Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:53 (4100832): wrapper (7.7.26015): starting
00:03:53 (4100832): wrapper: running run_atlas (--nthreads 9)
[2025-10-12 00:03:53] Arguments: --nthreads 9
[2025-10-12 00:03:53] Threads: 9
[2025-10-12 00:03:53] Checking for CVMFS
[2025-10-12 00:03:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 00:03:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 00:03:54] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 00:03:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 00:03:56] 2.13.2.0 2531586 128756 807000 151606 0 255 21075156 32935936 59140 16776704 0 183751942 99.739 123102741 23449 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 00:03:56] CVMFS is ok
[2025-10-12 00:03:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 00:03:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 00:03:56] Further information can be found at the LHC@home message board.
[2025-10-12 00:03:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 00:03:56] Checking for apptainer binary...
[2025-10-12 00:03:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 00:03:56] Running /usr/bin/apptainer --version
[2025-10-12 00:03:56] apptainer version 1.4.3-1.el9
[2025-10-12 00:03:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 00:03:57] c-1-3.aglt2.org
[2025-10-12 00:03:57] apptainer works
[2025-10-12 00:03:57] Set ATHENA_PROC_NUMBER=9
[2025-10-12 00:03:57] Set ATHENA_CORE_NUMBER=9
[2025-10-12 00:03:57] Starting ATLAS job with PandaID=6839242166
[2025-10-12 00:03:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 06:38:26]  *** The last 200 lines of the pilot log: ***
[2025-10-12 06:38:26] 2025-10-12 10:37:42,359 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 06:38:26] 2025-10-12 10:37:42,428 | INFO     | fitting pss+swap vs Time
[2025-10-12 06:38:26] 2025-10-12 10:37:42,428 | INFO     | sum of square deviations: 17284284877.277435
[2025-10-12 06:38:26] 2025-10-12 10:37:42,431 | INFO     | sum of deviations: 267516299154.4921
[2025-10-12 06:38:26] 2025-10-12 10:37:42,452 | INFO     | mean x: 1760253778.1675394
[2025-10-12 06:38:26] 2025-10-12 10:37:42,452 | INFO     | mean y: 2094848.5235602094
[2025-10-12 06:38:26] 2025-10-12 10:37:42,452 | INFO     | -- intersect: -27242108753.278366
[2025-10-12 06:38:26] 2025-10-12 10:37:42,452 | INFO     | intersect: -27242108753.278366
[2025-10-12 06:38:26] 2025-10-12 10:37:42,453 | INFO     | chi2: 7.494638079644783
[2025-10-12 06:38:26] 2025-10-12 10:37:42,453 | INFO     | sum of square deviations: 16614457264.87005
[2025-10-12 06:38:26] 2025-10-12 10:37:42,462 | INFO     | sum of deviations: 312020936190.0184
[2025-10-12 06:38:26] 2025-10-12 10:37:42,462 | INFO     | mean x: 1760253625.6737401
[2025-10-12 06:38:26] 2025-10-12 10:37:42,462 | INFO     | mean y: 2104901.6180371353
[2025-10-12 06:38:26] 2025-10-12 10:37:42,462 | INFO     | -- intersect: -33055609561.06925
[2025-10-12 06:38:26] 2025-10-12 10:37:42,462 | INFO     | intersect: -33055609561.06925
[2025-10-12 06:38:26] 2025-10-12 10:37:42,463 | INFO     | chi2: 5.822286440582105
[2025-10-12 06:38:26] 2025-10-12 10:37:42,463 | INFO     | current chi2=5.822286440582105 (change=22.313974621466194 %)
[2025-10-12 06:38:26] 2025-10-12 10:37:42,463 | INFO     | right removable region: 376
[2025-10-12 06:38:26] 2025-10-12 10:37:42,463 | INFO     | sum of square deviations: 16614324772.51986
[2025-10-12 06:38:26] 2025-10-12 10:37:42,483 | INFO     | sum of deviations: 170099445773.83282
[2025-10-12 06:38:26] 2025-10-12 10:37:42,483 | INFO     | mean x: 1760253930.6763926
[2025-10-12 06:38:26] 2025-10-12 10:37:42,483 | INFO     | mean y: 2116998.3183023874
[2025-10-12 06:38:26] 2025-10-12 10:37:42,483 | INFO     | -- intersect: -18019573448.259686
[2025-10-12 06:38:26] 2025-10-12 10:37:42,483 | INFO     | intersect: -18019573448.259686
[2025-10-12 06:38:26] 2025-10-12 10:37:42,484 | INFO     | chi2: 4.135736998234624
[2025-10-12 06:38:26] 2025-10-12 10:37:42,484 | INFO     | current chi2=4.135736998234624 (change=44.81738872131578 %)
[2025-10-12 06:38:26] 2025-10-12 10:37:42,484 | INFO     | sum of square deviations: 15961922755.569836
[2025-10-12 06:38:26] 2025-10-12 10:37:42,503 | INFO     | sum of deviations: 109610187848.46236
[2025-10-12 06:38:26] 2025-10-12 10:37:42,503 | INFO     | mean x: 1760254083.1827958
[2025-10-12 06:38:26] 2025-10-12 10:37:42,503 | INFO     | mean y: 2131125.4784946237
[2025-10-12 06:38:26] 2025-10-12 10:37:42,503 | INFO     | -- intersect: -12085496641.756691
[2025-10-12 06:38:26] 2025-10-12 10:37:42,503 | INFO     | intersect: -12085496641.756691
[2025-10-12 06:38:26] 2025-10-12 10:37:42,518 | INFO     | chi2: 2.9566826099065775
[2025-10-12 06:38:26] 2025-10-12 10:37:42,518 | INFO     | current chi2=2.9566826099065775 (change=28.508930544455236 %)
[2025-10-12 06:38:26] 2025-10-12 10:37:42,519 | INFO     | sum of square deviations: 15326846080.964575
[2025-10-12 06:38:26] 2025-10-12 10:37:42,536 | INFO     | sum of deviations: 62013016970.05449
[2025-10-12 06:38:26] 2025-10-12 10:37:42,537 | INFO     | mean x: 1760254235.6866486
[2025-10-12 06:38:26] 2025-10-12 10:37:42,537 | INFO     | mean y: 2142548.174386921
[2025-10-12 06:38:26] 2025-10-12 10:37:42,537 | INFO     | -- intersect: -7119914736.971696
[2025-10-12 06:38:26] 2025-10-12 10:37:42,537 | INFO     | intersect: -7119914736.971696
[2025-10-12 06:38:26] 2025-10-12 10:37:42,537 | INFO     | chi2: 2.2457096352699093
[2025-10-12 06:38:26] 2025-10-12 10:37:42,537 | INFO     | current chi2=2.2457096352699093 (change=24.046306906750903 %)
[2025-10-12 06:38:26] 2025-10-12 10:37:42,538 | INFO     | left removable region: 30
[2025-10-12 06:38:26] 2025-10-12 10:37:42,538 | INFO     | sum of square deviations: 12843478144.789038
[2025-10-12 06:38:26] 2025-10-12 10:37:42,560 | INFO     | sum of deviations: 53222315424.33234
[2025-10-12 06:38:26] 2025-10-12 10:37:42,560 | INFO     | mean x: 1760254510.1878612
[2025-10-12 06:38:26] 2025-10-12 10:37:42,560 | INFO     | mean y: 2167727.8410404623
[2025-10-12 06:38:26] 2025-10-12 10:37:42,560 | INFO     | -- intersect: -7292181957.826665
[2025-10-12 06:38:26] 2025-10-12 10:37:42,561 | INFO     | intersect: -7292181957.826665
[2025-10-12 06:38:26] 2025-10-12 10:37:42,561 | INFO     | chi2: 0.13879363976830936
[2025-10-12 06:38:26] 2025-10-12 10:37:42,561 | INFO     | -- intersect: -7292181957.826665
[2025-10-12 06:38:26] 2025-10-12 10:37:42,561 | INFO     | current memory leak: 4.14 B/s (using 346 data points, chi2=0.14)
[2025-10-12 06:38:26] 2025-10-12 10:37:42,562 | INFO     | could have reported an average CPU frequency of 2794 MHz (16 samples)
[2025-10-12 06:38:26] 2025-10-12 10:37:42,562 | INFO     | ..............................
[2025-10-12 06:38:26] 2025-10-12 10:37:42,562 | INFO     | . Timing measurements:
[2025-10-12 06:38:26] 2025-10-12 10:37:42,562 | INFO     | . get job = 0 s
[2025-10-12 06:38:26] 2025-10-12 10:37:42,562 | INFO     | . initial setup = 9 s
[2025-10-12 06:38:26] 2025-10-12 10:37:42,563 | INFO     | . payload setup = 64 s
[2025-10-12 06:38:26] 2025-10-12 10:37:42,579 | INFO     | . stage-in = 0 s
[2025-10-12 06:38:26] 2025-10-12 10:37:42,579 | INFO     | . payload execution = 23296 s
[2025-10-12 06:38:26] 2025-10-12 10:37:42,579 | INFO     | . stage-out = 8 s
[2025-10-12 06:38:26] 2025-10-12 10:37:42,579 | INFO     | . log creation = 1 s
[2025-10-12 06:38:26] 2025-10-12 10:37:42,580 | INFO     | ..............................
[2025-10-12 06:38:26] 2025-10-12 10:37:42,964 | INFO     | 
[2025-10-12 06:38:26] 2025-10-12 10:37:42,964 | INFO     | job summary report
[2025-10-12 06:38:26] 2025-10-12 10:37:42,964 | INFO     | --------------------------------------------------
[2025-10-12 06:38:26] 2025-10-12 10:37:42,964 | INFO     | PanDA job id: 6839242166
[2025-10-12 06:38:26] 2025-10-12 10:37:42,964 | INFO     | task id: 46676269
[2025-10-12 06:38:26] 2025-10-12 10:37:42,964 | INFO     | errors: (none)
[2025-10-12 06:38:26] 2025-10-12 10:37:42,964 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 06:38:26] 2025-10-12 10:37:42,964 | INFO     | pilot state: finished 
[2025-10-12 06:38:26] 2025-10-12 10:37:42,964 | INFO     | transexitcode: 0
[2025-10-12 06:38:26] 2025-10-12 10:37:42,965 | INFO     | exeerrorcode: 0
[2025-10-12 06:38:26] 2025-10-12 10:37:42,965 | INFO     | exeerrordiag: 
[2025-10-12 06:38:26] 2025-10-12 10:37:42,965 | INFO     | exitcode: 0
[2025-10-12 06:38:26] 2025-10-12 10:37:42,965 | INFO     | exitmsg: OK
[2025-10-12 06:38:26] 2025-10-12 10:37:42,965 | INFO     | cpuconsumptiontime: 44975 s
[2025-10-12 06:38:26] 2025-10-12 10:37:42,965 | INFO     | nevents: 400
[2025-10-12 06:38:26] 2025-10-12 10:37:42,965 | INFO     | neventsw: 0
[2025-10-12 06:38:26] 2025-10-12 10:37:42,965 | INFO     | pid: 4156117
[2025-10-12 06:38:26] 2025-10-12 10:37:42,965 | INFO     | pgrp: 4156117
[2025-10-12 06:38:26] 2025-10-12 10:37:42,965 | INFO     | corecount: 9
[2025-10-12 06:38:26] 2025-10-12 10:37:42,965 | INFO     | event service: False
[2025-10-12 06:38:26] 2025-10-12 10:37:42,965 | INFO     | sizes: {0: 2348630, 1: 2348686, 2: 2348742, 3: 2348913, 4: 2348941, 15: 2348969, 26: 2349125, 37: 2349153, 49: 2349181, 57: 2349471, 60: 2349499, 23367: 2383554, 2
[2025-10-12 06:38:26] 2025-10-12 10:37:42,965 | INFO     | --------------------------------------------------
[2025-10-12 06:38:26] 2025-10-12 10:37:42,965 | INFO     | 
[2025-10-12 06:38:26] 2025-10-12 10:37:42,966 | INFO     | executing command: ls -lF /tmp/boinchome/slots/7
[2025-10-12 06:38:26] 2025-10-12 10:37:43,021 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 06:38:26] 2025-10-12 10:37:43,022 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 06:38:26] 2025-10-12 10:37:43,023 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 06:38:26] 2025-10-12 10:37:43,023 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 06:38:26] 2025-10-12 10:37:43,023 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 06:38:26] 2025-10-12 10:37:43,023 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 06:38:26] 2025-10-12 10:37:43,023 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 06:38:26] 2025-10-12 10:37:43,023 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 06:38:26] 2025-10-12 10:37:43,023 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 06:38:26] 2025-10-12 10:37:43,023 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 06:38:26] 2025-10-12 10:37:43,023 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 06:38:26] 2025-10-12 10:37:43,023 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 06:38:26] 2025-10-12 10:37:43,023 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 06:38:26] 2025-10-12 10:37:43,023 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 06:38:26] 2025-10-12 10:37:43,023 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 06:38:26] 2025-10-12 10:37:43,024 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 06:38:26] 2025-10-12 10:37:43,024 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 06:38:26] 2025-10-12 10:37:43,024 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 06:38:26] 2025-10-12 10:37:43,024 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 06:38:26] 2025-10-12 10:37:43,024 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 06:38:26] 2025-10-12 10:37:43,024 | INFO     | job 6839242166 has completed (purged errors)
[2025-10-12 06:38:26] 2025-10-12 10:37:43,024 | INFO     | overall cleanup function is called
[2025-10-12 06:38:26] 2025-10-12 10:37:44,038 | INFO     | --- collectZombieJob: --- 10, [4156117]
[2025-10-12 06:38:26] 2025-10-12 10:37:44,038 | INFO     | zombie collector waiting for pid 4156117
[2025-10-12 06:38:26] 2025-10-12 10:37:44,038 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 06:38:26] 2025-10-12 10:37:44,038 | INFO     | collected zombie processes
[2025-10-12 06:38:26] 2025-10-12 10:37:44,038 | INFO     | will attempt to kill all subprocesses of pid=4156117
[2025-10-12 06:38:26] 2025-10-12 10:37:48,643 | INFO     | process IDs to be killed: [4156117] (in reverse order)
[2025-10-12 06:38:26] 2025-10-12 10:37:49,432 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 06:38:26] 2025-10-12 10:37:49,432 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 06:38:26] 2025-10-12 10:37:49,581 | INFO     | did not find any defunct processes belonging to 4156117
[2025-10-12 06:38:26] 2025-10-12 10:37:49,712 | INFO     | did not find any defunct processes belonging to 4156117
[2025-10-12 06:38:26] 2025-10-12 10:37:49,712 | INFO     | ready for new job
[2025-10-12 06:38:26] 2025-10-12 10:37:49,712 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 06:38:26] 2025-10-12 10:37:49,727 | INFO     | ***************************************
[2025-10-12 06:38:26] 2025-10-12 10:37:49,727 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 06:38:26] 2025-10-12 10:37:49,727 | INFO     | ***************************************
[2025-10-12 06:38:26] 2025-10-12 10:37:49,727 | INFO     | 
[2025-10-12 06:38:26] 2025-10-12 10:37:49,746 | INFO     | architecture information:
[2025-10-12 06:38:26] 2025-10-12 10:37:49,766 | INFO     | executing command: cat /etc/os-release
[2025-10-12 06:38:26] 2025-10-12 10:37:49,939 | INFO     | cat /etc/os-release:
[2025-10-12 06:38:26] NAME="CentOS Linux"
[2025-10-12 06:38:26] VERSION="7 (Core)"
[2025-10-12 06:38:26] ID="centos"
[2025-10-12 06:38:26] ID_LIKE="rhel fedora"
[2025-10-12 06:38:26] VERSION_ID="7"
[2025-10-12 06:38:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 06:38:26] ANSI_COLOR="0;31"
[2025-10-12 06:38:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 06:38:26] HOME_URL="https://www.centos.org/"
[2025-10-12 06:38:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 06:38:26] 
[2025-10-12 06:38:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 06:38:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 06:38:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 06:38:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 06:38:26] 
[2025-10-12 06:38:26] 2025-10-12 10:37:49,939 | INFO     | ***************************************
[2025-10-12 06:38:26] 2025-10-12 10:37:50,445 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2025-10-12 06:38:26] 2025-10-12 10:37:50,541 | INFO     | sufficient remaining disk space (74728865792 B)
[2025-10-12 06:38:26] 2025-10-12 10:37:50,542 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 06:38:26] 2025-10-12 10:37:50,542 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 06:38:26] 2025-10-12 10:37:50,542 | INFO     | update_server=False
[2025-10-12 06:38:26] 2025-10-12 10:37:50,542 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 06:38:26] 2025-10-12 10:37:50,542 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 06:38:26] 2025-10-12 10:37:50,764 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 06:38:26] 2025-10-12 10:37:50,764 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 06:38:26] 2025-10-12 10:37:50,764 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 06:38:26] 2025-10-12 10:37:50,764 | INFO     | will abort loop
[2025-10-12 06:38:26] 2025-10-12 10:37:50,787 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 06:38:26] 2025-10-12 10:37:51,164 | INFO     | all data control threads have been joined
[2025-10-12 06:38:26] 2025-10-12 10:37:51,462 | INFO     | all payload control threads have been joined
[2025-10-12 06:38:26] 2025-10-12 10:37:51,548 | INFO     | [job] retrieve thread has finished
[2025-10-12 06:38:26] 2025-10-12 10:37:51,760 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 06:38:26] 2025-10-12 10:37:51,760 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 06:38:26] 2025-10-12 10:37:51,770 | INFO     | [job] job monitor thread has finished
[2025-10-12 06:38:26] 2025-10-12 10:37:51,780 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 06:38:26] 2025-10-12 10:37:51,781 | INFO     | [job] validate thread has finished
[2025-10-12 06:38:26] 2025-10-12 10:37:51,904 | INFO     | all job control threads have been joined
[2025-10-12 06:38:26] 2025-10-12 10:37:52,015 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 06:38:26] 2025-10-12 10:37:52,170 | INFO     | [data] control thread has finished
[2025-10-12 06:38:26] 2025-10-12 10:37:52,349 | INFO     | [payload] validate_post thread has finished
[2025-10-12 06:38:26] 2025-10-12 10:37:52,468 | INFO     | [payload] control thread has finished
[2025-10-12 06:38:26] 2025-10-12 10:37:52,523 | INFO     | [payload] failed_post thread has finished
[2025-10-12 06:38:26] 2025-10-12 10:37:52,574 | INFO     | [data] copytool_in thread has finished
[2025-10-12 06:38:26] 2025-10-12 10:37:52,794 | INFO     | [data] copytool_out thread has finished
[2025-10-12 06:38:26] 2025-10-12 10:37:52,794 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 06:38:26] 2025-10-12 10:37:52,910 | INFO     | [job] control thread has finished
[2025-10-12 06:38:26] 2025-10-12 10:37:53,021 | INFO     | [job] queue monitor thread has finished
[2025-10-12 06:38:26] 2025-10-12 10:37:54,565 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 06:38:26] 2025-10-12 10:38:16,492 | INFO     | PID=4117859 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 06:38:26] 2025-10-12 10:38:16,493 | INFO     | .. there are 81 such processes running
[2025-10-12 06:38:26] 2025-10-12 10:38:16,495 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 06:38:26] 2025-10-12 10:38:16,495 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 06:38:26] 2025-10-12 10:38:16,495 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 06:38:26] 2025-10-12 10:38:17,239 | INFO     | [monitor] cgroup control has ended
[2025-10-12 06:38:26] 2025-10-12 10:38:18,525 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140044442531648)>', '<ExcThread(monitor, started 140044085999360)>']
[2025-10-12 06:38:26] 2025-10-12 10:38:19,513 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 06:38:26] 2025-10-12 10:38:19,513 | INFO     | [monitor] control thread has ended
[2025-10-12 06:38:26] 2025-10-12 10:38:23,551 | INFO     | all workflow threads have been joined
[2025-10-12 06:38:26] 2025-10-12 10:38:23,551 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 06:38:26] 2025-10-12 10:38:23,551 | INFO     | traces error code: 0
[2025-10-12 06:38:26] 2025-10-12 10:38:23,552 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 06:38:26] 2025-10-12 10:38:24,747 [wrapper] ==== pilot stdout END ====
[2025-10-12 06:38:26] 2025-10-12 10:38:24,756 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 06:38:26] 2025-10-12 10:38:24,759 [wrapper] pilotpid: 4117859
[2025-10-12 06:38:26] 2025-10-12 10:38:24,762 [wrapper] Pilot exit status: 0
[2025-10-12 06:38:26] 2025-10-12 10:38:24,860 [wrapper] pandaids: 6839242166
[2025-10-12 06:38:26] 2025-10-12 10:38:25,202 [wrapper] cleanup supervisor_pilot 2100240 4117860
[2025-10-12 06:38:26] 2025-10-12 10:38:25,234 [wrapper] Test setup, not cleaning
[2025-10-12 06:38:26] 2025-10-12 10:38:25,254 [wrapper] apfmon messages muted
[2025-10-12 06:38:26] 2025-10-12 10:38:25,281 [wrapper] ==== wrapper stdout END ====
[2025-10-12 06:38:26] 2025-10-12 10:38:25,310 [wrapper] ==== wrapper stderr END ====
[2025-10-12 06:38:26]  *** Error codes and diagnostics ***
[2025-10-12 06:38:26]     "exeErrorCode": 0,
[2025-10-12 06:38:26]     "exeErrorDiag": "",
[2025-10-12 06:38:26]     "pilotErrorCode": 0,
[2025-10-12 06:38:26]     "pilotErrorDiag": "",
[2025-10-12 06:38:26]  *** Listing of results directory ***
[2025-10-12 06:38:26] total 415604
[2025-10-12 06:38:26] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 21:26 pilot3.tar.gz
[2025-10-12 06:38:26] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 21:43 queuedata.json
[2025-10-12 06:38:26] -rwx------. 1 boincer umatlas     36292 Oct 11 21:43 runpilot2-wrapper.sh
[2025-10-12 06:38:26] -rw-r--r--. 1 boincer umatlas       100 Oct 12 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 06:38:26] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 00:03 run_atlas
[2025-10-12 06:38:26] -rw-r--r--. 1 boincer umatlas       105 Oct 12 00:03 job.xml
[2025-10-12 06:38:26] -rw-r--r--. 2 boincer umatlas 221196056 Oct 12 00:03 EVNT.46676267._003161.pool.root.1
[2025-10-12 06:38:26] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:03 start_atlas.sh
[2025-10-12 06:38:26] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 00:03 shared
[2025-10-12 06:38:26] -rw-r--r--. 2 boincer umatlas    569677 Oct 12 00:03 input.tar.gz
[2025-10-12 06:38:26] -rw-r--r--. 1 boincer umatlas         0 Oct 12 00:03 boinc_lockfile
[2025-10-12 06:38:26] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 00:03 pandaJob.out
[2025-10-12 06:38:26] -rw-------. 1 boincer umatlas    975512 Oct 12 00:05 agis_schedconf.cvmfs.json
[2025-10-12 06:38:26] drwx------. 5 boincer umatlas      4096 Oct 12 00:05 pilot3
[2025-10-12 06:38:26] -rw-r--r--. 1 boincer umatlas      6839 Oct 12 06:29 init_data.xml
[2025-10-12 06:38:26] -rw-------. 1 boincer umatlas 194514277 Oct 12 06:35 HITS.46676269._068825.pool.root.1
[2025-10-12 06:38:26] -rw-r--r--. 1 boincer umatlas       531 Oct 12 06:35 boinc_task_state.xml
[2025-10-12 06:38:26] -rw-------. 1 boincer umatlas      1041 Oct 12 06:36 memory_monitor_summary.json
[2025-10-12 06:38:26] -rw-------. 1 boincer umatlas   1560580 Oct 12 06:36 agis_ddmendpoints.agis.ALL.json
[2025-10-12 06:38:26] -rw-------. 1 boincer umatlas    545250 Oct 12 06:36 log.46676269._068825.job.log.tgz.1
[2025-10-12 06:38:26] -rw-------. 1 boincer umatlas        95 Oct 12 06:37 pilot_heartbeat.json
[2025-10-12 06:38:26] -rw-------. 1 boincer umatlas      7819 Oct 12 06:37 heartbeat.json
[2025-10-12 06:38:26] -rw-------. 1 boincer umatlas      5010 Oct 12 06:38 pilotlog.txt
[2025-10-12 06:38:26] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 06:38 boinc_mmap_file
[2025-10-12 06:38:26] -rw-r--r--. 1 boincer umatlas        28 Oct 12 06:38 wrapper_checkpoint.txt
[2025-10-12 06:38:26] -rw-------. 1 boincer umatlas   2433142 Oct 12 06:38 log.46676269._068825.job.log.1
[2025-10-12 06:38:26] -rw-------. 1 boincer umatlas       357 Oct 12 06:38 output.list
[2025-10-12 06:38:26] -rw-r--r--. 1 boincer umatlas       620 Oct 12 06:38 runtime_log
[2025-10-12 06:38:26] -rw-------. 1 boincer umatlas   3000320 Oct 12 06:38 result.tar.gz
[2025-10-12 06:38:26] -rw-r--r--. 1 boincer umatlas      8689 Oct 12 06:38 runtime_log.err
[2025-10-12 06:38:26] -rw-------. 1 boincer umatlas       654 Oct 12 06:38 nwHLDm0I0R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm6FiNDm5DL78n.diag
[2025-10-12 06:38:26] -rw-r--r--. 1 boincer umatlas     21066 Oct 12 06:38 stderr.txt
[2025-10-12 06:38:26] HITS file was successfully produced:
[2025-10-12 06:38:26] -rw-------. 1 boincer umatlas 194514277 Oct 12 06:35 shared/HITS.pool.root.1
[2025-10-12 06:38:26]  *** Contents of shared directory: ***
[2025-10-12 06:38:26] total 409484
[2025-10-12 06:38:26] -rw-r--r--. 2 boincer umatlas 221196056 Oct 12 00:03 ATLAS.root_0
[2025-10-12 06:38:26] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:03 start_atlas.sh
[2025-10-12 06:38:26] -rw-r--r--. 2 boincer umatlas    569677 Oct 12 00:03 input.tar.gz
[2025-10-12 06:38:26] -rw-------. 1 boincer umatlas 194514277 Oct 12 06:35 HITS.pool.root.1
[2025-10-12 06:38:26] -rw-------. 1 boincer umatlas   3000320 Oct 12 06:38 result.tar.gz
06:38:28 (4100832): run_atlas exited; CPU time 46267.687519
06:38:28 (4100832): called boinc_finish(0)

</stderr_txt>
]]>

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