Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:15 (2979443): wrapper (7.7.26015): starting
00:02:15 (2979443): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 00:02:15] Arguments: --nthreads 12
[2025-10-12 00:02:15] Threads: 12
[2025-10-12 00:02:15] Checking for CVMFS
[2025-10-12 00:02:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 00:02:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 00:02:17] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 00:02:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 00:02:18] 2.13.2.0 4980 36632 301764 151606 3 407 39125597 40960001 14788 16776704 0 70857863 99.828 27628001 39486 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 00:02:18] CVMFS is ok
[2025-10-12 00:02:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 00:02:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 00:02:18] Further information can be found at the LHC@home message board.
[2025-10-12 00:02:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 00:02:18] Checking for apptainer binary...
[2025-10-12 00:02:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 00:02:18] Running /usr/bin/apptainer --version
[2025-10-12 00:02:18] apptainer version 1.4.3-1.el9
[2025-10-12 00:02:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 00:02:18] c-206-40.aglt2.org
[2025-10-12 00:02:18] apptainer works
[2025-10-12 00:02:18] Set ATHENA_PROC_NUMBER=12
[2025-10-12 00:02:18] Set ATHENA_CORE_NUMBER=12
[2025-10-12 00:02:18] Starting ATLAS job with PandaID=6839241501
[2025-10-12 00:02:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 06:35:29]  *** The last 200 lines of the pilot log: ***
[2025-10-12 06:35:29] 2025-10-12 10:34:27,571 | INFO     | intersect: -27902741990.25814
[2025-10-12 06:35:29] 2025-10-12 10:34:27,572 | INFO     | chi2: 7.188056998809299
[2025-10-12 06:35:29] 2025-10-12 10:34:27,572 | INFO     | sum of square deviations: 16482080396.212791
[2025-10-12 06:35:29] 2025-10-12 10:34:27,585 | INFO     | sum of deviations: 292535694712.46826
[2025-10-12 06:35:29] 2025-10-12 10:34:27,585 | INFO     | mean x: 1760253426.3085105
[2025-10-12 06:35:29] 2025-10-12 10:34:27,585 | INFO     | mean y: 2624483.2287234045
[2025-10-12 06:35:29] 2025-10-12 10:34:27,585 | INFO     | -- intersect: -31239606264.14001
[2025-10-12 06:35:29] 2025-10-12 10:34:27,585 | INFO     | intersect: -31239606264.14001
[2025-10-12 06:35:29] 2025-10-12 10:34:27,585 | INFO     | chi2: 6.506513023732782
[2025-10-12 06:35:29] 2025-10-12 10:34:27,585 | INFO     | current chi2=6.506513023732782 (change=9.481616175127918 %)
[2025-10-12 06:35:29] 2025-10-12 10:34:27,586 | INFO     | right removable region: 375
[2025-10-12 06:35:29] 2025-10-12 10:34:27,586 | INFO     | sum of square deviations: 16481917586.593058
[2025-10-12 06:35:29] 2025-10-12 10:34:27,596 | INFO     | sum of deviations: 136025360311.60648
[2025-10-12 06:35:29] 2025-10-12 10:34:27,596 | INFO     | mean x: 1760253731.31117
[2025-10-12 06:35:29] 2025-10-12 10:34:27,596 | INFO     | mean y: 2650875.712765957
[2025-10-12 06:35:29] 2025-10-12 10:34:27,596 | INFO     | -- intersect: -14524733258.049644
[2025-10-12 06:35:29] 2025-10-12 10:34:27,596 | INFO     | intersect: -14524733258.049644
[2025-10-12 06:35:29] 2025-10-12 10:34:27,597 | INFO     | chi2: 2.9102446926202425
[2025-10-12 06:35:29] 2025-10-12 10:34:27,597 | INFO     | current chi2=2.9102446926202425 (change=59.51277663626868 %)
[2025-10-12 06:35:29] 2025-10-12 10:34:27,597 | INFO     | sum of square deviations: 15832956578.258713
[2025-10-12 06:35:29] 2025-10-12 10:34:27,608 | INFO     | sum of deviations: 47406171033.24255
[2025-10-12 06:35:29] 2025-10-12 10:34:27,608 | INFO     | mean x: 1760253883.8221023
[2025-10-12 06:35:29] 2025-10-12 10:34:27,608 | INFO     | mean y: 2671670.4582210244
[2025-10-12 06:35:29] 2025-10-12 10:34:27,608 | INFO     | -- intersect: -5267784056.868571
[2025-10-12 06:35:29] 2025-10-12 10:34:27,608 | INFO     | intersect: -5267784056.868571
[2025-10-12 06:35:29] 2025-10-12 10:34:27,609 | INFO     | chi2: 1.1280453613416426
[2025-10-12 06:35:29] 2025-10-12 10:34:27,609 | INFO     | current chi2=1.1280453613416426 (change=61.23881389760373 %)
[2025-10-12 06:35:29] 2025-10-12 10:34:27,609 | INFO     | sum of square deviations: 15201274338.997265
[2025-10-12 06:35:29] 2025-10-12 10:34:27,620 | INFO     | sum of deviations: 6368725186.347012
[2025-10-12 06:35:29] 2025-10-12 10:34:27,620 | INFO     | mean x: 1760254036.330601
[2025-10-12 06:35:29] 2025-10-12 10:34:27,620 | INFO     | mean y: 2681564.013661202
[2025-10-12 06:35:29] 2025-10-12 10:34:27,621 | INFO     | -- intersect: -734794384.7486173
[2025-10-12 06:35:29] 2025-10-12 10:34:27,621 | INFO     | intersect: -734794384.7486173
[2025-10-12 06:35:29] 2025-10-12 10:34:27,621 | INFO     | chi2: 0.7601207015221372
[2025-10-12 06:35:29] 2025-10-12 10:34:27,621 | INFO     | current chi2=0.7601207015221372 (change=32.616122757857326 %)
[2025-10-12 06:35:29] 2025-10-12 10:34:27,621 | INFO     | sum of square deviations: 14586704735.351824
[2025-10-12 06:35:29] 2025-10-12 10:34:27,633 | INFO     | sum of deviations: -2755475515.343479
[2025-10-12 06:35:29] 2025-10-12 10:34:27,633 | INFO     | mean x: 1760254188.828255
[2025-10-12 06:35:29] 2025-10-12 10:34:27,633 | INFO     | mean y: 2683813.994459834
[2025-10-12 06:35:29] 2025-10-12 10:34:27,633 | INFO     | -- intersect: 335201500.8947744
[2025-10-12 06:35:29] 2025-10-12 10:34:27,633 | INFO     | intersect: 335201500.8947744
[2025-10-12 06:35:29] 2025-10-12 10:34:27,637 | INFO     | chi2: 0.7253324313564187
[2025-10-12 06:35:29] 2025-10-12 10:34:27,637 | INFO     | current chi2=0.7253324313564187 (change=4.576677111418647 %)
[2025-10-12 06:35:29] 2025-10-12 10:34:27,637 | INFO     | left removable region: 40
[2025-10-12 06:35:29] 2025-10-12 10:34:27,638 | INFO     | sum of square deviations: 11656632765.600048
[2025-10-12 06:35:29] 2025-10-12 10:34:27,647 | INFO     | sum of deviations: 13604864933.79999
[2025-10-12 06:35:29] 2025-10-12 10:34:27,647 | INFO     | mean x: 1760254615.8
[2025-10-12 06:35:29] 2025-10-12 10:34:27,647 | INFO     | mean y: 2691423.6985074626
[2025-10-12 06:35:29] 2025-10-12 10:34:27,648 | INFO     | -- intersect: -2051763475.8098774
[2025-10-12 06:35:29] 2025-10-12 10:34:27,648 | INFO     | intersect: -2051763475.8098774
[2025-10-12 06:35:29] 2025-10-12 10:34:27,648 | INFO     | chi2: 0.0034186423812796298
[2025-10-12 06:35:29] 2025-10-12 10:34:27,648 | INFO     | -- intersect: -2051763475.8098774
[2025-10-12 06:35:29] 2025-10-12 10:34:27,648 | INFO     | current memory leak: 1.17 B/s (using 335 data points, chi2=0.00)
[2025-10-12 06:35:29] 2025-10-12 10:34:27,649 | INFO     | could have reported an average CPU frequency of 3204 MHz (16 samples)
[2025-10-12 06:35:29] 2025-10-12 10:34:27,649 | INFO     | ..............................
[2025-10-12 06:35:29] 2025-10-12 10:34:27,649 | INFO     | . Timing measurements:
[2025-10-12 06:35:29] 2025-10-12 10:34:27,649 | INFO     | . get job = 0 s
[2025-10-12 06:35:29] 2025-10-12 10:34:27,649 | INFO     | . initial setup = 3 s
[2025-10-12 06:35:29] 2025-10-12 10:34:27,649 | INFO     | . payload setup = 50 s
[2025-10-12 06:35:29] 2025-10-12 10:34:27,649 | INFO     | . stage-in = 0 s
[2025-10-12 06:35:29] 2025-10-12 10:34:27,649 | INFO     | . payload execution = 23249 s
[2025-10-12 06:35:29] 2025-10-12 10:34:27,649 | INFO     | . stage-out = 4 s
[2025-10-12 06:35:29] 2025-10-12 10:34:27,649 | INFO     | . log creation = 1 s
[2025-10-12 06:35:29] 2025-10-12 10:34:27,650 | INFO     | ..............................
[2025-10-12 06:35:29] 2025-10-12 10:34:27,956 | INFO     | time since job start (23448s) is within the limit (172800.0s)
[2025-10-12 06:35:29] 2025-10-12 10:34:28,505 | INFO     | 
[2025-10-12 06:35:29] 2025-10-12 10:34:28,506 | INFO     | job summary report
[2025-10-12 06:35:29] 2025-10-12 10:34:28,506 | INFO     | --------------------------------------------------
[2025-10-12 06:35:29] 2025-10-12 10:34:28,506 | INFO     | PanDA job id: 6839241501
[2025-10-12 06:35:29] 2025-10-12 10:34:28,506 | INFO     | task id: 46676269
[2025-10-12 06:35:29] 2025-10-12 10:34:28,506 | INFO     | errors: (none)
[2025-10-12 06:35:29] 2025-10-12 10:34:28,506 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 06:35:29] 2025-10-12 10:34:28,506 | INFO     | pilot state: finished 
[2025-10-12 06:35:29] 2025-10-12 10:34:28,506 | INFO     | transexitcode: 0
[2025-10-12 06:35:29] 2025-10-12 10:34:28,506 | INFO     | exeerrorcode: 0
[2025-10-12 06:35:29] 2025-10-12 10:34:28,506 | INFO     | exeerrordiag: 
[2025-10-12 06:35:29] 2025-10-12 10:34:28,506 | INFO     | exitcode: 0
[2025-10-12 06:35:29] 2025-10-12 10:34:28,506 | INFO     | exitmsg: OK
[2025-10-12 06:35:29] 2025-10-12 10:34:28,506 | INFO     | cpuconsumptiontime: 34757 s
[2025-10-12 06:35:29] 2025-10-12 10:34:28,506 | INFO     | nevents: 400
[2025-10-12 06:35:29] 2025-10-12 10:34:28,506 | INFO     | neventsw: 0
[2025-10-12 06:35:29] 2025-10-12 10:34:28,507 | INFO     | pid: 3005025
[2025-10-12 06:35:29] 2025-10-12 10:34:28,507 | INFO     | pgrp: 3005025
[2025-10-12 06:35:29] 2025-10-12 10:34:28,507 | INFO     | corecount: 12
[2025-10-12 06:35:29] 2025-10-12 10:34:28,507 | INFO     | event service: False
[2025-10-12 06:35:29] 2025-10-12 10:34:28,507 | INFO     | sizes: {0: 2348630, 1: 2348885, 2: 2348885, 13: 2348913, 24: 2348969, 34: 2348997, 38: 2349415, 45: 2349443, 23304: 2384501, 23305: 2384500, 23310: 2393890, 23368:
[2025-10-12 06:35:29] 2025-10-12 10:34:28,507 | INFO     | --------------------------------------------------
[2025-10-12 06:35:29] 2025-10-12 10:34:28,507 | INFO     | 
[2025-10-12 06:35:29] 2025-10-12 10:34:28,507 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-10-12 06:35:29] 2025-10-12 10:34:28,970 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 06:35:29] 2025-10-12 10:34:28,970 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 06:35:29] 2025-10-12 10:34:28,970 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 06:35:29] 2025-10-12 10:34:28,970 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 06:35:29] 2025-10-12 10:34:28,970 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 06:35:29] 2025-10-12 10:34:28,970 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 06:35:29] 2025-10-12 10:34:28,970 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 06:35:29] 2025-10-12 10:34:28,970 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 06:35:29] 2025-10-12 10:34:28,970 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 06:35:29] 2025-10-12 10:34:28,970 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 06:35:29] 2025-10-12 10:34:28,971 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 06:35:29] 2025-10-12 10:34:28,971 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 06:35:29] 2025-10-12 10:34:28,971 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 06:35:29] 2025-10-12 10:34:28,971 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 06:35:29] 2025-10-12 10:34:28,971 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 06:35:29] 2025-10-12 10:34:28,971 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 06:35:29] 2025-10-12 10:34:28,971 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 06:35:29] 2025-10-12 10:34:28,971 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 06:35:29] 2025-10-12 10:34:28,971 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 06:35:29] 2025-10-12 10:34:28,971 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 06:35:29] 2025-10-12 10:34:28,971 | INFO     | job 6839241501 has completed (purged errors)
[2025-10-12 06:35:29] 2025-10-12 10:34:28,971 | INFO     | overall cleanup function is called
[2025-10-12 06:35:29] 2025-10-12 10:34:30,107 | INFO     | --- collectZombieJob: --- 10, [3005025]
[2025-10-12 06:35:29] 2025-10-12 10:34:30,107 | INFO     | zombie collector waiting for pid 3005025
[2025-10-12 06:35:29] 2025-10-12 10:34:30,107 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 06:35:29] 2025-10-12 10:34:30,107 | INFO     | collected zombie processes
[2025-10-12 06:35:29] 2025-10-12 10:34:30,108 | INFO     | will attempt to kill all subprocesses of pid=3005025
[2025-10-12 06:35:29] 2025-10-12 10:34:30,427 | INFO     | process IDs to be killed: [3005025] (in reverse order)
[2025-10-12 06:35:29] 2025-10-12 10:34:31,250 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 06:35:29] 2025-10-12 10:34:31,250 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 06:35:29] 2025-10-12 10:34:31,264 | INFO     | did not find any defunct processes belonging to 3005025
[2025-10-12 06:35:29] 2025-10-12 10:34:31,376 | INFO     | did not find any defunct processes belonging to 3005025
[2025-10-12 06:35:29] 2025-10-12 10:34:31,377 | INFO     | ready for new job
[2025-10-12 06:35:29] 2025-10-12 10:34:31,378 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 06:35:29] 2025-10-12 10:34:31,385 | INFO     | ***************************************
[2025-10-12 06:35:29] 2025-10-12 10:34:31,385 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 06:35:29] 2025-10-12 10:34:31,386 | INFO     | ***************************************
[2025-10-12 06:35:29] 2025-10-12 10:34:31,386 | INFO     | 
[2025-10-12 06:35:29] 2025-10-12 10:34:31,390 | INFO     | architecture information:
[2025-10-12 06:35:29] 2025-10-12 10:34:31,402 | INFO     | executing command: cat /etc/os-release
[2025-10-12 06:35:29] 2025-10-12 10:34:31,717 | INFO     | cat /etc/os-release:
[2025-10-12 06:35:29] NAME="CentOS Linux"
[2025-10-12 06:35:29] VERSION="7 (Core)"
[2025-10-12 06:35:29] ID="centos"
[2025-10-12 06:35:29] ID_LIKE="rhel fedora"
[2025-10-12 06:35:29] VERSION_ID="7"
[2025-10-12 06:35:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 06:35:29] ANSI_COLOR="0;31"
[2025-10-12 06:35:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 06:35:29] HOME_URL="https://www.centos.org/"
[2025-10-12 06:35:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 06:35:29] 
[2025-10-12 06:35:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 06:35:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 06:35:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 06:35:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 06:35:29] 
[2025-10-12 06:35:29] 2025-10-12 10:34:31,717 | INFO     | ***************************************
[2025-10-12 06:35:29] 2025-10-12 10:34:32,222 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-10-12 06:35:29] 2025-10-12 10:34:32,433 | INFO     | sufficient remaining disk space (85088796672 B)
[2025-10-12 06:35:29] 2025-10-12 10:34:32,433 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 06:35:29] 2025-10-12 10:34:32,433 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 06:35:29] 2025-10-12 10:34:32,433 | INFO     | update_server=False
[2025-10-12 06:35:29] 2025-10-12 10:34:32,433 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 06:35:29] 2025-10-12 10:34:32,669 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 06:35:29] 2025-10-12 10:34:32,669 | INFO     | aborting loop
[2025-10-12 06:35:29] 2025-10-12 10:34:32,958 | INFO     | all data control threads have been joined
[2025-10-12 06:35:29] 2025-10-12 10:34:33,073 | INFO     | all payload control threads have been joined
[2025-10-12 06:35:29] 2025-10-12 10:34:33,220 | INFO     | all job control threads have been joined
[2025-10-12 06:35:29] 2025-10-12 10:34:33,351 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 06:35:29] 2025-10-12 10:34:33,440 | INFO     | [job] retrieve thread has finished
[2025-10-12 06:35:29] 2025-10-12 10:34:33,521 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 06:35:29] 2025-10-12 10:34:33,675 | INFO     | [job] job monitor thread has finished
[2025-10-12 06:35:29] 2025-10-12 10:34:33,822 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 06:35:29] 2025-10-12 10:34:33,879 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 06:35:29] 2025-10-12 10:34:33,886 | INFO     | [payload] validate_post thread has finished
[2025-10-12 06:35:29] 2025-10-12 10:34:33,951 | INFO     | [data] copytool_in thread has finished
[2025-10-12 06:35:29] 2025-10-12 10:34:33,964 | INFO     | [data] control thread has finished
[2025-10-12 06:35:29] 2025-10-12 10:34:34,079 | INFO     | [payload] control thread has finished
[2025-10-12 06:35:29] 2025-10-12 10:34:34,226 | INFO     | [job] control thread has finished
[2025-10-12 06:35:29] 2025-10-12 10:34:34,270 | INFO     | [job] validate thread has finished
[2025-10-12 06:35:29] 2025-10-12 10:34:34,472 | INFO     | [payload] failed_post thread has finished
[2025-10-12 06:35:29] 2025-10-12 10:34:34,527 | INFO     | [job] queue monitor thread has finished
[2025-10-12 06:35:29] 2025-10-12 10:34:34,737 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 06:35:29] 2025-10-12 10:34:34,856 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 06:35:29] 2025-10-12 10:34:35,033 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 06:35:29] 2025-10-12 10:34:35,369 | INFO     | [data] copytool_out thread has finished
[2025-10-12 06:35:29] 2025-10-12 10:34:39,067 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 06:35:29] 2025-10-12 10:35:03,156 | INFO     | PID=2987448 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 06:35:29] 2025-10-12 10:35:03,166 | INFO     | .. there are 11 such processes running
[2025-10-12 06:35:29] 2025-10-12 10:35:03,175 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 06:35:29] 2025-10-12 10:35:03,176 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 06:35:29] 2025-10-12 10:35:03,176 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 06:35:29] 2025-10-12 10:35:19,783 | INFO     | [monitor] cgroup control has ended
[2025-10-12 06:35:29] 2025-10-12 10:35:20,981 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140026509215552)>', '<ExcThread(monitor, started 140025706563328)>']
[2025-10-12 06:35:29] 2025-10-12 10:35:21,318 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 06:35:29] 2025-10-12 10:35:21,320 | INFO     | [monitor] control thread has ended
[2025-10-12 06:35:29] 2025-10-12 10:35:26,008 | INFO     | all workflow threads have been joined
[2025-10-12 06:35:29] 2025-10-12 10:35:26,010 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 06:35:29] 2025-10-12 10:35:26,010 | INFO     | traces error code: 0
[2025-10-12 06:35:29] 2025-10-12 10:35:26,011 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 06:35:29] 2025-10-12 10:35:26,996 [wrapper] ==== pilot stdout END ====
[2025-10-12 06:35:29] 2025-10-12 10:35:27,050 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 06:35:29] 2025-10-12 10:35:27,095 [wrapper] pilotpid: 2987448
[2025-10-12 06:35:29] 2025-10-12 10:35:27,153 [wrapper] Pilot exit status: 0
[2025-10-12 06:35:29] 2025-10-12 10:35:27,344 [wrapper] pandaids: 6839241501
[2025-10-12 06:35:29] 2025-10-12 10:35:28,325 [wrapper] cleanup supervisor_pilot 3671333 2987449
[2025-10-12 06:35:29] 2025-10-12 10:35:28,403 [wrapper] Test setup, not cleaning
[2025-10-12 06:35:29] 2025-10-12 10:35:28,473 [wrapper] apfmon messages muted
[2025-10-12 06:35:29] 2025-10-12 10:35:28,583 [wrapper] ==== wrapper stdout END ====
[2025-10-12 06:35:29] 2025-10-12 10:35:28,632 [wrapper] ==== wrapper stderr END ====
[2025-10-12 06:35:29]  *** Error codes and diagnostics ***
[2025-10-12 06:35:29]     "exeErrorCode": 0,
[2025-10-12 06:35:29]     "exeErrorDiag": "",
[2025-10-12 06:35:29]     "pilotErrorCode": 0,
[2025-10-12 06:35:29]     "pilotErrorDiag": "",
[2025-10-12 06:35:30]  *** Listing of results directory ***
[2025-10-12 06:35:30] total 414184
[2025-10-12 06:35:30] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 21:26 pilot3.tar.gz
[2025-10-12 06:35:30] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 21:38 queuedata.json
[2025-10-12 06:35:30] -rwx------. 1 boincer umatlas     36292 Oct 11 21:40 runpilot2-wrapper.sh
[2025-10-12 06:35:30] -rw-r--r--. 1 boincer umatlas       100 Oct 12 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 06:35:30] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 00:02 run_atlas
[2025-10-12 06:35:30] -rw-r--r--. 1 boincer umatlas       105 Oct 12 00:02 job.xml
[2025-10-12 06:35:30] -rw-r--r--. 2 boincer umatlas 219633648 Oct 12 00:02 EVNT.46676267._003157.pool.root.1
[2025-10-12 06:35:30] -rw-r--r--. 2 boincer umatlas    569681 Oct 12 00:02 input.tar.gz
[2025-10-12 06:35:30] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:02 start_atlas.sh
[2025-10-12 06:35:30] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 00:02 shared
[2025-10-12 06:35:30] -rw-r--r--. 1 boincer umatlas         0 Oct 12 00:02 boinc_lockfile
[2025-10-12 06:35:30] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 00:02 pandaJob.out
[2025-10-12 06:35:30] -rw-------. 1 boincer umatlas    975512 Oct 12 00:03 agis_schedconf.cvmfs.json
[2025-10-12 06:35:30] drwx------. 5 boincer umatlas      4096 Oct 12 00:03 pilot3
[2025-10-12 06:35:30] -rw-r--r--. 1 boincer umatlas      6900 Oct 12 06:29 init_data.xml
[2025-10-12 06:35:30] -rw-------. 1 boincer umatlas 193186173 Oct 12 06:31 HITS.46676269._068730.pool.root.1
[2025-10-12 06:35:30] -rw-r--r--. 1 boincer umatlas       531 Oct 12 06:31 boinc_task_state.xml
[2025-10-12 06:35:30] -rw-------. 1 boincer umatlas      1034 Oct 12 06:33 memory_monitor_summary.json
[2025-10-12 06:35:30] -rw-------. 1 boincer umatlas   1560580 Oct 12 06:33 agis_ddmendpoints.agis.ALL.json
[2025-10-12 06:35:30] -rw-------. 1 boincer umatlas    637580 Oct 12 06:33 log.46676269._068730.job.log.tgz.1
[2025-10-12 06:35:30] -rw-------. 1 boincer umatlas      7781 Oct 12 06:34 heartbeat.json
[2025-10-12 06:35:30] -rw-------. 1 boincer umatlas        95 Oct 12 06:35 pilot_heartbeat.json
[2025-10-12 06:35:30] -rw-r--r--. 1 boincer umatlas        28 Oct 12 06:35 wrapper_checkpoint.txt
[2025-10-12 06:35:30] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 06:35 boinc_mmap_file
[2025-10-12 06:35:30] -rw-------. 1 boincer umatlas      4824 Oct 12 06:35 pilotlog.txt
[2025-10-12 06:35:30] -rw-------. 1 boincer umatlas   3061587 Oct 12 06:35 log.46676269._068730.job.log.1
[2025-10-12 06:35:30] -rw-------. 1 boincer umatlas       357 Oct 12 06:35 output.list
[2025-10-12 06:35:30] -rw-r--r--. 1 boincer umatlas       620 Oct 12 06:35 runtime_log
[2025-10-12 06:35:30] -rw-------. 1 boincer umatlas   3717120 Oct 12 06:35 result.tar.gz
[2025-10-12 06:35:30] -rw-------. 1 boincer umatlas       656 Oct 12 06:35 XskMDm4F0R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmiFiNDmulXWwm.diag
[2025-10-12 06:35:30] -rw-r--r--. 1 boincer umatlas      8706 Oct 12 06:35 runtime_log.err
[2025-10-12 06:35:30] -rw-r--r--. 1 boincer umatlas     21058 Oct 12 06:35 stderr.txt
[2025-10-12 06:35:30] HITS file was successfully produced:
[2025-10-12 06:35:30] -rw-------. 1 boincer umatlas 193186173 Oct 12 06:31 shared/HITS.pool.root.1
[2025-10-12 06:35:30]  *** Contents of shared directory: ***
[2025-10-12 06:35:30] total 407364
[2025-10-12 06:35:30] -rw-r--r--. 2 boincer umatlas 219633648 Oct 12 00:02 ATLAS.root_0
[2025-10-12 06:35:30] -rw-r--r--. 2 boincer umatlas    569681 Oct 12 00:02 input.tar.gz
[2025-10-12 06:35:30] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:02 start_atlas.sh
[2025-10-12 06:35:30] -rw-------. 1 boincer umatlas 193186173 Oct 12 06:31 HITS.pool.root.1
[2025-10-12 06:35:30] -rw-------. 1 boincer umatlas   3717120 Oct 12 06:35 result.tar.gz
06:35:31 (2979443): run_atlas exited; CPU time 35233.653421
06:35:31 (2979443): called boinc_finish(0)

</stderr_txt>
]]>

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