Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:40 (2249521): wrapper (7.7.26015): starting
00:02:40 (2249521): wrapper: running run_atlas (--nthreads 9)
[2025-10-12 00:02:40] Arguments: --nthreads 9
[2025-10-12 00:02:40] Threads: 9
[2025-10-12 00:02:40] Checking for CVMFS
[2025-10-12 00:02:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 00:02:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 00:02:42] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 00:02:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 00:02:44] 2.13.2.0 1756961 93922 289344 151606 3 153 19669128 32935936 29680 16776704 0 100690650 99.690 82498709 29750 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 00:02:44] CVMFS is ok
[2025-10-12 00:02:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 00:02:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 00:02:44] Further information can be found at the LHC@home message board.
[2025-10-12 00:02:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 00:02:44] Checking for apptainer binary...
[2025-10-12 00:02:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 00:02:44] Running /usr/bin/apptainer --version
[2025-10-12 00:02:45] apptainer version 1.4.3-1.el9
[2025-10-12 00:02:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 00:02:46] c-5-5.aglt2.org
[2025-10-12 00:02:46] apptainer works
[2025-10-12 00:02:46] Set ATHENA_PROC_NUMBER=9
[2025-10-12 00:02:46] Set ATHENA_CORE_NUMBER=9
[2025-10-12 00:02:46] Starting ATLAS job with PandaID=6839241490
[2025-10-12 00:02:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 12:42:53]  *** The last 200 lines of the pilot log: ***
[2025-10-12 12:42:53] 2025-10-12 16:41:54,036 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 12:42:53] 2025-10-12 16:41:54,036 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 12:42:53] 2025-10-12 16:41:54,036 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 12:42:53] 2025-10-12 16:41:54,048 | INFO     | fitting pss+swap vs Time
[2025-10-12 12:42:53] 2025-10-12 16:41:54,049 | INFO     | sum of square deviations: 125640949729.05412
[2025-10-12 12:42:53] 2025-10-12 16:41:54,062 | INFO     | sum of deviations: 974482323582.5013
[2025-10-12 12:42:53] 2025-10-12 16:41:54,062 | INFO     | mean x: 1760264732.8783784
[2025-10-12 12:42:53] 2025-10-12 16:41:54,062 | INFO     | mean y: 2130537.05
[2025-10-12 12:42:53] 2025-10-12 16:41:54,062 | INFO     | -- intersect: -13650638490.204369
[2025-10-12 12:42:53] 2025-10-12 16:41:54,063 | INFO     | intersect: -13650638490.204369
[2025-10-12 12:42:53] 2025-10-12 16:41:54,064 | INFO     | chi2: 9.196935420795826
[2025-10-12 12:42:53] 2025-10-12 16:41:54,065 | INFO     | sum of square deviations: 123111363596.26399
[2025-10-12 12:42:53] 2025-10-12 16:41:54,077 | INFO     | sum of deviations: 1002126748432.9387
[2025-10-12 12:42:53] 2025-10-12 16:41:54,078 | INFO     | mean x: 1760264580.3863945
[2025-10-12 12:42:53] 2025-10-12 16:41:54,078 | INFO     | mean y: 2132189.6938775512
[2025-10-12 12:42:53] 2025-10-12 16:41:54,078 | INFO     | -- intersect: -14326425051.44954
[2025-10-12 12:42:53] 2025-10-12 16:41:54,078 | INFO     | intersect: -14326425051.44954
[2025-10-12 12:42:53] 2025-10-12 16:41:54,079 | INFO     | chi2: 8.53388472218717
[2025-10-12 12:42:53] 2025-10-12 16:41:54,079 | INFO     | current chi2=8.53388472218717 (change=7.209474333258744 %)
[2025-10-12 12:42:53] 2025-10-12 16:41:54,079 | INFO     | right removable region: 734
[2025-10-12 12:42:53] 2025-10-12 16:41:54,080 | INFO     | sum of square deviations: 123110831676.26387
[2025-10-12 12:42:53] 2025-10-12 16:41:54,092 | INFO     | sum of deviations: 762844842457.7297
[2025-10-12 12:42:53] 2025-10-12 16:41:54,093 | INFO     | mean x: 1760264885.3863945
[2025-10-12 12:42:53] 2025-10-12 16:41:54,093 | INFO     | mean y: 2143288.9129251703
[2025-10-12 12:42:53] 2025-10-12 16:41:54,093 | INFO     | -- intersect: -10905174701.656342
[2025-10-12 12:42:53] 2025-10-12 16:41:54,093 | INFO     | intersect: -10905174701.656342
[2025-10-12 12:42:53] 2025-10-12 16:41:54,094 | INFO     | chi2: 5.140347108962997
[2025-10-12 12:42:53] 2025-10-12 16:41:54,095 | INFO     | current chi2=5.140347108962997 (change=44.10804388883929 %)
[2025-10-12 12:42:53] 2025-10-12 16:41:54,095 | INFO     | sum of square deviations: 120614989372.45123
[2025-10-12 12:42:53] 2025-10-12 16:41:54,115 | INFO     | sum of deviations: 608100132354.244
[2025-10-12 12:42:53] 2025-10-12 16:41:54,115 | INFO     | mean x: 1760265037.8917809
[2025-10-12 12:42:53] 2025-10-12 16:41:54,115 | INFO     | mean y: 2152740.673972603
[2025-10-12 12:42:53] 2025-10-12 16:41:54,116 | INFO     | -- intersect: -8872510417.610285
[2025-10-12 12:42:53] 2025-10-12 16:41:54,116 | INFO     | intersect: -8872510417.610285
[2025-10-12 12:42:53] 2025-10-12 16:41:54,117 | INFO     | chi2: 3.1058020010218494
[2025-10-12 12:42:53] 2025-10-12 16:41:54,117 | INFO     | current chi2=3.1058020010218494 (change=39.57991678020344 %)
[2025-10-12 12:42:53] 2025-10-12 16:41:54,118 | INFO     | sum of square deviations: 118153057029.79922
[2025-10-12 12:42:53] 2025-10-12 16:41:54,129 | INFO     | sum of deviations: 515201413595.84204
[2025-10-12 12:42:53] 2025-10-12 16:41:54,129 | INFO     | mean x: 1760265190.3986206
[2025-10-12 12:42:53] 2025-10-12 16:41:54,129 | INFO     | mean y: 2158492.8413793105
[2025-10-12 12:42:53] 2025-10-12 16:41:54,129 | INFO     | -- intersect: -7673403504.409336
[2025-10-12 12:42:53] 2025-10-12 16:41:54,129 | INFO     | intersect: -7673403504.409336
[2025-10-12 12:42:53] 2025-10-12 16:41:54,130 | INFO     | chi2: 2.4158060073455947
[2025-10-12 12:42:53] 2025-10-12 16:41:54,130 | INFO     | current chi2=2.4158060073455947 (change=22.21635485614463 %)
[2025-10-12 12:42:53] 2025-10-12 16:41:54,130 | INFO     | left removable region: 30
[2025-10-12 12:42:53] 2025-10-12 16:41:54,131 | INFO     | sum of square deviations: 108179456476.88644
[2025-10-12 12:42:53] 2025-10-12 16:41:54,141 | INFO     | sum of deviations: 353044856970.3979
[2025-10-12 12:42:53] 2025-10-12 16:41:54,141 | INFO     | mean x: 1760265464.9147727
[2025-10-12 12:42:53] 2025-10-12 16:41:54,142 | INFO     | mean y: 2172390.9232954546
[2025-10-12 12:42:53] 2025-10-12 16:41:54,142 | INFO     | -- intersect: -5742473492.221312
[2025-10-12 12:42:53] 2025-10-12 16:41:54,142 | INFO     | intersect: -5742473492.221312
[2025-10-12 12:42:53] 2025-10-12 16:41:54,143 | INFO     | chi2: 0.7441024780196008
[2025-10-12 12:42:53] 2025-10-12 16:41:54,143 | INFO     | -- intersect: -5742473492.221312
[2025-10-12 12:42:53] 2025-10-12 16:41:54,143 | INFO     | current memory leak: 3.26 B/s (using 704 data points, chi2=0.74)
[2025-10-12 12:42:53] 2025-10-12 16:41:54,144 | INFO     | could have reported an average CPU frequency of 2601 MHz (28 samples)
[2025-10-12 12:42:53] 2025-10-12 16:41:54,144 | INFO     | ..............................
[2025-10-12 12:42:53] 2025-10-12 16:41:54,144 | INFO     | . Timing measurements:
[2025-10-12 12:42:53] 2025-10-12 16:41:54,144 | INFO     | . get job = 1 s
[2025-10-12 12:42:53] 2025-10-12 16:41:54,144 | INFO     | . initial setup = 14 s
[2025-10-12 12:42:53] 2025-10-12 16:41:54,144 | INFO     | . payload setup = 80 s
[2025-10-12 12:42:53] 2025-10-12 16:41:54,144 | INFO     | . stage-in = 1 s
[2025-10-12 12:42:53] 2025-10-12 16:41:54,144 | INFO     | . payload execution = 45157 s
[2025-10-12 12:42:53] 2025-10-12 16:41:54,144 | INFO     | . stage-out = 3 s
[2025-10-12 12:42:53] 2025-10-12 16:41:54,144 | INFO     | . log creation = 0 s
[2025-10-12 12:42:53] 2025-10-12 16:41:54,145 | INFO     | ..............................
[2025-10-12 12:42:53] 2025-10-12 16:41:54,738 | INFO     | 
[2025-10-12 12:42:53] 2025-10-12 16:41:54,738 | INFO     | job summary report
[2025-10-12 12:42:53] 2025-10-12 16:41:54,739 | INFO     | --------------------------------------------------
[2025-10-12 12:42:53] 2025-10-12 16:41:54,739 | INFO     | PanDA job id: 6839241490
[2025-10-12 12:42:53] 2025-10-12 16:41:54,739 | INFO     | task id: 46676269
[2025-10-12 12:42:53] 2025-10-12 16:41:54,739 | INFO     | errors: (none)
[2025-10-12 12:42:53] 2025-10-12 16:41:54,739 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 12:42:53] 2025-10-12 16:41:54,739 | INFO     | pilot state: finished 
[2025-10-12 12:42:53] 2025-10-12 16:41:54,739 | INFO     | transexitcode: 0
[2025-10-12 12:42:53] 2025-10-12 16:41:54,739 | INFO     | exeerrorcode: 0
[2025-10-12 12:42:53] 2025-10-12 16:41:54,739 | INFO     | exeerrordiag: 
[2025-10-12 12:42:53] 2025-10-12 16:41:54,739 | INFO     | exitcode: 0
[2025-10-12 12:42:53] 2025-10-12 16:41:54,740 | INFO     | exitmsg: OK
[2025-10-12 12:42:53] 2025-10-12 16:41:54,740 | INFO     | cpuconsumptiontime: 50711 s
[2025-10-12 12:42:53] 2025-10-12 16:41:54,740 | INFO     | nevents: 400
[2025-10-12 12:42:53] 2025-10-12 16:41:54,740 | INFO     | neventsw: 0
[2025-10-12 12:42:53] 2025-10-12 16:41:54,740 | INFO     | pid: 2279744
[2025-10-12 12:42:53] 2025-10-12 16:41:54,740 | INFO     | pgrp: 2279744
[2025-10-12 12:42:53] 2025-10-12 16:41:54,740 | INFO     | corecount: 9
[2025-10-12 12:42:53] 2025-10-12 16:41:54,740 | INFO     | event service: False
[2025-10-12 12:42:53] 2025-10-12 16:41:54,740 | INFO     | sizes: {0: 2347979, 1: 2348580, 3: 2348664, 4: 2348692, 5: 2348947, 6: 2348947, 18: 2349103, 30: 2349131, 41: 2349159, 53: 2349187, 66: 2349271, 69: 2349785, 78: 2
[2025-10-12 12:42:53] 2025-10-12 16:41:54,740 | INFO     | --------------------------------------------------
[2025-10-12 12:42:53] 2025-10-12 16:41:54,741 | INFO     | 
[2025-10-12 12:42:53] 2025-10-12 16:41:54,741 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-12 12:42:53] 2025-10-12 16:41:54,841 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 12:42:53] 2025-10-12 16:41:54,841 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 12:42:53] 2025-10-12 16:41:54,841 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 12:42:53] 2025-10-12 16:41:54,841 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 12:42:53] 2025-10-12 16:41:54,841 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 12:42:53] 2025-10-12 16:41:54,841 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 12:42:53] 2025-10-12 16:41:54,842 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 12:42:53] 2025-10-12 16:41:54,842 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 12:42:53] 2025-10-12 16:41:54,842 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 12:42:53] 2025-10-12 16:41:54,842 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 12:42:53] 2025-10-12 16:41:54,842 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 12:42:53] 2025-10-12 16:41:54,842 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 12:42:53] 2025-10-12 16:41:54,842 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 12:42:53] 2025-10-12 16:41:54,842 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 12:42:53] 2025-10-12 16:41:54,842 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 12:42:53] 2025-10-12 16:41:54,842 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 12:42:53] 2025-10-12 16:41:54,843 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 12:42:53] 2025-10-12 16:41:54,843 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 12:42:53] 2025-10-12 16:41:54,843 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 12:42:53] 2025-10-12 16:41:54,843 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 12:42:53] 2025-10-12 16:41:54,843 | INFO     | job 6839241490 has completed (purged errors)
[2025-10-12 12:42:53] 2025-10-12 16:41:54,843 | INFO     | overall cleanup function is called
[2025-10-12 12:42:53] 2025-10-12 16:41:55,861 | INFO     | --- collectZombieJob: --- 10, [2279744]
[2025-10-12 12:42:53] 2025-10-12 16:41:55,861 | INFO     | zombie collector waiting for pid 2279744
[2025-10-12 12:42:53] 2025-10-12 16:41:55,862 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 12:42:53] 2025-10-12 16:41:55,863 | INFO     | collected zombie processes
[2025-10-12 12:42:53] 2025-10-12 16:41:55,863 | INFO     | will attempt to kill all subprocesses of pid=2279744
[2025-10-12 12:42:53] 2025-10-12 16:41:56,350 | INFO     | process IDs to be killed: [2279744] (in reverse order)
[2025-10-12 12:42:53] 2025-10-12 16:41:56,485 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 12:42:53] 2025-10-12 16:41:56,485 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 12:42:53] 2025-10-12 16:41:56,508 | INFO     | did not find any defunct processes belonging to 2279744
[2025-10-12 12:42:53] 2025-10-12 16:41:56,533 | INFO     | did not find any defunct processes belonging to 2279744
[2025-10-12 12:42:53] 2025-10-12 16:41:56,533 | INFO     | ready for new job
[2025-10-12 12:42:53] 2025-10-12 16:41:56,533 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 12:42:53] 2025-10-12 16:41:56,537 | INFO     | ***************************************
[2025-10-12 12:42:53] 2025-10-12 16:41:56,537 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 12:42:53] 2025-10-12 16:41:56,537 | INFO     | ***************************************
[2025-10-12 12:42:53] 2025-10-12 16:41:56,538 | INFO     | 
[2025-10-12 12:42:53] 2025-10-12 16:41:56,553 | INFO     | architecture information:
[2025-10-12 12:42:53] 2025-10-12 16:41:56,563 | INFO     | executing command: cat /etc/os-release
[2025-10-12 12:42:53] 2025-10-12 16:41:56,638 | INFO     | cat /etc/os-release:
[2025-10-12 12:42:53] NAME="CentOS Linux"
[2025-10-12 12:42:53] VERSION="7 (Core)"
[2025-10-12 12:42:53] ID="centos"
[2025-10-12 12:42:53] ID_LIKE="rhel fedora"
[2025-10-12 12:42:53] VERSION_ID="7"
[2025-10-12 12:42:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 12:42:53] ANSI_COLOR="0;31"
[2025-10-12 12:42:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 12:42:53] HOME_URL="https://www.centos.org/"
[2025-10-12 12:42:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 12:42:53] 
[2025-10-12 12:42:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 12:42:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 12:42:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 12:42:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 12:42:53] 
[2025-10-12 12:42:53] 2025-10-12 16:41:56,638 | INFO     | ***************************************
[2025-10-12 12:42:53] 2025-10-12 16:41:57,141 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-12 12:42:53] 2025-10-12 16:41:57,217 | INFO     | sufficient remaining disk space (75687264256 B)
[2025-10-12 12:42:53] 2025-10-12 16:41:57,217 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 12:42:53] 2025-10-12 16:41:57,217 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 12:42:53] 2025-10-12 16:41:57,217 | INFO     | update_server=False
[2025-10-12 12:42:53] 2025-10-12 16:41:57,218 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 12:42:53] 2025-10-12 16:41:57,218 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 12:42:53] 2025-10-12 16:41:57,218 | INFO     | aborting loop
[2025-10-12 12:42:53] 2025-10-12 16:41:57,223 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 12:42:53] 2025-10-12 16:41:57,404 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 12:42:53] 2025-10-12 16:41:58,223 | INFO     | [job] retrieve thread has finished
[2025-10-12 12:42:53] 2025-10-12 16:41:58,224 | INFO     | [job] job monitor thread has finished
[2025-10-12 12:42:53] 2025-10-12 16:41:58,256 | INFO     | all data control threads have been joined
[2025-10-12 12:42:53] 2025-10-12 16:41:58,427 | INFO     | [payload] failed_post thread has finished
[2025-10-12 12:42:53] 2025-10-12 16:41:58,457 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 12:42:53] 2025-10-12 16:41:58,464 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 12:42:53] 2025-10-12 16:41:58,480 | INFO     | all payload control threads have been joined
[2025-10-12 12:42:53] 2025-10-12 16:41:58,573 | INFO     | all job control threads have been joined
[2025-10-12 12:42:53] 2025-10-12 16:41:58,843 | INFO     | [payload] validate_post thread has finished
[2025-10-12 12:42:53] 2025-10-12 16:41:59,255 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 12:42:53] 2025-10-12 16:41:59,262 | INFO     | [data] control thread has finished
[2025-10-12 12:42:53] 2025-10-12 16:41:59,415 | INFO     | [data] copytool_out thread has finished
[2025-10-12 12:42:53] 2025-10-12 16:41:59,485 | INFO     | [payload] control thread has finished
[2025-10-12 12:42:53] 2025-10-12 16:41:59,508 | INFO     | [data] copytool_in thread has finished
[2025-10-12 12:42:53] 2025-10-12 16:41:59,515 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 12:42:53] 2025-10-12 16:41:59,519 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 12:42:53] 2025-10-12 16:41:59,566 | INFO     | [job] validate thread has finished
[2025-10-12 12:42:53] 2025-10-12 16:41:59,579 | INFO     | [job] control thread has finished
[2025-10-12 12:42:53] 2025-10-12 16:42:00,260 | INFO     | [job] queue monitor thread has finished
[2025-10-12 12:42:53] 2025-10-12 16:42:01,237 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 12:42:53] 2025-10-12 16:42:27,331 | INFO     | PID=2257924 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 12:42:53] 2025-10-12 16:42:27,331 | INFO     | .. there are 41 such processes running
[2025-10-12 12:42:53] 2025-10-12 16:42:27,331 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 12:42:53] 2025-10-12 16:42:27,331 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 12:42:53] 2025-10-12 16:42:27,331 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 12:42:53] 2025-10-12 16:42:46,523 | INFO     | [monitor] cgroup control has ended
[2025-10-12 12:42:53] 2025-10-12 16:42:47,350 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140600669062976)>', '<ExcThread(monitor, started 140600015828736)>']
[2025-10-12 12:42:53] 2025-10-12 16:42:47,470 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 12:42:53] 2025-10-12 16:42:47,471 | INFO     | [monitor] control thread has ended
[2025-10-12 12:42:53] 2025-10-12 16:42:52,387 | INFO     | all workflow threads have been joined
[2025-10-12 12:42:53] 2025-10-12 16:42:52,388 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 12:42:53] 2025-10-12 16:42:52,388 | INFO     | traces error code: 0
[2025-10-12 12:42:53] 2025-10-12 16:42:52,388 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 12:42:53] 2025-10-12 16:42:52,848 [wrapper] ==== pilot stdout END ====
[2025-10-12 12:42:53] 2025-10-12 16:42:52,866 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 12:42:53] 2025-10-12 16:42:52,907 [wrapper] pilotpid: 2257924
[2025-10-12 12:42:53] 2025-10-12 16:42:52,929 [wrapper] Pilot exit status: 0
[2025-10-12 12:42:53] 2025-10-12 16:42:52,963 [wrapper] pandaids: 6839241490
[2025-10-12 12:42:53] 2025-10-12 16:42:53,072 [wrapper] cleanup supervisor_pilot  261870 2257925
[2025-10-12 12:42:53] 2025-10-12 16:42:53,087 [wrapper] Test setup, not cleaning
[2025-10-12 12:42:53] 2025-10-12 16:42:53,100 [wrapper] apfmon messages muted
[2025-10-12 12:42:53] 2025-10-12 16:42:53,105 [wrapper] ==== wrapper stdout END ====
[2025-10-12 12:42:53] 2025-10-12 16:42:53,110 [wrapper] ==== wrapper stderr END ====
[2025-10-12 12:42:53]  *** Error codes and diagnostics ***
[2025-10-12 12:42:53]     "exeErrorCode": 0,
[2025-10-12 12:42:53]     "exeErrorDiag": "",
[2025-10-12 12:42:53]     "pilotErrorCode": 0,
[2025-10-12 12:42:53]     "pilotErrorDiag": "",
[2025-10-12 12:42:53]  *** Listing of results directory ***
[2025-10-12 12:42:53] total 418880
[2025-10-12 12:42:53] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 21:26 pilot3.tar.gz
[2025-10-12 12:42:53] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 21:36 queuedata.json
[2025-10-12 12:42:53] -rwx------. 1 boincer umatlas     36292 Oct 11 21:37 runpilot2-wrapper.sh
[2025-10-12 12:42:53] -rw-r--r--. 1 boincer umatlas       100 Oct 12 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 12:42:53] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 00:02 run_atlas
[2025-10-12 12:42:53] -rw-r--r--. 1 boincer umatlas       105 Oct 12 00:02 job.xml
[2025-10-12 12:42:53] -rw-r--r--. 2 boincer umatlas 221321901 Oct 12 00:02 EVNT.46676267._001199.pool.root.1
[2025-10-12 12:42:53] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:02 start_atlas.sh
[2025-10-12 12:42:53] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 00:02 shared
[2025-10-12 12:42:53] -rw-r--r--. 2 boincer umatlas    569687 Oct 12 00:02 input.tar.gz
[2025-10-12 12:42:53] -rw-r--r--. 1 boincer umatlas         0 Oct 12 00:02 boinc_lockfile
[2025-10-12 12:42:53] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 00:02 pandaJob.out
[2025-10-12 12:42:53] -rw-------. 1 boincer umatlas    975512 Oct 12 00:04 agis_schedconf.cvmfs.json
[2025-10-12 12:42:53] drwx------. 5 boincer umatlas      4096 Oct 12 00:05 pilot3
[2025-10-12 12:42:53] -rw-r--r--. 1 boincer umatlas      6658 Oct 12 12:40 init_data.xml
[2025-10-12 12:42:53] -rw-------. 1 boincer umatlas 192277520 Oct 12 12:40 HITS.46676269._068719.pool.root.1
[2025-10-12 12:42:53] -rw-r--r--. 1 boincer umatlas       531 Oct 12 12:40 boinc_task_state.xml
[2025-10-12 12:42:53] -rw-------. 1 boincer umatlas      1054 Oct 12 12:41 memory_monitor_summary.json
[2025-10-12 12:42:53] -rw-------. 1 boincer umatlas        95 Oct 12 12:41 pilot_heartbeat.json
[2025-10-12 12:42:53] -rw-------. 1 boincer umatlas   1560580 Oct 12 12:41 agis_ddmendpoints.agis.ALL.json
[2025-10-12 12:42:53] -rw-------. 1 boincer umatlas    827527 Oct 12 12:41 log.46676269._068719.job.log.tgz.1
[2025-10-12 12:42:53] -rw-------. 1 boincer umatlas      7847 Oct 12 12:41 heartbeat.json
[2025-10-12 12:42:53] -rw-------. 1 boincer umatlas      4824 Oct 12 12:42 pilotlog.txt
[2025-10-12 12:42:53] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 12:42 boinc_mmap_file
[2025-10-12 12:42:53] -rw-r--r--. 1 boincer umatlas        28 Oct 12 12:42 wrapper_checkpoint.txt
[2025-10-12 12:42:53] -rw-------. 1 boincer umatlas   4882802 Oct 12 12:42 log.46676269._068719.job.log.1
[2025-10-12 12:42:53] -rw-------. 1 boincer umatlas       357 Oct 12 12:42 output.list
[2025-10-12 12:42:53] -rw-r--r--. 1 boincer umatlas       620 Oct 12 12:42 runtime_log
[2025-10-12 12:42:53] -rw-------. 1 boincer umatlas   5734400 Oct 12 12:42 result.tar.gz
[2025-10-12 12:42:53] -rw-r--r--. 1 boincer umatlas      8689 Oct 12 12:42 runtime_log.err
[2025-10-12 12:42:53] -rw-------. 1 boincer umatlas       657 Oct 12 12:42 08RKDmzC0R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm0EiNDmfa5KVm.diag
[2025-10-12 12:42:53] -rw-r--r--. 1 boincer umatlas     21020 Oct 12 12:42 stderr.txt
[2025-10-12 12:42:53] HITS file was successfully produced:
[2025-10-12 12:42:53] -rw-------. 1 boincer umatlas 192277520 Oct 12 12:40 shared/HITS.pool.root.1
[2025-10-12 12:42:53]  *** Contents of shared directory: ***
[2025-10-12 12:42:53] total 410092
[2025-10-12 12:42:53] -rw-r--r--. 2 boincer umatlas 221321901 Oct 12 00:02 ATLAS.root_0
[2025-10-12 12:42:53] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:02 start_atlas.sh
[2025-10-12 12:42:53] -rw-r--r--. 2 boincer umatlas    569687 Oct 12 00:02 input.tar.gz
[2025-10-12 12:42:53] -rw-------. 1 boincer umatlas 192277520 Oct 12 12:40 HITS.pool.root.1
[2025-10-12 12:42:53] -rw-------. 1 boincer umatlas   5734400 Oct 12 12:42 result.tar.gz
12:42:54 (2249521): run_atlas exited; CPU time 52513.849576
12:42:54 (2249521): called boinc_finish(0)

</stderr_txt>
]]>

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