Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:11:09 (3620651): wrapper (7.7.26015): starting
00:11:09 (3620651): wrapper: running run_atlas (--nthreads 9)
[2025-10-12 00:11:09] Arguments: --nthreads 9
[2025-10-12 00:11:09] Threads: 9
[2025-10-12 00:11:09] Checking for CVMFS
[2025-10-12 00:11:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 00:11:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 00:11:10] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 00:11:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 00:11:12] 2.13.2.0 194911 128765 248028 151607 1 280 23255553 32935936 31241 16776704 0 102726202 99.673 88763562 30151 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 00:11:12] CVMFS is ok
[2025-10-12 00:11:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 00:11:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 00:11:12] Further information can be found at the LHC@home message board.
[2025-10-12 00:11:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 00:11:12] Checking for apptainer binary...
[2025-10-12 00:11:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 00:11:12] Running /usr/bin/apptainer --version
[2025-10-12 00:11:12] apptainer version 1.4.3-1.el9
[2025-10-12 00:11:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 00:11:13] c-4-37.aglt2.org
[2025-10-12 00:11:13] apptainer works
[2025-10-12 00:11:13] Set ATHENA_PROC_NUMBER=9
[2025-10-12 00:11:13] Set ATHENA_CORE_NUMBER=9
[2025-10-12 00:11:14] Starting ATLAS job with PandaID=6839162102
[2025-10-12 00:11:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 15:49:00]  *** The last 200 lines of the pilot log: ***
[2025-10-12 15:49:00] 2025-10-12 19:48:24,051 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 15:49:00] 2025-10-12 19:48:24,487 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 15:49:00] 2025-10-12 19:48:24,521 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.16305
[2025-10-12 15:49:00] 2025-10-12 19:48:24,556 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6839162102/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 15:49:00] 2025-10-12 19:48:24,557 | INFO     | extracted standard info from prmon json
[2025-10-12 15:49:00] 2025-10-12 19:48:24,558 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 15:49:00] 2025-10-12 19:48:24,558 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 15:49:00] 2025-10-12 19:48:24,558 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 15:49:00] 2025-10-12 19:48:24,558 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 15:49:00] 2025-10-12 19:48:24,632 | INFO     | fitting pss+swap vs Time
[2025-10-12 15:49:00] 2025-10-12 19:48:24,633 | INFO     | sum of square deviations: 239076438958.129
[2025-10-12 15:49:00] 2025-10-12 19:48:24,765 | INFO     | sum of deviations: 113778361581.593
[2025-10-12 15:49:00] 2025-10-12 19:48:24,766 | INFO     | mean x: 1760270500.2988005
[2025-10-12 15:49:00] 2025-10-12 19:48:24,766 | INFO     | mean y: 2329198.9029443837
[2025-10-12 15:49:00] 2025-10-12 19:48:24,766 | INFO     | -- intersect: -835397405.7646322
[2025-10-12 15:49:00] 2025-10-12 19:48:24,766 | INFO     | intersect: -835397405.7646322
[2025-10-12 15:49:00] 2025-10-12 19:48:24,776 | INFO     | chi2: 4.987180795240519
[2025-10-12 15:49:00] 2025-10-12 19:48:24,778 | INFO     | sum of square deviations: 235186850323.25867
[2025-10-12 15:49:00] 2025-10-12 19:48:24,897 | INFO     | sum of deviations: 174980244541.17978
[2025-10-12 15:49:00] 2025-10-12 19:48:24,897 | INFO     | mean x: 1760270347.8048246
[2025-10-12 15:49:00] 2025-10-12 19:48:24,897 | INFO     | mean y: 2331589.6864035088
[2025-10-12 15:49:00] 2025-10-12 19:48:24,898 | INFO     | -- intersect: -1307318739.3779976
[2025-10-12 15:49:00] 2025-10-12 19:48:24,898 | INFO     | intersect: -1307318739.3779976
[2025-10-12 15:49:00] 2025-10-12 19:48:24,899 | INFO     | chi2: 4.309608798541752
[2025-10-12 15:49:00] 2025-10-12 19:48:24,899 | INFO     | current chi2=4.309608798541752 (change=13.586272977017465 %)
[2025-10-12 15:49:00] 2025-10-12 19:48:24,899 | INFO     | right removable region: 911
[2025-10-12 15:49:00] 2025-10-12 19:48:24,901 | INFO     | sum of square deviations: 235186235199.25873
[2025-10-12 15:49:00] 2025-10-12 19:48:24,990 | INFO     | sum of deviations: -130903840877.93643
[2025-10-12 15:49:00] 2025-10-12 19:48:24,990 | INFO     | mean x: 1760270652.8048246
[2025-10-12 15:49:00] 2025-10-12 19:48:24,990 | INFO     | mean y: 2338784.30372807
[2025-10-12 15:49:00] 2025-10-12 19:48:24,991 | INFO     | -- intersect: 982099310.0064259
[2025-10-12 15:49:00] 2025-10-12 19:48:24,991 | INFO     | intersect: 982099310.0064259
[2025-10-12 15:49:00] 2025-10-12 19:48:24,992 | INFO     | chi2: 1.9444952829150188
[2025-10-12 15:49:00] 2025-10-12 19:48:24,993 | INFO     | current chi2=1.9444952829150188 (change=61.01013051761159 %)
[2025-10-12 15:49:00] 2025-10-12 19:48:25,007 | INFO     | sum of square deviations: 231338506717.94223
[2025-10-12 15:49:00] 2025-10-12 19:48:25,103 | INFO     | sum of deviations: -211733800823.20392
[2025-10-12 15:49:00] 2025-10-12 19:48:25,103 | INFO     | mean x: 1760270805.3098125
[2025-10-12 15:49:00] 2025-10-12 19:48:25,103 | INFO     | mean y: 2341985.506063947
[2025-10-12 15:49:00] 2025-10-12 19:48:25,104 | INFO     | -- intersect: 1613439218.6216521
[2025-10-12 15:49:00] 2025-10-12 19:48:25,104 | INFO     | intersect: 1613439218.6216521
[2025-10-12 15:49:00] 2025-10-12 19:48:25,105 | INFO     | chi2: 1.563604785594742
[2025-10-12 15:49:00] 2025-10-12 19:48:25,105 | INFO     | current chi2=1.563604785594742 (change=19.588142006149734 %)
[2025-10-12 15:49:00] 2025-10-12 19:48:25,106 | INFO     | left removable region: 20
[2025-10-12 15:49:00] 2025-10-12 19:48:25,111 | INFO     | sum of square deviations: 219309300721.11346
[2025-10-12 15:49:00] 2025-10-12 19:48:25,183 | INFO     | sum of deviations: -238140919759.29657
[2025-10-12 15:49:00] 2025-10-12 19:48:25,199 | INFO     | mean x: 1760270927.3176208
[2025-10-12 15:49:00] 2025-10-12 19:48:25,199 | INFO     | mean y: 2348048.407407407
[2025-10-12 15:49:00] 2025-10-12 19:48:25,199 | INFO     | -- intersect: 1913769662.8971546
[2025-10-12 15:49:00] 2025-10-12 19:48:25,199 | INFO     | intersect: 1913769662.8971546
[2025-10-12 15:49:00] 2025-10-12 19:48:25,201 | INFO     | chi2: 0.6512362891370598
[2025-10-12 15:49:00] 2025-10-12 19:48:25,201 | INFO     | -- intersect: 1913769662.8971546
[2025-10-12 15:49:00] 2025-10-12 19:48:25,201 | INFO     | current memory leak: -1.09 B/s (using 891 data points, chi2=0.65)
[2025-10-12 15:49:00] 2025-10-12 19:48:25,202 | INFO     | could have reported an average CPU frequency of 2601 MHz (34 samples)
[2025-10-12 15:49:00] 2025-10-12 19:48:25,233 | INFO     | ..............................
[2025-10-12 15:49:00] 2025-10-12 19:48:25,233 | INFO     | . Timing measurements:
[2025-10-12 15:49:00] 2025-10-12 19:48:25,233 | INFO     | . get job = 1 s
[2025-10-12 15:49:00] 2025-10-12 19:48:25,233 | INFO     | . initial setup = 6 s
[2025-10-12 15:49:00] 2025-10-12 19:48:25,234 | INFO     | . payload setup = 57 s
[2025-10-12 15:49:00] 2025-10-12 19:48:25,234 | INFO     | . stage-in = 0 s
[2025-10-12 15:49:00] 2025-10-12 19:48:25,234 | INFO     | . payload execution = 55963 s
[2025-10-12 15:49:00] 2025-10-12 19:48:25,234 | INFO     | . stage-out = 5 s
[2025-10-12 15:49:00] 2025-10-12 19:48:25,234 | INFO     | . log creation = 0 s
[2025-10-12 15:49:00] 2025-10-12 19:48:25,234 | INFO     | ..............................
[2025-10-12 15:49:00] 2025-10-12 19:48:25,364 | INFO     | time since job start (56134s) is within the limit (172800.0s)
[2025-10-12 15:49:00] 2025-10-12 19:48:25,839 | INFO     | 
[2025-10-12 15:49:00] 2025-10-12 19:48:25,839 | INFO     | job summary report
[2025-10-12 15:49:00] 2025-10-12 19:48:25,839 | INFO     | --------------------------------------------------
[2025-10-12 15:49:00] 2025-10-12 19:48:25,839 | INFO     | PanDA job id: 6839162102
[2025-10-12 15:49:00] 2025-10-12 19:48:25,839 | INFO     | task id: 46676269
[2025-10-12 15:49:00] 2025-10-12 19:48:25,840 | INFO     | errors: (none)
[2025-10-12 15:49:00] 2025-10-12 19:48:25,840 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 15:49:00] 2025-10-12 19:48:25,840 | INFO     | pilot state: finished 
[2025-10-12 15:49:00] 2025-10-12 19:48:25,840 | INFO     | transexitcode: 0
[2025-10-12 15:49:00] 2025-10-12 19:48:25,840 | INFO     | exeerrorcode: 0
[2025-10-12 15:49:00] 2025-10-12 19:48:25,840 | INFO     | exeerrordiag: 
[2025-10-12 15:49:00] 2025-10-12 19:48:25,840 | INFO     | exitcode: 0
[2025-10-12 15:49:00] 2025-10-12 19:48:25,840 | INFO     | exitmsg: OK
[2025-10-12 15:49:00] 2025-10-12 19:48:25,840 | INFO     | cpuconsumptiontime: 48002 s
[2025-10-12 15:49:00] 2025-10-12 19:48:25,840 | INFO     | nevents: 400
[2025-10-12 15:49:00] 2025-10-12 19:48:25,841 | INFO     | neventsw: 0
[2025-10-12 15:49:00] 2025-10-12 19:48:25,841 | INFO     | pid: 3653932
[2025-10-12 15:49:00] 2025-10-12 19:48:25,841 | INFO     | pgrp: 3653932
[2025-10-12 15:49:00] 2025-10-12 19:48:25,841 | INFO     | corecount: 9
[2025-10-12 15:49:00] 2025-10-12 19:48:25,841 | INFO     | event service: False
[2025-10-12 15:49:00] 2025-10-12 19:48:25,841 | INFO     | sizes: {0: 2348577, 1: 2348661, 2: 2348661, 3: 2348860, 4: 2348860, 15: 2348888, 26: 2349044, 37: 2349072, 44: 2349362, 48: 2349390, 56024: 2398475, 56030: 2407473
[2025-10-12 15:49:00] 2025-10-12 19:48:25,841 | INFO     | --------------------------------------------------
[2025-10-12 15:49:00] 2025-10-12 19:48:25,841 | INFO     | 
[2025-10-12 15:49:00] 2025-10-12 19:48:25,841 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 15:49:00] 2025-10-12 19:48:26,077 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 15:49:00] 2025-10-12 19:48:26,078 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 15:49:00] 2025-10-12 19:48:26,078 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 15:49:00] 2025-10-12 19:48:26,078 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 15:49:00] 2025-10-12 19:48:26,078 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 15:49:00] 2025-10-12 19:48:26,078 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 15:49:00] 2025-10-12 19:48:26,078 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 15:49:00] 2025-10-12 19:48:26,078 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 15:49:00] 2025-10-12 19:48:26,078 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 15:49:00] 2025-10-12 19:48:26,078 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 15:49:00] 2025-10-12 19:48:26,078 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 15:49:00] 2025-10-12 19:48:26,079 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 15:49:00] 2025-10-12 19:48:26,079 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 15:49:00] 2025-10-12 19:48:26,079 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 15:49:00] 2025-10-12 19:48:26,079 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 15:49:00] 2025-10-12 19:48:26,079 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 15:49:00] 2025-10-12 19:48:26,079 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 15:49:00] 2025-10-12 19:48:26,079 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 15:49:00] 2025-10-12 19:48:26,079 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 15:49:00] 2025-10-12 19:48:26,079 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 15:49:00] 2025-10-12 19:48:26,080 | INFO     | job 6839162102 has completed (purged errors)
[2025-10-12 15:49:00] 2025-10-12 19:48:26,080 | INFO     | overall cleanup function is called
[2025-10-12 15:49:00] 2025-10-12 19:48:27,110 | INFO     | --- collectZombieJob: --- 10, [3653932]
[2025-10-12 15:49:00] 2025-10-12 19:48:27,110 | INFO     | zombie collector waiting for pid 3653932
[2025-10-12 15:49:00] 2025-10-12 19:48:27,110 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 15:49:00] 2025-10-12 19:48:27,110 | INFO     | collected zombie processes
[2025-10-12 15:49:00] 2025-10-12 19:48:27,111 | INFO     | will attempt to kill all subprocesses of pid=3653932
[2025-10-12 15:49:00] 2025-10-12 19:48:28,665 | INFO     | process IDs to be killed: [3653932] (in reverse order)
[2025-10-12 15:49:00] 2025-10-12 19:48:28,965 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 15:49:00] 2025-10-12 19:48:28,966 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 15:49:00] 2025-10-12 19:48:28,985 | INFO     | did not find any defunct processes belonging to 3653932
[2025-10-12 15:49:00] 2025-10-12 19:48:29,017 | INFO     | did not find any defunct processes belonging to 3653932
[2025-10-12 15:49:00] 2025-10-12 19:48:29,017 | INFO     | ready for new job
[2025-10-12 15:49:00] 2025-10-12 19:48:29,018 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 15:49:00] 2025-10-12 19:48:29,026 | INFO     | ***************************************
[2025-10-12 15:49:00] 2025-10-12 19:48:29,026 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 15:49:00] 2025-10-12 19:48:29,026 | INFO     | ***************************************
[2025-10-12 15:49:00] 2025-10-12 19:48:29,026 | INFO     | 
[2025-10-12 15:49:00] 2025-10-12 19:48:29,041 | INFO     | architecture information:
[2025-10-12 15:49:00] 2025-10-12 19:48:29,045 | INFO     | executing command: cat /etc/os-release
[2025-10-12 15:49:00] 2025-10-12 19:48:29,074 | INFO     | cat /etc/os-release:
[2025-10-12 15:49:00] NAME="CentOS Linux"
[2025-10-12 15:49:00] VERSION="7 (Core)"
[2025-10-12 15:49:00] ID="centos"
[2025-10-12 15:49:00] ID_LIKE="rhel fedora"
[2025-10-12 15:49:00] VERSION_ID="7"
[2025-10-12 15:49:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 15:49:00] ANSI_COLOR="0;31"
[2025-10-12 15:49:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 15:49:00] HOME_URL="https://www.centos.org/"
[2025-10-12 15:49:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 15:49:00] 
[2025-10-12 15:49:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 15:49:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 15:49:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 15:49:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 15:49:00] 
[2025-10-12 15:49:00] 2025-10-12 19:48:29,075 | INFO     | ***************************************
[2025-10-12 15:49:00] 2025-10-12 19:48:29,578 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 15:49:00] 2025-10-12 19:48:29,761 | INFO     | sufficient remaining disk space (75426168832 B)
[2025-10-12 15:49:00] 2025-10-12 19:48:29,762 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 15:49:00] 2025-10-12 19:48:29,762 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 15:49:00] 2025-10-12 19:48:29,762 | INFO     | update_server=False
[2025-10-12 15:49:00] 2025-10-12 19:48:29,762 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 15:49:00] 2025-10-12 19:48:29,764 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 15:49:00] 2025-10-12 19:48:29,960 | INFO     | all payload control threads have been joined
[2025-10-12 15:49:00] 2025-10-12 19:48:30,125 | INFO     | all data control threads have been joined
[2025-10-12 15:49:00] 2025-10-12 19:48:30,207 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 15:49:00] 2025-10-12 19:48:30,210 | INFO     | aborting loop
[2025-10-12 15:49:00] 2025-10-12 19:48:30,768 | INFO     | [job] retrieve thread has finished
[2025-10-12 15:49:00] 2025-10-12 19:48:30,815 | INFO     | all job control threads have been joined
[2025-10-12 15:49:00] 2025-10-12 19:48:30,853 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 15:49:00] 2025-10-12 19:48:30,966 | INFO     | [payload] control thread has finished
[2025-10-12 15:49:00] 2025-10-12 19:48:31,035 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 15:49:00] 2025-10-12 19:48:31,065 | INFO     | [data] copytool_in thread has finished
[2025-10-12 15:49:00] 2025-10-12 19:48:31,131 | INFO     | [data] control thread has finished
[2025-10-12 15:49:00] 2025-10-12 19:48:31,216 | INFO     | [job] job monitor thread has finished
[2025-10-12 15:49:00] 2025-10-12 19:48:31,489 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 15:49:00] 2025-10-12 19:48:31,513 | INFO     | [job] validate thread has finished
[2025-10-12 15:49:00] 2025-10-12 19:48:31,521 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 15:49:00] 2025-10-12 19:48:31,524 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 15:49:00] 2025-10-12 19:48:31,767 | INFO     | [payload] validate_post thread has finished
[2025-10-12 15:49:00] 2025-10-12 19:48:31,771 | INFO     | [data] copytool_out thread has finished
[2025-10-12 15:49:00] 2025-10-12 19:48:31,813 | INFO     | [payload] failed_post thread has finished
[2025-10-12 15:49:00] 2025-10-12 19:48:31,821 | INFO     | [job] control thread has finished
[2025-10-12 15:49:00] 2025-10-12 19:48:31,859 | INFO     | [job] queue monitor thread has finished
[2025-10-12 15:49:00] 2025-10-12 19:48:32,942 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 15:49:00] 2025-10-12 19:48:35,647 | INFO     | [monitor] cgroup control has ended
[2025-10-12 15:49:00] 2025-10-12 19:48:36,953 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 15:49:00] 2025-10-12 19:48:37,972 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140308002092864)>', '<ExcThread(monitor, started 140307505075968)>']
[2025-10-12 15:49:00] 2025-10-12 19:48:42,998 | INFO     | all workflow threads have been joined
[2025-10-12 15:49:00] 2025-10-12 19:48:42,998 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 15:49:00] 2025-10-12 19:48:42,998 | INFO     | traces error code: 0
[2025-10-12 15:49:00] 2025-10-12 19:48:42,999 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 15:49:00] 2025-10-12 19:48:59,537 | INFO     | PID=3630594 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 15:49:00] 2025-10-12 19:48:59,537 | INFO     | .. there are 31 such processes running
[2025-10-12 15:49:00] 2025-10-12 19:48:59,537 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 15:49:00] 2025-10-12 19:48:59,538 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 15:49:00] 2025-10-12 19:48:59,538 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 15:49:00] 2025-10-12 19:48:59,538 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 15:49:00] 2025-10-12 19:48:59,538 | CRITICAL | thread 'MainThread' is not alive
[2025-10-12 15:49:00] 2025-10-12 19:48:59,538 | INFO     | [monitor] control thread has ended
[2025-10-12 15:49:00] 2025-10-12 19:48:59,731 [wrapper] ==== pilot stdout END ====
[2025-10-12 15:49:00] 2025-10-12 19:48:59,734 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 15:49:00] 2025-10-12 19:48:59,737 [wrapper] pilotpid: 3630594
[2025-10-12 15:49:00] 2025-10-12 19:48:59,747 [wrapper] Pilot exit status: 0
[2025-10-12 15:49:00] 2025-10-12 19:48:59,799 [wrapper] pandaids: 6839162102
[2025-10-12 15:49:00] 2025-10-12 19:48:59,867 [wrapper] cleanup supervisor_pilot 2394340 3630595
[2025-10-12 15:49:00] 2025-10-12 19:48:59,886 [wrapper] Test setup, not cleaning
[2025-10-12 15:49:00] 2025-10-12 19:48:59,908 [wrapper] apfmon messages muted
[2025-10-12 15:49:00] 2025-10-12 19:48:59,938 [wrapper] ==== wrapper stdout END ====
[2025-10-12 15:49:00] 2025-10-12 19:48:59,975 [wrapper] ==== wrapper stderr END ====
[2025-10-12 15:49:00]  *** Error codes and diagnostics ***
[2025-10-12 15:49:00]     "exeErrorCode": 0,
[2025-10-12 15:49:00]     "exeErrorDiag": "",
[2025-10-12 15:49:00]     "pilotErrorCode": 0,
[2025-10-12 15:49:00]     "pilotErrorDiag": "",
[2025-10-12 15:49:00]  *** Listing of results directory ***
[2025-10-12 15:49:00] total 421844
[2025-10-12 15:49:00] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 18:51 pilot3.tar.gz
[2025-10-12 15:49:00] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 19:05 queuedata.json
[2025-10-12 15:49:00] -rwx------. 1 boincer umatlas     36292 Oct 11 19:06 runpilot2-wrapper.sh
[2025-10-12 15:49:00] -rw-r--r--. 1 boincer umatlas       100 Oct 12 00:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 15:49:00] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 00:11 run_atlas
[2025-10-12 15:49:00] -rw-r--r--. 1 boincer umatlas       105 Oct 12 00:11 job.xml
[2025-10-12 15:49:00] -rw-r--r--. 2 boincer umatlas 220410296 Oct 12 00:11 EVNT.46676267._000742.pool.root.1
[2025-10-12 15:49:00] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:11 start_atlas.sh
[2025-10-12 15:49:00] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 00:11 shared
[2025-10-12 15:49:00] -rw-r--r--. 2 boincer umatlas    569685 Oct 12 00:11 input.tar.gz
[2025-10-12 15:49:00] -rw-r--r--. 1 boincer umatlas         0 Oct 12 00:11 boinc_lockfile
[2025-10-12 15:49:00] -rw-r--r--. 1 boincer umatlas      2548 Oct 12 00:11 pandaJob.out
[2025-10-12 15:49:00] -rw-------. 1 boincer umatlas    975512 Oct 12 00:12 agis_schedconf.cvmfs.json
[2025-10-12 15:49:00] drwx------. 5 boincer umatlas      4096 Oct 12 00:12 pilot3
[2025-10-12 15:49:00] -rw-r--r--. 1 boincer umatlas      6659 Oct 12 15:36 init_data.xml
[2025-10-12 15:49:00] -rw-------. 1 boincer umatlas 192887517 Oct 12 15:46 HITS.46676269._066709.pool.root.1
[2025-10-12 15:49:00] -rw-r--r--. 1 boincer umatlas       530 Oct 12 15:46 boinc_task_state.xml
[2025-10-12 15:49:00] -rw-------. 1 boincer umatlas      1043 Oct 12 15:47 memory_monitor_summary.json
[2025-10-12 15:49:00] -rw-------. 1 boincer umatlas   1560580 Oct 12 15:48 agis_ddmendpoints.agis.ALL.json
[2025-10-12 15:49:00] -rw-------. 1 boincer umatlas    972564 Oct 12 15:48 log.46676269._066709.job.log.tgz.1
[2025-10-12 15:49:00] -rw-------. 1 boincer umatlas        95 Oct 12 15:48 pilot_heartbeat.json
[2025-10-12 15:49:00] -rw-------. 1 boincer umatlas      7827 Oct 12 15:48 heartbeat.json
[2025-10-12 15:49:00] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 15:48 boinc_mmap_file
[2025-10-12 15:49:00] -rw-r--r--. 1 boincer umatlas        27 Oct 12 15:48 wrapper_checkpoint.txt
[2025-10-12 15:49:00] -rw-------. 1 boincer umatlas       893 Oct 12 15:48 pilotlog.txt
[2025-10-12 15:49:00] -rw-------. 1 boincer umatlas   6412695 Oct 12 15:48 log.46676269._066709.job.log.1
[2025-10-12 15:49:00] -rw-------. 1 boincer umatlas       357 Oct 12 15:49 output.list
[2025-10-12 15:49:00] -rw-r--r--. 1 boincer umatlas       620 Oct 12 15:49 runtime_log
[2025-10-12 15:49:00] -rw-------. 1 boincer umatlas   7403520 Oct 12 15:49 result.tar.gz
[2025-10-12 15:49:00] -rw-r--r--. 1 boincer umatlas      8694 Oct 12 15:49 runtime_log.err
[2025-10-12 15:49:00] -rw-------. 1 boincer umatlas       655 Oct 12 15:49 QTKODmIqxR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmXlSMDmcsEHKo.diag
[2025-10-12 15:49:00] -rw-r--r--. 1 boincer umatlas     21219 Oct 12 15:49 stderr.txt
[2025-10-12 15:49:00] HITS file was successfully produced:
[2025-10-12 15:49:00] -rw-------. 1 boincer umatlas 192887517 Oct 12 15:46 shared/HITS.pool.root.1
[2025-10-12 15:49:00]  *** Contents of shared directory: ***
[2025-10-12 15:49:00] total 411428
[2025-10-12 15:49:00] -rw-r--r--. 2 boincer umatlas 220410296 Oct 12 00:11 ATLAS.root_0
[2025-10-12 15:49:00] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:11 start_atlas.sh
[2025-10-12 15:49:00] -rw-r--r--. 2 boincer umatlas    569685 Oct 12 00:11 input.tar.gz
[2025-10-12 15:49:00] -rw-------. 1 boincer umatlas 192887517 Oct 12 15:46 HITS.pool.root.1
[2025-10-12 15:49:00] -rw-------. 1 boincer umatlas   7403520 Oct 12 15:49 result.tar.gz
15:49:01 (3620651): run_atlas exited; CPU time 50365.876193
15:49:01 (3620651): called boinc_finish(0)

</stderr_txt>
]]>

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