Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:52 (3161838): wrapper (7.7.26015): starting
00:02:52 (3161838): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 00:02:52] Arguments: --nthreads 8
[2025-10-12 00:02:52] Threads: 8
[2025-10-12 00:02:52] Checking for CVMFS
[2025-10-12 00:02:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 00:02:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 00:02:53] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 00:02:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 00:02:55] 2.13.2.0 1387712 18032 249664 151606 2 729 30982014 32935937 22927 16776704 0 44721729 99.625 44036712 29328 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 00:02:55] CVMFS is ok
[2025-10-12 00:02:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 00:02:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 00:02:55] Further information can be found at the LHC@home message board.
[2025-10-12 00:02:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 00:02:55] Checking for apptainer binary...
[2025-10-12 00:02:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 00:02:55] Running /usr/bin/apptainer --version
[2025-10-12 00:02:55] apptainer version 1.4.3-1.el9
[2025-10-12 00:02:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 00:02:55] c6-2-29-3.aglt2.org
[2025-10-12 00:02:55] apptainer works
[2025-10-12 00:02:55] Set ATHENA_PROC_NUMBER=8
[2025-10-12 00:02:55] Set ATHENA_CORE_NUMBER=8
[2025-10-12 00:02:56] Starting ATLAS job with PandaID=6839221658
[2025-10-12 00:02:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 11:21:51]  *** The last 200 lines of the pilot log: ***
[2025-10-12 11:21:51] 2025-10-12 15:20:47,693 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 11:21:51] 2025-10-12 15:20:47,693 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 11:21:51] 2025-10-12 15:20:47,703 | INFO     | fitting pss+swap vs Time
[2025-10-12 11:21:51] 2025-10-12 15:20:47,704 | INFO     | sum of square deviations: 89955879881.26276
[2025-10-12 11:21:51] 2025-10-12 15:20:47,724 | INFO     | sum of deviations: 293986224991.81274
[2025-10-12 11:21:51] 2025-10-12 15:20:47,724 | INFO     | mean x: 1760262218.915408
[2025-10-12 11:21:51] 2025-10-12 15:20:47,725 | INFO     | mean y: 2059384.6752265862
[2025-10-12 11:21:51] 2025-10-12 15:20:47,725 | INFO     | -- intersect: -5750681241.25959
[2025-10-12 11:21:51] 2025-10-12 15:20:47,725 | INFO     | intersect: -5750681241.25959
[2025-10-12 11:21:51] 2025-10-12 15:20:47,726 | INFO     | chi2: 4.198683215139161
[2025-10-12 11:21:51] 2025-10-12 15:20:47,726 | INFO     | sum of square deviations: 87932939777.89342
[2025-10-12 11:21:51] 2025-10-12 15:20:47,740 | INFO     | sum of deviations: 294524963195.671
[2025-10-12 11:21:51] 2025-10-12 15:20:47,741 | INFO     | mean x: 1760262066.4185693
[2025-10-12 11:21:51] 2025-10-12 15:20:47,741 | INFO     | mean y: 2059423.8630136987
[2025-10-12 11:21:51] 2025-10-12 15:20:47,741 | INFO     | -- intersect: -5893809878.768928
[2025-10-12 11:21:51] 2025-10-12 15:20:47,741 | INFO     | intersect: -5893809878.768928
[2025-10-12 11:21:51] 2025-10-12 15:20:47,742 | INFO     | chi2: 4.189381125457769
[2025-10-12 11:21:51] 2025-10-12 15:20:47,742 | INFO     | current chi2=4.189381125457769 (change=0.22154778545453338 %)
[2025-10-12 11:21:51] 2025-10-12 15:20:47,742 | INFO     | right removable region: 656
[2025-10-12 11:21:51] 2025-10-12 15:20:47,743 | INFO     | sum of square deviations: 87932772027.89343
[2025-10-12 11:21:51] 2025-10-12 15:20:47,751 | INFO     | sum of deviations: 145387584181.66837
[2025-10-12 11:21:51] 2025-10-12 15:20:47,751 | INFO     | mean x: 1760262371.4185693
[2025-10-12 11:21:51] 2025-10-12 15:20:47,751 | INFO     | mean y: 2070573.7321156773
[2025-10-12 11:21:51] 2025-10-12 15:20:47,751 | INFO     | -- intersect: -2908338000.9601407
[2025-10-12 11:21:51] 2025-10-12 15:20:47,751 | INFO     | intersect: -2908338000.9601407
[2025-10-12 11:21:51] 2025-10-12 15:20:47,752 | INFO     | chi2: 1.414530315913184
[2025-10-12 11:21:51] 2025-10-12 15:20:47,752 | INFO     | current chi2=1.414530315913184 (change=66.31014431351186 %)
[2025-10-12 11:21:51] 2025-10-12 15:20:47,760 | INFO     | sum of square deviations: 85940222887.01057
[2025-10-12 11:21:51] 2025-10-12 15:20:47,786 | INFO     | sum of deviations: 65439372952.47399
[2025-10-12 11:21:51] 2025-10-12 15:20:47,787 | INFO     | mean x: 1760262523.9217792
[2025-10-12 11:21:51] 2025-10-12 15:20:47,787 | INFO     | mean y: 2076690.8328220858
[2025-10-12 11:21:51] 2025-10-12 15:20:47,787 | INFO     | -- intersect: -1338279104.4811664
[2025-10-12 11:21:51] 2025-10-12 15:20:47,787 | INFO     | intersect: -1338279104.4811664
[2025-10-12 11:21:51] 2025-10-12 15:20:47,788 | INFO     | chi2: 0.6765929841337045
[2025-10-12 11:21:51] 2025-10-12 15:20:47,788 | INFO     | current chi2=0.6765929841337045 (change=52.16836454318664 %)
[2025-10-12 11:21:51] 2025-10-12 15:20:47,789 | INFO     | sum of square deviations: 83978039911.96278
[2025-10-12 11:21:51] 2025-10-12 15:20:47,798 | INFO     | sum of deviations: 35230009341.11745
[2025-10-12 11:21:51] 2025-10-12 15:20:47,798 | INFO     | mean x: 1760262676.4234931
[2025-10-12 11:21:51] 2025-10-12 15:20:47,798 | INFO     | mean y: 2079037.9922720247
[2025-10-12 11:21:51] 2025-10-12 15:20:47,799 | INFO     | -- intersect: -736376760.6692787
[2025-10-12 11:21:51] 2025-10-12 15:20:47,799 | INFO     | intersect: -736376760.6692787
[2025-10-12 11:21:51] 2025-10-12 15:20:47,800 | INFO     | chi2: 0.5739570569913349
[2025-10-12 11:21:51] 2025-10-12 15:20:47,800 | INFO     | current chi2=0.5739570569913349 (change=15.16952282231872 %)
[2025-10-12 11:21:51] 2025-10-12 15:20:47,800 | INFO     | left removable region: 30
[2025-10-12 11:21:51] 2025-10-12 15:20:47,801 | INFO     | sum of square deviations: 76063091992.62039
[2025-10-12 11:21:51] 2025-10-12 15:20:47,818 | INFO     | sum of deviations: 12424297638.060696
[2025-10-12 11:21:51] 2025-10-12 15:20:47,822 | INFO     | mean x: 1760262950.9265175
[2025-10-12 11:21:51] 2025-10-12 15:20:47,823 | INFO     | mean y: 2081201.9361022364
[2025-10-12 11:21:51] 2025-10-12 15:20:47,823 | INFO     | -- intersect: -285443670.5169385
[2025-10-12 11:21:51] 2025-10-12 15:20:47,823 | INFO     | intersect: -285443670.5169385
[2025-10-12 11:21:51] 2025-10-12 15:20:47,824 | INFO     | chi2: 0.5321678419985862
[2025-10-12 11:21:51] 2025-10-12 15:20:47,824 | INFO     | -- intersect: -285443670.5169385
[2025-10-12 11:21:51] 2025-10-12 15:20:47,824 | INFO     | current memory leak: 0.16 B/s (using 626 data points, chi2=0.53)
[2025-10-12 11:21:51] 2025-10-12 15:20:47,826 | INFO     | could have reported an average CPU frequency of 2760 MHz (25 samples)
[2025-10-12 11:21:51] 2025-10-12 15:20:47,827 | INFO     | ..............................
[2025-10-12 11:21:51] 2025-10-12 15:20:47,827 | INFO     | . Timing measurements:
[2025-10-12 11:21:51] 2025-10-12 15:20:47,827 | INFO     | . get job = 0 s
[2025-10-12 11:21:51] 2025-10-12 15:20:47,827 | INFO     | . initial setup = 4 s
[2025-10-12 11:21:51] 2025-10-12 15:20:47,828 | INFO     | . payload setup = 58 s
[2025-10-12 11:21:51] 2025-10-12 15:20:47,828 | INFO     | . stage-in = 0 s
[2025-10-12 11:21:51] 2025-10-12 15:20:47,828 | INFO     | . payload execution = 40407 s
[2025-10-12 11:21:51] 2025-10-12 15:20:47,828 | INFO     | . stage-out = 3 s
[2025-10-12 11:21:51] 2025-10-12 15:20:47,828 | INFO     | . log creation = 0 s
[2025-10-12 11:21:51] 2025-10-12 15:20:47,828 | INFO     | ..............................
[2025-10-12 11:21:51] 2025-10-12 15:20:48,088 | INFO     | 
[2025-10-12 11:21:51] 2025-10-12 15:20:48,088 | INFO     | job summary report
[2025-10-12 11:21:51] 2025-10-12 15:20:48,088 | INFO     | --------------------------------------------------
[2025-10-12 11:21:51] 2025-10-12 15:20:48,089 | INFO     | PanDA job id: 6839221658
[2025-10-12 11:21:51] 2025-10-12 15:20:48,089 | INFO     | task id: 46676269
[2025-10-12 11:21:51] 2025-10-12 15:20:48,089 | INFO     | errors: (none)
[2025-10-12 11:21:51] 2025-10-12 15:20:48,089 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 11:21:51] 2025-10-12 15:20:48,089 | INFO     | pilot state: finished 
[2025-10-12 11:21:51] 2025-10-12 15:20:48,089 | INFO     | transexitcode: 0
[2025-10-12 11:21:51] 2025-10-12 15:20:48,089 | INFO     | exeerrorcode: 0
[2025-10-12 11:21:51] 2025-10-12 15:20:48,089 | INFO     | exeerrordiag: 
[2025-10-12 11:21:51] 2025-10-12 15:20:48,089 | INFO     | exitcode: 0
[2025-10-12 11:21:51] 2025-10-12 15:20:48,089 | INFO     | exitmsg: OK
[2025-10-12 11:21:51] 2025-10-12 15:20:48,089 | INFO     | cpuconsumptiontime: 44102 s
[2025-10-12 11:21:51] 2025-10-12 15:20:48,089 | INFO     | nevents: 400
[2025-10-12 11:21:51] 2025-10-12 15:20:48,089 | INFO     | neventsw: 0
[2025-10-12 11:21:51] 2025-10-12 15:20:48,089 | INFO     | pid: 3212900
[2025-10-12 11:21:51] 2025-10-12 15:20:48,090 | INFO     | pgrp: 3212900
[2025-10-12 11:21:51] 2025-10-12 15:20:48,090 | INFO     | corecount: 8
[2025-10-12 11:21:51] 2025-10-12 15:20:48,090 | INFO     | event service: False
[2025-10-12 11:21:51] 2025-10-12 15:20:48,090 | INFO     | sizes: {0: 2348686, 1: 2348714, 2: 2348913, 14: 2348913, 25: 2348941, 36: 2348969, 44: 2349387, 48: 2349415, 40469: 2391678, 40473: 2400676, 40475: 2400732, 40489:
[2025-10-12 11:21:51] 2025-10-12 15:20:48,090 | INFO     | --------------------------------------------------
[2025-10-12 11:21:51] 2025-10-12 15:20:48,090 | INFO     | 
[2025-10-12 11:21:51] 2025-10-12 15:20:48,090 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-10-12 11:21:51] 2025-10-12 15:20:48,152 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 11:21:51] 2025-10-12 15:20:48,153 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 11:21:51] 2025-10-12 15:20:48,153 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 11:21:51] 2025-10-12 15:20:48,153 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 11:21:51] 2025-10-12 15:20:48,153 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 11:21:51] 2025-10-12 15:20:48,153 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 11:21:51] 2025-10-12 15:20:48,153 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 11:21:51] 2025-10-12 15:20:48,153 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 11:21:51] 2025-10-12 15:20:48,154 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 11:21:51] 2025-10-12 15:20:48,154 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 11:21:51] 2025-10-12 15:20:48,154 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 11:21:51] 2025-10-12 15:20:48,154 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 11:21:51] 2025-10-12 15:20:48,154 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 11:21:51] 2025-10-12 15:20:48,154 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 11:21:51] 2025-10-12 15:20:48,154 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 11:21:51] 2025-10-12 15:20:48,154 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 11:21:51] 2025-10-12 15:20:48,154 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 11:21:51] 2025-10-12 15:20:48,155 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 11:21:51] 2025-10-12 15:20:48,155 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 11:21:51] 2025-10-12 15:20:48,165 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 11:21:51] 2025-10-12 15:20:48,166 | INFO     | job 6839221658 has completed (purged errors)
[2025-10-12 11:21:51] 2025-10-12 15:20:48,166 | INFO     | overall cleanup function is called
[2025-10-12 11:21:51] 2025-10-12 15:20:49,178 | INFO     | --- collectZombieJob: --- 10, [3212900]
[2025-10-12 11:21:51] 2025-10-12 15:20:49,178 | INFO     | zombie collector waiting for pid 3212900
[2025-10-12 11:21:51] 2025-10-12 15:20:49,179 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 11:21:51] 2025-10-12 15:20:49,179 | INFO     | collected zombie processes
[2025-10-12 11:21:51] 2025-10-12 15:20:49,179 | INFO     | will attempt to kill all subprocesses of pid=3212900
[2025-10-12 11:21:51] 2025-10-12 15:20:49,686 | INFO     | process IDs to be killed: [3212900] (in reverse order)
[2025-10-12 11:21:51] 2025-10-12 15:20:49,786 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 11:21:51] 2025-10-12 15:20:49,787 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 11:21:51] 2025-10-12 15:20:49,843 | INFO     | did not find any defunct processes belonging to 3212900
[2025-10-12 11:21:51] 2025-10-12 15:20:49,887 | INFO     | did not find any defunct processes belonging to 3212900
[2025-10-12 11:21:51] 2025-10-12 15:20:49,888 | INFO     | ready for new job
[2025-10-12 11:21:51] 2025-10-12 15:20:49,888 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 11:21:51] 2025-10-12 15:20:49,900 | INFO     | ***************************************
[2025-10-12 11:21:51] 2025-10-12 15:20:49,900 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 11:21:51] 2025-10-12 15:20:49,900 | INFO     | ***************************************
[2025-10-12 11:21:51] 2025-10-12 15:20:49,900 | INFO     | 
[2025-10-12 11:21:51] 2025-10-12 15:20:49,916 | INFO     | architecture information:
[2025-10-12 11:21:51] 2025-10-12 15:20:49,924 | INFO     | executing command: cat /etc/os-release
[2025-10-12 11:21:51] 2025-10-12 15:20:50,007 | INFO     | cat /etc/os-release:
[2025-10-12 11:21:51] NAME="CentOS Linux"
[2025-10-12 11:21:51] VERSION="7 (Core)"
[2025-10-12 11:21:51] ID="centos"
[2025-10-12 11:21:51] ID_LIKE="rhel fedora"
[2025-10-12 11:21:51] VERSION_ID="7"
[2025-10-12 11:21:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 11:21:51] ANSI_COLOR="0;31"
[2025-10-12 11:21:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 11:21:51] HOME_URL="https://www.centos.org/"
[2025-10-12 11:21:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 11:21:51] 
[2025-10-12 11:21:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 11:21:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 11:21:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 11:21:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 11:21:51] 
[2025-10-12 11:21:51] 2025-10-12 15:20:50,008 | INFO     | ***************************************
[2025-10-12 11:21:51] 2025-10-12 15:20:50,511 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-10-12 11:21:51] 2025-10-12 15:20:50,573 | INFO     | sufficient remaining disk space (75886493696 B)
[2025-10-12 11:21:51] 2025-10-12 15:20:50,575 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 11:21:51] 2025-10-12 15:20:50,575 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 11:21:51] 2025-10-12 15:20:50,576 | INFO     | update_server=False
[2025-10-12 11:21:51] 2025-10-12 15:20:50,576 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 11:21:51] 2025-10-12 15:20:50,576 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 11:21:51] 2025-10-12 15:20:50,576 | INFO     | aborting loop
[2025-10-12 11:21:51] 2025-10-12 15:20:50,577 | INFO     | all data control threads have been joined
[2025-10-12 11:21:51] 2025-10-12 15:20:50,649 | INFO     | all payload control threads have been joined
[2025-10-12 11:21:51] 2025-10-12 15:20:51,532 | INFO     | all job control threads have been joined
[2025-10-12 11:21:51] 2025-10-12 15:20:51,582 | INFO     | [job] retrieve thread has finished
[2025-10-12 11:21:51] 2025-10-12 15:20:51,583 | INFO     | [data] control thread has finished
[2025-10-12 11:21:51] 2025-10-12 15:20:51,587 | INFO     | [job] job monitor thread has finished
[2025-10-12 11:21:51] 2025-10-12 15:20:51,655 | INFO     | [payload] control thread has finished
[2025-10-12 11:21:51] 2025-10-12 15:20:51,678 | INFO     | [payload] validate_post thread has finished
[2025-10-12 11:21:51] 2025-10-12 15:20:51,840 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 11:21:51] 2025-10-12 15:20:51,983 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 11:21:51] 2025-10-12 15:20:52,195 | INFO     | [data] copytool_in thread has finished
[2025-10-12 11:21:51] 2025-10-12 15:20:52,381 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 11:21:51] 2025-10-12 15:20:52,432 | INFO     | [payload] failed_post thread has finished
[2025-10-12 11:21:51] 2025-10-12 15:20:52,538 | INFO     | [job] control thread has finished
[2025-10-12 11:21:51] 2025-10-12 15:20:52,800 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 11:21:51] 2025-10-12 15:20:52,926 | INFO     | [job] validate thread has finished
[2025-10-12 11:21:51] 2025-10-12 15:20:53,105 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 11:21:51] 2025-10-12 15:20:53,520 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 11:21:51] 2025-10-12 15:20:53,994 | INFO     | [data] copytool_out thread has finished
[2025-10-12 11:21:51] 2025-10-12 15:20:54,111 | INFO     | [job] queue monitor thread has finished
[2025-10-12 11:21:51] 2025-10-12 15:20:57,529 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 11:21:51] 2025-10-12 15:21:01,178 | INFO     | job.realtimelogging is not enabled
[2025-10-12 11:21:51] 2025-10-12 15:21:02,184 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 11:21:51] 2025-10-12 15:21:20,547 | INFO     | PID=3177308 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 11:21:51] 2025-10-12 15:21:20,549 | INFO     | .. there are 22 such processes running
[2025-10-12 11:21:51] 2025-10-12 15:21:20,550 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 11:21:51] 2025-10-12 15:21:20,555 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 11:21:51] 2025-10-12 15:21:20,557 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 11:21:51] 2025-10-12 15:21:44,561 | INFO     | [monitor] cgroup control has ended
[2025-10-12 11:21:51] 2025-10-12 15:21:45,763 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139783648499520)>', '<ExcThread(monitor, started 139782906693376)>']
[2025-10-12 11:21:51] 2025-10-12 15:21:46,721 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 11:21:51] 2025-10-12 15:21:46,722 | INFO     | [monitor] control thread has ended
[2025-10-12 11:21:51] 2025-10-12 15:21:50,795 | INFO     | all workflow threads have been joined
[2025-10-12 11:21:51] 2025-10-12 15:21:50,797 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 11:21:51] 2025-10-12 15:21:50,799 | INFO     | traces error code: 0
[2025-10-12 11:21:51] 2025-10-12 15:21:50,799 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 11:21:51] 2025-10-12 15:21:51,076 [wrapper] ==== pilot stdout END ====
[2025-10-12 11:21:51] 2025-10-12 15:21:51,080 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 11:21:51] 2025-10-12 15:21:51,084 [wrapper] pilotpid: 3177308
[2025-10-12 11:21:51] 2025-10-12 15:21:51,087 [wrapper] Pilot exit status: 0
[2025-10-12 11:21:51] 2025-10-12 15:21:51,103 [wrapper] pandaids: 6839221658
[2025-10-12 11:21:51] 2025-10-12 15:21:51,188 [wrapper] cleanup supervisor_pilot  844165 3177309
[2025-10-12 11:21:51] 2025-10-12 15:21:51,193 [wrapper] Test setup, not cleaning
[2025-10-12 11:21:51] 2025-10-12 15:21:51,197 [wrapper] apfmon messages muted
[2025-10-12 11:21:51] 2025-10-12 15:21:51,201 [wrapper] ==== wrapper stdout END ====
[2025-10-12 11:21:51] 2025-10-12 15:21:51,204 [wrapper] ==== wrapper stderr END ====
[2025-10-12 11:21:51]  *** Error codes and diagnostics ***
[2025-10-12 11:21:51]     "exeErrorCode": 0,
[2025-10-12 11:21:51]     "exeErrorDiag": "",
[2025-10-12 11:21:51]     "pilotErrorCode": 0,
[2025-10-12 11:21:51]     "pilotErrorDiag": "",
[2025-10-12 11:21:51]  *** Listing of results directory ***
[2025-10-12 11:21:51] total 420360
[2025-10-12 11:21:51] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 21:26 pilot3.tar.gz
[2025-10-12 11:21:51] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 21:36 queuedata.json
[2025-10-12 11:21:51] -rwx------. 1 boincer umatlas     36292 Oct 11 21:37 runpilot2-wrapper.sh
[2025-10-12 11:21:51] -rw-r--r--. 1 boincer umatlas       100 Oct 12 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 11:21:51] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 00:02 run_atlas
[2025-10-12 11:21:51] -rw-r--r--. 1 boincer umatlas       105 Oct 12 00:02 job.xml
[2025-10-12 11:21:51] -rw-r--r--. 2 boincer umatlas 221084771 Oct 12 00:02 EVNT.46676267._003155.pool.root.1
[2025-10-12 11:21:51] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:02 start_atlas.sh
[2025-10-12 11:21:51] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 00:02 shared
[2025-10-12 11:21:51] -rw-r--r--. 2 boincer umatlas    569682 Oct 12 00:02 input.tar.gz
[2025-10-12 11:21:51] -rw-r--r--. 1 boincer umatlas         0 Oct 12 00:02 boinc_lockfile
[2025-10-12 11:21:51] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 00:02 pandaJob.out
[2025-10-12 11:21:51] -rw-------. 1 boincer umatlas    975512 Oct 12 00:04 agis_schedconf.cvmfs.json
[2025-10-12 11:21:51] drwx------. 5 boincer umatlas      4096 Oct 12 00:04 pilot3
[2025-10-12 11:21:51] -rw-r--r--. 1 boincer umatlas      6843 Oct 12 11:18 init_data.xml
[2025-10-12 11:21:51] -rw-------. 1 boincer umatlas 194286056 Oct 12 11:19 HITS.46676269._068670.pool.root.1
[2025-10-12 11:21:51] -rw-r--r--. 1 boincer umatlas       531 Oct 12 11:19 boinc_task_state.xml
[2025-10-12 11:21:51] -rw-------. 1 boincer umatlas      1044 Oct 12 11:20 memory_monitor_summary.json
[2025-10-12 11:21:51] -rw-------. 1 boincer umatlas   1560580 Oct 12 11:20 agis_ddmendpoints.agis.ALL.json
[2025-10-12 11:21:51] -rw-------. 1 boincer umatlas    787299 Oct 12 11:20 log.46676269._068670.job.log.tgz.1
[2025-10-12 11:21:51] -rw-------. 1 boincer umatlas      7828 Oct 12 11:20 heartbeat.json
[2025-10-12 11:21:51] -rw-------. 1 boincer umatlas        95 Oct 12 11:21 pilot_heartbeat.json
[2025-10-12 11:21:51] -rw-------. 1 boincer umatlas      4896 Oct 12 11:21 pilotlog.txt
[2025-10-12 11:21:51] -rw-r--r--. 1 boincer umatlas        28 Oct 12 11:21 wrapper_checkpoint.txt
[2025-10-12 11:21:51] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 11:21 boinc_mmap_file
[2025-10-12 11:21:51] -rw-------. 1 boincer umatlas   4797180 Oct 12 11:21 log.46676269._068670.job.log.1
[2025-10-12 11:21:51] -rw-------. 1 boincer umatlas       357 Oct 12 11:21 output.list
[2025-10-12 11:21:51] -rw-r--r--. 1 boincer umatlas       620 Oct 12 11:21 runtime_log
[2025-10-12 11:21:51] -rw-------. 1 boincer umatlas   5601280 Oct 12 11:21 result.tar.gz
[2025-10-12 11:21:51] -rw-r--r--. 1 boincer umatlas      8709 Oct 12 11:21 runtime_log.err
[2025-10-12 11:21:51] -rw-------. 1 boincer umatlas       658 Oct 12 11:21 lXlLDmFD0R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmBFiNDmicOHBo.diag
[2025-10-12 11:21:51] -rw-r--r--. 1 boincer umatlas     21022 Oct 12 11:21 stderr.txt
[2025-10-12 11:21:51] HITS file was successfully produced:
[2025-10-12 11:21:51] -rw-------. 1 boincer umatlas 194286056 Oct 12 11:19 shared/HITS.pool.root.1
[2025-10-12 11:21:51]  *** Contents of shared directory: ***
[2025-10-12 11:21:51] total 411696
[2025-10-12 11:21:51] -rw-r--r--. 2 boincer umatlas 221084771 Oct 12 00:02 ATLAS.root_0
[2025-10-12 11:21:51] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:02 start_atlas.sh
[2025-10-12 11:21:51] -rw-r--r--. 2 boincer umatlas    569682 Oct 12 00:02 input.tar.gz
[2025-10-12 11:21:51] -rw-------. 1 boincer umatlas 194286056 Oct 12 11:19 HITS.pool.root.1
[2025-10-12 11:21:51] -rw-------. 1 boincer umatlas   5601280 Oct 12 11:21 result.tar.gz
11:21:52 (3161838): run_atlas exited; CPU time 45517.248480
11:21:52 (3161838): called boinc_finish(0)

</stderr_txt>
]]>

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