Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:00 (270964): wrapper (7.7.26015): starting
00:03:00 (270964): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 00:03:00] Arguments: --nthreads 8
[2025-10-12 00:03:00] Threads: 8
[2025-10-12 00:03:00] Checking for CVMFS
[2025-10-12 00:03:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 00:03:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 00:03:02] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 00:03:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 00:03:03] 2.13.2.0 231297 52155 360184 151606 1 598 34940370 40960001 24492 16776704 0 132434754 99.636 127805129 29322 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 00:03:03] CVMFS is ok
[2025-10-12 00:03:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 00:03:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 00:03:03] Further information can be found at the LHC@home message board.
[2025-10-12 00:03:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 00:03:03] Checking for apptainer binary...
[2025-10-12 00:03:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 00:03:03] Running /usr/bin/apptainer --version
[2025-10-12 00:03:03] apptainer version 1.4.3-1.el9
[2025-10-12 00:03:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 00:03:04] c6-5-7-4.aglt2.org
[2025-10-12 00:03:04] apptainer works
[2025-10-12 00:03:04] Set ATHENA_PROC_NUMBER=8
[2025-10-12 00:03:04] Set ATHENA_CORE_NUMBER=8
[2025-10-12 00:03:04] Starting ATLAS job with PandaID=6838990395
[2025-10-12 00:03:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 10:29:41]  *** The last 200 lines of the pilot log: ***
[2025-10-12 10:29:41] 2025-10-12 14:28:56,719 | INFO     | intersect: -9773750121.245903
[2025-10-12 10:29:41] 2025-10-12 14:28:56,720 | INFO     | chi2: 3.939769084896124
[2025-10-12 10:29:41] 2025-10-12 14:28:56,720 | INFO     | current chi2=3.939769084896124 (change=-0.012195259810325558 %)
[2025-10-12 10:29:41] 2025-10-12 14:28:56,720 | INFO     | right removable region: 605
[2025-10-12 10:29:41] 2025-10-12 14:28:56,721 | INFO     | sum of square deviations: 69003644256.81187
[2025-10-12 10:29:41] 2025-10-12 14:28:56,727 | INFO     | sum of deviations: 199930093631.77243
[2025-10-12 10:29:41] 2025-10-12 14:28:56,727 | INFO     | mean x: 1760260810.8910892
[2025-10-12 10:29:41] 2025-10-12 14:28:56,727 | INFO     | mean y: 2498310.587458746
[2025-10-12 10:29:41] 2025-10-12 14:28:56,727 | INFO     | -- intersect: -5097654189.011191
[2025-10-12 10:29:41] 2025-10-12 14:28:56,727 | INFO     | intersect: -5097654189.011191
[2025-10-12 10:29:41] 2025-10-12 14:28:56,728 | INFO     | chi2: 0.464287184914985
[2025-10-12 10:29:41] 2025-10-12 14:28:56,728 | INFO     | current chi2=0.464287184914985 (change=88.21393345809012 %)
[2025-10-12 10:29:41] 2025-10-12 14:28:56,729 | INFO     | sum of square deviations: 67309521603.54081
[2025-10-12 10:29:41] 2025-10-12 14:28:56,734 | INFO     | sum of deviations: 140693757460.7921
[2025-10-12 10:29:41] 2025-10-12 14:28:56,735 | INFO     | mean x: 1760260963.3943427
[2025-10-12 10:29:41] 2025-10-12 14:28:56,735 | INFO     | mean y: 2503638.2329450916
[2025-10-12 10:29:41] 2025-10-12 14:28:56,735 | INFO     | -- intersect: -3676882623.197205
[2025-10-12 10:29:41] 2025-10-12 14:28:56,735 | INFO     | intersect: -3676882623.197205
[2025-10-12 10:29:41] 2025-10-12 14:28:56,736 | INFO     | chi2: 0.14708606141217628
[2025-10-12 10:29:41] 2025-10-12 14:28:56,736 | INFO     | current chi2=0.14708606141217628 (change=68.32002558091087 %)
[2025-10-12 10:29:41] 2025-10-12 14:28:56,736 | INFO     | sum of square deviations: 65643462579.127556
[2025-10-12 10:29:41] 2025-10-12 14:28:56,743 | INFO     | sum of deviations: 103074554266.45636
[2025-10-12 10:29:41] 2025-10-12 14:28:56,743 | INFO     | mean x: 1760261115.8926175
[2025-10-12 10:29:41] 2025-10-12 14:28:56,744 | INFO     | mean y: 2507078.4446308725
[2025-10-12 10:29:41] 2025-10-12 14:28:56,744 | INFO     | -- intersect: -2761486818.0458007
[2025-10-12 10:29:41] 2025-10-12 14:28:56,744 | INFO     | intersect: -2761486818.0458007
[2025-10-12 10:29:41] 2025-10-12 14:28:56,744 | INFO     | chi2: 0.02248353888556683
[2025-10-12 10:29:41] 2025-10-12 14:28:56,744 | INFO     | current chi2=0.02248353888556683 (change=84.71402478949949 %)
[2025-10-12 10:29:41] 2025-10-12 14:28:56,745 | INFO     | sum of square deviations: 64005125004.71043
[2025-10-12 10:29:41] 2025-10-12 14:28:56,751 | INFO     | sum of deviations: 91668497808.28424
[2025-10-12 10:29:41] 2025-10-12 14:28:56,751 | INFO     | mean x: 1760261268.390863
[2025-10-12 10:29:41] 2025-10-12 14:28:56,751 | INFO     | mean y: 2508137.089678511
[2025-10-12 10:29:41] 2025-10-12 14:28:56,751 | INFO     | -- intersect: -2518547891.027136
[2025-10-12 10:29:41] 2025-10-12 14:28:56,751 | INFO     | intersect: -2518547891.027136
[2025-10-12 10:29:41] 2025-10-12 14:28:56,752 | INFO     | chi2: 0.006793127625648328
[2025-10-12 10:29:41] 2025-10-12 14:28:56,752 | INFO     | current chi2=0.006793127625648328 (change=69.78621710655553 %)
[2025-10-12 10:29:41] 2025-10-12 14:28:56,752 | INFO     | sum of square deviations: 62394385556.10932
[2025-10-12 10:29:41] 2025-10-12 14:28:56,758 | INFO     | sum of deviations: 86518147019.20473
[2025-10-12 10:29:41] 2025-10-12 14:28:56,758 | INFO     | mean x: 1760261420.883959
[2025-10-12 10:29:41] 2025-10-12 14:28:56,758 | INFO     | mean y: 2508624.532423208
[2025-10-12 10:29:41] 2025-10-12 14:28:56,758 | INFO     | -- intersect: -2438328881.0684433
[2025-10-12 10:29:41] 2025-10-12 14:28:56,759 | INFO     | intersect: -2438328881.0684433
[2025-10-12 10:29:41] 2025-10-12 14:28:56,759 | INFO     | chi2: 0.005942300743767991
[2025-10-12 10:29:41] 2025-10-12 14:28:56,759 | INFO     | current chi2=0.005942300743767991 (change=12.524818151037387 %)
[2025-10-12 10:29:41] 2025-10-12 14:28:56,759 | INFO     | left removable region: 50
[2025-10-12 10:29:41] 2025-10-12 14:28:56,760 | INFO     | sum of square deviations: 53006384071.01996
[2025-10-12 10:29:41] 2025-10-12 14:28:56,765 | INFO     | sum of deviations: 72537322569.83061
[2025-10-12 10:29:41] 2025-10-12 14:28:56,765 | INFO     | mean x: 1760262000.381982
[2025-10-12 10:29:41] 2025-10-12 14:28:56,765 | INFO     | mean y: 2509368.463063063
[2025-10-12 10:29:41] 2025-10-12 14:28:56,765 | INFO     | -- intersect: -2406345616.967491
[2025-10-12 10:29:41] 2025-10-12 14:28:56,766 | INFO     | intersect: -2406345616.967491
[2025-10-12 10:29:41] 2025-10-12 14:28:56,766 | INFO     | chi2: 0.004967317700106329
[2025-10-12 10:29:41] 2025-10-12 14:28:56,766 | INFO     | -- intersect: -2406345616.967491
[2025-10-12 10:29:41] 2025-10-12 14:28:56,766 | INFO     | current memory leak: 1.37 B/s (using 555 data points, chi2=0.00)
[2025-10-12 10:29:41] 2025-10-12 14:28:56,767 | INFO     | could have reported an average CPU frequency of 2846 MHz (24 samples)
[2025-10-12 10:29:41] 2025-10-12 14:28:56,767 | INFO     | ..............................
[2025-10-12 10:29:41] 2025-10-12 14:28:56,767 | INFO     | . Timing measurements:
[2025-10-12 10:29:41] 2025-10-12 14:28:56,768 | INFO     | . get job = 0 s
[2025-10-12 10:29:41] 2025-10-12 14:28:56,768 | INFO     | . initial setup = 5 s
[2025-10-12 10:29:41] 2025-10-12 14:28:56,768 | INFO     | . payload setup = 54 s
[2025-10-12 10:29:41] 2025-10-12 14:28:56,768 | INFO     | . stage-in = 0 s
[2025-10-12 10:29:41] 2025-10-12 14:28:56,768 | INFO     | . payload execution = 37309 s
[2025-10-12 10:29:41] 2025-10-12 14:28:56,768 | INFO     | . stage-out = 3 s
[2025-10-12 10:29:41] 2025-10-12 14:28:56,768 | INFO     | . log creation = 0 s
[2025-10-12 10:29:41] 2025-10-12 14:28:56,768 | INFO     | ..............................
[2025-10-12 10:29:41] 2025-10-12 14:28:56,845 | INFO     | 
[2025-10-12 10:29:41] 2025-10-12 14:28:56,845 | INFO     | job summary report
[2025-10-12 10:29:41] 2025-10-12 14:28:56,845 | INFO     | --------------------------------------------------
[2025-10-12 10:29:41] 2025-10-12 14:28:56,845 | INFO     | PanDA job id: 6838990395
[2025-10-12 10:29:41] 2025-10-12 14:28:56,845 | INFO     | task id: 46676269
[2025-10-12 10:29:41] 2025-10-12 14:28:56,845 | INFO     | errors: (none)
[2025-10-12 10:29:41] 2025-10-12 14:28:56,845 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 10:29:41] 2025-10-12 14:28:56,845 | INFO     | pilot state: finished 
[2025-10-12 10:29:41] 2025-10-12 14:28:56,845 | INFO     | transexitcode: 0
[2025-10-12 10:29:41] 2025-10-12 14:28:56,845 | INFO     | exeerrorcode: 0
[2025-10-12 10:29:41] 2025-10-12 14:28:56,845 | INFO     | exeerrordiag: 
[2025-10-12 10:29:41] 2025-10-12 14:28:56,846 | INFO     | exitcode: 0
[2025-10-12 10:29:41] 2025-10-12 14:28:56,846 | INFO     | exitmsg: OK
[2025-10-12 10:29:41] 2025-10-12 14:28:56,846 | INFO     | cpuconsumptiontime: 43963 s
[2025-10-12 10:29:41] 2025-10-12 14:28:56,846 | INFO     | nevents: 400
[2025-10-12 10:29:41] 2025-10-12 14:28:56,847 | INFO     | neventsw: 0
[2025-10-12 10:29:41] 2025-10-12 14:28:56,847 | INFO     | pid: 327078
[2025-10-12 10:29:41] 2025-10-12 14:28:56,847 | INFO     | pgrp: 327078
[2025-10-12 10:29:41] 2025-10-12 14:28:56,847 | INFO     | corecount: 8
[2025-10-12 10:29:41] 2025-10-12 14:28:56,847 | INFO     | event service: False
[2025-10-12 10:29:41] 2025-10-12 14:28:56,847 | INFO     | sizes: {0: 2348686, 1: 2348885, 2: 2348885, 13: 2348913, 24: 2348969, 35: 2348997, 45: 2349415, 47: 2349443, 37368: 2390048, 37372: 2399102, 37382: 2399240}
[2025-10-12 10:29:41] 2025-10-12 14:28:56,847 | INFO     | --------------------------------------------------
[2025-10-12 10:29:41] 2025-10-12 14:28:56,847 | INFO     | 
[2025-10-12 10:29:41] 2025-10-12 14:28:56,847 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-10-12 10:29:41] 2025-10-12 14:28:56,872 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 10:29:41] 2025-10-12 14:28:56,872 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 10:29:41] 2025-10-12 14:28:56,872 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 10:29:41] 2025-10-12 14:28:56,873 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 10:29:41] 2025-10-12 14:28:56,873 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 10:29:41] 2025-10-12 14:28:56,873 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 10:29:41] 2025-10-12 14:28:56,873 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 10:29:41] 2025-10-12 14:28:56,873 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 10:29:41] 2025-10-12 14:28:56,873 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 10:29:41] 2025-10-12 14:28:56,873 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 10:29:41] 2025-10-12 14:28:56,873 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 10:29:41] 2025-10-12 14:28:56,873 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 10:29:41] 2025-10-12 14:28:56,873 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 10:29:41] 2025-10-12 14:28:56,873 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 10:29:41] 2025-10-12 14:28:56,873 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 10:29:41] 2025-10-12 14:28:56,873 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 10:29:41] 2025-10-12 14:28:56,873 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 10:29:41] 2025-10-12 14:28:56,873 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 10:29:41] 2025-10-12 14:28:56,873 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 10:29:41] 2025-10-12 14:28:56,873 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 10:29:41] 2025-10-12 14:28:56,874 | INFO     | job 6838990395 has completed (purged errors)
[2025-10-12 10:29:41] 2025-10-12 14:28:56,874 | INFO     | overall cleanup function is called
[2025-10-12 10:29:41] 2025-10-12 14:28:57,884 | INFO     | --- collectZombieJob: --- 10, [327078]
[2025-10-12 10:29:41] 2025-10-12 14:28:57,884 | INFO     | zombie collector waiting for pid 327078
[2025-10-12 10:29:41] 2025-10-12 14:28:57,884 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 10:29:41] 2025-10-12 14:28:57,884 | INFO     | collected zombie processes
[2025-10-12 10:29:41] 2025-10-12 14:28:57,884 | INFO     | will attempt to kill all subprocesses of pid=327078
[2025-10-12 10:29:41] 2025-10-12 14:28:58,209 | INFO     | process IDs to be killed: [327078] (in reverse order)
[2025-10-12 10:29:41] 2025-10-12 14:28:58,452 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 10:29:41] 2025-10-12 14:28:58,453 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 10:29:41] 2025-10-12 14:28:58,482 | INFO     | did not find any defunct processes belonging to 327078
[2025-10-12 10:29:41] 2025-10-12 14:28:58,506 | INFO     | did not find any defunct processes belonging to 327078
[2025-10-12 10:29:41] 2025-10-12 14:28:58,507 | INFO     | ready for new job
[2025-10-12 10:29:41] 2025-10-12 14:28:58,507 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 10:29:41] 2025-10-12 14:28:58,522 | INFO     | ***************************************
[2025-10-12 10:29:41] 2025-10-12 14:28:58,522 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 10:29:41] 2025-10-12 14:28:58,522 | INFO     | ***************************************
[2025-10-12 10:29:41] 2025-10-12 14:28:58,522 | INFO     | 
[2025-10-12 10:29:41] 2025-10-12 14:28:58,533 | INFO     | architecture information:
[2025-10-12 10:29:41] 2025-10-12 14:28:58,537 | INFO     | executing command: cat /etc/os-release
[2025-10-12 10:29:41] 2025-10-12 14:28:58,624 | INFO     | cat /etc/os-release:
[2025-10-12 10:29:41] NAME="CentOS Linux"
[2025-10-12 10:29:41] VERSION="7 (Core)"
[2025-10-12 10:29:41] ID="centos"
[2025-10-12 10:29:41] ID_LIKE="rhel fedora"
[2025-10-12 10:29:41] VERSION_ID="7"
[2025-10-12 10:29:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 10:29:41] ANSI_COLOR="0;31"
[2025-10-12 10:29:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 10:29:41] HOME_URL="https://www.centos.org/"
[2025-10-12 10:29:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 10:29:41] 
[2025-10-12 10:29:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 10:29:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 10:29:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 10:29:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 10:29:41] 
[2025-10-12 10:29:41] 2025-10-12 14:28:58,625 | INFO     | ***************************************
[2025-10-12 10:29:41] 2025-10-12 14:28:59,127 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-10-12 10:29:41] 2025-10-12 14:28:59,178 | INFO     | sufficient remaining disk space (74191994880 B)
[2025-10-12 10:29:41] 2025-10-12 14:28:59,179 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 10:29:41] 2025-10-12 14:28:59,179 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 10:29:41] 2025-10-12 14:28:59,179 | INFO     | update_server=False
[2025-10-12 10:29:41] 2025-10-12 14:28:59,179 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 10:29:41] 2025-10-12 14:28:59,181 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 10:29:41] 2025-10-12 14:28:59,181 | INFO     | aborting loop
[2025-10-12 10:29:41] 2025-10-12 14:28:59,181 | INFO     | all job control threads have been joined
[2025-10-12 10:29:41] 2025-10-12 14:28:59,192 | INFO     | all data control threads have been joined
[2025-10-12 10:29:41] 2025-10-12 14:28:59,485 | INFO     | all payload control threads have been joined
[2025-10-12 10:29:41] 2025-10-12 14:28:59,649 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 10:29:41] 2025-10-12 14:29:00,185 | INFO     | [job] retrieve thread has finished
[2025-10-12 10:29:41] 2025-10-12 14:29:00,187 | INFO     | [job] job monitor thread has finished
[2025-10-12 10:29:41] 2025-10-12 14:29:00,190 | INFO     | [job] control thread has finished
[2025-10-12 10:29:41] 2025-10-12 14:29:00,198 | INFO     | [data] control thread has finished
[2025-10-12 10:29:41] 2025-10-12 14:29:00,323 | INFO     | [payload] validate_post thread has finished
[2025-10-12 10:29:41] 2025-10-12 14:29:00,488 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 10:29:41] 2025-10-12 14:29:00,491 | INFO     | [payload] control thread has finished
[2025-10-12 10:29:41] 2025-10-12 14:29:00,510 | INFO     | [payload] failed_post thread has finished
[2025-10-12 10:29:41] 2025-10-12 14:29:00,789 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 10:29:41] 2025-10-12 14:29:00,790 | INFO     | [data] copytool_in thread has finished
[2025-10-12 10:29:41] 2025-10-12 14:29:00,790 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 10:29:41] 2025-10-12 14:29:01,158 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 10:29:41] 2025-10-12 14:29:01,285 | INFO     | [job] validate thread has finished
[2025-10-12 10:29:41] 2025-10-12 14:29:01,655 | INFO     | [data] copytool_out thread has finished
[2025-10-12 10:29:41] 2025-10-12 14:29:01,860 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 10:29:41] 2025-10-12 14:29:02,392 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 10:29:41] 2025-10-12 14:29:02,867 | INFO     | [job] queue monitor thread has finished
[2025-10-12 10:29:41] 2025-10-12 14:29:06,401 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 10:29:41] 2025-10-12 14:29:29,028 | INFO     | PID=286872 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 10:29:41] 2025-10-12 14:29:29,028 | INFO     | .. there are 29 such processes running
[2025-10-12 10:29:41] 2025-10-12 14:29:29,028 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 10:29:41] 2025-10-12 14:29:29,028 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 10:29:41] 2025-10-12 14:29:29,028 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 10:29:41] 2025-10-12 14:29:34,635 | INFO     | [monitor] cgroup control has ended
[2025-10-12 10:29:41] 2025-10-12 14:29:35,732 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140173413095232)>', '<ExcThread(monitor, started 140173060843264)>']
[2025-10-12 10:29:41] 2025-10-12 14:29:36,070 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 10:29:41] 2025-10-12 14:29:36,070 | INFO     | [monitor] control thread has ended
[2025-10-12 10:29:41] 2025-10-12 14:29:40,757 | INFO     | all workflow threads have been joined
[2025-10-12 10:29:41] 2025-10-12 14:29:40,757 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 10:29:41] 2025-10-12 14:29:40,757 | INFO     | traces error code: 0
[2025-10-12 10:29:41] 2025-10-12 14:29:40,757 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 10:29:41] 2025-10-12 14:29:40,924 [wrapper] ==== pilot stdout END ====
[2025-10-12 10:29:41] 2025-10-12 14:29:40,927 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 10:29:41] 2025-10-12 14:29:40,930 [wrapper] pilotpid: 286872
[2025-10-12 10:29:41] 2025-10-12 14:29:40,935 [wrapper] Pilot exit status: 0
[2025-10-12 10:29:41] 2025-10-12 14:29:40,950 [wrapper] pandaids: 6838990395
[2025-10-12 10:29:41] 2025-10-12 14:29:41,017 [wrapper] cleanup supervisor_pilot 2160123 286873
[2025-10-12 10:29:41] 2025-10-12 14:29:41,021 [wrapper] Test setup, not cleaning
[2025-10-12 10:29:41] 2025-10-12 14:29:41,025 [wrapper] apfmon messages muted
[2025-10-12 10:29:41] 2025-10-12 14:29:41,030 [wrapper] ==== wrapper stdout END ====
[2025-10-12 10:29:41] 2025-10-12 14:29:41,033 [wrapper] ==== wrapper stderr END ====
[2025-10-12 10:29:41]  *** Error codes and diagnostics ***
[2025-10-12 10:29:41]     "exeErrorCode": 0,
[2025-10-12 10:29:41]     "exeErrorDiag": "",
[2025-10-12 10:29:41]     "pilotErrorCode": 0,
[2025-10-12 10:29:41]     "pilotErrorDiag": "",
[2025-10-12 10:29:41]  *** Listing of results directory ***
[2025-10-12 10:29:41] total 422484
[2025-10-12 10:29:41] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 18:04 pilot3.tar.gz
[2025-10-12 10:29:41] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 18:20 queuedata.json
[2025-10-12 10:29:41] -rwx------. 1 boincer umatlas     36292 Oct 11 18:20 runpilot2-wrapper.sh
[2025-10-12 10:29:41] -rw-r--r--. 1 boincer umatlas       100 Oct 12 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 10:29:41] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 00:02 run_atlas
[2025-10-12 10:29:41] -rw-r--r--. 1 boincer umatlas       105 Oct 12 00:02 job.xml
[2025-10-12 10:29:41] -rw-r--r--. 2 boincer umatlas 220698080 Oct 12 00:03 EVNT.46676267._002655.pool.root.1
[2025-10-12 10:29:41] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:03 start_atlas.sh
[2025-10-12 10:29:41] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 00:03 shared
[2025-10-12 10:29:41] -rw-r--r--. 2 boincer umatlas    569680 Oct 12 00:03 input.tar.gz
[2025-10-12 10:29:41] -rw-r--r--. 1 boincer umatlas         0 Oct 12 00:03 boinc_lockfile
[2025-10-12 10:29:41] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 00:03 pandaJob.out
[2025-10-12 10:29:41] -rw-------. 1 boincer umatlas    975512 Oct 12 00:04 agis_schedconf.cvmfs.json
[2025-10-12 10:29:41] drwx------. 5 boincer umatlas      4096 Oct 12 00:04 pilot3
[2025-10-12 10:29:41] -rw-r--r--. 1 boincer umatlas      6842 Oct 12 10:27 init_data.xml
[2025-10-12 10:29:41] -rw-------. 1 boincer umatlas 197957675 Oct 12 10:28 HITS.46676269._066048.pool.root.1
[2025-10-12 10:29:41] -rw-r--r--. 1 boincer umatlas       531 Oct 12 10:28 boinc_task_state.xml
[2025-10-12 10:29:41] -rw-------. 1 boincer umatlas      1042 Oct 12 10:28 memory_monitor_summary.json
[2025-10-12 10:29:41] -rw-------. 1 boincer umatlas   1560580 Oct 12 10:28 agis_ddmendpoints.agis.ALL.json
[2025-10-12 10:29:41] -rw-------. 1 boincer umatlas    729733 Oct 12 10:28 log.46676269._066048.job.log.tgz.1
[2025-10-12 10:29:41] -rw-------. 1 boincer umatlas        95 Oct 12 10:28 pilot_heartbeat.json
[2025-10-12 10:29:41] -rw-------. 1 boincer umatlas      7825 Oct 12 10:28 heartbeat.json
[2025-10-12 10:29:41] -rw-r--r--. 1 boincer umatlas        28 Oct 12 10:29 wrapper_checkpoint.txt
[2025-10-12 10:29:41] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 10:29 boinc_mmap_file
[2025-10-12 10:29:41] -rw-------. 1 boincer umatlas      4823 Oct 12 10:29 pilotlog.txt
[2025-10-12 10:29:41] -rw-------. 1 boincer umatlas   4297391 Oct 12 10:29 log.46676269._066048.job.log.1
[2025-10-12 10:29:41] -rw-------. 1 boincer umatlas       357 Oct 12 10:29 output.list
[2025-10-12 10:29:41] -rw-r--r--. 1 boincer umatlas       620 Oct 12 10:29 runtime_log
[2025-10-12 10:29:41] -rw-------. 1 boincer umatlas   5048320 Oct 12 10:29 result.tar.gz
[2025-10-12 10:29:41] -rw-------. 1 boincer umatlas       657 Oct 12 10:29 x8tLDm17wR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm6nhNDmgVkWPm.diag
[2025-10-12 10:29:41] -rw-r--r--. 1 boincer umatlas      8704 Oct 12 10:29 runtime_log.err
[2025-10-12 10:29:41] -rw-r--r--. 1 boincer umatlas     21051 Oct 12 10:29 stderr.txt
[2025-10-12 10:29:41] HITS file was successfully produced:
[2025-10-12 10:29:41] -rw-------. 1 boincer umatlas 197957675 Oct 12 10:28 shared/HITS.pool.root.1
[2025-10-12 10:29:41]  *** Contents of shared directory: ***
[2025-10-12 10:29:41] total 414364
[2025-10-12 10:29:41] -rw-r--r--. 2 boincer umatlas 220698080 Oct 12 00:03 ATLAS.root_0
[2025-10-12 10:29:41] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:03 start_atlas.sh
[2025-10-12 10:29:41] -rw-r--r--. 2 boincer umatlas    569680 Oct 12 00:03 input.tar.gz
[2025-10-12 10:29:41] -rw-------. 1 boincer umatlas 197957675 Oct 12 10:28 HITS.pool.root.1
[2025-10-12 10:29:41] -rw-------. 1 boincer umatlas   5048320 Oct 12 10:29 result.tar.gz
10:29:43 (270964): run_atlas exited; CPU time 45336.479849
10:29:43 (270964): called boinc_finish(0)

</stderr_txt>
]]>

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