Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:03 (542507): wrapper (7.7.26015): starting
00:02:03 (542507): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 00:02:04] Arguments: --nthreads 12
[2025-10-12 00:02:04] Threads: 12
[2025-10-12 00:02:04] Checking for CVMFS
[2025-10-12 00:02:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 00:02:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 00:02:05] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 00:02:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 00:02:07] 2.13.2.0 7655 56782 357092 151606 0 474 20091309 32935936 32195 16776704 10 89258106 99.530 112113084 8795 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 00:02:07] CVMFS is ok
[2025-10-12 00:02:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 00:02:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 00:02:07] Further information can be found at the LHC@home message board.
[2025-10-12 00:02:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 00:02:07] Checking for apptainer binary...
[2025-10-12 00:02:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 00:02:07] Running /usr/bin/apptainer --version
[2025-10-12 00:02:07] apptainer version 1.4.3-1.el9
[2025-10-12 00:02:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 00:02:09] c6-12-25-4.aglt2.org
[2025-10-12 00:02:09] apptainer works
[2025-10-12 00:02:09] Set ATHENA_PROC_NUMBER=12
[2025-10-12 00:02:09] Set ATHENA_CORE_NUMBER=12
[2025-10-12 00:02:09] Starting ATLAS job with PandaID=6839162246
[2025-10-12 00:02:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 10:28:38]  *** The last 200 lines of the pilot log: ***
[2025-10-12 10:28:38] 2025-10-12 14:24:30,479 | INFO     | fitting pss+swap vs Time
[2025-10-12 10:28:38] 2025-10-12 14:24:30,483 | INFO     | sum of square deviations: 69351916105.0049
[2025-10-12 10:28:38] 2025-10-12 14:24:30,562 | INFO     | sum of deviations: 332300503397.22784
[2025-10-12 10:28:38] 2025-10-12 14:24:30,563 | INFO     | mean x: 1760260451.306425
[2025-10-12 10:28:38] 2025-10-12 14:24:30,563 | INFO     | mean y: 2406250.0955518945
[2025-10-12 10:28:38] 2025-10-12 14:24:30,564 | INFO     | -- intersect: -8431901941.097218
[2025-10-12 10:28:38] 2025-10-12 14:24:30,564 | INFO     | intersect: -8431901941.097218
[2025-10-12 10:28:38] 2025-10-12 14:24:30,589 | INFO     | chi2: 5.543644944119239
[2025-10-12 10:28:38] 2025-10-12 14:24:30,616 | INFO     | sum of square deviations: 67652563162.62468
[2025-10-12 10:28:38] 2025-10-12 14:24:30,653 | INFO     | monitor loop #930: job 0:6839162246 is in state 'finished'
[2025-10-12 10:28:38] 2025-10-12 14:24:30,680 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 10:28:38] 2025-10-12 14:24:30,691 | INFO     | sum of deviations: 413335718260.03674
[2025-10-12 10:28:38] 2025-10-12 14:24:30,696 | INFO     | mean x: 1760260298.8205981
[2025-10-12 10:28:38] 2025-10-12 14:24:30,696 | INFO     | mean y: 2413488.787375415
[2025-10-12 10:28:38] 2025-10-12 14:24:30,697 | INFO     | -- intersect: -10752219017.724909
[2025-10-12 10:28:38] 2025-10-12 14:24:30,697 | INFO     | intersect: -10752219017.724909
[2025-10-12 10:28:38] 2025-10-12 14:24:30,699 | INFO     | chi2: 3.9962962789115415
[2025-10-12 10:28:38] 2025-10-12 14:24:30,704 | INFO     | current chi2=3.9962962789115415 (change=27.912117042220437 %)
[2025-10-12 10:28:38] 2025-10-12 14:24:30,706 | INFO     | sum of square deviations: 65980954174.606476
[2025-10-12 10:28:38] 2025-10-12 14:24:30,752 | INFO     | sum of deviations: 415094912826.5944
[2025-10-12 10:28:38] 2025-10-12 14:24:30,753 | INFO     | mean x: 1760260146.3232832
[2025-10-12 10:28:38] 2025-10-12 14:24:30,753 | INFO     | mean y: 2413649.043551089
[2025-10-12 10:28:38] 2025-10-12 14:24:30,754 | INFO     | -- intersect: -11071615836.140831
[2025-10-12 10:28:38] 2025-10-12 14:24:30,754 | INFO     | intersect: -11071615836.140831
[2025-10-12 10:28:38] 2025-10-12 14:24:30,767 | INFO     | chi2: 3.9878454833929413
[2025-10-12 10:28:38] 2025-10-12 14:24:30,768 | INFO     | current chi2=3.9878454833929413 (change=0.211465690449305 %)
[2025-10-12 10:28:38] 2025-10-12 14:24:30,768 | INFO     | right removable region: 596
[2025-10-12 10:28:38] 2025-10-12 14:24:30,775 | INFO     | sum of square deviations: 67651634837.38821
[2025-10-12 10:28:38] 2025-10-12 14:24:30,887 | INFO     | sum of deviations: 163769825249.392
[2025-10-12 10:28:38] 2025-10-12 14:24:30,887 | INFO     | mean x: 1760260603.833887
[2025-10-12 10:28:38] 2025-10-12 14:24:30,888 | INFO     | mean y: 2421353.823920266
[2025-10-12 10:28:38] 2025-10-12 14:24:30,888 | INFO     | -- intersect: -4258784930.047672
[2025-10-12 10:28:38] 2025-10-12 14:24:30,888 | INFO     | intersect: -4258784930.047672
[2025-10-12 10:28:38] 2025-10-12 14:24:30,896 | INFO     | chi2: 2.527106616281638
[2025-10-12 10:28:38] 2025-10-12 14:24:30,896 | INFO     | current chi2=2.527106616281638 (change=54.41434937202425 %)
[2025-10-12 10:28:38] 2025-10-12 14:24:30,924 | INFO     | sum of square deviations: 65979464155.00541
[2025-10-12 10:28:38] 2025-10-12 14:24:31,062 | INFO     | sum of deviations: 96041742906.48247
[2025-10-12 10:28:38] 2025-10-12 14:24:31,085 | INFO     | mean x: 1760260756.3567839
[2025-10-12 10:28:38] 2025-10-12 14:24:31,085 | INFO     | mean y: 2427531.5845896145
[2025-10-12 10:28:38] 2025-10-12 14:24:31,086 | INFO     | -- intersect: -2559862313.8318543
[2025-10-12 10:28:38] 2025-10-12 14:24:31,086 | INFO     | intersect: -2559862313.8318543
[2025-10-12 10:28:38] 2025-10-12 14:24:31,088 | INFO     | chi2: 2.0918055043725166
[2025-10-12 10:28:38] 2025-10-12 14:24:31,131 | INFO     | current chi2=2.0918055043725166 (change=17.225276887985817 %)
[2025-10-12 10:28:38] 2025-10-12 14:24:31,131 | INFO     | left removable region: 20
[2025-10-12 10:28:38] 2025-10-12 14:24:31,134 | INFO     | sum of square deviations: 59258628638.48424
[2025-10-12 10:28:38] 2025-10-12 14:24:31,201 | INFO     | sum of deviations: 92762406273.8229
[2025-10-12 10:28:38] 2025-10-12 14:24:31,202 | INFO     | mean x: 1760260725.9114583
[2025-10-12 10:28:38] 2025-10-12 14:24:31,203 | INFO     | mean y: 2444046.6631944445
[2025-10-12 10:28:38] 2025-10-12 14:24:31,203 | INFO     | -- intersect: -2753036874.1154976
[2025-10-12 10:28:38] 2025-10-12 14:24:31,203 | INFO     | intersect: -2753036874.1154976
[2025-10-12 10:28:38] 2025-10-12 14:24:31,205 | INFO     | chi2: 0.12417798529369507
[2025-10-12 10:28:38] 2025-10-12 14:24:31,206 | INFO     | -- intersect: -2753036874.1154976
[2025-10-12 10:28:38] 2025-10-12 14:24:31,206 | INFO     | current memory leak: 1.57 B/s (using 576 data points, chi2=0.12)
[2025-10-12 10:28:38] 2025-10-12 14:24:31,209 | INFO     | could have reported an average CPU frequency of 999 MHz (23 samples)
[2025-10-12 10:28:38] 2025-10-12 14:24:31,209 | INFO     | ..............................
[2025-10-12 10:28:38] 2025-10-12 14:24:31,210 | INFO     | . Timing measurements:
[2025-10-12 10:28:38] 2025-10-12 14:24:31,210 | INFO     | . get job = 2 s
[2025-10-12 10:28:38] 2025-10-12 14:24:31,210 | INFO     | . initial setup = 17 s
[2025-10-12 10:28:38] 2025-10-12 14:24:31,210 | INFO     | . payload setup = 38 s
[2025-10-12 10:28:38] 2025-10-12 14:24:31,211 | INFO     | . stage-in = 1 s
[2025-10-12 10:28:38] 2025-10-12 14:24:31,211 | INFO     | . payload execution = 37060 s
[2025-10-12 10:28:38] 2025-10-12 14:24:31,211 | INFO     | . stage-out = 17 s
[2025-10-12 10:28:38] 2025-10-12 14:24:31,211 | INFO     | . log creation = 4 s
[2025-10-12 10:28:38] 2025-10-12 14:24:31,211 | INFO     | ..............................
[2025-10-12 10:28:38] 2025-10-12 14:24:31,846 | INFO     | 
[2025-10-12 10:28:38] 2025-10-12 14:24:31,848 | INFO     | job summary report
[2025-10-12 10:28:38] 2025-10-12 14:24:31,848 | INFO     | --------------------------------------------------
[2025-10-12 10:28:38] 2025-10-12 14:24:31,849 | INFO     | PanDA job id: 6839162246
[2025-10-12 10:28:38] 2025-10-12 14:24:31,849 | INFO     | task id: 46676269
[2025-10-12 10:28:38] 2025-10-12 14:24:31,849 | INFO     | errors: (none)
[2025-10-12 10:28:38] 2025-10-12 14:24:31,849 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 10:28:38] 2025-10-12 14:24:31,850 | INFO     | pilot state: finished 
[2025-10-12 10:28:38] 2025-10-12 14:24:31,850 | INFO     | transexitcode: 0
[2025-10-12 10:28:38] 2025-10-12 14:24:31,850 | INFO     | exeerrorcode: 0
[2025-10-12 10:28:38] 2025-10-12 14:24:31,850 | INFO     | exeerrordiag: 
[2025-10-12 10:28:38] 2025-10-12 14:24:31,850 | INFO     | exitcode: 0
[2025-10-12 10:28:38] 2025-10-12 14:24:31,851 | INFO     | exitmsg: OK
[2025-10-12 10:28:38] 2025-10-12 14:24:31,851 | INFO     | cpuconsumptiontime: 119790 s
[2025-10-12 10:28:38] 2025-10-12 14:24:31,851 | INFO     | nevents: 400
[2025-10-12 10:28:38] 2025-10-12 14:24:31,851 | INFO     | neventsw: 0
[2025-10-12 10:28:38] 2025-10-12 14:24:31,872 | INFO     | pid: 593365
[2025-10-12 10:28:38] 2025-10-12 14:24:31,872 | INFO     | pgrp: 593365
[2025-10-12 10:28:38] 2025-10-12 14:24:31,872 | INFO     | corecount: 12
[2025-10-12 10:28:38] 2025-10-12 14:24:31,873 | INFO     | event service: False
[2025-10-12 10:28:38] 2025-10-12 14:24:31,873 | INFO     | sizes: {0: 2348028, 1: 2348629, 3: 2348713, 6: 2348769, 7: 2348940, 11: 2348968, 23: 2349124, 36: 2349152, 46: 2349442, 49: 2349470, 37109: 2386542, 37110: 2386821
[2025-10-12 10:28:38] 2025-10-12 14:24:31,873 | INFO     | --------------------------------------------------
[2025-10-12 10:28:38] 2025-10-12 14:24:31,873 | INFO     | 
[2025-10-12 10:28:38] 2025-10-12 14:24:31,874 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2025-10-12 10:28:38] 2025-10-12 14:24:32,034 | INFO     | time since job start (37270s) is within the limit (172800.0s)
[2025-10-12 10:28:38] 2025-10-12 14:24:32,192 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 10:28:38] 2025-10-12 14:24:32,192 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 10:28:38] 2025-10-12 14:24:32,193 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 10:28:38] 2025-10-12 14:24:32,193 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 10:28:38] 2025-10-12 14:24:32,193 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 10:28:38] 2025-10-12 14:24:32,193 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 10:28:38] 2025-10-12 14:24:32,194 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 10:28:38] 2025-10-12 14:24:32,194 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 10:28:38] 2025-10-12 14:24:32,194 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 10:28:38] 2025-10-12 14:24:32,194 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 10:28:38] 2025-10-12 14:24:32,194 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 10:28:38] 2025-10-12 14:24:32,195 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 10:28:38] 2025-10-12 14:24:32,195 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 10:28:38] 2025-10-12 14:24:32,195 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 10:28:38] 2025-10-12 14:24:32,195 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 10:28:38] 2025-10-12 14:24:32,214 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 10:28:38] 2025-10-12 14:24:32,214 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 10:28:38] 2025-10-12 14:24:32,214 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 10:28:38] 2025-10-12 14:24:32,214 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 10:28:38] 2025-10-12 14:24:32,215 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 10:28:38] 2025-10-12 14:24:32,215 | INFO     | job 6839162246 has completed (purged errors)
[2025-10-12 10:28:38] 2025-10-12 14:24:32,215 | INFO     | overall cleanup function is called
[2025-10-12 10:28:38] 2025-10-12 14:24:33,266 | INFO     | --- collectZombieJob: --- 10, [593365]
[2025-10-12 10:28:38] 2025-10-12 14:24:33,267 | INFO     | zombie collector waiting for pid 593365
[2025-10-12 10:28:38] 2025-10-12 14:24:33,267 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 10:28:38] 2025-10-12 14:24:33,268 | INFO     | collected zombie processes
[2025-10-12 10:28:38] 2025-10-12 14:24:33,268 | INFO     | will attempt to kill all subprocesses of pid=593365
[2025-10-12 10:28:38] 2025-10-12 14:24:39,063 | INFO     | process IDs to be killed: [593365] (in reverse order)
[2025-10-12 10:28:38] 2025-10-12 14:24:39,677 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 10:28:38] 2025-10-12 14:24:39,678 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 10:28:38] 2025-10-12 14:24:39,910 | INFO     | did not find any defunct processes belonging to 593365
[2025-10-12 10:28:38] 2025-10-12 14:24:40,182 | INFO     | did not find any defunct processes belonging to 593365
[2025-10-12 10:28:38] 2025-10-12 14:24:40,184 | INFO     | ready for new job
[2025-10-12 10:28:38] 2025-10-12 14:24:40,184 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 10:28:38] 2025-10-12 14:24:40,217 | INFO     | ***************************************
[2025-10-12 10:28:38] 2025-10-12 14:24:40,218 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 10:28:38] 2025-10-12 14:24:40,218 | INFO     | ***************************************
[2025-10-12 10:28:38] 2025-10-12 14:24:40,219 | INFO     | 
[2025-10-12 10:28:38] 2025-10-12 14:24:40,333 | INFO     | architecture information:
[2025-10-12 10:28:38] 2025-10-12 14:24:40,340 | INFO     | executing command: cat /etc/os-release
[2025-10-12 10:28:38] 2025-10-12 14:24:40,570 | INFO     | cat /etc/os-release:
[2025-10-12 10:28:38] NAME="CentOS Linux"
[2025-10-12 10:28:38] VERSION="7 (Core)"
[2025-10-12 10:28:38] ID="centos"
[2025-10-12 10:28:38] ID_LIKE="rhel fedora"
[2025-10-12 10:28:38] VERSION_ID="7"
[2025-10-12 10:28:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 10:28:38] ANSI_COLOR="0;31"
[2025-10-12 10:28:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 10:28:38] HOME_URL="https://www.centos.org/"
[2025-10-12 10:28:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 10:28:38] 
[2025-10-12 10:28:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 10:28:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 10:28:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 10:28:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 10:28:38] 
[2025-10-12 10:28:38] 2025-10-12 14:24:40,571 | INFO     | ***************************************
[2025-10-12 10:28:38] 2025-10-12 14:24:41,075 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2025-10-12 10:28:38] 2025-10-12 14:24:41,281 | INFO     | sufficient remaining disk space (92893347840 B)
[2025-10-12 10:28:38] 2025-10-12 14:24:41,282 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 10:28:38] 2025-10-12 14:24:41,282 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 10:28:38] 2025-10-12 14:24:41,282 | INFO     | update_server=False
[2025-10-12 10:28:38] 2025-10-12 14:24:41,283 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 10:28:38] 2025-10-12 14:24:41,292 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 10:28:38] 2025-10-12 14:24:41,328 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 10:28:38] 2025-10-12 14:24:41,818 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 10:28:38] 2025-10-12 14:24:41,818 | INFO     | aborting loop
[2025-10-12 10:28:38] 2025-10-12 14:24:42,047 | INFO     | all job control threads have been joined
[2025-10-12 10:28:38] 2025-10-12 14:24:42,153 | INFO     | all data control threads have been joined
[2025-10-12 10:28:38] 2025-10-12 14:24:42,289 | INFO     | [job] retrieve thread has finished
[2025-10-12 10:28:38] 2025-10-12 14:24:42,295 | INFO     | [job] validate thread has finished
[2025-10-12 10:28:38] 2025-10-12 14:24:42,336 | INFO     | [job] queue monitor thread has finished
[2025-10-12 10:28:38] 2025-10-12 14:24:42,342 | INFO     | [data] copytool_in thread has finished
[2025-10-12 10:28:38] 2025-10-12 14:24:42,348 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 10:28:38] 2025-10-12 14:24:42,476 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 10:28:38] 2025-10-12 14:24:42,489 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 10:28:38] 2025-10-12 14:24:42,557 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 10:28:38] 2025-10-12 14:24:42,573 | INFO     | [payload] validate_post thread has finished
[2025-10-12 10:28:38] 2025-10-12 14:24:42,722 | INFO     | all payload control threads have been joined
[2025-10-12 10:28:38] 2025-10-12 14:24:42,825 | INFO     | [job] job monitor thread has finished
[2025-10-12 10:28:38] 2025-10-12 14:24:43,063 | INFO     | [job] control thread has finished
[2025-10-12 10:28:38] 2025-10-12 14:24:43,162 | INFO     | [data] control thread has finished
[2025-10-12 10:28:38] 2025-10-12 14:24:43,250 | INFO     | [payload] failed_post thread has finished
[2025-10-12 10:28:38] 2025-10-12 14:24:43,360 | INFO     | [data] copytool_out thread has finished
[2025-10-12 10:28:38] 2025-10-12 14:24:43,729 | INFO     | [payload] control thread has finished
[2025-10-12 10:28:38] 2025-10-12 14:24:43,757 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 10:28:38] 2025-10-12 14:24:47,767 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 10:28:38] 2025-10-12 14:25:12,442 | INFO     | PID=560475 has CPU usage=7.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 10:28:38] 2025-10-12 14:25:12,443 | INFO     | .. there are 38 such processes running
[2025-10-12 10:28:38] 2025-10-12 14:25:12,446 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 10:28:38] 2025-10-12 14:25:12,446 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 10:28:38] 2025-10-12 14:25:12,447 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 10:28:38] 2025-10-12 14:25:40,951 | INFO     | [monitor] cgroup control has ended
[2025-10-12 10:28:38] 2025-10-12 14:25:42,297 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140345754412864)>', '<ExcThread(monitor, started 140345253795584)>']
[2025-10-12 10:28:38] 2025-10-12 14:25:42,727 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 10:28:38] 2025-10-12 14:25:42,728 | INFO     | [monitor] control thread has ended
[2025-10-12 10:28:38] 2025-10-12 14:25:47,323 | INFO     | all workflow threads have been joined
[2025-10-12 10:28:38] 2025-10-12 14:25:47,390 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 10:28:38] 2025-10-12 14:25:47,391 | INFO     | traces error code: 0
[2025-10-12 10:28:38] 2025-10-12 14:25:47,392 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 10:28:38] 2025-10-12 14:25:54,872 [wrapper] ==== pilot stdout END ====
[2025-10-12 10:28:38] 2025-10-12 14:25:54,935 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 10:28:38] 2025-10-12 14:25:54,977 [wrapper] pilotpid: 560475
[2025-10-12 10:28:38] 2025-10-12 14:25:55,018 [wrapper] Pilot exit status: 0
[2025-10-12 10:28:38] 2025-10-12 14:25:55,222 [wrapper] pandaids: 6839162246
[2025-10-12 10:28:38] 2025-10-12 14:25:55,600 [wrapper] cleanup supervisor_pilot 2098657 560477
[2025-10-12 10:28:38] 2025-10-12 14:25:55,641 [wrapper] Test setup, not cleaning
[2025-10-12 10:28:38] 2025-10-12 14:25:55,682 [wrapper] apfmon messages muted
[2025-10-12 10:28:38] 2025-10-12 14:25:55,727 [wrapper] ==== wrapper stdout END ====
[2025-10-12 10:28:38] 2025-10-12 14:25:55,784 [wrapper] ==== wrapper stderr END ====
[2025-10-12 10:28:38]  *** Error codes and diagnostics ***
[2025-10-12 10:28:38]     "exeErrorCode": 0,
[2025-10-12 10:28:38]     "exeErrorDiag": "",
[2025-10-12 10:28:38]     "pilotErrorCode": 0,
[2025-10-12 10:28:38]     "pilotErrorDiag": "",
[2025-10-12 10:28:38]  *** Listing of results directory ***
[2025-10-12 10:28:38] total 413736
[2025-10-12 10:28:38] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 19:09 pilot3.tar.gz
[2025-10-12 10:28:38] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 19:15 queuedata.json
[2025-10-12 10:28:38] -rwx------. 1 boincer umatlas     36292 Oct 11 19:17 runpilot2-wrapper.sh
[2025-10-12 10:28:38] -rw-r--r--. 1 boincer umatlas       100 Oct 12 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 10:28:38] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 00:01 run_atlas
[2025-10-12 10:28:38] -rw-r--r--. 1 boincer umatlas       105 Oct 12 00:01 job.xml
[2025-10-12 10:28:38] -rw-r--r--. 2 boincer umatlas 220154116 Oct 12 00:02 EVNT.46676267._002704.pool.root.1
[2025-10-12 10:28:38] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:02 start_atlas.sh
[2025-10-12 10:28:38] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 00:02 shared
[2025-10-12 10:28:38] -rw-r--r--. 2 boincer umatlas    569687 Oct 12 00:02 input.tar.gz
[2025-10-12 10:28:38] -rw-r--r--. 1 boincer umatlas         0 Oct 12 00:02 boinc_lockfile
[2025-10-12 10:28:38] -rw-r--r--. 1 boincer umatlas      2549 Oct 12 00:02 pandaJob.out
[2025-10-12 10:28:38] -rw-------. 1 boincer umatlas    975512 Oct 12 00:03 agis_schedconf.cvmfs.json
[2025-10-12 10:28:38] drwx------. 5 boincer umatlas      4096 Oct 12 00:03 pilot3
[2025-10-12 10:28:38] -rw-------. 1 boincer umatlas 193090447 Oct 12 10:20 HITS.46676269._066853.pool.root.1
[2025-10-12 10:28:38] -rw-r--r--. 1 boincer umatlas      6859 Oct 12 10:20 init_data.xml
[2025-10-12 10:28:38] -rw-r--r--. 1 boincer umatlas       532 Oct 12 10:21 boinc_task_state.xml
[2025-10-12 10:28:38] -rw-------. 1 boincer umatlas      1040 Oct 12 10:23 memory_monitor_summary.json
[2025-10-12 10:28:38] -rw-------. 1 boincer umatlas   1560580 Oct 12 10:23 agis_ddmendpoints.agis.ALL.json
[2025-10-12 10:28:38] -rw-------. 1 boincer umatlas    657018 Oct 12 10:23 log.46676269._066853.job.log.tgz.1
[2025-10-12 10:28:38] -rw-------. 1 boincer umatlas      7839 Oct 12 10:24 heartbeat.json
[2025-10-12 10:28:38] -rw-------. 1 boincer umatlas        95 Oct 12 10:25 pilot_heartbeat.json
[2025-10-12 10:28:38] -rw-------. 1 boincer umatlas      4823 Oct 12 10:25 pilotlog.txt
[2025-10-12 10:28:38] -rw-------. 1 boincer umatlas   2600945 Oct 12 10:25 log.46676269._066853.job.log.1
[2025-10-12 10:28:38] -rw-------. 1 boincer umatlas       357 Oct 12 10:25 output.list
[2025-10-12 10:28:38] -rw-r--r--. 1 boincer umatlas       620 Oct 12 10:25 runtime_log
[2025-10-12 10:28:38] -rw-------. 1 boincer umatlas   3276800 Oct 12 10:25 result.tar.gz
[2025-10-12 10:28:38] -rw-r--r--. 1 boincer umatlas      8716 Oct 12 10:25 runtime_log.err
[2025-10-12 10:28:38] -rw-------. 1 boincer umatlas       661 Oct 12 10:25 mWjMDmC1xR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmnwhNDmhTrr8n.diag
[2025-10-12 10:28:38] -rw-r--r--. 1 boincer umatlas        29 Oct 12 10:28 wrapper_checkpoint.txt
[2025-10-12 10:28:38] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 10:28 boinc_mmap_file
[2025-10-12 10:28:38] -rw-r--r--. 1 boincer umatlas     21103 Oct 12 10:28 stderr.txt
[2025-10-12 10:28:39] HITS file was successfully produced:
[2025-10-12 10:28:39] -rw-------. 1 boincer umatlas 193090447 Oct 12 10:20 shared/HITS.pool.root.1
[2025-10-12 10:28:39]  *** Contents of shared directory: ***
[2025-10-12 10:28:39] total 407348
[2025-10-12 10:28:39] -rw-r--r--. 2 boincer umatlas 220154116 Oct 12 00:02 ATLAS.root_0
[2025-10-12 10:28:39] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:02 start_atlas.sh
[2025-10-12 10:28:39] -rw-r--r--. 2 boincer umatlas    569687 Oct 12 00:02 input.tar.gz
[2025-10-12 10:28:39] -rw-------. 1 boincer umatlas 193090447 Oct 12 10:20 HITS.pool.root.1
[2025-10-12 10:28:39] -rw-------. 1 boincer umatlas   3276800 Oct 12 10:25 result.tar.gz
10:28:40 (542507): run_atlas exited; CPU time 122233.242085
10:28:40 (542507): called boinc_finish(0)

</stderr_txt>
]]>

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