Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:11:03 (942755): wrapper (7.7.26015): starting
14:11:03 (942755): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 14:11:03] Arguments: --nthreads 8
[2025-10-12 14:11:03] Threads: 8
[2025-10-12 14:11:03] Checking for CVMFS
[2025-10-12 14:11:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 14:11:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 14:11:03] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 14:11:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 14:11:04] 2.13.2.0 239285 129605 231508 151631 0 237 30938267 32935937 26314 16776704 0 93113439 99.676 84737640 30397 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 14:11:04] CVMFS is ok
[2025-10-12 14:11:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 14:11:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 14:11:04] Further information can be found at the LHC@home message board.
[2025-10-12 14:11:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 14:11:04] Checking for apptainer binary...
[2025-10-12 14:11:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 14:11:04] Running /usr/bin/apptainer --version
[2025-10-12 14:11:04] apptainer version 1.4.3-1.el9
[2025-10-12 14:11:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 14:11:04] c-6-6.aglt2.org
[2025-10-12 14:11:04] apptainer works
[2025-10-12 14:11:04] Set ATHENA_PROC_NUMBER=8
[2025-10-12 14:11:04] Set ATHENA_CORE_NUMBER=8
[2025-10-12 14:11:04] Starting ATLAS job with PandaID=6839221608
[2025-10-12 14:11:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 17:45:57]  *** The last 200 lines of the pilot log: ***
[2025-10-12 17:45:57] 2025-10-12 21:44:51,871 | INFO     | time since job start (12804s) is within the limit (172800.0s)
[2025-10-12 17:45:57] 2025-10-12 21:44:52,907 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 17:45:57] 2025-10-12 21:44:52,914 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.1479750000008
[2025-10-12 17:45:57] 2025-10-12 21:44:52,921 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6839221608/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 17:45:57] 2025-10-12 21:44:52,922 | INFO     | extracted standard info from prmon json
[2025-10-12 17:45:57] 2025-10-12 21:44:52,922 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 17:45:57] 2025-10-12 21:44:52,922 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 17:45:57] 2025-10-12 21:44:52,922 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 17:45:57] 2025-10-12 21:44:52,923 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 17:45:57] 2025-10-12 21:44:52,927 | INFO     | fitting pss+swap vs Time
[2025-10-12 17:45:57] 2025-10-12 21:44:52,927 | INFO     | sum of square deviations: 2831050431.062221
[2025-10-12 17:45:57] 2025-10-12 21:44:52,929 | INFO     | sum of deviations: -26473725248.909096
[2025-10-12 17:45:57] 2025-10-12 21:44:52,929 | INFO     | mean x: 1760299076.2488039
[2025-10-12 17:45:57] 2025-10-12 21:44:52,929 | INFO     | mean y: 2237611.3636363638
[2025-10-12 17:45:57] 2025-10-12 21:44:52,930 | INFO     | -- intersect: 16463150348.631332
[2025-10-12 17:45:57] 2025-10-12 21:44:52,930 | INFO     | intersect: 16463150348.631332
[2025-10-12 17:45:57] 2025-10-12 21:44:52,930 | INFO     | chi2: 2.1185516477836748
[2025-10-12 17:45:57] 2025-10-12 21:44:52,931 | INFO     | sum of square deviations: 2632693008.7451043
[2025-10-12 17:45:57] 2025-10-12 21:44:52,932 | INFO     | sum of deviations: -23679562973.21569
[2025-10-12 17:45:57] 2025-10-12 21:44:52,933 | INFO     | mean x: 1760298923.745098
[2025-10-12 17:45:57] 2025-10-12 21:44:52,933 | INFO     | mean y: 2239765.7843137253
[2025-10-12 17:45:57] 2025-10-12 21:44:52,933 | INFO     | -- intersect: 15835118524.547935
[2025-10-12 17:45:57] 2025-10-12 21:44:52,933 | INFO     | intersect: 15835118524.547935
[2025-10-12 17:45:57] 2025-10-12 21:44:52,933 | INFO     | chi2: 2.1194702940633467
[2025-10-12 17:45:57] 2025-10-12 21:44:52,933 | INFO     | current chi2=2.1194702940633467 (change=-0.04336199594817611 %)
[2025-10-12 17:45:57] 2025-10-12 21:44:52,934 | INFO     | right removable region: 203
[2025-10-12 17:45:57] 2025-10-12 21:44:52,934 | INFO     | sum of square deviations: 2632686665.7451043
[2025-10-12 17:45:57] 2025-10-12 21:44:52,936 | INFO     | sum of deviations: -58477311766.39221
[2025-10-12 17:45:57] 2025-10-12 21:44:52,936 | INFO     | mean x: 1760299228.754902
[2025-10-12 17:45:57] 2025-10-12 21:44:52,936 | INFO     | mean y: 2262012.8921568627
[2025-10-12 17:45:57] 2025-10-12 21:44:52,936 | INFO     | -- intersect: 39102078995.064896
[2025-10-12 17:45:57] 2025-10-12 21:44:52,936 | INFO     | intersect: 39102078995.064896
[2025-10-12 17:45:57] 2025-10-12 21:44:52,937 | INFO     | chi2: 0.48184644681630073
[2025-10-12 17:45:57] 2025-10-12 21:44:52,937 | INFO     | current chi2=0.48184644681630073 (change=77.25585555960436 %)
[2025-10-12 17:45:57] 2025-10-12 21:44:52,937 | INFO     | sum of square deviations: 2443811450.41207
[2025-10-12 17:45:57] 2025-10-12 21:44:52,939 | INFO     | sum of deviations: -54222080424.56786
[2025-10-12 17:45:57] 2025-10-12 21:44:52,939 | INFO     | mean x: 1760299381.2613065
[2025-10-12 17:45:57] 2025-10-12 21:44:52,939 | INFO     | mean y: 2258529.030150754
[2025-10-12 17:45:57] 2025-10-12 21:44:52,939 | INFO     | -- intersect: 39058911040.406815
[2025-10-12 17:45:57] 2025-10-12 21:44:52,939 | INFO     | intersect: 39058911040.406815
[2025-10-12 17:45:57] 2025-10-12 21:44:52,940 | INFO     | chi2: 0.45894656661051203
[2025-10-12 17:45:57] 2025-10-12 21:44:52,940 | INFO     | current chi2=0.45894656661051203 (change=4.752526527298241 %)
[2025-10-12 17:45:57] 2025-10-12 21:44:52,940 | INFO     | left removable region: 20
[2025-10-12 17:45:57] 2025-10-12 21:44:52,940 | INFO     | sum of square deviations: 1900468709.8797805
[2025-10-12 17:45:57] 2025-10-12 21:44:52,942 | INFO     | sum of deviations: -32026757351.153023
[2025-10-12 17:45:57] 2025-10-12 21:44:52,942 | INFO     | mean x: 1760299503.2677596
[2025-10-12 17:45:57] 2025-10-12 21:44:52,942 | INFO     | mean y: 2244530.431693989
[2025-10-12 17:45:57] 2025-10-12 21:44:52,942 | INFO     | -- intersect: 29666866085.857357
[2025-10-12 17:45:57] 2025-10-12 21:44:52,942 | INFO     | intersect: 29666866085.857357
[2025-10-12 17:45:57] 2025-10-12 21:44:52,943 | INFO     | chi2: 0.38249139924446
[2025-10-12 17:45:57] 2025-10-12 21:44:52,943 | INFO     | -- intersect: 29666866085.857357
[2025-10-12 17:45:57] 2025-10-12 21:44:52,943 | INFO     | current memory leak: -16.85 B/s (using 183 data points, chi2=0.38)
[2025-10-12 17:45:57] 2025-10-12 21:44:52,944 | INFO     | could have reported an average CPU frequency of 2603 MHz (11 samples)
[2025-10-12 17:45:57] 2025-10-12 21:44:52,944 | INFO     | ..............................
[2025-10-12 17:45:57] 2025-10-12 21:44:52,944 | INFO     | . Timing measurements:
[2025-10-12 17:45:57] 2025-10-12 21:44:52,944 | INFO     | . get job = 0 s
[2025-10-12 17:45:57] 2025-10-12 21:44:52,944 | INFO     | . initial setup = 3 s
[2025-10-12 17:45:57] 2025-10-12 21:44:52,944 | INFO     | . payload setup = 13 s
[2025-10-12 17:45:57] 2025-10-12 21:44:52,945 | INFO     | . stage-in = 0 s
[2025-10-12 17:45:57] 2025-10-12 21:44:52,945 | INFO     | . payload execution = 12747 s
[2025-10-12 17:45:57] 2025-10-12 21:44:52,945 | INFO     | . stage-out = 3 s
[2025-10-12 17:45:57] 2025-10-12 21:44:52,945 | INFO     | . log creation = 0 s
[2025-10-12 17:45:57] 2025-10-12 21:44:52,945 | INFO     | ..............................
[2025-10-12 17:45:57] 2025-10-12 21:44:53,241 | INFO     | 
[2025-10-12 17:45:57] 2025-10-12 21:44:53,241 | INFO     | job summary report
[2025-10-12 17:45:57] 2025-10-12 21:44:53,241 | INFO     | --------------------------------------------------
[2025-10-12 17:45:57] 2025-10-12 21:44:53,241 | INFO     | PanDA job id: 6839221608
[2025-10-12 17:45:57] 2025-10-12 21:44:53,241 | INFO     | task id: 46676269
[2025-10-12 17:45:57] 2025-10-12 21:44:53,244 | INFO     | errors: (none)
[2025-10-12 17:45:57] 2025-10-12 21:44:53,245 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 17:45:57] 2025-10-12 21:44:53,245 | INFO     | pilot state: finished 
[2025-10-12 17:45:57] 2025-10-12 21:44:53,245 | INFO     | transexitcode: 0
[2025-10-12 17:45:57] 2025-10-12 21:44:53,245 | INFO     | exeerrorcode: 0
[2025-10-12 17:45:57] 2025-10-12 21:44:53,246 | INFO     | exeerrordiag: 
[2025-10-12 17:45:57] 2025-10-12 21:44:53,246 | INFO     | exitcode: 0
[2025-10-12 17:45:57] 2025-10-12 21:44:53,246 | INFO     | exitmsg: OK
[2025-10-12 17:45:57] 2025-10-12 21:44:53,246 | INFO     | cpuconsumptiontime: 51395 s
[2025-10-12 17:45:57] 2025-10-12 21:44:53,246 | INFO     | nevents: 400
[2025-10-12 17:45:57] 2025-10-12 21:44:53,246 | INFO     | neventsw: 0
[2025-10-12 17:45:57] 2025-10-12 21:44:53,246 | INFO     | pid: 954907
[2025-10-12 17:45:57] 2025-10-12 21:44:53,246 | INFO     | pgrp: 954907
[2025-10-12 17:45:57] 2025-10-12 21:44:53,246 | INFO     | corecount: 8
[2025-10-12 17:45:57] 2025-10-12 21:44:53,247 | INFO     | event service: False
[2025-10-12 17:45:57] 2025-10-12 21:44:53,247 | INFO     | sizes: {0: 2348686, 1: 2348885, 9: 2349147, 12: 2349175, 12764: 2379263, 12767: 2388261, 12771: 2388473, 12782: 2388667}
[2025-10-12 17:45:57] 2025-10-12 21:44:53,247 | INFO     | --------------------------------------------------
[2025-10-12 17:45:57] 2025-10-12 21:44:53,247 | INFO     | 
[2025-10-12 17:45:57] 2025-10-12 21:44:53,247 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 17:45:57] 2025-10-12 21:44:53,270 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 17:45:57] 2025-10-12 21:44:53,270 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 17:45:57] 2025-10-12 21:44:53,270 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 17:45:57] 2025-10-12 21:44:53,271 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 17:45:57] 2025-10-12 21:44:53,271 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 17:45:57] 2025-10-12 21:44:53,271 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 17:45:57] 2025-10-12 21:44:53,271 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 17:45:57] 2025-10-12 21:44:53,271 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 17:45:57] 2025-10-12 21:44:53,271 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 17:45:57] 2025-10-12 21:44:53,271 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 17:45:57] 2025-10-12 21:44:53,271 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 17:45:57] 2025-10-12 21:44:53,271 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 17:45:57] 2025-10-12 21:44:53,272 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 17:45:57] 2025-10-12 21:44:53,272 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 17:45:57] 2025-10-12 21:44:53,272 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 17:45:57] 2025-10-12 21:44:53,272 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 17:45:57] 2025-10-12 21:44:53,272 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 17:45:57] 2025-10-12 21:44:53,272 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 17:45:57] 2025-10-12 21:44:53,272 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 17:45:57] 2025-10-12 21:44:53,272 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 17:45:57] 2025-10-12 21:44:53,273 | INFO     | job 6839221608 has completed (purged errors)
[2025-10-12 17:45:57] 2025-10-12 21:44:53,273 | INFO     | overall cleanup function is called
[2025-10-12 17:45:57] 2025-10-12 21:44:54,285 | INFO     | --- collectZombieJob: --- 10, [954907]
[2025-10-12 17:45:57] 2025-10-12 21:44:54,286 | INFO     | zombie collector waiting for pid 954907
[2025-10-12 17:45:57] 2025-10-12 21:44:54,286 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 17:45:57] 2025-10-12 21:44:54,286 | INFO     | collected zombie processes
[2025-10-12 17:45:57] 2025-10-12 21:44:54,286 | INFO     | will attempt to kill all subprocesses of pid=954907
[2025-10-12 17:45:57] 2025-10-12 21:44:54,932 | INFO     | process IDs to be killed: [954907] (in reverse order)
[2025-10-12 17:45:57] 2025-10-12 21:44:55,076 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 17:45:57] 2025-10-12 21:44:55,077 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 17:45:57] 2025-10-12 21:44:55,089 | INFO     | did not find any defunct processes belonging to 954907
[2025-10-12 17:45:57] 2025-10-12 21:44:55,102 | INFO     | did not find any defunct processes belonging to 954907
[2025-10-12 17:45:57] 2025-10-12 21:44:55,103 | INFO     | ready for new job
[2025-10-12 17:45:57] 2025-10-12 21:44:55,103 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 17:45:57] 2025-10-12 21:44:55,105 | INFO     | ***************************************
[2025-10-12 17:45:57] 2025-10-12 21:44:55,105 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 17:45:57] 2025-10-12 21:44:55,105 | INFO     | ***************************************
[2025-10-12 17:45:57] 2025-10-12 21:44:55,106 | INFO     | 
[2025-10-12 17:45:57] 2025-10-12 21:44:55,120 | INFO     | architecture information:
[2025-10-12 17:45:57] 2025-10-12 21:44:55,127 | INFO     | executing command: cat /etc/os-release
[2025-10-12 17:45:57] 2025-10-12 21:44:55,148 | INFO     | cat /etc/os-release:
[2025-10-12 17:45:57] NAME="CentOS Linux"
[2025-10-12 17:45:57] VERSION="7 (Core)"
[2025-10-12 17:45:57] ID="centos"
[2025-10-12 17:45:57] ID_LIKE="rhel fedora"
[2025-10-12 17:45:57] VERSION_ID="7"
[2025-10-12 17:45:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 17:45:57] ANSI_COLOR="0;31"
[2025-10-12 17:45:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 17:45:57] HOME_URL="https://www.centos.org/"
[2025-10-12 17:45:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 17:45:57] 
[2025-10-12 17:45:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 17:45:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 17:45:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 17:45:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 17:45:57] 
[2025-10-12 17:45:57] 2025-10-12 21:44:55,148 | INFO     | ***************************************
[2025-10-12 17:45:57] 2025-10-12 21:44:55,652 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 17:45:57] 2025-10-12 21:44:55,675 | INFO     | sufficient remaining disk space (75843502080 B)
[2025-10-12 17:45:57] 2025-10-12 21:44:55,675 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 17:45:57] 2025-10-12 21:44:55,675 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 17:45:57] 2025-10-12 21:44:55,676 | INFO     | update_server=False
[2025-10-12 17:45:57] 2025-10-12 21:44:55,676 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 17:45:57] 2025-10-12 21:44:56,050 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 17:45:57] 2025-10-12 21:44:56,051 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 17:45:57] 2025-10-12 21:44:56,051 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 17:45:57] 2025-10-12 21:44:56,051 | INFO     | will abort loop
[2025-10-12 17:45:57] 2025-10-12 21:44:56,330 | INFO     | all data control threads have been joined
[2025-10-12 17:45:57] 2025-10-12 21:44:56,682 | INFO     | [job] retrieve thread has finished
[2025-10-12 17:45:57] 2025-10-12 21:44:56,755 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 17:45:57] 2025-10-12 21:44:56,772 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 17:45:57] 2025-10-12 21:44:56,850 | INFO     | all payload control threads have been joined
[2025-10-12 17:45:57] 2025-10-12 21:44:56,901 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 17:45:57] 2025-10-12 21:44:57,051 | INFO     | all job control threads have been joined
[2025-10-12 17:45:57] 2025-10-12 21:44:57,058 | INFO     | [job] job monitor thread has finished
[2025-10-12 17:45:57] 2025-10-12 21:44:57,147 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 17:45:57] 2025-10-12 21:44:57,336 | INFO     | [data] control thread has finished
[2025-10-12 17:45:57] 2025-10-12 21:44:57,399 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 17:45:57] 2025-10-12 21:44:57,447 | INFO     | [payload] validate_post thread has finished
[2025-10-12 17:45:57] 2025-10-12 21:44:57,509 | INFO     | [job] validate thread has finished
[2025-10-12 17:45:57] 2025-10-12 21:44:57,779 | INFO     | [payload] failed_post thread has finished
[2025-10-12 17:45:57] 2025-10-12 21:44:57,857 | INFO     | [payload] control thread has finished
[2025-10-12 17:45:57] 2025-10-12 21:44:57,944 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 17:45:57] 2025-10-12 21:44:58,056 | INFO     | [job] control thread has finished
[2025-10-12 17:45:57] 2025-10-12 21:44:58,074 | INFO     | [data] copytool_in thread has finished
[2025-10-12 17:45:57] 2025-10-12 21:44:58,080 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 17:45:57] 2025-10-12 21:44:58,763 | INFO     | [data] copytool_out thread has finished
[2025-10-12 17:45:57] 2025-10-12 21:44:59,087 | INFO     | [job] queue monitor thread has finished
[2025-10-12 17:45:57] 2025-10-12 21:45:01,409 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 17:45:57] 2025-10-12 21:45:25,528 | INFO     | PID=946511 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 17:45:57] 2025-10-12 21:45:25,530 | INFO     | .. there are 28 such processes running
[2025-10-12 17:45:57] 2025-10-12 21:45:25,530 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 17:45:57] 2025-10-12 21:45:25,531 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 17:45:57] 2025-10-12 21:45:25,531 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 17:45:57] 2025-10-12 21:45:50,326 | INFO     | [monitor] cgroup control has ended
[2025-10-12 17:45:57] 2025-10-12 21:45:51,938 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140071939675968)>', '<ExcThread(monitor, started 140071046977280)>']
[2025-10-12 17:45:57] 2025-10-12 21:45:52,700 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 17:45:57] 2025-10-12 21:45:52,701 | INFO     | [monitor] control thread has ended
[2025-10-12 17:45:57] 2025-10-12 21:45:56,969 | INFO     | all workflow threads have been joined
[2025-10-12 17:45:57] 2025-10-12 21:45:56,970 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 17:45:57] 2025-10-12 21:45:56,970 | INFO     | traces error code: 0
[2025-10-12 17:45:57] 2025-10-12 21:45:56,970 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 17:45:57] 2025-10-12 21:45:57,184 [wrapper] ==== pilot stdout END ====
[2025-10-12 17:45:57] 2025-10-12 21:45:57,187 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 17:45:57] 2025-10-12 21:45:57,190 [wrapper] pilotpid: 946511
[2025-10-12 17:45:57] 2025-10-12 21:45:57,194 [wrapper] Pilot exit status: 0
[2025-10-12 17:45:57] 2025-10-12 21:45:57,281 [wrapper] pandaids: 6839221608
[2025-10-12 17:45:57] 2025-10-12 21:45:57,406 [wrapper] cleanup supervisor_pilot 1559863 946512
[2025-10-12 17:45:57] 2025-10-12 21:45:57,409 [wrapper] Test setup, not cleaning
[2025-10-12 17:45:57] 2025-10-12 21:45:57,412 [wrapper] apfmon messages muted
[2025-10-12 17:45:57] 2025-10-12 21:45:57,415 [wrapper] ==== wrapper stdout END ====
[2025-10-12 17:45:57] 2025-10-12 21:45:57,418 [wrapper] ==== wrapper stderr END ====
[2025-10-12 17:45:57]  *** Error codes and diagnostics ***
[2025-10-12 17:45:57]     "exeErrorCode": 0,
[2025-10-12 17:45:57]     "exeErrorDiag": "",
[2025-10-12 17:45:57]     "pilotErrorCode": 0,
[2025-10-12 17:45:57]     "pilotErrorDiag": "",
[2025-10-12 17:45:57]  *** Listing of results directory ***
[2025-10-12 17:45:57] total 416964
[2025-10-12 17:45:57] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 21:26 pilot3.tar.gz
[2025-10-12 17:45:57] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 21:32 queuedata.json
[2025-10-12 17:45:57] -rwx------. 1 boincer umatlas     36292 Oct 11 21:33 runpilot2-wrapper.sh
[2025-10-12 17:45:57] -rw-r--r--. 1 boincer umatlas       100 Oct 12 14:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 17:45:57] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 14:11 run_atlas
[2025-10-12 17:45:57] -rw-r--r--. 1 boincer umatlas       105 Oct 12 14:11 job.xml
[2025-10-12 17:45:57] -rw-r--r--. 2 boincer umatlas 219569527 Oct 12 14:11 EVNT.46676267._003153.pool.root.1
[2025-10-12 17:45:57] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 14:11 shared
[2025-10-12 17:45:57] -rw-r--r--. 2 boincer umatlas    569680 Oct 12 14:11 input.tar.gz
[2025-10-12 17:45:57] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 14:11 start_atlas.sh
[2025-10-12 17:45:57] -rw-r--r--. 1 boincer umatlas         0 Oct 12 14:11 boinc_lockfile
[2025-10-12 17:45:57] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 14:11 pandaJob.out
[2025-10-12 17:45:57] -rw-------. 1 boincer umatlas    975528 Oct 12 14:11 agis_schedconf.cvmfs.json
[2025-10-12 17:45:57] drwx------. 5 boincer umatlas      4096 Oct 12 14:11 pilot3
[2025-10-12 17:45:57] -rw-r--r--. 1 boincer umatlas      6659 Oct 12 17:38 init_data.xml
[2025-10-12 17:45:57] -rw-------. 1 boincer umatlas 199164533 Oct 12 17:43 HITS.46676269._068620.pool.root.1
[2025-10-12 17:45:57] -rw-r--r--. 1 boincer umatlas       530 Oct 12 17:44 boinc_task_state.xml
[2025-10-12 17:45:57] -rw-------. 1 boincer umatlas      1041 Oct 12 17:44 memory_monitor_summary.json
[2025-10-12 17:45:57] -rw-------. 1 boincer umatlas   1560580 Oct 12 17:44 agis_ddmendpoints.agis.ALL.json
[2025-10-12 17:45:57] -rw-------. 1 boincer umatlas    451075 Oct 12 17:44 log.46676269._068620.job.log.tgz.1
[2025-10-12 17:45:57] -rw-------. 1 boincer umatlas        95 Oct 12 17:44 pilot_heartbeat.json
[2025-10-12 17:45:57] -rw-------. 1 boincer umatlas      7824 Oct 12 17:44 heartbeat.json
[2025-10-12 17:45:57] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 17:45 boinc_mmap_file
[2025-10-12 17:45:57] -rw-r--r--. 1 boincer umatlas        28 Oct 12 17:45 wrapper_checkpoint.txt
[2025-10-12 17:45:57] -rw-------. 1 boincer umatlas      5009 Oct 12 17:45 pilotlog.txt
[2025-10-12 17:45:57] -rw-------. 1 boincer umatlas   1714619 Oct 12 17:45 log.46676269._068620.job.log.1
[2025-10-12 17:45:57] -rw-------. 1 boincer umatlas       357 Oct 12 17:45 output.list
[2025-10-12 17:45:57] -rw-r--r--. 1 boincer umatlas       620 Oct 12 17:45 runtime_log
[2025-10-12 17:45:57] -rw-------. 1 boincer umatlas   2181120 Oct 12 17:45 result.tar.gz
[2025-10-12 17:45:57] -rw-r--r--. 1 boincer umatlas      8689 Oct 12 17:45 runtime_log.err
[2025-10-12 17:45:57] -rw-------. 1 boincer umatlas       653 Oct 12 17:45 NL9MDmB9zR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmHEiNDmPJUp9n.diag
[2025-10-12 17:45:57] -rw-r--r--. 1 boincer umatlas     21178 Oct 12 17:45 stderr.txt
[2025-10-12 17:45:57] HITS file was successfully produced:
[2025-10-12 17:45:57] -rw-------. 1 boincer umatlas 199164533 Oct 12 17:43 shared/HITS.pool.root.1
[2025-10-12 17:45:57]  *** Contents of shared directory: ***
[2025-10-12 17:45:57] total 411640
[2025-10-12 17:45:57] -rw-r--r--. 2 boincer umatlas 219569527 Oct 12 14:11 ATLAS.root_0
[2025-10-12 17:45:57] -rw-r--r--. 2 boincer umatlas    569680 Oct 12 14:11 input.tar.gz
[2025-10-12 17:45:57] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 14:11 start_atlas.sh
[2025-10-12 17:45:57] -rw-------. 1 boincer umatlas 199164533 Oct 12 17:43 HITS.pool.root.1
[2025-10-12 17:45:57] -rw-------. 1 boincer umatlas   2181120 Oct 12 17:45 result.tar.gz
17:45:58 (942755): run_atlas exited; CPU time 51760.602896
17:45:58 (942755): called boinc_finish(0)

</stderr_txt>
]]>

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