txt
[2025-10-12 04:20:18] HITS file was successfully produced:
[2025-10-12 04:20:18] -rw-------. 1 boincer umatlas 197451296 Oct 12 04:18 shared/HITS.pool.root.1
[2025-10-12 04:20:18]  *** Contents of shared directory: ***
[2025-10-12 04:20:18] total 411260
[2025-10-12 04:20:18] -rw-r--r--. 2 boincer umatlas 220585407 Oct 12 00:11 ATLAS.root_0
[2025-10-12 04:20:18] -rw-r--r--. 2 boincer umatlas    569679 Oct 12 00:11 input.tar.gz
[2025-10-12 04:20:18] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:11 start_atlas.sh
[2025-10-12 04:20:18] -rw-------. 1 boincer umatlas 197451296 Oct 12 04:18 HITS.pool.root.1
[2025-10-12 04:20:18] -rw-------. 1 boincer umatlas   2498560 Oct 12 04:20 result.tar.gz
04:20:19 (918166): run_atlas exited; CPU time 54416.279378
04:20:19 (918166): called boinc_finish(0)

</stderr_txt>
]]>

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