Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:31 (278744): wrapper (7.7.26015): starting
00:03:31 (278744): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 00:03:31] Arguments: --nthreads 8
[2025-10-12 00:03:31] Threads: 8
[2025-10-12 00:03:31] Checking for CVMFS
[2025-10-12 00:03:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 00:03:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 00:03:33] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 00:03:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 00:03:34] 2.13.2.0 231297 52155 360184 151606 1 598 34940370 40960001 24557 16776704 0 132451307 99.636 127805129 29322 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 00:03:34] CVMFS is ok
[2025-10-12 00:03:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 00:03:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 00:03:34] Further information can be found at the LHC@home message board.
[2025-10-12 00:03:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 00:03:34] Checking for apptainer binary...
[2025-10-12 00:03:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 00:03:34] Running /usr/bin/apptainer --version
[2025-10-12 00:03:34] apptainer version 1.4.3-1.el9
[2025-10-12 00:03:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 00:03:35] c6-5-7-4.aglt2.org
[2025-10-12 00:03:35] apptainer works
[2025-10-12 00:03:35] Set ATHENA_PROC_NUMBER=8
[2025-10-12 00:03:35] Set ATHENA_CORE_NUMBER=8
[2025-10-12 00:03:35] Starting ATLAS job with PandaID=6839241567
[2025-10-12 00:03:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 10:29:37]  *** The last 200 lines of the pilot log: ***
[2025-10-12 10:29:37] 2025-10-12 14:15:34,747 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-12 10:29:37] 2025-10-12 14:15:34,822 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2903.3125714285716
[2025-10-12 10:29:37] 2025-10-12 14:15:34,858 | INFO     | using path: /tmp/boinchome/slots/6/PanDA_Pilot-6839241567/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 10:29:37] 2025-10-12 14:15:34,896 | INFO     | extracted standard info from prmon json
[2025-10-12 10:29:37] 2025-10-12 14:15:34,896 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 10:29:37] 2025-10-12 14:15:34,896 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 10:29:37] 2025-10-12 14:15:34,897 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 10:29:37] 2025-10-12 14:15:34,897 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 10:29:37] 2025-10-12 14:15:34,967 | INFO     | fitting pss+swap vs Time
[2025-10-12 10:29:37] 2025-10-12 14:15:34,968 | INFO     | sum of square deviations: 65975725636.12401
[2025-10-12 10:29:37] 2025-10-12 14:15:35,145 | INFO     | sum of deviations: 347185991904.3325
[2025-10-12 10:29:37] 2025-10-12 14:15:35,145 | INFO     | mean x: 1760260288.3634841
[2025-10-12 10:29:37] 2025-10-12 14:15:35,146 | INFO     | mean y: 2471636.6666666665
[2025-10-12 10:29:37] 2025-10-12 14:15:35,146 | INFO     | -- intersect: -9260597595.733917
[2025-10-12 10:29:37] 2025-10-12 14:15:35,146 | INFO     | intersect: -9260597595.733917
[2025-10-12 10:29:37] 2025-10-12 14:15:35,146 | INFO     | chi2: 4.567028582935813
[2025-10-12 10:29:37] 2025-10-12 14:15:35,147 | INFO     | sum of square deviations: 64331891230.45771
[2025-10-12 10:29:37] 2025-10-12 14:15:35,346 | INFO     | sum of deviations: 383699907538.07745
[2025-10-12 10:29:37] 2025-10-12 14:15:35,348 | INFO     | mean x: 1760260135.866554
[2025-10-12 10:29:37] 2025-10-12 14:15:35,348 | INFO     | mean y: 2474998.1655405406
[2025-10-12 10:29:37] 2025-10-12 14:15:35,348 | INFO     | -- intersect: -10496387050.758478
[2025-10-12 10:29:37] 2025-10-12 14:15:35,348 | INFO     | intersect: -10496387050.758478
[2025-10-12 10:29:37] 2025-10-12 14:15:35,349 | INFO     | chi2: 3.7350628196522386
[2025-10-12 10:29:37] 2025-10-12 14:15:35,349 | INFO     | current chi2=3.7350628196522386 (change=18.216784681228415 %)
[2025-10-12 10:29:37] 2025-10-12 14:15:35,349 | INFO     | right removable region: 591
[2025-10-12 10:29:37] 2025-10-12 14:15:35,349 | INFO     | sum of square deviations: 64331758860.45772
[2025-10-12 10:29:37] 2025-10-12 14:15:35,417 | INFO     | time since job start (36620s) is within the limit (172800.0s)
[2025-10-12 10:29:37] 2025-10-12 14:15:35,539 | INFO     | sum of deviations: 170156692195.30212
[2025-10-12 10:29:37] 2025-10-12 14:15:35,539 | INFO     | mean x: 1760260440.866554
[2025-10-12 10:29:37] 2025-10-12 14:15:35,539 | INFO     | mean y: 2488042.535472973
[2025-10-12 10:29:37] 2025-10-12 14:15:35,539 | INFO     | -- intersect: -4653378660.406495
[2025-10-12 10:29:37] 2025-10-12 14:15:35,540 | INFO     | intersect: -4653378660.406495
[2025-10-12 10:29:37] 2025-10-12 14:15:35,540 | INFO     | chi2: 1.2953184748358062
[2025-10-12 10:29:37] 2025-10-12 14:15:35,540 | INFO     | current chi2=1.2953184748358062 (change=71.63760963363318 %)
[2025-10-12 10:29:37] 2025-10-12 14:15:35,541 | INFO     | sum of square deviations: 62715399830.251816
[2025-10-12 10:29:37] 2025-10-12 14:15:35,798 | INFO     | sum of deviations: 121656154854.20451
[2025-10-12 10:29:37] 2025-10-12 14:15:35,798 | INFO     | mean x: 1760260593.366269
[2025-10-12 10:29:37] 2025-10-12 14:15:35,798 | INFO     | mean y: 2492615.1618398638
[2025-10-12 10:29:37] 2025-10-12 14:15:35,799 | INFO     | -- intersect: -3412083962.6793113
[2025-10-12 10:29:37] 2025-10-12 14:15:35,799 | INFO     | intersect: -3412083962.6793113
[2025-10-12 10:29:37] 2025-10-12 14:15:35,799 | INFO     | chi2: 1.0840981449894425
[2025-10-12 10:29:37] 2025-10-12 14:15:35,800 | INFO     | current chi2=1.0840981449894425 (change=16.30643999524039 %)
[2025-10-12 10:29:37] 2025-10-12 14:15:35,800 | INFO     | left removable region: 20
[2025-10-12 10:29:37] 2025-10-12 14:15:35,800 | INFO     | sum of square deviations: 57725449157.02973
[2025-10-12 10:29:37] 2025-10-12 14:15:35,844 | INFO     | sum of deviations: 101693765155.68654
[2025-10-12 10:29:37] 2025-10-12 14:15:35,845 | INFO     | mean x: 1760260715.369527
[2025-10-12 10:29:37] 2025-10-12 14:15:35,846 | INFO     | mean y: 2501832.5796847637
[2025-10-12 10:29:37] 2025-10-12 14:15:35,846 | INFO     | -- intersect: -3098514138.9828367
[2025-10-12 10:29:37] 2025-10-12 14:15:35,846 | INFO     | intersect: -3098514138.9828367
[2025-10-12 10:29:37] 2025-10-12 14:15:35,846 | INFO     | chi2: 0.0964726957125618
[2025-10-12 10:29:37] 2025-10-12 14:15:35,847 | INFO     | -- intersect: -3098514138.9828367
[2025-10-12 10:29:37] 2025-10-12 14:15:35,847 | INFO     | current memory leak: 1.76 B/s (using 571 data points, chi2=0.10)
[2025-10-12 10:29:37] 2025-10-12 14:15:35,847 | INFO     | could have reported an average CPU frequency of 2839 MHz (23 samples)
[2025-10-12 10:29:37] 2025-10-12 14:15:35,856 | INFO     | ..............................
[2025-10-12 10:29:37] 2025-10-12 14:15:35,856 | INFO     | . Timing measurements:
[2025-10-12 10:29:37] 2025-10-12 14:15:35,856 | INFO     | . get job = 0 s
[2025-10-12 10:29:37] 2025-10-12 14:15:35,856 | INFO     | . initial setup = 10 s
[2025-10-12 10:29:37] 2025-10-12 14:15:35,856 | INFO     | . payload setup = 59 s
[2025-10-12 10:29:37] 2025-10-12 14:15:35,856 | INFO     | . stage-in = 0 s
[2025-10-12 10:29:37] 2025-10-12 14:15:35,856 | INFO     | . payload execution = 36412 s
[2025-10-12 10:29:37] 2025-10-12 14:15:35,857 | INFO     | . stage-out = 5 s
[2025-10-12 10:29:37] 2025-10-12 14:15:35,857 | INFO     | . log creation = 0 s
[2025-10-12 10:29:37] 2025-10-12 14:15:35,857 | INFO     | ..............................
[2025-10-12 10:29:37] 2025-10-12 14:15:36,140 | INFO     | 
[2025-10-12 10:29:37] 2025-10-12 14:15:36,141 | INFO     | job summary report
[2025-10-12 10:29:37] 2025-10-12 14:15:36,141 | INFO     | --------------------------------------------------
[2025-10-12 10:29:37] 2025-10-12 14:15:36,141 | INFO     | PanDA job id: 6839241567
[2025-10-12 10:29:37] 2025-10-12 14:15:36,141 | INFO     | task id: 46676269
[2025-10-12 10:29:37] 2025-10-12 14:15:36,141 | INFO     | errors: (none)
[2025-10-12 10:29:37] 2025-10-12 14:15:36,141 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 10:29:37] 2025-10-12 14:15:36,141 | INFO     | pilot state: finished 
[2025-10-12 10:29:37] 2025-10-12 14:15:36,141 | INFO     | transexitcode: 0
[2025-10-12 10:29:37] 2025-10-12 14:15:36,141 | INFO     | exeerrorcode: 0
[2025-10-12 10:29:37] 2025-10-12 14:15:36,141 | INFO     | exeerrordiag: 
[2025-10-12 10:29:37] 2025-10-12 14:15:36,141 | INFO     | exitcode: 0
[2025-10-12 10:29:37] 2025-10-12 14:15:36,141 | INFO     | exitmsg: OK
[2025-10-12 10:29:37] 2025-10-12 14:15:36,141 | INFO     | cpuconsumptiontime: 40943 s
[2025-10-12 10:29:37] 2025-10-12 14:15:36,141 | INFO     | nevents: 400
[2025-10-12 10:29:37] 2025-10-12 14:15:36,142 | INFO     | neventsw: 0
[2025-10-12 10:29:37] 2025-10-12 14:15:36,142 | INFO     | pid: 348067
[2025-10-12 10:29:37] 2025-10-12 14:15:36,142 | INFO     | pgrp: 348067
[2025-10-12 10:29:37] 2025-10-12 14:15:36,142 | INFO     | corecount: 8
[2025-10-12 10:29:37] 2025-10-12 14:15:36,142 | INFO     | event service: False
[2025-10-12 10:29:37] 2025-10-12 14:15:36,142 | INFO     | sizes: {0: 2348686, 1: 2348885, 2: 2348913, 14: 2348913, 25: 2348941, 35: 2348969, 46: 2349415, 36476: 2389464, 36483: 2398462, 36486: 2398518, 36527: 2398712}
[2025-10-12 10:29:37] 2025-10-12 14:15:36,142 | INFO     | --------------------------------------------------
[2025-10-12 10:29:37] 2025-10-12 14:15:36,142 | INFO     | 
[2025-10-12 10:29:37] 2025-10-12 14:15:36,142 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2025-10-12 10:29:37] 2025-10-12 14:15:36,192 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 10:29:37] 2025-10-12 14:15:36,192 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 10:29:37] 2025-10-12 14:15:36,193 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 10:29:37] 2025-10-12 14:15:36,193 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 10:29:37] 2025-10-12 14:15:36,193 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 10:29:37] 2025-10-12 14:15:36,193 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 10:29:37] 2025-10-12 14:15:36,193 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 10:29:37] 2025-10-12 14:15:36,193 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 10:29:37] 2025-10-12 14:15:36,193 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 10:29:37] 2025-10-12 14:15:36,193 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 10:29:37] 2025-10-12 14:15:36,193 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 10:29:37] 2025-10-12 14:15:36,193 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 10:29:37] 2025-10-12 14:15:36,193 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 10:29:37] 2025-10-12 14:15:36,193 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 10:29:37] 2025-10-12 14:15:36,193 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 10:29:37] 2025-10-12 14:15:36,193 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 10:29:37] 2025-10-12 14:15:36,194 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 10:29:37] 2025-10-12 14:15:36,194 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 10:29:37] 2025-10-12 14:15:36,194 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 10:29:37] 2025-10-12 14:15:36,194 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 10:29:37] 2025-10-12 14:15:36,194 | INFO     | job 6839241567 has completed (purged errors)
[2025-10-12 10:29:37] 2025-10-12 14:15:36,194 | INFO     | overall cleanup function is called
[2025-10-12 10:29:37] 2025-10-12 14:15:37,202 | INFO     | --- collectZombieJob: --- 10, [348067]
[2025-10-12 10:29:37] 2025-10-12 14:15:37,202 | INFO     | zombie collector waiting for pid 348067
[2025-10-12 10:29:37] 2025-10-12 14:15:37,202 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 10:29:37] 2025-10-12 14:15:37,202 | INFO     | collected zombie processes
[2025-10-12 10:29:37] 2025-10-12 14:15:37,202 | INFO     | will attempt to kill all subprocesses of pid=348067
[2025-10-12 10:29:37] 2025-10-12 14:15:38,232 | INFO     | process IDs to be killed: [348067] (in reverse order)
[2025-10-12 10:29:37] 2025-10-12 14:15:38,866 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 10:29:37] 2025-10-12 14:15:38,867 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 10:29:37] 2025-10-12 14:15:38,923 | INFO     | did not find any defunct processes belonging to 348067
[2025-10-12 10:29:37] 2025-10-12 14:15:38,986 | INFO     | did not find any defunct processes belonging to 348067
[2025-10-12 10:29:37] 2025-10-12 14:15:39,008 | INFO     | ready for new job
[2025-10-12 10:29:37] 2025-10-12 14:15:39,008 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 10:29:37] 2025-10-12 14:15:39,011 | INFO     | ***************************************
[2025-10-12 10:29:37] 2025-10-12 14:15:39,011 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 10:29:37] 2025-10-12 14:15:39,011 | INFO     | ***************************************
[2025-10-12 10:29:37] 2025-10-12 14:15:39,011 | INFO     | 
[2025-10-12 10:29:37] 2025-10-12 14:15:39,023 | INFO     | architecture information:
[2025-10-12 10:29:37] 2025-10-12 14:15:39,035 | INFO     | executing command: cat /etc/os-release
[2025-10-12 10:29:37] 2025-10-12 14:15:39,073 | INFO     | cat /etc/os-release:
[2025-10-12 10:29:37] NAME="CentOS Linux"
[2025-10-12 10:29:37] VERSION="7 (Core)"
[2025-10-12 10:29:37] ID="centos"
[2025-10-12 10:29:37] ID_LIKE="rhel fedora"
[2025-10-12 10:29:37] VERSION_ID="7"
[2025-10-12 10:29:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 10:29:37] ANSI_COLOR="0;31"
[2025-10-12 10:29:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 10:29:37] HOME_URL="https://www.centos.org/"
[2025-10-12 10:29:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 10:29:37] 
[2025-10-12 10:29:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 10:29:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 10:29:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 10:29:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 10:29:37] 
[2025-10-12 10:29:37] 2025-10-12 14:15:39,073 | INFO     | ***************************************
[2025-10-12 10:29:37] 2025-10-12 14:15:39,577 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2025-10-12 10:29:37] 2025-10-12 14:15:39,629 | INFO     | sufficient remaining disk space (74202480640 B)
[2025-10-12 10:29:37] 2025-10-12 14:15:39,630 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 10:29:37] 2025-10-12 14:15:39,630 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 10:29:37] 2025-10-12 14:15:39,630 | INFO     | update_server=False
[2025-10-12 10:29:37] 2025-10-12 14:15:39,630 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 10:29:37] 2025-10-12 14:15:39,804 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 10:29:37] 2025-10-12 14:15:39,804 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 10:29:37] 2025-10-12 14:15:39,804 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 10:29:37] 2025-10-12 14:15:39,804 | INFO     | will abort loop
[2025-10-12 10:29:37] 2025-10-12 14:15:40,384 | INFO     | all data control threads have been joined
[2025-10-12 10:29:37] 2025-10-12 14:15:40,616 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 10:29:37] 2025-10-12 14:15:40,636 | INFO     | [job] retrieve thread has finished
[2025-10-12 10:29:37] 2025-10-12 14:15:40,840 | INFO     | [job] job monitor thread has finished
[2025-10-12 10:29:37] 2025-10-12 14:15:40,951 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 10:29:37] 2025-10-12 14:15:41,025 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 10:29:37] 2025-10-12 14:15:41,026 | INFO     | [data] copytool_in thread has finished
[2025-10-12 10:29:37] 2025-10-12 14:15:41,147 | INFO     | all payload control threads have been joined
[2025-10-12 10:29:37] 2025-10-12 14:15:41,174 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 10:29:37] 2025-10-12 14:15:41,334 | INFO     | all job control threads have been joined
[2025-10-12 10:29:37] 2025-10-12 14:15:41,397 | INFO     | [data] control thread has finished
[2025-10-12 10:29:37] 2025-10-12 14:15:41,625 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 10:29:37] 2025-10-12 14:15:41,635 | INFO     | [payload] validate_post thread has finished
[2025-10-12 10:29:37] 2025-10-12 14:15:41,914 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 10:29:37] 2025-10-12 14:15:41,914 | INFO     | [job] validate thread has finished
[2025-10-12 10:29:37] 2025-10-12 14:15:41,921 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 10:29:37] 2025-10-12 14:15:42,153 | INFO     | [payload] control thread has finished
[2025-10-12 10:29:37] 2025-10-12 14:15:42,179 | INFO     | [job] queue monitor thread has finished
[2025-10-12 10:29:37] 2025-10-12 14:15:42,237 | INFO     | [payload] failed_post thread has finished
[2025-10-12 10:29:37] 2025-10-12 14:15:42,366 | INFO     | [job] control thread has finished
[2025-10-12 10:29:37] 2025-10-12 14:15:42,623 | INFO     | [data] copytool_out thread has finished
[2025-10-12 10:29:37] 2025-10-12 14:15:45,673 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 10:29:37] 2025-10-12 14:16:12,014 | INFO     | PID=297278 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 10:29:37] 2025-10-12 14:16:12,015 | INFO     | .. there are 31 such processes running
[2025-10-12 10:29:37] 2025-10-12 14:16:12,051 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 10:29:37] 2025-10-12 14:16:12,052 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 10:29:37] 2025-10-12 14:16:12,052 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 10:29:37] 2025-10-12 14:16:26,910 | INFO     | [monitor] cgroup control has ended
[2025-10-12 10:29:37] 2025-10-12 14:16:27,413 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139928730310464)>', '<ExcThread(monitor, started 139928373532416)>']
[2025-10-12 10:29:37] 2025-10-12 14:16:28,252 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 10:29:37] 2025-10-12 14:16:28,252 | INFO     | [monitor] control thread has ended
[2025-10-12 10:29:37] 2025-10-12 14:16:32,439 | INFO     | all workflow threads have been joined
[2025-10-12 10:29:37] 2025-10-12 14:16:32,439 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 10:29:37] 2025-10-12 14:16:32,439 | INFO     | traces error code: 0
[2025-10-12 10:29:37] 2025-10-12 14:16:32,439 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 10:29:37] 2025-10-12 14:16:33,084 [wrapper] ==== pilot stdout END ====
[2025-10-12 10:29:37] 2025-10-12 14:16:33,115 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 10:29:37] 2025-10-12 14:16:33,141 [wrapper] pilotpid: 297278
[2025-10-12 10:29:37] 2025-10-12 14:16:33,174 [wrapper] Pilot exit status: 0
[2025-10-12 10:29:37] 2025-10-12 14:16:33,429 [wrapper] pandaids: 6839241567
[2025-10-12 10:29:37] 2025-10-12 14:16:33,916 [wrapper] cleanup supervisor_pilot 2120842 297280
[2025-10-12 10:29:37] 2025-10-12 14:16:33,946 [wrapper] Test setup, not cleaning
[2025-10-12 10:29:37] 2025-10-12 14:16:33,985 [wrapper] apfmon messages muted
[2025-10-12 10:29:37] 2025-10-12 14:16:34,005 [wrapper] ==== wrapper stdout END ====
[2025-10-12 10:29:37] 2025-10-12 14:16:34,009 [wrapper] ==== wrapper stderr END ====
[2025-10-12 10:29:37]  *** Error codes and diagnostics ***
[2025-10-12 10:29:37]     "exeErrorCode": 0,
[2025-10-12 10:29:37]     "exeErrorDiag": "",
[2025-10-12 10:29:37]     "pilotErrorCode": 0,
[2025-10-12 10:29:37]     "pilotErrorDiag": "",
[2025-10-12 10:29:37]  *** Listing of results directory ***
[2025-10-12 10:29:37] total 409112
[2025-10-12 10:29:37] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 21:26 pilot3.tar.gz
[2025-10-12 10:29:37] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 21:43 queuedata.json
[2025-10-12 10:29:37] -rwx------. 1 boincer umatlas     36292 Oct 11 21:44 runpilot2-wrapper.sh
[2025-10-12 10:29:37] -rw-r--r--. 1 boincer umatlas       100 Oct 12 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 10:29:37] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 00:03 run_atlas
[2025-10-12 10:29:37] -rw-r--r--. 1 boincer umatlas       105 Oct 12 00:03 job.xml
[2025-10-12 10:29:37] -rw-r--r--. 2 boincer umatlas 220039165 Oct 12 00:03 EVNT.46676267._003159.pool.root.1
[2025-10-12 10:29:37] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:03 start_atlas.sh
[2025-10-12 10:29:37] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 00:03 shared
[2025-10-12 10:29:37] -rw-r--r--. 2 boincer umatlas    569681 Oct 12 00:03 input.tar.gz
[2025-10-12 10:29:37] -rw-r--r--. 1 boincer umatlas         0 Oct 12 00:03 boinc_lockfile
[2025-10-12 10:29:37] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 00:03 pandaJob.out
[2025-10-12 10:29:37] -rw-------. 1 boincer umatlas    975512 Oct 12 00:05 agis_schedconf.cvmfs.json
[2025-10-12 10:29:37] drwx------. 5 boincer umatlas      4096 Oct 12 00:05 pilot3
[2025-10-12 10:29:37] -rw-------. 1 boincer umatlas 185278068 Oct 12 10:13 HITS.46676269._068796.pool.root.1
[2025-10-12 10:29:37] -rw-r--r--. 1 boincer umatlas       530 Oct 12 10:13 boinc_task_state.xml
[2025-10-12 10:29:37] -rw-------. 1 boincer umatlas      1042 Oct 12 10:14 memory_monitor_summary.json
[2025-10-12 10:29:37] -rw-------. 1 boincer umatlas   1560580 Oct 12 10:14 agis_ddmendpoints.agis.ALL.json
[2025-10-12 10:29:37] -rw-------. 1 boincer umatlas    723855 Oct 12 10:14 log.46676269._068796.job.log.tgz.1
[2025-10-12 10:29:37] -rw-------. 1 boincer umatlas      7822 Oct 12 10:15 heartbeat.json
[2025-10-12 10:29:37] -rw-------. 1 boincer umatlas        95 Oct 12 10:16 pilot_heartbeat.json
[2025-10-12 10:29:37] -rw-------. 1 boincer umatlas      5009 Oct 12 10:16 pilotlog.txt
[2025-10-12 10:29:37] -rw-------. 1 boincer umatlas   4135820 Oct 12 10:16 log.46676269._068796.job.log.1
[2025-10-12 10:29:37] -rw-------. 1 boincer umatlas       357 Oct 12 10:16 output.list
[2025-10-12 10:29:37] -rw-r--r--. 1 boincer umatlas       620 Oct 12 10:16 runtime_log
[2025-10-12 10:29:37] -rw-------. 1 boincer umatlas   4874240 Oct 12 10:16 result.tar.gz
[2025-10-12 10:29:37] -rw-r--r--. 1 boincer umatlas      8704 Oct 12 10:16 runtime_log.err
[2025-10-12 10:29:37] -rw-------. 1 boincer umatlas       658 Oct 12 10:16 qzqMDmFJ0R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmBySMDmrDPV9n.diag
[2025-10-12 10:29:37] -rw-r--r--. 1 boincer umatlas      6841 Oct 12 10:27 init_data.xml
[2025-10-12 10:29:37] -rw-r--r--. 1 boincer umatlas        27 Oct 12 10:29 wrapper_checkpoint.txt
[2025-10-12 10:29:37] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 10:29 boinc_mmap_file
[2025-10-12 10:29:37] -rw-r--r--. 1 boincer umatlas     21217 Oct 12 10:29 stderr.txt
[2025-10-12 10:29:37] HITS file was successfully produced:
[2025-10-12 10:29:37] -rw-------. 1 boincer umatlas 185278068 Oct 12 10:13 shared/HITS.pool.root.1
[2025-10-12 10:29:37]  *** Contents of shared directory: ***
[2025-10-12 10:29:37] total 401160
[2025-10-12 10:29:37] -rw-r--r--. 2 boincer umatlas 220039165 Oct 12 00:03 ATLAS.root_0
[2025-10-12 10:29:37] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:03 start_atlas.sh
[2025-10-12 10:29:37] -rw-r--r--. 2 boincer umatlas    569681 Oct 12 00:03 input.tar.gz
[2025-10-12 10:29:37] -rw-------. 1 boincer umatlas 185278068 Oct 12 10:13 HITS.pool.root.1
[2025-10-12 10:29:37] -rw-------. 1 boincer umatlas   4874240 Oct 12 10:16 result.tar.gz
10:29:39 (278744): run_atlas exited; CPU time 42271.204522
10:29:39 (278744): called boinc_finish(0)

</stderr_txt>
]]>

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