Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:19 (2345627): wrapper (7.7.26015): starting
00:03:19 (2345627): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 00:03:19] Arguments: --nthreads 12
[2025-10-12 00:03:19] Threads: 12
[2025-10-12 00:03:19] Checking for CVMFS
[2025-10-12 00:03:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 00:03:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 00:03:21] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 00:03:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 00:03:22] 2.13.2.0 1588368 55540 335092 151606 1 26 19657295 39288832 9757 16776704 0 62375567 99.644 55684178 33068 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 00:03:22] CVMFS is ok
[2025-10-12 00:03:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 00:03:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 00:03:22] Further information can be found at the LHC@home message board.
[2025-10-12 00:03:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 00:03:22] Checking for apptainer binary...
[2025-10-12 00:03:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 00:03:22] Running /usr/bin/apptainer --version
[2025-10-12 00:03:25] apptainer version 1.4.3-1.el9
[2025-10-12 00:03:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 00:03:26] c-210-6.aglt2.org
[2025-10-12 00:03:26] apptainer works
[2025-10-12 00:03:26] Set ATHENA_PROC_NUMBER=12
[2025-10-12 00:03:26] Set ATHENA_CORE_NUMBER=12
[2025-10-12 00:03:26] Starting ATLAS job with PandaID=6838990865
[2025-10-12 00:03:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
07:12:40 (2964547): wrapper (7.7.26015): starting
07:12:40 (2964547): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 07:12:40] Arguments: --nthreads 8
[2025-10-12 07:12:40] Threads: 8
[2025-10-12 07:12:40] This job has been restarted, cleaning up previous attempt
[2025-10-12 07:12:40] Checking for CVMFS
[2025-10-12 07:12:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 07:12:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 07:12:40] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 07:12:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 07:12:42] 2.13.2.0 1588368 55970 326952 151618 0 13 20089935 39288833 7952 16776704 0 62779389 99.647 55700189 33066 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 07:12:42] CVMFS is ok
[2025-10-12 07:12:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 07:12:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 07:12:42] Further information can be found at the LHC@home message board.
[2025-10-12 07:12:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 07:12:42] Checking for apptainer binary...
[2025-10-12 07:12:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 07:12:42] Running /usr/bin/apptainer --version
[2025-10-12 07:12:42] apptainer version 1.4.3-1.el9
[2025-10-12 07:12:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 07:12:43] c-210-6.aglt2.org
[2025-10-12 07:12:43] apptainer works
[2025-10-12 07:12:43] Set ATHENA_PROC_NUMBER=8
[2025-10-12 07:12:43] Set ATHENA_CORE_NUMBER=8
[2025-10-12 07:12:43] Starting ATLAS job with PandaID=6838990865
[2025-10-12 07:12:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 11:46:46]  *** The last 200 lines of the pilot log: ***
[2025-10-12 11:46:46] 2025-10-12 15:45:57,305 | INFO     | time since job start (16366s) is within the limit (172800.0s)
[2025-10-12 11:46:46] 2025-10-12 15:45:58,174 | INFO     | monitor loop #1056: job 0:6838990865 is in state 'finished'
[2025-10-12 11:46:46] 2025-10-12 15:45:58,174 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 11:46:46] 2025-10-12 15:45:58,877 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 11:46:46] 2025-10-12 15:45:58,885 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.174325000001
[2025-10-12 11:46:46] 2025-10-12 15:45:58,892 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6838990865/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 11:46:46] 2025-10-12 15:45:58,893 | INFO     | extracted standard info from prmon json
[2025-10-12 11:46:46] 2025-10-12 15:45:58,893 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 11:46:46] 2025-10-12 15:45:58,893 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 11:46:46] 2025-10-12 15:45:58,894 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 11:46:46] 2025-10-12 15:45:58,894 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 11:46:46] 2025-10-12 15:45:58,900 | INFO     | fitting pss+swap vs Time
[2025-10-12 11:46:46] 2025-10-12 15:45:58,901 | INFO     | sum of square deviations: 5902581721.348301
[2025-10-12 11:46:46] 2025-10-12 15:45:58,903 | INFO     | sum of deviations: -4648500165.325864
[2025-10-12 11:46:46] 2025-10-12 15:45:58,903 | INFO     | mean x: 1760275777.0786517
[2025-10-12 11:46:46] 2025-10-12 15:45:58,903 | INFO     | mean y: 2540412.205992509
[2025-10-12 11:46:46] 2025-10-12 15:45:58,903 | INFO     | -- intersect: 1388822318.507173
[2025-10-12 11:46:46] 2025-10-12 15:45:58,904 | INFO     | intersect: 1388822318.507173
[2025-10-12 11:46:46] 2025-10-12 15:45:58,904 | INFO     | chi2: 1.8652092454946936
[2025-10-12 11:46:46] 2025-10-12 15:45:58,904 | INFO     | sum of square deviations: 5577324060.064881
[2025-10-12 11:46:46] 2025-10-12 15:45:58,906 | INFO     | sum of deviations: -4274796497.522901
[2025-10-12 11:46:46] 2025-10-12 15:45:58,907 | INFO     | mean x: 1760275624.6145039
[2025-10-12 11:46:46] 2025-10-12 15:45:58,907 | INFO     | mean y: 2540587.400763359
[2025-10-12 11:46:46] 2025-10-12 15:45:58,907 | INFO     | -- intersect: 1351721663.081254
[2025-10-12 11:46:46] 2025-10-12 15:45:58,907 | INFO     | intersect: 1351721663.081254
[2025-10-12 11:46:46] 2025-10-12 15:45:58,908 | INFO     | chi2: 1.8653584919338446
[2025-10-12 11:46:46] 2025-10-12 15:45:58,908 | INFO     | current chi2=1.8653584919338446 (change=-0.008001592288454332 %)
[2025-10-12 11:46:46] 2025-10-12 15:45:58,908 | INFO     | right removable region: 261
[2025-10-12 11:46:46] 2025-10-12 15:45:58,908 | INFO     | sum of square deviations: 5577001671.832047
[2025-10-12 11:46:46] 2025-10-12 15:45:58,911 | INFO     | sum of deviations: -54518219787.83965
[2025-10-12 11:46:46] 2025-10-12 15:45:58,911 | INFO     | mean x: 1760275929.6183207
[2025-10-12 11:46:46] 2025-10-12 15:45:58,911 | INFO     | mean y: 2563625.5916030533
[2025-10-12 11:46:46] 2025-10-12 15:45:58,911 | INFO     | -- intersect: 17210216709.663593
[2025-10-12 11:46:46] 2025-10-12 15:45:58,911 | INFO     | intersect: 17210216709.663593
[2025-10-12 11:46:46] 2025-10-12 15:45:58,912 | INFO     | chi2: 0.1317916374045378
[2025-10-12 11:46:46] 2025-10-12 15:45:58,912 | INFO     | current chi2=0.1317916374045378 (change=92.93421702026875 %)
[2025-10-12 11:46:46] 2025-10-12 15:45:58,913 | INFO     | sum of square deviations: 5263623759.774289
[2025-10-12 11:46:46] 2025-10-12 15:45:58,915 | INFO     | sum of deviations: -53409828222.33074
[2025-10-12 11:46:46] 2025-10-12 15:45:58,915 | INFO     | mean x: 1760276082.155642
[2025-10-12 11:46:46] 2025-10-12 15:45:58,915 | INFO     | mean y: 2563066.8832684825
[2025-10-12 11:46:46] 2025-10-12 15:45:58,915 | INFO     | -- intersect: 17864030273.24031
[2025-10-12 11:46:46] 2025-10-12 15:45:58,915 | INFO     | intersect: 17864030273.24031
[2025-10-12 11:46:46] 2025-10-12 15:45:58,916 | INFO     | chi2: 0.12018316912634885
[2025-10-12 11:46:46] 2025-10-12 15:45:58,916 | INFO     | current chi2=0.12018316912634885 (change=8.808197930310603 %)
[2025-10-12 11:46:46] 2025-10-12 15:45:58,916 | INFO     | left removable region: 20
[2025-10-12 11:46:46] 2025-10-12 15:45:58,917 | INFO     | sum of square deviations: 4340323295.668027
[2025-10-12 11:46:46] 2025-10-12 15:45:58,918 | INFO     | sum of deviations: -41715559636.103745
[2025-10-12 11:46:46] 2025-10-12 15:45:58,919 | INFO     | mean x: 1760276204.2904565
[2025-10-12 11:46:46] 2025-10-12 15:45:58,919 | INFO     | mean y: 2558293.215767635
[2025-10-12 11:46:46] 2025-10-12 15:45:58,919 | INFO     | -- intersect: 16920861832.812119
[2025-10-12 11:46:46] 2025-10-12 15:45:58,919 | INFO     | intersect: 16920861832.812119
[2025-10-12 11:46:46] 2025-10-12 15:45:58,920 | INFO     | chi2: 0.11282219868472486
[2025-10-12 11:46:46] 2025-10-12 15:45:58,920 | INFO     | -- intersect: 16920861832.812119
[2025-10-12 11:46:46] 2025-10-12 15:45:58,920 | INFO     | current memory leak: -9.61 B/s (using 241 data points, chi2=0.11)
[2025-10-12 11:46:46] 2025-10-12 15:45:58,920 | INFO     | could have reported an average CPU frequency of 2595 MHz (12 samples)
[2025-10-12 11:46:46] 2025-10-12 15:45:58,921 | INFO     | ..............................
[2025-10-12 11:46:46] 2025-10-12 15:45:58,921 | INFO     | . Timing measurements:
[2025-10-12 11:46:46] 2025-10-12 15:45:58,921 | INFO     | . get job = 0 s
[2025-10-12 11:46:46] 2025-10-12 15:45:58,921 | INFO     | . initial setup = 5 s
[2025-10-12 11:46:46] 2025-10-12 15:45:58,921 | INFO     | . payload setup = 15 s
[2025-10-12 11:46:46] 2025-10-12 15:45:58,921 | INFO     | . stage-in = 0 s
[2025-10-12 11:46:46] 2025-10-12 15:45:58,921 | INFO     | . payload execution = 16299 s
[2025-10-12 11:46:46] 2025-10-12 15:45:58,921 | INFO     | . stage-out = 2 s
[2025-10-12 11:46:46] 2025-10-12 15:45:58,922 | INFO     | . log creation = 0 s
[2025-10-12 11:46:46] 2025-10-12 15:45:58,922 | INFO     | ..............................
[2025-10-12 11:46:46] 2025-10-12 15:45:59,045 | INFO     | 
[2025-10-12 11:46:46] 2025-10-12 15:45:59,045 | INFO     | job summary report
[2025-10-12 11:46:46] 2025-10-12 15:45:59,045 | INFO     | --------------------------------------------------
[2025-10-12 11:46:46] 2025-10-12 15:45:59,045 | INFO     | PanDA job id: 6838990865
[2025-10-12 11:46:46] 2025-10-12 15:45:59,046 | INFO     | task id: 46676269
[2025-10-12 11:46:46] 2025-10-12 15:45:59,046 | INFO     | errors: (none)
[2025-10-12 11:46:46] 2025-10-12 15:45:59,046 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 11:46:46] 2025-10-12 15:45:59,046 | INFO     | pilot state: finished 
[2025-10-12 11:46:46] 2025-10-12 15:45:59,046 | INFO     | transexitcode: 0
[2025-10-12 11:46:46] 2025-10-12 15:45:59,046 | INFO     | exeerrorcode: 0
[2025-10-12 11:46:46] 2025-10-12 15:45:59,046 | INFO     | exeerrordiag: 
[2025-10-12 11:46:46] 2025-10-12 15:45:59,046 | INFO     | exitcode: 0
[2025-10-12 11:46:46] 2025-10-12 15:45:59,046 | INFO     | exitmsg: OK
[2025-10-12 11:46:46] 2025-10-12 15:45:59,046 | INFO     | cpuconsumptiontime: 52579 s
[2025-10-12 11:46:46] 2025-10-12 15:45:59,047 | INFO     | nevents: 400
[2025-10-12 11:46:46] 2025-10-12 15:45:59,047 | INFO     | neventsw: 0
[2025-10-12 11:46:46] 2025-10-12 15:45:59,047 | INFO     | pid: 2985266
[2025-10-12 11:46:46] 2025-10-12 15:45:59,047 | INFO     | pgrp: 2985266
[2025-10-12 11:46:46] 2025-10-12 15:45:59,047 | INFO     | corecount: 8
[2025-10-12 11:46:46] 2025-10-12 15:45:59,047 | INFO     | event service: False
[2025-10-12 11:46:46] 2025-10-12 15:45:59,047 | INFO     | sizes: {0: 2348029, 1: 2348714, 2: 2348742, 3: 2348941, 4: 2348941, 14: 2348969, 17: 2349387, 25: 2349415, 16318: 2381299, 16319: 2381298, 16323: 2390352, 16324: 2
[2025-10-12 11:46:46] 2025-10-12 15:45:59,047 | INFO     | --------------------------------------------------
[2025-10-12 11:46:46] 2025-10-12 15:45:59,047 | INFO     | 
[2025-10-12 11:46:46] 2025-10-12 15:45:59,047 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-12 11:46:46] 2025-10-12 15:45:59,070 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 11:46:46] 2025-10-12 15:45:59,070 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 11:46:46] 2025-10-12 15:45:59,070 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 11:46:46] 2025-10-12 15:45:59,071 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 11:46:46] 2025-10-12 15:45:59,071 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 11:46:46] 2025-10-12 15:45:59,071 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 11:46:46] 2025-10-12 15:45:59,071 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 11:46:46] 2025-10-12 15:45:59,071 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 11:46:46] 2025-10-12 15:45:59,071 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 11:46:46] 2025-10-12 15:45:59,071 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 11:46:46] 2025-10-12 15:45:59,071 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 11:46:46] 2025-10-12 15:45:59,071 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 11:46:46] 2025-10-12 15:45:59,072 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 11:46:46] 2025-10-12 15:45:59,072 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 11:46:46] 2025-10-12 15:45:59,072 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 11:46:46] 2025-10-12 15:45:59,072 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 11:46:46] 2025-10-12 15:45:59,072 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 11:46:46] 2025-10-12 15:45:59,072 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 11:46:46] 2025-10-12 15:45:59,072 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 11:46:46] 2025-10-12 15:45:59,072 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 11:46:46] 2025-10-12 15:45:59,073 | INFO     | job 6838990865 has completed (purged errors)
[2025-10-12 11:46:46] 2025-10-12 15:45:59,073 | INFO     | overall cleanup function is called
[2025-10-12 11:46:46] 2025-10-12 15:46:00,084 | INFO     | --- collectZombieJob: --- 10, [2985266]
[2025-10-12 11:46:46] 2025-10-12 15:46:00,084 | INFO     | zombie collector waiting for pid 2985266
[2025-10-12 11:46:46] 2025-10-12 15:46:00,085 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 11:46:46] 2025-10-12 15:46:00,085 | INFO     | collected zombie processes
[2025-10-12 11:46:46] 2025-10-12 15:46:00,085 | INFO     | will attempt to kill all subprocesses of pid=2985266
[2025-10-12 11:46:46] 2025-10-12 15:46:00,696 | INFO     | process IDs to be killed: [2985266] (in reverse order)
[2025-10-12 11:46:46] 2025-10-12 15:46:00,785 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 11:46:46] 2025-10-12 15:46:00,785 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 11:46:46] 2025-10-12 15:46:00,795 | INFO     | did not find any defunct processes belonging to 2985266
[2025-10-12 11:46:46] 2025-10-12 15:46:00,805 | INFO     | did not find any defunct processes belonging to 2985266
[2025-10-12 11:46:46] 2025-10-12 15:46:00,805 | INFO     | ready for new job
[2025-10-12 11:46:46] 2025-10-12 15:46:00,805 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 11:46:46] 2025-10-12 15:46:00,808 | INFO     | ***************************************
[2025-10-12 11:46:46] 2025-10-12 15:46:00,808 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 11:46:46] 2025-10-12 15:46:00,809 | INFO     | ***************************************
[2025-10-12 11:46:46] 2025-10-12 15:46:00,809 | INFO     | 
[2025-10-12 11:46:46] 2025-10-12 15:46:00,811 | INFO     | architecture information:
[2025-10-12 11:46:46] 2025-10-12 15:46:00,811 | INFO     | executing command: cat /etc/os-release
[2025-10-12 11:46:46] 2025-10-12 15:46:00,976 | INFO     | cat /etc/os-release:
[2025-10-12 11:46:46] NAME="CentOS Linux"
[2025-10-12 11:46:46] VERSION="7 (Core)"
[2025-10-12 11:46:46] ID="centos"
[2025-10-12 11:46:46] ID_LIKE="rhel fedora"
[2025-10-12 11:46:46] VERSION_ID="7"
[2025-10-12 11:46:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 11:46:46] ANSI_COLOR="0;31"
[2025-10-12 11:46:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 11:46:46] HOME_URL="https://www.centos.org/"
[2025-10-12 11:46:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 11:46:46] 
[2025-10-12 11:46:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 11:46:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 11:46:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 11:46:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 11:46:46] 
[2025-10-12 11:46:46] 2025-10-12 15:46:00,977 | INFO     | ***************************************
[2025-10-12 11:46:46] 2025-10-12 15:46:01,480 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-12 11:46:46] 2025-10-12 15:46:01,518 | INFO     | sufficient remaining disk space (53099888640 B)
[2025-10-12 11:46:46] 2025-10-12 15:46:01,518 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 11:46:46] 2025-10-12 15:46:01,519 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 11:46:46] 2025-10-12 15:46:01,519 | INFO     | update_server=False
[2025-10-12 11:46:46] 2025-10-12 15:46:01,519 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 11:46:46] 2025-10-12 15:46:01,520 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 11:46:46] 2025-10-12 15:46:01,710 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 11:46:46] 2025-10-12 15:46:01,710 | INFO     | aborting loop
[2025-10-12 11:46:46] 2025-10-12 15:46:02,030 | INFO     | all data control threads have been joined
[2025-10-12 11:46:46] 2025-10-12 15:46:02,090 | INFO     | all job control threads have been joined
[2025-10-12 11:46:46] 2025-10-12 15:46:02,298 | INFO     | all payload control threads have been joined
[2025-10-12 11:46:46] 2025-10-12 15:46:02,525 | INFO     | [job] retrieve thread has finished
[2025-10-12 11:46:46] 2025-10-12 15:46:02,657 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 11:46:46] 2025-10-12 15:46:02,714 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 11:46:46] 2025-10-12 15:46:02,716 | INFO     | [job] job monitor thread has finished
[2025-10-12 11:46:46] 2025-10-12 15:46:02,756 | INFO     | [payload] validate_post thread has finished
[2025-10-12 11:46:46] 2025-10-12 15:46:03,035 | INFO     | [data] control thread has finished
[2025-10-12 11:46:46] 2025-10-12 15:46:03,096 | INFO     | [job] control thread has finished
[2025-10-12 11:46:46] 2025-10-12 15:46:03,194 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 11:46:46] 2025-10-12 15:46:03,287 | INFO     | [payload] failed_post thread has finished
[2025-10-12 11:46:46] 2025-10-12 15:46:03,303 | INFO     | [payload] control thread has finished
[2025-10-12 11:46:46] 2025-10-12 15:46:03,527 | INFO     | [data] copytool_out thread has finished
[2025-10-12 11:46:46] 2025-10-12 15:46:03,726 | INFO     | [data] copytool_in thread has finished
[2025-10-12 11:46:46] 2025-10-12 15:46:03,795 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 11:46:46] 2025-10-12 15:46:03,825 | INFO     | [job] validate thread has finished
[2025-10-12 11:46:46] 2025-10-12 15:46:03,831 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 11:46:46] 2025-10-12 15:46:04,059 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 11:46:46] 2025-10-12 15:46:05,068 | INFO     | [job] queue monitor thread has finished
[2025-10-12 11:46:46] 2025-10-12 15:46:06,722 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 11:46:46] 2025-10-12 15:46:30,826 | INFO     | PID=2971715 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 11:46:46] 2025-10-12 15:46:30,826 | INFO     | .. there are 7 such processes running
[2025-10-12 11:46:46] 2025-10-12 15:46:30,828 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 11:46:46] 2025-10-12 15:46:30,828 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 11:46:46] 2025-10-12 15:46:30,828 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 11:46:46] 2025-10-12 15:46:39,052 | INFO     | [monitor] cgroup control has ended
[2025-10-12 11:46:46] 2025-10-12 15:46:40,446 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140330772924224)>', '<ExcThread(monitor, started 140329936221952)>']
[2025-10-12 11:46:46] 2025-10-12 15:46:40,896 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 11:46:46] 2025-10-12 15:46:40,896 | INFO     | [monitor] control thread has ended
[2025-10-12 11:46:46] 2025-10-12 15:46:45,472 | INFO     | all workflow threads have been joined
[2025-10-12 11:46:46] 2025-10-12 15:46:45,472 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 11:46:46] 2025-10-12 15:46:45,473 | INFO     | traces error code: 0
[2025-10-12 11:46:46] 2025-10-12 15:46:45,473 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 11:46:46] 2025-10-12 15:46:45,722 [wrapper] ==== pilot stdout END ====
[2025-10-12 11:46:46] 2025-10-12 15:46:45,744 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 11:46:46] 2025-10-12 15:46:45,774 [wrapper] pilotpid: 2971715
[2025-10-12 11:46:46] 2025-10-12 15:46:45,778 [wrapper] Pilot exit status: 0
[2025-10-12 11:46:46] 2025-10-12 15:46:45,886 [wrapper] pandaids: 6838990865 6838990865
[2025-10-12 11:46:46] 2025-10-12 15:46:45,963 [wrapper] cleanup supervisor_pilot 3365756 2971716
[2025-10-12 11:46:46] 2025-10-12 15:46:45,966 [wrapper] Test setup, not cleaning
[2025-10-12 11:46:46] 2025-10-12 15:46:45,970 [wrapper] apfmon messages muted
[2025-10-12 11:46:46] 2025-10-12 15:46:45,973 [wrapper] ==== wrapper stdout END ====
[2025-10-12 11:46:46] 2025-10-12 15:46:45,976 [wrapper] ==== wrapper stderr END ====
[2025-10-12 11:46:46]  *** Error codes and diagnostics ***
[2025-10-12 11:46:46]     "exeErrorCode": 0,
[2025-10-12 11:46:46]     "exeErrorDiag": "",
[2025-10-12 11:46:46]     "pilotErrorCode": 0,
[2025-10-12 11:46:46]     "pilotErrorDiag": "",
[2025-10-12 11:46:46]  *** Listing of results directory ***
[2025-10-12 11:46:46] total 632908
[2025-10-12 11:46:46] drwx------. 5 boincer umatlas      4096 Oct  7 03:00 pilot3
[2025-10-12 11:46:46] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 18:51 pilot3.tar.gz
[2025-10-12 11:46:46] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 18:57 queuedata.json
[2025-10-12 11:46:46] -rwx------. 1 boincer umatlas     36292 Oct 11 18:57 runpilot2-wrapper.sh
[2025-10-12 11:46:46] -rw-r--r--. 1 boincer umatlas       100 Oct 12 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 11:46:46] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 00:03 run_atlas
[2025-10-12 11:46:46] -rw-r--r--. 1 boincer umatlas       105 Oct 12 00:03 job.xml
[2025-10-12 11:46:46] -rw-r--r--. 3 boincer umatlas 223496834 Oct 12 00:03 EVNT.46676267._002673.pool.root.1
[2025-10-12 11:46:46] -rw-r--r--. 3 boincer umatlas 223496834 Oct 12 00:03 ATLAS.root_0
[2025-10-12 11:46:46] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:03 start_atlas.sh
[2025-10-12 11:46:46] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 00:03 shared
[2025-10-12 11:46:46] -rw-r--r--. 2 boincer umatlas    569683 Oct 12 00:03 input.tar.gz
[2025-10-12 11:46:46] -rw-r--r--. 1 boincer umatlas         0 Oct 12 00:03 boinc_lockfile
[2025-10-12 11:46:46] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 07:12 pandaJob.out
[2025-10-12 11:46:46] -rw-------. 1 boincer umatlas    975520 Oct 12 07:13 agis_schedconf.cvmfs.json
[2025-10-12 11:46:46] -rw-------. 1 boincer umatlas 191917410 Oct 12 11:45 HITS.46676269._066354.pool.root.1
[2025-10-12 11:46:46] -rw-r--r--. 1 boincer umatlas       531 Oct 12 11:45 boinc_task_state.xml
[2025-10-12 11:46:46] -rw-r--r--. 1 boincer umatlas      6660 Oct 12 11:45 init_data.xml
[2025-10-12 11:46:46] -rw-------. 1 boincer umatlas      1066 Oct 12 11:45 memory_monitor_summary.json
[2025-10-12 11:46:46] -rw-------. 1 boincer umatlas   1560580 Oct 12 11:45 agis_ddmendpoints.agis.ALL.json
[2025-10-12 11:46:46] -rw-------. 1 boincer umatlas    494729 Oct 12 11:45 log.46676269._066354.job.log.tgz.1
[2025-10-12 11:46:46] -rw-------. 1 boincer umatlas      7848 Oct 12 11:45 heartbeat.json
[2025-10-12 11:46:46] -rw-------. 1 boincer umatlas        96 Oct 12 11:46 pilot_heartbeat.json
[2025-10-12 11:46:46] -rw-r--r--. 1 boincer umatlas        28 Oct 12 11:46 wrapper_checkpoint.txt
[2025-10-12 11:46:46] -rw-------. 1 boincer umatlas      4823 Oct 12 11:46 pilotlog.txt
[2025-10-12 11:46:46] -rw-------. 1 boincer umatlas   2146540 Oct 12 11:46 log.46676269._066354.job.log.1
[2025-10-12 11:46:46] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 11:46 boinc_mmap_file
[2025-10-12 11:46:46] -rw-------. 1 boincer umatlas       357 Oct 12 11:46 output.list
[2025-10-12 11:46:46] -rw-r--r--. 1 boincer umatlas       620 Oct 12 11:46 runtime_log
[2025-10-12 11:46:46] -rw-------. 1 boincer umatlas   2662400 Oct 12 11:46 result.tar.gz
[2025-10-12 11:46:46] -rw-r--r--. 1 boincer umatlas      8784 Oct 12 11:46 runtime_log.err
[2025-10-12 11:46:46] -rw-------. 1 boincer umatlas       785 Oct 12 11:46 qIzKDmKixR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm6qhNDmM4xemm.diag
[2025-10-12 11:46:46] -rw-r--r--. 1 boincer umatlas     23420 Oct 12 11:46 stderr.txt
[2025-10-12 11:46:46] HITS file was successfully produced:
[2025-10-12 11:46:46] -rw-------. 1 boincer umatlas 191917410 Oct 12 11:45 shared/HITS.pool.root.1
[2025-10-12 11:46:46]  *** Contents of shared directory: ***
[2025-10-12 11:46:46] total 408860
[2025-10-12 11:46:46] -rw-r--r--. 3 boincer umatlas 223496834 Oct 12 00:03 ATLAS.root_0
[2025-10-12 11:46:46] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:03 start_atlas.sh
[2025-10-12 11:46:46] -rw-r--r--. 2 boincer umatlas    569683 Oct 12 00:03 input.tar.gz
[2025-10-12 11:46:46] -rw-------. 1 boincer umatlas 191917410 Oct 12 11:45 HITS.pool.root.1
[2025-10-12 11:46:46] -rw-------. 1 boincer umatlas   2662400 Oct 12 11:46 result.tar.gz
11:47:07 (2964547): run_atlas exited; CPU time 52937.060495
11:47:07 (2964547): called boinc_finish(0)

</stderr_txt>
]]>

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