Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:22 (2865028): wrapper (7.7.26015): starting
00:02:22 (2865028): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 00:02:22] Arguments: --nthreads 8
[2025-10-12 00:02:22] Threads: 8
[2025-10-12 00:02:22] Checking for CVMFS
[2025-10-12 00:02:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 00:02:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 00:02:23] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 00:02:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 00:02:23] 2.13.2.0 4298 23844 222736 151606 2 196 23529397 32935936 4331 16776704 0 68661574 99.719 51562642 29847 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 00:02:23] CVMFS is ok
[2025-10-12 00:02:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 00:02:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 00:02:23] Further information can be found at the LHC@home message board.
[2025-10-12 00:02:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 00:02:23] Checking for apptainer binary...
[2025-10-12 00:02:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 00:02:23] Running /usr/bin/apptainer --version
[2025-10-12 00:02:23] apptainer version 1.4.3-1.el9
[2025-10-12 00:02:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 00:02:23] c-8-24.aglt2.org
[2025-10-12 00:02:23] apptainer works
[2025-10-12 00:02:23] Set ATHENA_PROC_NUMBER=8
[2025-10-12 00:02:23] Set ATHENA_CORE_NUMBER=8
[2025-10-12 00:02:23] Starting ATLAS job with PandaID=6839221656
[2025-10-12 00:02:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 01:47:49]  *** The last 200 lines of the pilot log: ***
[2025-10-12 01:47:49] 2025-10-12 05:47:05,972 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 01:47:49] 2025-10-12 05:47:05,972 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 01:47:49] 2025-10-12 05:47:05,975 | INFO     | fitting pss+swap vs Time
[2025-10-12 01:47:49] 2025-10-12 05:47:05,975 | INFO     | sum of square deviations: 338804492.0
[2025-10-12 01:47:49] 2025-10-12 05:47:05,976 | INFO     | sum of deviations: 11557004063.000002
[2025-10-12 01:47:49] 2025-10-12 05:47:05,976 | INFO     | mean x: 1760244889.0
[2025-10-12 01:47:49] 2025-10-12 05:47:05,976 | INFO     | mean y: 2111829.504854369
[2025-10-12 01:47:49] 2025-10-12 05:47:05,976 | INFO     | -- intersect: -60041830368.427956
[2025-10-12 01:47:49] 2025-10-12 05:47:05,976 | INFO     | intersect: -60041830368.427956
[2025-10-12 01:47:49] 2025-10-12 05:47:05,977 | INFO     | chi2: 2.4232014638914006
[2025-10-12 01:47:49] 2025-10-12 05:47:05,977 | INFO     | sum of square deviations: 291817564.5
[2025-10-12 01:47:49] 2025-10-12 05:47:05,977 | INFO     | sum of deviations: 17140976728.500002
[2025-10-12 01:47:49] 2025-10-12 05:47:05,978 | INFO     | mean x: 1760244736.5
[2025-10-12 01:47:49] 2025-10-12 05:47:05,978 | INFO     | mean y: 2129196.9081632653
[2025-10-12 01:47:49] 2025-10-12 05:47:05,978 | INFO     | -- intersect: -103392312177.81972
[2025-10-12 01:47:49] 2025-10-12 05:47:05,978 | INFO     | intersect: -103392312177.81972
[2025-10-12 01:47:49] 2025-10-12 05:47:05,978 | INFO     | chi2: 1.6393484546007613
[2025-10-12 01:47:49] 2025-10-12 05:47:05,978 | INFO     | current chi2=1.6393484546007613 (change=32.34782666530152 %)
[2025-10-12 01:47:49] 2025-10-12 05:47:05,979 | INFO     | sum of square deviations: 249388862.0
[2025-10-12 01:47:49] 2025-10-12 05:47:05,979 | INFO     | sum of deviations: 16231448215.000002
[2025-10-12 01:47:49] 2025-10-12 05:47:05,979 | INFO     | mean x: 1760244584.0
[2025-10-12 01:47:49] 2025-10-12 05:47:05,979 | INFO     | mean y: 2125889.494623656
[2025-10-12 01:47:49] 2025-10-12 05:47:05,980 | INFO     | -- intersect: -114563210275.87999
[2025-10-12 01:47:49] 2025-10-12 05:47:05,980 | INFO     | intersect: -114563210275.87999
[2025-10-12 01:47:49] 2025-10-12 05:47:05,980 | INFO     | chi2: 1.637992097087116
[2025-10-12 01:47:49] 2025-10-12 05:47:05,980 | INFO     | current chi2=1.637992097087116 (change=0.08273759674697032 %)
[2025-10-12 01:47:49] 2025-10-12 05:47:05,980 | INFO     | right removable region: 92
[2025-10-12 01:47:49] 2025-10-12 05:47:05,980 | INFO     | sum of square deviations: 291817564.5
[2025-10-12 01:47:49] 2025-10-12 05:47:05,981 | INFO     | sum of deviations: -4349462595.5
[2025-10-12 01:47:49] 2025-10-12 05:47:05,981 | INFO     | mean x: 1760245041.5
[2025-10-12 01:47:49] 2025-10-12 05:47:05,981 | INFO     | mean y: 2162741.051020408
[2025-10-12 01:47:49] 2025-10-12 05:47:05,981 | INFO     | -- intersect: 26238143361.46565
[2025-10-12 01:47:49] 2025-10-12 05:47:05,982 | INFO     | intersect: 26238143361.46565
[2025-10-12 01:47:49] 2025-10-12 05:47:05,982 | INFO     | chi2: 0.8576595201098738
[2025-10-12 01:47:49] 2025-10-12 05:47:05,982 | INFO     | current chi2=0.8576595201098738 (change=64.6063468972751 %)
[2025-10-12 01:47:49] 2025-10-12 05:47:05,982 | INFO     | sum of square deviations: 249388862.0
[2025-10-12 01:47:49] 2025-10-12 05:47:05,983 | INFO     | sum of deviations: -5010309298.0
[2025-10-12 01:47:49] 2025-10-12 05:47:05,983 | INFO     | mean x: 1760245194.0
[2025-10-12 01:47:49] 2025-10-12 05:47:05,983 | INFO     | mean y: 2164899.9139784947
[2025-10-12 01:47:49] 2025-10-12 05:47:05,983 | INFO     | -- intersect: 35366105340.277405
[2025-10-12 01:47:49] 2025-10-12 05:47:05,983 | INFO     | intersect: 35366105340.277405
[2025-10-12 01:47:49] 2025-10-12 05:47:05,983 | INFO     | chi2: 0.8287568701914392
[2025-10-12 01:47:49] 2025-10-12 05:47:05,984 | INFO     | current chi2=0.8287568701914392 (change=3.3699445106995283 %)
[2025-10-12 01:47:49] 2025-10-12 05:47:05,984 | INFO     | left removable region: 20
[2025-10-12 01:47:49] 2025-10-12 05:47:05,984 | INFO     | sum of square deviations: 115715658.0
[2025-10-12 01:47:49] 2025-10-12 05:47:05,984 | INFO     | sum of deviations: 93450170.00000003
[2025-10-12 01:47:49] 2025-10-12 05:47:05,984 | INFO     | mean x: 1760245163.5
[2025-10-12 01:47:49] 2025-10-12 05:47:05,985 | INFO     | mean y: 2190660.8333333335
[2025-10-12 01:47:49] 2025-10-12 05:47:05,985 | INFO     | -- intersect: -1419356021.9047353
[2025-10-12 01:47:49] 2025-10-12 05:47:05,985 | INFO     | intersect: -1419356021.9047353
[2025-10-12 01:47:49] 2025-10-12 05:47:05,985 | INFO     | chi2: 0.007026821660089273
[2025-10-12 01:47:49] 2025-10-12 05:47:05,985 | INFO     | -- intersect: -1419356021.9047353
[2025-10-12 01:47:49] 2025-10-12 05:47:05,985 | INFO     | current memory leak: 0.81 B/s (using 72 data points, chi2=0.01)
[2025-10-12 01:47:49] 2025-10-12 05:47:05,986 | INFO     | could have reported an average CPU frequency of 2700 MHz (7 samples)
[2025-10-12 01:47:49] 2025-10-12 05:47:05,986 | INFO     | ..............................
[2025-10-12 01:47:49] 2025-10-12 05:47:05,986 | INFO     | . Timing measurements:
[2025-10-12 01:47:49] 2025-10-12 05:47:05,986 | INFO     | . get job = 0 s
[2025-10-12 01:47:49] 2025-10-12 05:47:05,986 | INFO     | . initial setup = 2 s
[2025-10-12 01:47:49] 2025-10-12 05:47:05,986 | INFO     | . payload setup = 5 s
[2025-10-12 01:47:49] 2025-10-12 05:47:05,986 | INFO     | . stage-in = 0 s
[2025-10-12 01:47:49] 2025-10-12 05:47:05,987 | INFO     | . payload execution = 6237 s
[2025-10-12 01:47:49] 2025-10-12 05:47:05,987 | INFO     | . stage-out = 0 s
[2025-10-12 01:47:49] 2025-10-12 05:47:05,987 | INFO     | . log creation = 0 s
[2025-10-12 01:47:49] 2025-10-12 05:47:05,987 | INFO     | ..............................
[2025-10-12 01:47:49] 2025-10-12 05:47:06,519 | INFO     | 
[2025-10-12 01:47:49] 2025-10-12 05:47:06,519 | INFO     | job summary report
[2025-10-12 01:47:49] 2025-10-12 05:47:06,519 | INFO     | --------------------------------------------------
[2025-10-12 01:47:49] 2025-10-12 05:47:06,519 | INFO     | PanDA job id: 6839221656
[2025-10-12 01:47:49] 2025-10-12 05:47:06,519 | INFO     | task id: 46676269
[2025-10-12 01:47:49] 2025-10-12 05:47:06,520 | INFO     | errors: (none)
[2025-10-12 01:47:49] 2025-10-12 05:47:06,520 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 01:47:49] 2025-10-12 05:47:06,520 | INFO     | pilot state: finished 
[2025-10-12 01:47:49] 2025-10-12 05:47:06,520 | INFO     | transexitcode: 0
[2025-10-12 01:47:49] 2025-10-12 05:47:06,520 | INFO     | exeerrorcode: 0
[2025-10-12 01:47:49] 2025-10-12 05:47:06,520 | INFO     | exeerrordiag: 
[2025-10-12 01:47:49] 2025-10-12 05:47:06,520 | INFO     | exitcode: 0
[2025-10-12 01:47:49] 2025-10-12 05:47:06,520 | INFO     | exitmsg: OK
[2025-10-12 01:47:49] 2025-10-12 05:47:06,520 | INFO     | cpuconsumptiontime: 46053 s
[2025-10-12 01:47:49] 2025-10-12 05:47:06,521 | INFO     | nevents: 400
[2025-10-12 01:47:49] 2025-10-12 05:47:06,521 | INFO     | neventsw: 0
[2025-10-12 01:47:49] 2025-10-12 05:47:06,521 | INFO     | pid: 2875081
[2025-10-12 01:47:49] 2025-10-12 05:47:06,521 | INFO     | pgrp: 2875081
[2025-10-12 01:47:49] 2025-10-12 05:47:06,521 | INFO     | corecount: 8
[2025-10-12 01:47:49] 2025-10-12 05:47:06,521 | INFO     | event service: False
[2025-10-12 01:47:49] 2025-10-12 05:47:06,521 | INFO     | sizes: {0: 2348686, 1: 2348885, 4: 2349147, 11: 2349175, 6246: 2376229, 6249: 2385227, 6251: 2385411, 6257: 2385605}
[2025-10-12 01:47:49] 2025-10-12 05:47:06,521 | INFO     | --------------------------------------------------
[2025-10-12 01:47:49] 2025-10-12 05:47:06,521 | INFO     | 
[2025-10-12 01:47:49] 2025-10-12 05:47:06,522 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-12 01:47:49] 2025-10-12 05:47:06,540 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 01:47:49] 2025-10-12 05:47:06,541 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 01:47:49] 2025-10-12 05:47:06,541 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 01:47:49] 2025-10-12 05:47:06,541 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 01:47:49] 2025-10-12 05:47:06,541 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 01:47:49] 2025-10-12 05:47:06,541 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 01:47:49] 2025-10-12 05:47:06,541 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 01:47:49] 2025-10-12 05:47:06,541 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 01:47:49] 2025-10-12 05:47:06,542 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 01:47:49] 2025-10-12 05:47:06,542 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 01:47:49] 2025-10-12 05:47:06,542 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 01:47:49] 2025-10-12 05:47:06,542 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 01:47:49] 2025-10-12 05:47:06,542 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 01:47:49] 2025-10-12 05:47:06,542 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 01:47:49] 2025-10-12 05:47:06,542 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 01:47:49] 2025-10-12 05:47:06,542 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 01:47:49] 2025-10-12 05:47:06,543 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 01:47:49] 2025-10-12 05:47:06,543 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 01:47:49] 2025-10-12 05:47:06,543 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 01:47:49] 2025-10-12 05:47:06,543 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 01:47:49] 2025-10-12 05:47:06,543 | INFO     | job 6839221656 has completed (purged errors)
[2025-10-12 01:47:49] 2025-10-12 05:47:06,543 | INFO     | overall cleanup function is called
[2025-10-12 01:47:49] 2025-10-12 05:47:07,551 | INFO     | --- collectZombieJob: --- 10, [2875081]
[2025-10-12 01:47:49] 2025-10-12 05:47:07,552 | INFO     | zombie collector waiting for pid 2875081
[2025-10-12 01:47:49] 2025-10-12 05:47:07,552 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 01:47:49] 2025-10-12 05:47:07,552 | INFO     | collected zombie processes
[2025-10-12 01:47:49] 2025-10-12 05:47:07,552 | INFO     | will attempt to kill all subprocesses of pid=2875081
[2025-10-12 01:47:49] 2025-10-12 05:47:07,824 | INFO     | process IDs to be killed: [2875081] (in reverse order)
[2025-10-12 01:47:49] 2025-10-12 05:47:07,898 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 01:47:49] 2025-10-12 05:47:07,898 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 01:47:49] 2025-10-12 05:47:07,906 | INFO     | did not find any defunct processes belonging to 2875081
[2025-10-12 01:47:49] 2025-10-12 05:47:07,912 | INFO     | did not find any defunct processes belonging to 2875081
[2025-10-12 01:47:49] 2025-10-12 05:47:07,913 | INFO     | ready for new job
[2025-10-12 01:47:49] 2025-10-12 05:47:07,913 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 01:47:49] 2025-10-12 05:47:07,915 | INFO     | ***************************************
[2025-10-12 01:47:49] 2025-10-12 05:47:07,915 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 01:47:49] 2025-10-12 05:47:07,915 | INFO     | ***************************************
[2025-10-12 01:47:49] 2025-10-12 05:47:07,915 | INFO     | 
[2025-10-12 01:47:49] 2025-10-12 05:47:07,928 | INFO     | architecture information:
[2025-10-12 01:47:49] 2025-10-12 05:47:07,929 | INFO     | executing command: cat /etc/os-release
[2025-10-12 01:47:49] 2025-10-12 05:47:07,942 | INFO     | cat /etc/os-release:
[2025-10-12 01:47:49] NAME="CentOS Linux"
[2025-10-12 01:47:49] VERSION="7 (Core)"
[2025-10-12 01:47:49] ID="centos"
[2025-10-12 01:47:49] ID_LIKE="rhel fedora"
[2025-10-12 01:47:49] VERSION_ID="7"
[2025-10-12 01:47:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 01:47:49] ANSI_COLOR="0;31"
[2025-10-12 01:47:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 01:47:49] HOME_URL="https://www.centos.org/"
[2025-10-12 01:47:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 01:47:49] 
[2025-10-12 01:47:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 01:47:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 01:47:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 01:47:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 01:47:49] 
[2025-10-12 01:47:49] 2025-10-12 05:47:07,943 | INFO     | ***************************************
[2025-10-12 01:47:49] 2025-10-12 05:47:08,446 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-12 01:47:49] 2025-10-12 05:47:08,461 | INFO     | sufficient remaining disk space (74155294720 B)
[2025-10-12 01:47:49] 2025-10-12 05:47:08,461 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 01:47:49] 2025-10-12 05:47:08,462 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 01:47:49] 2025-10-12 05:47:08,462 | INFO     | update_server=False
[2025-10-12 01:47:49] 2025-10-12 05:47:08,462 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 01:47:49] 2025-10-12 05:47:08,462 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 01:47:49] 2025-10-12 05:47:08,462 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 01:47:49] 2025-10-12 05:47:08,463 | INFO     | aborting loop
[2025-10-12 01:47:49] 2025-10-12 05:47:08,980 | INFO     | all job control threads have been joined
[2025-10-12 01:47:49] 2025-10-12 05:47:09,094 | INFO     | all payload control threads have been joined
[2025-10-12 01:47:49] 2025-10-12 05:47:09,382 | INFO     | all data control threads have been joined
[2025-10-12 01:47:49] 2025-10-12 05:47:09,467 | INFO     | [job] retrieve thread has finished
[2025-10-12 01:47:49] 2025-10-12 05:47:09,468 | INFO     | [job] job monitor thread has finished
[2025-10-12 01:47:49] 2025-10-12 05:47:09,542 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 01:47:49] 2025-10-12 05:47:09,643 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 01:47:49] 2025-10-12 05:47:09,799 | INFO     | [payload] failed_post thread has finished
[2025-10-12 01:47:49] 2025-10-12 05:47:09,944 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 01:47:49] 2025-10-12 05:47:09,985 | INFO     | [job] control thread has finished
[2025-10-12 01:47:49] 2025-10-12 05:47:10,099 | INFO     | [payload] control thread has finished
[2025-10-12 01:47:49] 2025-10-12 05:47:10,387 | INFO     | [data] control thread has finished
[2025-10-12 01:47:49] 2025-10-12 05:47:10,451 | INFO     | [data] copytool_in thread has finished
[2025-10-12 01:47:49] 2025-10-12 05:47:10,468 | INFO     | [data] copytool_out thread has finished
[2025-10-12 01:47:49] 2025-10-12 05:47:10,861 | INFO     | [job] validate thread has finished
[2025-10-12 01:47:49] 2025-10-12 05:47:10,904 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 01:47:49] 2025-10-12 05:47:10,923 | INFO     | [payload] validate_post thread has finished
[2025-10-12 01:47:49] 2025-10-12 05:47:11,088 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 01:47:49] 2025-10-12 05:47:11,104 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 01:47:49] 2025-10-12 05:47:12,110 | INFO     | [job] queue monitor thread has finished
[2025-10-12 01:47:49] 2025-10-12 05:47:15,093 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 01:47:49] 2025-10-12 05:47:30,550 [wrapper] supervise_pilot (15 min periods counter: 8)
[2025-10-12 01:47:49] 2025-10-12 05:47:38,624 | INFO     | PID=2868726 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 01:47:49] 2025-10-12 05:47:38,625 | INFO     | .. there are 6 such processes running
[2025-10-12 01:47:49] 2025-10-12 05:47:38,626 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 01:47:49] 2025-10-12 05:47:38,626 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 01:47:49] 2025-10-12 05:47:38,626 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 01:47:49] 2025-10-12 05:47:44,008 | INFO     | [monitor] cgroup control has ended
[2025-10-12 01:47:49] 2025-10-12 05:47:44,535 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139717430327104)>', '<ExcThread(monitor, started 139716930287360)>']
[2025-10-12 01:47:49] 2025-10-12 05:47:44,652 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 01:47:49] 2025-10-12 05:47:44,652 | INFO     | [monitor] control thread has ended
[2025-10-12 01:47:49] 2025-10-12 05:47:49,558 | INFO     | all workflow threads have been joined
[2025-10-12 01:47:49] 2025-10-12 05:47:49,558 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 01:47:49] 2025-10-12 05:47:49,558 | INFO     | traces error code: 0
[2025-10-12 01:47:49] 2025-10-12 05:47:49,559 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 01:47:49] 2025-10-12 05:47:49,676 [wrapper] ==== pilot stdout END ====
[2025-10-12 01:47:49] 2025-10-12 05:47:49,678 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 01:47:49] 2025-10-12 05:47:49,681 [wrapper] pilotpid: 2868726
[2025-10-12 01:47:49] 2025-10-12 05:47:49,683 [wrapper] Pilot exit status: 0
[2025-10-12 01:47:49] 2025-10-12 05:47:49,691 [wrapper] pandaids: 6839221656
[2025-10-12 01:47:49] 2025-10-12 05:47:49,739 [wrapper] cleanup supervisor_pilot 3156237 2868727
[2025-10-12 01:47:49] 2025-10-12 05:47:49,741 [wrapper] Test setup, not cleaning
[2025-10-12 01:47:49] 2025-10-12 05:47:49,743 [wrapper] apfmon messages muted
[2025-10-12 01:47:49] 2025-10-12 05:47:49,745 [wrapper] ==== wrapper stdout END ====
[2025-10-12 01:47:49] 2025-10-12 05:47:49,746 [wrapper] ==== wrapper stderr END ====
[2025-10-12 01:47:49]  *** Error codes and diagnostics ***
[2025-10-12 01:47:49]     "exeErrorCode": 0,
[2025-10-12 01:47:49]     "exeErrorDiag": "",
[2025-10-12 01:47:49]     "pilotErrorCode": 0,
[2025-10-12 01:47:49]     "pilotErrorDiag": "",
[2025-10-12 01:47:49]  *** Listing of results directory ***
[2025-10-12 01:47:49] total 415044
[2025-10-12 01:47:49] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 21:26 pilot3.tar.gz
[2025-10-12 01:47:49] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 21:36 queuedata.json
[2025-10-12 01:47:49] -rwx------. 1 boincer umatlas     36292 Oct 11 21:37 runpilot2-wrapper.sh
[2025-10-12 01:47:49] -rw-r--r--. 1 boincer umatlas       100 Oct 12 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 01:47:49] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 00:02 run_atlas
[2025-10-12 01:47:49] -rw-r--r--. 1 boincer umatlas       105 Oct 12 00:02 job.xml
[2025-10-12 01:47:49] -rw-r--r--. 2 boincer umatlas 221084771 Oct 12 00:02 EVNT.46676267._003155.pool.root.1
[2025-10-12 01:47:49] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:02 start_atlas.sh
[2025-10-12 01:47:49] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 00:02 shared
[2025-10-12 01:47:49] -rw-r--r--. 2 boincer umatlas    569682 Oct 12 00:02 input.tar.gz
[2025-10-12 01:47:49] -rw-r--r--. 1 boincer umatlas         0 Oct 12 00:02 boinc_lockfile
[2025-10-12 01:47:49] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 00:02 pandaJob.out
[2025-10-12 01:47:49] -rw-------. 1 boincer umatlas    975512 Oct 12 00:02 agis_schedconf.cvmfs.json
[2025-10-12 01:47:49] -rw-------. 1 boincer umatlas   1560580 Oct 12 00:02 agis_ddmendpoints.agis.ALL.json
[2025-10-12 01:47:49] drwx------. 5 boincer umatlas      4096 Oct 12 00:02 pilot3
[2025-10-12 01:47:49] -rw-r--r--. 1 boincer umatlas      6660 Oct 12 01:45 init_data.xml
[2025-10-12 01:47:49] -rw-r--r--. 1 boincer umatlas       529 Oct 12 01:46 boinc_task_state.xml
[2025-10-12 01:47:49] -rw-------. 1 boincer umatlas 197476631 Oct 12 01:46 HITS.46676269._068668.pool.root.1
[2025-10-12 01:47:49] -rw-------. 1 boincer umatlas      1034 Oct 12 01:46 memory_monitor_summary.json
[2025-10-12 01:47:49] -rw-------. 1 boincer umatlas    356029 Oct 12 01:46 log.46676269._068668.job.log.tgz.1
[2025-10-12 01:47:49] -rw-------. 1 boincer umatlas      7810 Oct 12 01:47 heartbeat.json
[2025-10-12 01:47:49] -rw-------. 1 boincer umatlas        95 Oct 12 01:47 pilot_heartbeat.json
[2025-10-12 01:47:49] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 01:47 boinc_mmap_file
[2025-10-12 01:47:49] -rw-r--r--. 1 boincer umatlas        27 Oct 12 01:47 wrapper_checkpoint.txt
[2025-10-12 01:47:49] -rw-------. 1 boincer umatlas      4823 Oct 12 01:47 pilotlog.txt
[2025-10-12 01:47:49] -rw-------. 1 boincer umatlas    914256 Oct 12 01:47 log.46676269._068668.job.log.1
[2025-10-12 01:47:49] -rw-------. 1 boincer umatlas       357 Oct 12 01:47 output.list
[2025-10-12 01:47:49] -rw-r--r--. 1 boincer umatlas       620 Oct 12 01:47 runtime_log
[2025-10-12 01:47:49] -rw-------. 1 boincer umatlas   1290240 Oct 12 01:47 result.tar.gz
[2025-10-12 01:47:49] -rw-r--r--. 1 boincer umatlas      8693 Oct 12 01:47 runtime_log.err
[2025-10-12 01:47:49] -rw-------. 1 boincer umatlas       650 Oct 12 01:47 OPZLDmFD0R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm9EiNDm3NyyVo.diag
[2025-10-12 01:47:49] -rw-r--r--. 1 boincer umatlas     20897 Oct 12 01:47 stderr.txt
[2025-10-12 01:47:49] HITS file was successfully produced:
[2025-10-12 01:47:49] -rw-------. 1 boincer umatlas 197476631 Oct 12 01:46 shared/HITS.pool.root.1
[2025-10-12 01:47:49]  *** Contents of shared directory: ***
[2025-10-12 01:47:49] total 410596
[2025-10-12 01:47:49] -rw-r--r--. 2 boincer umatlas 221084771 Oct 12 00:02 ATLAS.root_0
[2025-10-12 01:47:49] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:02 start_atlas.sh
[2025-10-12 01:47:49] -rw-r--r--. 2 boincer umatlas    569682 Oct 12 00:02 input.tar.gz
[2025-10-12 01:47:49] -rw-------. 1 boincer umatlas 197476631 Oct 12 01:46 HITS.pool.root.1
[2025-10-12 01:47:49] -rw-------. 1 boincer umatlas   1290240 Oct 12 01:47 result.tar.gz
01:47:51 (2865028): run_atlas exited; CPU time 46228.862610
01:47:51 (2865028): called boinc_finish(0)

</stderr_txt>
]]>

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