Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:13 (2248053): wrapper (7.7.26015): starting
00:02:13 (2248053): wrapper: running run_atlas (--nthreads 9)
[2025-10-12 00:02:13] Arguments: --nthreads 9
[2025-10-12 00:02:13] Threads: 9
[2025-10-12 00:02:13] Checking for CVMFS
[2025-10-12 00:02:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 00:02:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 00:02:15] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 00:02:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 00:02:17] 2.13.2.0 1756961 93921 289344 151606 0 153 19669128 32935936 29640 16776704 0 100688495 99.690 82498709 29750 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 00:02:17] CVMFS is ok
[2025-10-12 00:02:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 00:02:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 00:02:17] Further information can be found at the LHC@home message board.
[2025-10-12 00:02:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 00:02:17] Checking for apptainer binary...
[2025-10-12 00:02:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 00:02:17] Running /usr/bin/apptainer --version
[2025-10-12 00:02:17] apptainer version 1.4.3-1.el9
[2025-10-12 00:02:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 00:02:18] c-5-5.aglt2.org
[2025-10-12 00:02:18] apptainer works
[2025-10-12 00:02:19] Set ATHENA_PROC_NUMBER=9
[2025-10-12 00:02:19] Set ATHENA_CORE_NUMBER=9
[2025-10-12 00:02:19] Starting ATLAS job with PandaID=6839241512
[2025-10-12 00:02:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 12:41:31]  *** The last 200 lines of the pilot log: ***
[2025-10-12 12:41:31] 2025-10-12 16:40:43,617 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 12:41:31] 2025-10-12 16:40:43,617 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 12:41:31] 2025-10-12 16:40:43,617 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 12:41:31] 2025-10-12 16:40:43,631 | INFO     | fitting pss+swap vs Time
[2025-10-12 12:41:31] 2025-10-12 16:40:43,632 | INFO     | sum of square deviations: 125134871992.63889
[2025-10-12 12:41:31] 2025-10-12 16:40:43,645 | INFO     | sum of deviations: 851554211802.1578
[2025-10-12 12:41:31] 2025-10-12 16:40:43,646 | INFO     | mean x: 1760264694.5534506
[2025-10-12 12:41:31] 2025-10-12 16:40:43,646 | INFO     | mean y: 2113620.1732070367
[2025-10-12 12:41:31] 2025-10-12 16:40:43,646 | INFO     | -- intersect: -11976648100.395037
[2025-10-12 12:41:31] 2025-10-12 16:40:43,646 | INFO     | intersect: -11976648100.395037
[2025-10-12 12:41:31] 2025-10-12 16:40:43,647 | INFO     | chi2: 9.055447510944171
[2025-10-12 12:41:31] 2025-10-12 16:40:43,648 | INFO     | sum of square deviations: 122611955636.70976
[2025-10-12 12:41:31] 2025-10-12 16:40:43,661 | INFO     | sum of deviations: 896157951939.3966
[2025-10-12 12:41:31] 2025-10-12 16:40:43,662 | INFO     | mean x: 1760264542.0558584
[2025-10-12 12:41:31] 2025-10-12 16:40:43,662 | INFO     | mean y: 2116302.9659400545
[2025-10-12 12:41:31] 2025-10-12 16:40:43,662 | INFO     | -- intersect: -12863473016.51495
[2025-10-12 12:41:31] 2025-10-12 16:40:43,662 | INFO     | intersect: -12863473016.51495
[2025-10-12 12:41:31] 2025-10-12 16:40:43,663 | INFO     | chi2: 8.356013559914429
[2025-10-12 12:41:31] 2025-10-12 16:40:43,663 | INFO     | current chi2=8.356013559914429 (change=7.723902658421086 %)
[2025-10-12 12:41:31] 2025-10-12 16:40:43,664 | INFO     | right removable region: 733
[2025-10-12 12:41:31] 2025-10-12 16:40:43,665 | INFO     | sum of square deviations: 122611841017.8208
[2025-10-12 12:41:31] 2025-10-12 16:40:43,677 | INFO     | sum of deviations: 644368816115.6038
[2025-10-12 12:41:31] 2025-10-12 16:40:43,677 | INFO     | mean x: 1760264847.0544958
[2025-10-12 12:41:31] 2025-10-12 16:40:43,678 | INFO     | mean y: 2126137.634877384
[2025-10-12 12:41:31] 2025-10-12 16:40:43,678 | INFO     | -- intersect: -9248691451.683945
[2025-10-12 12:41:31] 2025-10-12 16:40:43,678 | INFO     | intersect: -9248691451.683945
[2025-10-12 12:41:31] 2025-10-12 16:40:43,679 | INFO     | chi2: 5.086701005547239
[2025-10-12 12:41:31] 2025-10-12 16:40:43,679 | INFO     | current chi2=5.086701005547239 (change=43.827171441283404 %)
[2025-10-12 12:41:31] 2025-10-12 16:40:43,680 | INFO     | sum of square deviations: 120122950218.00015
[2025-10-12 12:41:31] 2025-10-12 16:40:43,693 | INFO     | sum of deviations: 499434921953.332
[2025-10-12 12:41:31] 2025-10-12 16:40:43,693 | INFO     | mean x: 1760264999.5555556
[2025-10-12 12:41:31] 2025-10-12 16:40:43,693 | INFO     | mean y: 2135015.411522634
[2025-10-12 12:41:31] 2025-10-12 16:40:43,693 | INFO     | -- intersect: -7316514843.543357
[2025-10-12 12:41:31] 2025-10-12 16:40:43,693 | INFO     | intersect: -7316514843.543357
[2025-10-12 12:41:31] 2025-10-12 16:40:43,694 | INFO     | chi2: 3.267491095966925
[2025-10-12 12:41:31] 2025-10-12 16:40:43,695 | INFO     | current chi2=3.267491095966925 (change=35.76404250213246 %)
[2025-10-12 12:41:31] 2025-10-12 16:40:43,696 | INFO     | sum of square deviations: 117668055962.89824
[2025-10-12 12:41:31] 2025-10-12 16:40:43,708 | INFO     | sum of deviations: 402712606409.2373
[2025-10-12 12:41:31] 2025-10-12 16:40:43,709 | INFO     | mean x: 1760265152.0538673
[2025-10-12 12:41:31] 2025-10-12 16:40:43,709 | INFO     | mean y: 2141022.55801105
[2025-10-12 12:41:31] 2025-10-12 16:40:43,709 | INFO     | -- intersect: -6022271988.722482
[2025-10-12 12:41:31] 2025-10-12 16:40:43,709 | INFO     | intersect: -6022271988.722482
[2025-10-12 12:41:31] 2025-10-12 16:40:43,710 | INFO     | chi2: 2.5045899546416246
[2025-10-12 12:41:31] 2025-10-12 16:40:43,714 | INFO     | current chi2=2.5045899546416246 (change=23.34822403240676 %)
[2025-10-12 12:41:31] 2025-10-12 16:40:43,714 | INFO     | left removable region: 30
[2025-10-12 12:41:31] 2025-10-12 16:40:43,715 | INFO     | sum of square deviations: 107723126493.09253
[2025-10-12 12:41:31] 2025-10-12 16:40:43,734 | INFO     | sum of deviations: 267102579714.2989
[2025-10-12 12:41:31] 2025-10-12 16:40:43,734 | INFO     | mean x: 1760265426.5305831
[2025-10-12 12:41:31] 2025-10-12 16:40:43,734 | INFO     | mean y: 2156170.637268848
[2025-10-12 12:41:31] 2025-10-12 16:40:43,734 | INFO     | -- intersect: -4362472407.408671
[2025-10-12 12:41:31] 2025-10-12 16:40:43,735 | INFO     | intersect: -4362472407.408671
[2025-10-12 12:41:31] 2025-10-12 16:40:43,736 | INFO     | chi2: 0.7990661447734917
[2025-10-12 12:41:31] 2025-10-12 16:40:43,736 | INFO     | -- intersect: -4362472407.408671
[2025-10-12 12:41:31] 2025-10-12 16:40:43,736 | INFO     | current memory leak: 2.48 B/s (using 703 data points, chi2=0.80)
[2025-10-12 12:41:31] 2025-10-12 16:40:43,737 | INFO     | could have reported an average CPU frequency of 2601 MHz (28 samples)
[2025-10-12 12:41:31] 2025-10-12 16:40:43,737 | INFO     | ..............................
[2025-10-12 12:41:31] 2025-10-12 16:40:43,737 | INFO     | . Timing measurements:
[2025-10-12 12:41:31] 2025-10-12 16:40:43,737 | INFO     | . get job = 2 s
[2025-10-12 12:41:31] 2025-10-12 16:40:43,737 | INFO     | . initial setup = 15 s
[2025-10-12 12:41:31] 2025-10-12 16:40:43,738 | INFO     | . payload setup = 87 s
[2025-10-12 12:41:31] 2025-10-12 16:40:43,738 | INFO     | . stage-in = 0 s
[2025-10-12 12:41:31] 2025-10-12 16:40:43,738 | INFO     | . payload execution = 45096 s
[2025-10-12 12:41:31] 2025-10-12 16:40:43,738 | INFO     | . stage-out = 3 s
[2025-10-12 12:41:31] 2025-10-12 16:40:43,738 | INFO     | . log creation = 0 s
[2025-10-12 12:41:31] 2025-10-12 16:40:43,738 | INFO     | ..............................
[2025-10-12 12:41:31] 2025-10-12 16:40:43,846 | INFO     | 
[2025-10-12 12:41:31] 2025-10-12 16:40:43,847 | INFO     | job summary report
[2025-10-12 12:41:31] 2025-10-12 16:40:43,847 | INFO     | --------------------------------------------------
[2025-10-12 12:41:31] 2025-10-12 16:40:43,847 | INFO     | PanDA job id: 6839241512
[2025-10-12 12:41:31] 2025-10-12 16:40:43,847 | INFO     | task id: 46676269
[2025-10-12 12:41:31] 2025-10-12 16:40:43,847 | INFO     | errors: (none)
[2025-10-12 12:41:31] 2025-10-12 16:40:43,847 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 12:41:31] 2025-10-12 16:40:43,847 | INFO     | pilot state: finished 
[2025-10-12 12:41:31] 2025-10-12 16:40:43,847 | INFO     | transexitcode: 0
[2025-10-12 12:41:31] 2025-10-12 16:40:43,848 | INFO     | exeerrorcode: 0
[2025-10-12 12:41:31] 2025-10-12 16:40:43,848 | INFO     | exeerrordiag: 
[2025-10-12 12:41:31] 2025-10-12 16:40:43,848 | INFO     | exitcode: 0
[2025-10-12 12:41:31] 2025-10-12 16:40:43,848 | INFO     | exitmsg: OK
[2025-10-12 12:41:31] 2025-10-12 16:40:43,848 | INFO     | cpuconsumptiontime: 48931 s
[2025-10-12 12:41:31] 2025-10-12 16:40:43,848 | INFO     | nevents: 400
[2025-10-12 12:41:31] 2025-10-12 16:40:43,848 | INFO     | neventsw: 0
[2025-10-12 12:41:31] 2025-10-12 16:40:43,848 | INFO     | pid: 2279206
[2025-10-12 12:41:31] 2025-10-12 16:40:43,848 | INFO     | pgrp: 2279206
[2025-10-12 12:41:31] 2025-10-12 16:40:43,848 | INFO     | corecount: 9
[2025-10-12 12:41:31] 2025-10-12 16:40:43,848 | INFO     | event service: False
[2025-10-12 12:41:31] 2025-10-12 16:40:43,849 | INFO     | sizes: {0: 2348629, 1: 2348685, 2: 2348713, 3: 2348940, 4: 2348940, 16: 2348968, 27: 2349124, 40: 2349152, 53: 2349180, 64: 2349208, 66: 2349526, 76: 2349834, 4518
[2025-10-12 12:41:31] 2025-10-12 16:40:43,849 | INFO     | --------------------------------------------------
[2025-10-12 12:41:31] 2025-10-12 16:40:43,849 | INFO     | 
[2025-10-12 12:41:31] 2025-10-12 16:40:43,849 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-12 12:41:31] 2025-10-12 16:40:43,879 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 12:41:31] 2025-10-12 16:40:43,879 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 12:41:31] 2025-10-12 16:40:43,879 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 12:41:31] 2025-10-12 16:40:43,880 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 12:41:31] 2025-10-12 16:40:43,880 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 12:41:31] 2025-10-12 16:40:43,880 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 12:41:31] 2025-10-12 16:40:43,880 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 12:41:31] 2025-10-12 16:40:43,880 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 12:41:31] 2025-10-12 16:40:43,880 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 12:41:31] 2025-10-12 16:40:43,880 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 12:41:31] 2025-10-12 16:40:43,880 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 12:41:31] 2025-10-12 16:40:43,881 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 12:41:31] 2025-10-12 16:40:43,881 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 12:41:31] 2025-10-12 16:40:43,881 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 12:41:31] 2025-10-12 16:40:43,881 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 12:41:31] 2025-10-12 16:40:43,881 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 12:41:31] 2025-10-12 16:40:43,881 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 12:41:31] 2025-10-12 16:40:43,882 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 12:41:31] 2025-10-12 16:40:43,882 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 12:41:31] 2025-10-12 16:40:43,882 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 12:41:31] 2025-10-12 16:40:43,882 | INFO     | job 6839241512 has completed (purged errors)
[2025-10-12 12:41:31] 2025-10-12 16:40:43,882 | INFO     | overall cleanup function is called
[2025-10-12 12:41:31] 2025-10-12 16:40:44,891 | INFO     | --- collectZombieJob: --- 10, [2279206]
[2025-10-12 12:41:31] 2025-10-12 16:40:44,891 | INFO     | zombie collector waiting for pid 2279206
[2025-10-12 12:41:31] 2025-10-12 16:40:44,892 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 12:41:31] 2025-10-12 16:40:44,892 | INFO     | collected zombie processes
[2025-10-12 12:41:31] 2025-10-12 16:40:44,892 | INFO     | will attempt to kill all subprocesses of pid=2279206
[2025-10-12 12:41:31] 2025-10-12 16:40:45,628 | INFO     | process IDs to be killed: [2279206] (in reverse order)
[2025-10-12 12:41:31] 2025-10-12 16:40:45,773 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 12:41:31] 2025-10-12 16:40:45,773 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 12:41:31] 2025-10-12 16:40:45,801 | INFO     | did not find any defunct processes belonging to 2279206
[2025-10-12 12:41:31] 2025-10-12 16:40:45,834 | INFO     | did not find any defunct processes belonging to 2279206
[2025-10-12 12:41:31] 2025-10-12 16:40:45,835 | INFO     | ready for new job
[2025-10-12 12:41:31] 2025-10-12 16:40:45,835 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 12:41:31] 2025-10-12 16:40:45,843 | INFO     | ***************************************
[2025-10-12 12:41:31] 2025-10-12 16:40:45,843 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 12:41:31] 2025-10-12 16:40:45,843 | INFO     | ***************************************
[2025-10-12 12:41:31] 2025-10-12 16:40:45,843 | INFO     | 
[2025-10-12 12:41:31] 2025-10-12 16:40:45,858 | INFO     | architecture information:
[2025-10-12 12:41:31] 2025-10-12 16:40:45,862 | INFO     | executing command: cat /etc/os-release
[2025-10-12 12:41:31] 2025-10-12 16:40:45,879 | INFO     | cat /etc/os-release:
[2025-10-12 12:41:31] NAME="CentOS Linux"
[2025-10-12 12:41:31] VERSION="7 (Core)"
[2025-10-12 12:41:31] ID="centos"
[2025-10-12 12:41:31] ID_LIKE="rhel fedora"
[2025-10-12 12:41:31] VERSION_ID="7"
[2025-10-12 12:41:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 12:41:31] ANSI_COLOR="0;31"
[2025-10-12 12:41:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 12:41:31] HOME_URL="https://www.centos.org/"
[2025-10-12 12:41:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 12:41:31] 
[2025-10-12 12:41:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 12:41:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 12:41:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 12:41:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 12:41:31] 
[2025-10-12 12:41:31] 2025-10-12 16:40:45,880 | INFO     | ***************************************
[2025-10-12 12:41:31] 2025-10-12 16:40:46,382 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-12 12:41:31] 2025-10-12 16:40:46,400 | INFO     | sufficient remaining disk space (75668389888 B)
[2025-10-12 12:41:31] 2025-10-12 16:40:46,400 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 12:41:31] 2025-10-12 16:40:46,401 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 12:41:31] 2025-10-12 16:40:46,401 | INFO     | update_server=False
[2025-10-12 12:41:31] 2025-10-12 16:40:46,401 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 12:41:31] 2025-10-12 16:40:46,401 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 12:41:31] 2025-10-12 16:40:46,401 | INFO     | aborting loop
[2025-10-12 12:41:31] 2025-10-12 16:40:46,413 | INFO     | all job control threads have been joined
[2025-10-12 12:41:31] 2025-10-12 16:40:46,871 | INFO     | all data control threads have been joined
[2025-10-12 12:41:31] 2025-10-12 16:40:47,072 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 12:41:31] 2025-10-12 16:40:47,410 | INFO     | [job] retrieve thread has finished
[2025-10-12 12:41:31] 2025-10-12 16:40:47,411 | INFO     | [job] job monitor thread has finished
[2025-10-12 12:41:31] 2025-10-12 16:40:47,419 | INFO     | [job] control thread has finished
[2025-10-12 12:41:31] 2025-10-12 16:40:47,422 | INFO     | [payload] failed_post thread has finished
[2025-10-12 12:41:31] 2025-10-12 16:40:47,528 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 12:41:31] 2025-10-12 16:40:47,529 | INFO     | [data] copytool_in thread has finished
[2025-10-12 12:41:31] 2025-10-12 16:40:47,842 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 12:41:31] 2025-10-12 16:40:47,877 | INFO     | [data] control thread has finished
[2025-10-12 12:41:31] 2025-10-12 16:40:47,925 | INFO     | all payload control threads have been joined
[2025-10-12 12:41:31] 2025-10-12 16:40:48,011 | INFO     | [payload] validate_post thread has finished
[2025-10-12 12:41:31] 2025-10-12 16:40:48,215 | INFO     | [job] validate thread has finished
[2025-10-12 12:41:31] 2025-10-12 16:40:48,459 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 12:41:31] 2025-10-12 16:40:48,759 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 12:41:31] 2025-10-12 16:40:48,867 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 12:41:31] 2025-10-12 16:40:48,868 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 12:41:31] 2025-10-12 16:40:48,932 | INFO     | [payload] control thread has finished
[2025-10-12 12:41:31] 2025-10-12 16:40:49,079 | INFO     | [data] copytool_out thread has finished
[2025-10-12 12:41:31] 2025-10-12 16:40:49,877 | INFO     | [job] queue monitor thread has finished
[2025-10-12 12:41:31] 2025-10-12 16:40:52,769 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 12:41:31] 2025-10-12 16:41:15,943 | INFO     | PID=2256763 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 12:41:31] 2025-10-12 16:41:15,943 | INFO     | .. there are 41 such processes running
[2025-10-12 12:41:31] 2025-10-12 16:41:15,943 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 12:41:31] 2025-10-12 16:41:15,943 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 12:41:31] 2025-10-12 16:41:15,943 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 12:41:31] 2025-10-12 16:41:24,374 | INFO     | [monitor] cgroup control has ended
[2025-10-12 12:41:31] 2025-10-12 16:41:26,088 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140122922026816)>', '<ExcThread(monitor, started 140122133608192)>']
[2025-10-12 12:41:31] 2025-10-12 16:41:27,012 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 12:41:31] 2025-10-12 16:41:27,012 | INFO     | [monitor] control thread has ended
[2025-10-12 12:41:31] 2025-10-12 16:41:31,114 | INFO     | all workflow threads have been joined
[2025-10-12 12:41:31] 2025-10-12 16:41:31,115 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 12:41:31] 2025-10-12 16:41:31,115 | INFO     | traces error code: 0
[2025-10-12 12:41:31] 2025-10-12 16:41:31,115 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 12:41:31] 2025-10-12 16:41:31,307 [wrapper] ==== pilot stdout END ====
[2025-10-12 12:41:31] 2025-10-12 16:41:31,310 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 12:41:31] 2025-10-12 16:41:31,313 [wrapper] pilotpid: 2256763
[2025-10-12 12:41:31] 2025-10-12 16:41:31,316 [wrapper] Pilot exit status: 0
[2025-10-12 12:41:31] 2025-10-12 16:41:31,333 [wrapper] pandaids: 6839241512
[2025-10-12 12:41:31] 2025-10-12 16:41:31,414 [wrapper] cleanup supervisor_pilot  260540 2256764
[2025-10-12 12:41:31] 2025-10-12 16:41:31,418 [wrapper] Test setup, not cleaning
[2025-10-12 12:41:31] 2025-10-12 16:41:31,421 [wrapper] apfmon messages muted
[2025-10-12 12:41:31] 2025-10-12 16:41:31,423 [wrapper] ==== wrapper stdout END ====
[2025-10-12 12:41:31] 2025-10-12 16:41:31,426 [wrapper] ==== wrapper stderr END ====
[2025-10-12 12:41:31]  *** Error codes and diagnostics ***
[2025-10-12 12:41:31]     "exeErrorCode": 0,
[2025-10-12 12:41:31]     "exeErrorDiag": "",
[2025-10-12 12:41:31]     "pilotErrorCode": 0,
[2025-10-12 12:41:31]     "pilotErrorDiag": "",
[2025-10-12 12:41:31]  *** Listing of results directory ***
[2025-10-12 12:41:31] total 417780
[2025-10-12 12:41:31] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 21:26 pilot3.tar.gz
[2025-10-12 12:41:31] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 21:36 queuedata.json
[2025-10-12 12:41:31] -rwx------. 1 boincer umatlas     36292 Oct 11 21:37 runpilot2-wrapper.sh
[2025-10-12 12:41:31] -rw-r--r--. 1 boincer umatlas       100 Oct 12 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 12:41:31] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 00:02 run_atlas
[2025-10-12 12:41:31] -rw-r--r--. 1 boincer umatlas       105 Oct 12 00:02 job.xml
[2025-10-12 12:41:31] -rw-r--r--. 2 boincer umatlas 219633648 Oct 12 00:02 EVNT.46676267._003157.pool.root.1
[2025-10-12 12:41:31] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:02 start_atlas.sh
[2025-10-12 12:41:31] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 00:02 shared
[2025-10-12 12:41:31] -rw-r--r--. 2 boincer umatlas    569680 Oct 12 00:02 input.tar.gz
[2025-10-12 12:41:31] -rw-r--r--. 1 boincer umatlas         0 Oct 12 00:02 boinc_lockfile
[2025-10-12 12:41:31] -rw-r--r--. 1 boincer umatlas      2549 Oct 12 00:02 pandaJob.out
[2025-10-12 12:41:31] -rw-------. 1 boincer umatlas    975512 Oct 12 00:04 agis_schedconf.cvmfs.json
[2025-10-12 12:41:31] drwx------. 5 boincer umatlas      4096 Oct 12 00:04 pilot3
[2025-10-12 12:41:31] -rw-------. 1 boincer umatlas 192817032 Oct 12 12:39 HITS.46676269._068741.pool.root.1
[2025-10-12 12:41:31] -rw-r--r--. 1 boincer umatlas       531 Oct 12 12:39 boinc_task_state.xml
[2025-10-12 12:41:31] -rw-r--r--. 1 boincer umatlas      6658 Oct 12 12:40 init_data.xml
[2025-10-12 12:41:31] -rw-------. 1 boincer umatlas      1045 Oct 12 12:40 memory_monitor_summary.json
[2025-10-12 12:41:31] -rw-------. 1 boincer umatlas   1560580 Oct 12 12:40 agis_ddmendpoints.agis.ALL.json
[2025-10-12 12:41:31] -rw-------. 1 boincer umatlas    834548 Oct 12 12:40 log.46676269._068741.job.log.tgz.1
[2025-10-12 12:41:31] -rw-------. 1 boincer umatlas        95 Oct 12 12:40 pilot_heartbeat.json
[2025-10-12 12:41:31] -rw-------. 1 boincer umatlas      7831 Oct 12 12:40 heartbeat.json
[2025-10-12 12:41:31] -rw-r--r--. 1 boincer umatlas        28 Oct 12 12:41 wrapper_checkpoint.txt
[2025-10-12 12:41:31] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 12:41 boinc_mmap_file
[2025-10-12 12:41:31] -rw-------. 1 boincer umatlas      4824 Oct 12 12:41 pilotlog.txt
[2025-10-12 12:41:31] -rw-------. 1 boincer umatlas   4888377 Oct 12 12:41 log.46676269._068741.job.log.1
[2025-10-12 12:41:31] -rw-------. 1 boincer umatlas       357 Oct 12 12:41 output.list
[2025-10-12 12:41:31] -rw-r--r--. 1 boincer umatlas       620 Oct 12 12:41 runtime_log
[2025-10-12 12:41:31] -rw-------. 1 boincer umatlas   5744640 Oct 12 12:41 result.tar.gz
[2025-10-12 12:41:31] -rw-r--r--. 1 boincer umatlas      8689 Oct 12 12:41 runtime_log.err
[2025-10-12 12:41:31] -rw-------. 1 boincer umatlas       655 Oct 12 12:41 8DiMDmFD0R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmXFiNDm4h7F8n.diag
[2025-10-12 12:41:31] -rw-r--r--. 1 boincer umatlas     21020 Oct 12 12:41 stderr.txt
[2025-10-12 12:41:31] HITS file was successfully produced:
[2025-10-12 12:41:31] -rw-------. 1 boincer umatlas 192817032 Oct 12 12:39 shared/HITS.pool.root.1
[2025-10-12 12:41:31]  *** Contents of shared directory: ***
[2025-10-12 12:41:31] total 408984
[2025-10-12 12:41:31] -rw-r--r--. 2 boincer umatlas 219633648 Oct 12 00:02 ATLAS.root_0
[2025-10-12 12:41:31] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:02 start_atlas.sh
[2025-10-12 12:41:31] -rw-r--r--. 2 boincer umatlas    569680 Oct 12 00:02 input.tar.gz
[2025-10-12 12:41:31] -rw-------. 1 boincer umatlas 192817032 Oct 12 12:39 HITS.pool.root.1
[2025-10-12 12:41:31] -rw-------. 1 boincer umatlas   5744640 Oct 12 12:41 result.tar.gz
12:41:33 (2248053): run_atlas exited; CPU time 50721.994911
12:41:33 (2248053): called boinc_finish(0)

</stderr_txt>
]]>

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