Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:33 (3160197): wrapper (7.7.26015): starting
00:02:33 (3160197): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 00:02:33] Arguments: --nthreads 8
[2025-10-12 00:02:33] Threads: 8
[2025-10-12 00:02:33] Checking for CVMFS
[2025-10-12 00:02:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 00:02:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 00:02:35] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 00:02:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 00:02:37] 2.13.2.0 1387712 18032 249664 151606 3 729 30982014 32935937 22904 16776704 0 44716534 99.625 44036712 29328 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 00:02:37] CVMFS is ok
[2025-10-12 00:02:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 00:02:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 00:02:37] Further information can be found at the LHC@home message board.
[2025-10-12 00:02:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 00:02:37] Checking for apptainer binary...
[2025-10-12 00:02:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 00:02:37] Running /usr/bin/apptainer --version
[2025-10-12 00:02:37] apptainer version 1.4.3-1.el9
[2025-10-12 00:02:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 00:02:38] c6-2-29-3.aglt2.org
[2025-10-12 00:02:38] apptainer works
[2025-10-12 00:02:38] Set ATHENA_PROC_NUMBER=8
[2025-10-12 00:02:38] Set ATHENA_CORE_NUMBER=8
[2025-10-12 00:02:38] Starting ATLAS job with PandaID=6838990766
[2025-10-12 00:02:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 10:49:23]  *** The last 200 lines of the pilot log: ***
[2025-10-12 10:49:23] 2025-10-12 14:48:21,101 | INFO     | fitting pss+swap vs Time
[2025-10-12 10:49:23] 2025-10-12 14:48:21,102 | INFO     | sum of square deviations: 77533173191.59375
[2025-10-12 10:49:23] 2025-10-12 14:48:21,110 | INFO     | sum of deviations: 182499548449.98416
[2025-10-12 10:49:23] 2025-10-12 14:48:21,110 | INFO     | mean x: 1760261227.3746033
[2025-10-12 10:49:23] 2025-10-12 14:48:21,110 | INFO     | mean y: 2068651.9365079366
[2025-10-12 10:49:23] 2025-10-12 14:48:21,110 | INFO     | -- intersect: -4141278845.992418
[2025-10-12 10:49:23] 2025-10-12 14:48:21,110 | INFO     | intersect: -4141278845.992418
[2025-10-12 10:49:23] 2025-10-12 14:48:21,111 | INFO     | chi2: 6.372546496569181
[2025-10-12 10:49:23] 2025-10-12 14:48:21,118 | INFO     | sum of square deviations: 75701836159.99974
[2025-10-12 10:49:23] 2025-10-12 14:48:21,128 | INFO     | sum of deviations: 279241914151.43964
[2025-10-12 10:49:23] 2025-10-12 14:48:21,128 | INFO     | mean x: 1760261074.88
[2025-10-12 10:49:23] 2025-10-12 14:48:21,128 | INFO     | mean y: 2076680.5392
[2025-10-12 10:49:23] 2025-10-12 14:48:21,128 | INFO     | -- intersect: -6491011161.04062
[2025-10-12 10:49:23] 2025-10-12 14:48:21,128 | INFO     | intersect: -6491011161.04062
[2025-10-12 10:49:23] 2025-10-12 14:48:21,170 | INFO     | chi2: 4.215541775685515
[2025-10-12 10:49:23] 2025-10-12 14:48:21,170 | INFO     | current chi2=4.215541775685515 (change=33.84839517522459 %)
[2025-10-12 10:49:23] 2025-10-12 14:48:21,171 | INFO     | sum of square deviations: 73899455552.168
[2025-10-12 10:49:23] 2025-10-12 14:48:21,218 | INFO     | sum of deviations: 269024276432.38077
[2025-10-12 10:49:23] 2025-10-12 14:48:21,227 | INFO     | mean x: 1760260922.3806453
[2025-10-12 10:49:23] 2025-10-12 14:48:21,228 | INFO     | mean y: 2075815.9983870967
[2025-10-12 10:49:23] 2025-10-12 14:48:21,228 | INFO     | -- intersect: -6405994682.455448
[2025-10-12 10:49:23] 2025-10-12 14:48:21,228 | INFO     | intersect: -6405994682.455448
[2025-10-12 10:49:23] 2025-10-12 14:48:21,229 | INFO     | chi2: 4.212013742566305
[2025-10-12 10:49:23] 2025-10-12 14:48:21,229 | INFO     | current chi2=4.212013742566305 (change=0.08369109611388159 %)
[2025-10-12 10:49:23] 2025-10-12 14:48:21,229 | INFO     | right removable region: 619
[2025-10-12 10:49:23] 2025-10-12 14:48:21,230 | INFO     | sum of square deviations: 75701576665.99973
[2025-10-12 10:49:23] 2025-10-12 14:48:21,276 | INFO     | sum of deviations: 36756612880.07997
[2025-10-12 10:49:23] 2025-10-12 14:48:21,277 | INFO     | mean x: 1760261379.88
[2025-10-12 10:49:23] 2025-10-12 14:48:21,286 | INFO     | mean y: 2080774.0144
[2025-10-12 10:49:23] 2025-10-12 14:48:21,286 | INFO     | -- intersect: -852607449.8976415
[2025-10-12 10:49:23] 2025-10-12 14:48:21,287 | INFO     | intersect: -852607449.8976415
[2025-10-12 10:49:23] 2025-10-12 14:48:21,288 | INFO     | chi2: 3.490514598528517
[2025-10-12 10:49:23] 2025-10-12 14:48:21,288 | INFO     | current chi2=3.490514598528517 (change=45.22574922901351 %)
[2025-10-12 10:49:23] 2025-10-12 14:48:21,289 | INFO     | sum of square deviations: 73899164218.16803
[2025-10-12 10:49:23] 2025-10-12 14:48:21,326 | INFO     | monitor loop #2122: job 0:6838990766 is in state 'finished'
[2025-10-12 10:49:23] 2025-10-12 14:48:21,326 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 10:49:23] 2025-10-12 14:48:21,399 | INFO     | sum of deviations: -36233574507.14191
[2025-10-12 10:49:23] 2025-10-12 14:48:21,399 | INFO     | mean x: 1760261532.3806453
[2025-10-12 10:49:23] 2025-10-12 14:48:21,399 | INFO     | mean y: 2086948.7548387097
[2025-10-12 10:49:23] 2025-10-12 14:48:21,400 | INFO     | -- intersect: 865162574.3096067
[2025-10-12 10:49:23] 2025-10-12 14:48:21,400 | INFO     | intersect: 865162574.3096067
[2025-10-12 10:49:23] 2025-10-12 14:48:21,401 | INFO     | chi2: 2.819316258813444
[2025-10-12 10:49:23] 2025-10-12 14:48:21,441 | INFO     | current chi2=2.819316258813444 (change=19.22920878193798 %)
[2025-10-12 10:49:23] 2025-10-12 14:48:21,442 | INFO     | left removable region: 20
[2025-10-12 10:49:23] 2025-10-12 14:48:21,443 | INFO     | sum of square deviations: 66641257872.78787
[2025-10-12 10:49:23] 2025-10-12 14:48:21,515 | INFO     | sum of deviations: 9213611753.103493
[2025-10-12 10:49:23] 2025-10-12 14:48:21,515 | INFO     | mean x: 1760261501.8981636
[2025-10-12 10:49:23] 2025-10-12 14:48:21,515 | INFO     | mean y: 2098113.821368948
[2025-10-12 10:49:23] 2025-10-12 14:48:21,515 | INFO     | -- intersect: -241270132.51911756
[2025-10-12 10:49:23] 2025-10-12 14:48:21,515 | INFO     | intersect: -241270132.51911756
[2025-10-12 10:49:23] 2025-10-12 14:48:21,516 | INFO     | chi2: 0.4523887351566368
[2025-10-12 10:49:23] 2025-10-12 14:48:21,516 | INFO     | -- intersect: -241270132.51911756
[2025-10-12 10:49:23] 2025-10-12 14:48:21,516 | INFO     | current memory leak: 0.14 B/s (using 599 data points, chi2=0.45)
[2025-10-12 10:49:23] 2025-10-12 14:48:21,549 | INFO     | could have reported an average CPU frequency of 2751 MHz (24 samples)
[2025-10-12 10:49:23] 2025-10-12 14:48:21,550 | INFO     | ..............................
[2025-10-12 10:49:23] 2025-10-12 14:48:21,550 | INFO     | . Timing measurements:
[2025-10-12 10:49:23] 2025-10-12 14:48:21,550 | INFO     | . get job = 0 s
[2025-10-12 10:49:23] 2025-10-12 14:48:21,550 | INFO     | . initial setup = 7 s
[2025-10-12 10:49:23] 2025-10-12 14:48:21,550 | INFO     | . payload setup = 53 s
[2025-10-12 10:49:23] 2025-10-12 14:48:21,550 | INFO     | . stage-in = 0 s
[2025-10-12 10:49:23] 2025-10-12 14:48:21,550 | INFO     | . payload execution = 38457 s
[2025-10-12 10:49:23] 2025-10-12 14:48:21,550 | INFO     | . stage-out = 4 s
[2025-10-12 10:49:23] 2025-10-12 14:48:21,550 | INFO     | . log creation = 0 s
[2025-10-12 10:49:23] 2025-10-12 14:48:21,550 | INFO     | ..............................
[2025-10-12 10:49:23] 2025-10-12 14:48:21,879 | INFO     | 
[2025-10-12 10:49:23] 2025-10-12 14:48:21,880 | INFO     | job summary report
[2025-10-12 10:49:23] 2025-10-12 14:48:21,880 | INFO     | --------------------------------------------------
[2025-10-12 10:49:23] 2025-10-12 14:48:21,880 | INFO     | PanDA job id: 6838990766
[2025-10-12 10:49:23] 2025-10-12 14:48:21,880 | INFO     | task id: 46676269
[2025-10-12 10:49:23] 2025-10-12 14:48:21,880 | INFO     | errors: (none)
[2025-10-12 10:49:23] 2025-10-12 14:48:21,880 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 10:49:23] 2025-10-12 14:48:21,880 | INFO     | pilot state: finished 
[2025-10-12 10:49:23] 2025-10-12 14:48:21,880 | INFO     | transexitcode: 0
[2025-10-12 10:49:23] 2025-10-12 14:48:21,881 | INFO     | exeerrorcode: 0
[2025-10-12 10:49:23] 2025-10-12 14:48:21,881 | INFO     | exeerrordiag: 
[2025-10-12 10:49:23] 2025-10-12 14:48:21,881 | INFO     | exitcode: 0
[2025-10-12 10:49:23] 2025-10-12 14:48:21,881 | INFO     | exitmsg: OK
[2025-10-12 10:49:23] 2025-10-12 14:48:21,881 | INFO     | cpuconsumptiontime: 43280 s
[2025-10-12 10:49:23] 2025-10-12 14:48:21,881 | INFO     | nevents: 400
[2025-10-12 10:49:23] 2025-10-12 14:48:21,881 | INFO     | neventsw: 0
[2025-10-12 10:49:23] 2025-10-12 14:48:21,881 | INFO     | pid: 3206782
[2025-10-12 10:49:23] 2025-10-12 14:48:21,881 | INFO     | pgrp: 3206782
[2025-10-12 10:49:23] 2025-10-12 14:48:21,881 | INFO     | corecount: 8
[2025-10-12 10:49:23] 2025-10-12 14:48:21,882 | INFO     | event service: False
[2025-10-12 10:49:23] 2025-10-12 14:48:21,882 | INFO     | sizes: {0: 2348029, 1: 2348714, 2: 2348714, 3: 2348941, 14: 2348941, 26: 2348969, 37: 2349125, 48: 2349209, 49: 2349443, 59: 2349471, 38515: 2391262, 38520: 240026
[2025-10-12 10:49:23] 2025-10-12 14:48:21,882 | INFO     | --------------------------------------------------
[2025-10-12 10:49:23] 2025-10-12 14:48:21,882 | INFO     | 
[2025-10-12 10:49:23] 2025-10-12 14:48:21,882 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-10-12 10:49:23] 2025-10-12 14:48:22,090 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 10:49:23] 2025-10-12 14:48:22,091 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 10:49:23] 2025-10-12 14:48:22,091 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 10:49:23] 2025-10-12 14:48:22,091 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 10:49:23] 2025-10-12 14:48:22,091 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 10:49:23] 2025-10-12 14:48:22,091 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 10:49:23] 2025-10-12 14:48:22,092 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 10:49:23] 2025-10-12 14:48:22,092 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 10:49:23] 2025-10-12 14:48:22,092 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 10:49:23] 2025-10-12 14:48:22,092 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 10:49:23] 2025-10-12 14:48:22,092 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 10:49:23] 2025-10-12 14:48:22,092 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 10:49:23] 2025-10-12 14:48:22,092 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 10:49:23] 2025-10-12 14:48:22,092 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 10:49:23] 2025-10-12 14:48:22,092 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 10:49:23] 2025-10-12 14:48:22,093 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 10:49:23] 2025-10-12 14:48:22,093 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 10:49:23] 2025-10-12 14:48:22,093 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 10:49:23] 2025-10-12 14:48:22,093 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 10:49:23] 2025-10-12 14:48:22,093 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 10:49:23] 2025-10-12 14:48:22,093 | INFO     | job 6838990766 has completed (purged errors)
[2025-10-12 10:49:23] 2025-10-12 14:48:22,093 | INFO     | overall cleanup function is called
[2025-10-12 10:49:23] 2025-10-12 14:48:23,104 | INFO     | --- collectZombieJob: --- 10, [3206782]
[2025-10-12 10:49:23] 2025-10-12 14:48:23,104 | INFO     | zombie collector waiting for pid 3206782
[2025-10-12 10:49:23] 2025-10-12 14:48:23,104 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 10:49:23] 2025-10-12 14:48:23,104 | INFO     | collected zombie processes
[2025-10-12 10:49:23] 2025-10-12 14:48:23,104 | INFO     | will attempt to kill all subprocesses of pid=3206782
[2025-10-12 10:49:23] 2025-10-12 14:48:24,226 | INFO     | process IDs to be killed: [3206782] (in reverse order)
[2025-10-12 10:49:23] 2025-10-12 14:48:24,349 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 10:49:23] 2025-10-12 14:48:24,349 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 10:49:23] 2025-10-12 14:48:24,361 | INFO     | did not find any defunct processes belonging to 3206782
[2025-10-12 10:49:23] 2025-10-12 14:48:24,372 | INFO     | did not find any defunct processes belonging to 3206782
[2025-10-12 10:49:23] 2025-10-12 14:48:24,373 | INFO     | ready for new job
[2025-10-12 10:49:23] 2025-10-12 14:48:24,373 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 10:49:23] 2025-10-12 14:48:24,376 | INFO     | ***************************************
[2025-10-12 10:49:23] 2025-10-12 14:48:24,377 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 10:49:23] 2025-10-12 14:48:24,377 | INFO     | ***************************************
[2025-10-12 10:49:23] 2025-10-12 14:48:24,377 | INFO     | 
[2025-10-12 10:49:23] 2025-10-12 14:48:24,418 | INFO     | architecture information:
[2025-10-12 10:49:23] 2025-10-12 14:48:24,423 | INFO     | executing command: cat /etc/os-release
[2025-10-12 10:49:23] 2025-10-12 14:48:24,527 | INFO     | cat /etc/os-release:
[2025-10-12 10:49:23] NAME="CentOS Linux"
[2025-10-12 10:49:23] VERSION="7 (Core)"
[2025-10-12 10:49:23] ID="centos"
[2025-10-12 10:49:23] ID_LIKE="rhel fedora"
[2025-10-12 10:49:23] VERSION_ID="7"
[2025-10-12 10:49:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 10:49:23] ANSI_COLOR="0;31"
[2025-10-12 10:49:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 10:49:23] HOME_URL="https://www.centos.org/"
[2025-10-12 10:49:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 10:49:23] 
[2025-10-12 10:49:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 10:49:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 10:49:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 10:49:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 10:49:23] 
[2025-10-12 10:49:23] 2025-10-12 14:48:24,527 | INFO     | ***************************************
[2025-10-12 10:49:23] 2025-10-12 14:48:25,031 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-10-12 10:49:23] 2025-10-12 14:48:25,139 | INFO     | sufficient remaining disk space (75260493824 B)
[2025-10-12 10:49:23] 2025-10-12 14:48:25,139 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 10:49:23] 2025-10-12 14:48:25,139 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 10:49:23] 2025-10-12 14:48:25,139 | INFO     | update_server=False
[2025-10-12 10:49:23] 2025-10-12 14:48:25,139 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 10:49:23] 2025-10-12 14:48:25,140 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 10:49:23] 2025-10-12 14:48:25,140 | INFO     | aborting loop
[2025-10-12 10:49:23] 2025-10-12 14:48:25,145 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 10:49:23] 2025-10-12 14:48:25,815 | INFO     | all data control threads have been joined
[2025-10-12 10:49:23] 2025-10-12 14:48:26,145 | INFO     | [job] retrieve thread has finished
[2025-10-12 10:49:23] 2025-10-12 14:48:26,153 | INFO     | [job] job monitor thread has finished
[2025-10-12 10:49:23] 2025-10-12 14:48:26,181 | INFO     | [payload] validate_post thread has finished
[2025-10-12 10:49:23] 2025-10-12 14:48:26,201 | INFO     | all job control threads have been joined
[2025-10-12 10:49:23] 2025-10-12 14:48:26,364 | INFO     | [payload] failed_post thread has finished
[2025-10-12 10:49:23] 2025-10-12 14:48:26,381 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 10:49:23] 2025-10-12 14:48:26,385 | INFO     | all payload control threads have been joined
[2025-10-12 10:49:23] 2025-10-12 14:48:26,608 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 10:49:23] 2025-10-12 14:48:26,821 | INFO     | [data] control thread has finished
[2025-10-12 10:49:23] 2025-10-12 14:48:26,912 | INFO     | [job] validate thread has finished
[2025-10-12 10:49:23] 2025-10-12 14:48:26,929 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 10:49:23] 2025-10-12 14:48:27,079 | INFO     | [data] copytool_in thread has finished
[2025-10-12 10:49:23] 2025-10-12 14:48:27,093 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 10:49:23] 2025-10-12 14:48:27,170 | INFO     | [data] copytool_out thread has finished
[2025-10-12 10:49:23] 2025-10-12 14:48:27,207 | INFO     | [job] control thread has finished
[2025-10-12 10:49:23] 2025-10-12 14:48:27,297 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 10:49:23] 2025-10-12 14:48:27,297 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 10:49:23] 2025-10-12 14:48:27,391 | INFO     | [payload] control thread has finished
[2025-10-12 10:49:23] 2025-10-12 14:48:27,935 | INFO     | [job] queue monitor thread has finished
[2025-10-12 10:49:23] 2025-10-12 14:48:30,390 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 10:49:23] 2025-10-12 14:48:54,621 | INFO     | PID=3173475 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 10:49:23] 2025-10-12 14:48:54,621 | INFO     | .. there are 24 such processes running
[2025-10-12 10:49:23] 2025-10-12 14:48:54,674 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 10:49:23] 2025-10-12 14:48:54,675 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 10:49:23] 2025-10-12 14:48:54,675 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 10:49:23] 2025-10-12 14:48:57,086 [wrapper] supervise_pilot (15 min periods counter: 44)
[2025-10-12 10:49:23] 2025-10-12 14:49:15,934 | INFO     | [monitor] cgroup control has ended
[2025-10-12 10:49:23] 2025-10-12 14:49:16,968 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140293655574336)>', '<ExcThread(monitor, started 140293001168640)>']
[2025-10-12 10:49:23] 2025-10-12 14:49:17,822 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 10:49:23] 2025-10-12 14:49:17,840 | INFO     | [monitor] control thread has ended
[2025-10-12 10:49:23] 2025-10-12 14:49:21,994 | INFO     | all workflow threads have been joined
[2025-10-12 10:49:23] 2025-10-12 14:49:21,994 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 10:49:23] 2025-10-12 14:49:21,995 | INFO     | traces error code: 0
[2025-10-12 10:49:23] 2025-10-12 14:49:21,995 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 10:49:23] 2025-10-12 14:49:22,562 [wrapper] ==== pilot stdout END ====
[2025-10-12 10:49:23] 2025-10-12 14:49:22,601 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 10:49:23] 2025-10-12 14:49:22,644 [wrapper] pilotpid: 3173475
[2025-10-12 10:49:23] 2025-10-12 14:49:22,682 [wrapper] Pilot exit status: 0
[2025-10-12 10:49:23] 2025-10-12 14:49:22,733 [wrapper] pandaids: 6838990766
[2025-10-12 10:49:23] 2025-10-12 14:49:23,304 [wrapper] cleanup supervisor_pilot  743591 3173476
[2025-10-12 10:49:23] 2025-10-12 14:49:23,339 [wrapper] Test setup, not cleaning
[2025-10-12 10:49:23] 2025-10-12 14:49:23,369 [wrapper] apfmon messages muted
[2025-10-12 10:49:23] 2025-10-12 14:49:23,384 [wrapper] ==== wrapper stdout END ====
[2025-10-12 10:49:23] 2025-10-12 14:49:23,390 [wrapper] ==== wrapper stderr END ====
[2025-10-12 10:49:23]  *** Error codes and diagnostics ***
[2025-10-12 10:49:23]     "exeErrorCode": 0,
[2025-10-12 10:49:23]     "exeErrorDiag": "",
[2025-10-12 10:49:23]     "pilotErrorCode": 0,
[2025-10-12 10:49:23]     "pilotErrorDiag": "",
[2025-10-12 10:49:23]  *** Listing of results directory ***
[2025-10-12 10:49:23] total 424728
[2025-10-12 10:49:23] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 18:51 queuedata.json
[2025-10-12 10:49:23] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 18:51 pilot3.tar.gz
[2025-10-12 10:49:23] -rwx------. 1 boincer umatlas     36292 Oct 11 18:52 runpilot2-wrapper.sh
[2025-10-12 10:49:23] -rw-r--r--. 1 boincer umatlas       100 Oct 12 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 10:49:23] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 00:02 run_atlas
[2025-10-12 10:49:23] -rw-r--r--. 1 boincer umatlas       105 Oct 12 00:02 job.xml
[2025-10-12 10:49:23] -rw-r--r--. 2 boincer umatlas 222468850 Oct 12 00:02 EVNT.46676267._002665.pool.root.1
[2025-10-12 10:49:23] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:02 start_atlas.sh
[2025-10-12 10:49:23] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 00:02 shared
[2025-10-12 10:49:23] -rw-r--r--. 2 boincer umatlas    569678 Oct 12 00:02 input.tar.gz
[2025-10-12 10:49:23] -rw-r--r--. 1 boincer umatlas         0 Oct 12 00:02 boinc_lockfile
[2025-10-12 10:49:23] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 00:02 pandaJob.out
[2025-10-12 10:49:23] -rw-------. 1 boincer umatlas    975512 Oct 12 00:03 agis_schedconf.cvmfs.json
[2025-10-12 10:49:23] drwx------. 5 boincer umatlas      4096 Oct 12 00:04 pilot3
[2025-10-12 10:49:23] -rw-------. 1 boincer umatlas 197992220 Oct 12 10:44 HITS.46676269._066255.pool.root.1
[2025-10-12 10:49:23] -rw-r--r--. 1 boincer umatlas       531 Oct 12 10:44 boinc_task_state.xml
[2025-10-12 10:49:23] -rw-r--r--. 1 boincer umatlas      6843 Oct 12 10:46 init_data.xml
[2025-10-12 10:49:23] -rw-------. 1 boincer umatlas      1043 Oct 12 10:47 memory_monitor_summary.json
[2025-10-12 10:49:23] -rw-------. 1 boincer umatlas   1560580 Oct 12 10:47 agis_ddmendpoints.agis.ALL.json
[2025-10-12 10:49:23] -rw-------. 1 boincer umatlas    762130 Oct 12 10:47 log.46676269._066255.job.log.tgz.1
[2025-10-12 10:49:23] -rw-------. 1 boincer umatlas      7827 Oct 12 10:48 heartbeat.json
[2025-10-12 10:49:23] -rw-------. 1 boincer umatlas        95 Oct 12 10:48 pilot_heartbeat.json
[2025-10-12 10:49:23] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 10:48 boinc_mmap_file
[2025-10-12 10:49:23] -rw-r--r--. 1 boincer umatlas        28 Oct 12 10:48 wrapper_checkpoint.txt
[2025-10-12 10:49:23] -rw-------. 1 boincer umatlas      4824 Oct 12 10:49 pilotlog.txt
[2025-10-12 10:49:23] -rw-------. 1 boincer umatlas   4517768 Oct 12 10:49 log.46676269._066255.job.log.1
[2025-10-12 10:49:23] -rw-------. 1 boincer umatlas       357 Oct 12 10:49 output.list
[2025-10-12 10:49:23] -rw-r--r--. 1 boincer umatlas       620 Oct 12 10:49 runtime_log
[2025-10-12 10:49:23] -rw-------. 1 boincer umatlas   5294080 Oct 12 10:49 result.tar.gz
[2025-10-12 10:49:23] -rw-r--r--. 1 boincer umatlas      8709 Oct 12 10:49 runtime_log.err
[2025-10-12 10:49:23] -rw-------. 1 boincer umatlas       659 Oct 12 10:49 LA8NDmAdxR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmgphNDmujE3cn.diag
[2025-10-12 10:49:23] -rw-r--r--. 1 boincer umatlas     21056 Oct 12 10:49 stderr.txt
[2025-10-12 10:49:23] HITS file was successfully produced:
[2025-10-12 10:49:23] -rw-------. 1 boincer umatlas 197992220 Oct 12 10:44 shared/HITS.pool.root.1
[2025-10-12 10:49:23]  *** Contents of shared directory: ***
[2025-10-12 10:49:24] total 416364
[2025-10-12 10:49:24] -rw-r--r--. 2 boincer umatlas 222468850 Oct 12 00:02 ATLAS.root_0
[2025-10-12 10:49:24] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:02 start_atlas.sh
[2025-10-12 10:49:24] -rw-r--r--. 2 boincer umatlas    569678 Oct 12 00:02 input.tar.gz
[2025-10-12 10:49:24] -rw-------. 1 boincer umatlas 197992220 Oct 12 10:44 HITS.pool.root.1
[2025-10-12 10:49:24] -rw-------. 1 boincer umatlas   5294080 Oct 12 10:49 result.tar.gz
10:49:25 (3160197): run_atlas exited; CPU time 44640.165846
10:49:25 (3160197): called boinc_finish(0)

</stderr_txt>
]]>

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