Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:10 (3478641): wrapper (7.7.26015): starting
00:01:10 (3478641): wrapper: running run_atlas (--nthreads 9)
[2025-10-12 00:01:10] Arguments: --nthreads 9
[2025-10-12 00:01:10] Threads: 9
[2025-10-12 00:01:10] Checking for CVMFS
[2025-10-12 00:01:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 00:01:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 00:01:12] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 00:01:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 00:01:14] 2.13.2.0 1969590 128755 282884 151606 0 114 24271069 32935937 29888 16776704 0 90988046 99.692 76873604 29723 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 00:01:14] CVMFS is ok
[2025-10-12 00:01:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 00:01:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 00:01:14] Further information can be found at the LHC@home message board.
[2025-10-12 00:01:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 00:01:14] Checking for apptainer binary...
[2025-10-12 00:01:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 00:01:14] Running /usr/bin/apptainer --version
[2025-10-12 00:01:14] apptainer version 1.4.3-1.el9
[2025-10-12 00:01:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 00:01:16] c-8-36.aglt2.org
[2025-10-12 00:01:16] apptainer works
[2025-10-12 00:01:16] Set ATHENA_PROC_NUMBER=9
[2025-10-12 00:01:16] Set ATHENA_CORE_NUMBER=9
[2025-10-12 00:01:16] Starting ATLAS job with PandaID=6839221603
[2025-10-12 00:01:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 12:37:23]  *** The last 200 lines of the pilot log: ***
[2025-10-12 12:37:23] 2025-10-12 16:36:21,156 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 12:37:23] 2025-10-12 16:36:21,156 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 12:37:23] 2025-10-12 16:36:21,157 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 12:37:23] 2025-10-12 16:36:21,172 | INFO     | fitting pss+swap vs Time
[2025-10-12 12:37:23] 2025-10-12 16:36:21,173 | INFO     | sum of square deviations: 125136524116.21654
[2025-10-12 12:37:23] 2025-10-12 16:36:21,210 | INFO     | sum of deviations: 508575557230.0421
[2025-10-12 12:37:23] 2025-10-12 16:36:21,210 | INFO     | mean x: 1760264424.8538566
[2025-10-12 12:37:23] 2025-10-12 16:36:21,210 | INFO     | mean y: 2174166.546684709
[2025-10-12 12:37:23] 2025-10-12 16:36:21,210 | INFO     | -- intersect: -7151831964.475909
[2025-10-12 12:37:23] 2025-10-12 16:36:21,210 | INFO     | intersect: -7151831964.475909
[2025-10-12 12:37:23] 2025-10-12 16:36:21,212 | INFO     | chi2: 5.117473259156914
[2025-10-12 12:37:23] 2025-10-12 16:36:21,213 | INFO     | sum of square deviations: 122613720425.04617
[2025-10-12 12:37:23] 2025-10-12 16:36:21,226 | INFO     | sum of deviations: 550272402974.7196
[2025-10-12 12:37:23] 2025-10-12 16:36:21,227 | INFO     | mean x: 1760264272.359673
[2025-10-12 12:37:23] 2025-10-12 16:36:21,227 | INFO     | mean y: 2176673.9972752044
[2025-10-12 12:37:23] 2025-10-12 16:36:21,227 | INFO     | -- intersect: -7897631338.222895
[2025-10-12 12:37:23] 2025-10-12 16:36:21,227 | INFO     | intersect: -7897631338.222895
[2025-10-12 12:37:23] 2025-10-12 16:36:21,228 | INFO     | chi2: 4.438391658891545
[2025-10-12 12:37:23] 2025-10-12 16:36:21,228 | INFO     | current chi2=4.438391658891545 (change=13.2698612357233 %)
[2025-10-12 12:37:23] 2025-10-12 16:36:21,228 | INFO     | right removable region: 733
[2025-10-12 12:37:23] 2025-10-12 16:36:21,229 | INFO     | sum of square deviations: 122613425184.47963
[2025-10-12 12:37:23] 2025-10-12 16:36:21,241 | INFO     | sum of deviations: 325682734414.70575
[2025-10-12 12:37:23] 2025-10-12 16:36:21,242 | INFO     | mean x: 1760264577.3569481
[2025-10-12 12:37:23] 2025-10-12 16:36:21,242 | INFO     | mean y: 2185211.940054496
[2025-10-12 12:37:23] 2025-10-12 16:36:21,242 | INFO     | -- intersect: -4673385835.719772
[2025-10-12 12:37:23] 2025-10-12 16:36:21,242 | INFO     | intersect: -4673385835.719772
[2025-10-12 12:37:23] 2025-10-12 16:36:21,243 | INFO     | chi2: 2.1712841865662993
[2025-10-12 12:37:23] 2025-10-12 16:36:21,243 | INFO     | current chi2=2.1712841865662993 (change=57.57116692928238 %)
[2025-10-12 12:37:23] 2025-10-12 16:36:21,245 | INFO     | sum of square deviations: 120124422387.00658
[2025-10-12 12:37:23] 2025-10-12 16:36:21,257 | INFO     | sum of deviations: 231510347441.89435
[2025-10-12 12:37:23] 2025-10-12 16:36:21,257 | INFO     | mean x: 1760264729.861454
[2025-10-12 12:37:23] 2025-10-12 16:36:21,258 | INFO     | mean y: 2190979.5336076817
[2025-10-12 12:37:23] 2025-10-12 16:36:21,258 | INFO     | -- intersect: -3390287345.040775
[2025-10-12 12:37:23] 2025-10-12 16:36:21,258 | INFO     | intersect: -3390287345.040775
[2025-10-12 12:37:23] 2025-10-12 16:36:21,259 | INFO     | chi2: 1.447289762882361
[2025-10-12 12:37:23] 2025-10-12 16:36:21,259 | INFO     | current chi2=1.447289762882361 (change=33.34406560703938 %)
[2025-10-12 12:37:23] 2025-10-12 16:36:21,260 | INFO     | sum of square deviations: 117669460123.18771
[2025-10-12 12:37:23] 2025-10-12 16:36:21,272 | INFO     | sum of deviations: 170803938440.54428
[2025-10-12 12:37:23] 2025-10-12 16:36:21,273 | INFO     | mean x: 1760264882.3618784
[2025-10-12 12:37:23] 2025-10-12 16:36:21,273 | INFO     | mean y: 2194746.5704419888
[2025-10-12 12:37:23] 2025-10-12 16:36:21,273 | INFO     | -- intersect: -2552930213.5613556
[2025-10-12 12:37:23] 2025-10-12 16:36:21,273 | INFO     | intersect: -2552930213.5613556
[2025-10-12 12:37:23] 2025-10-12 16:36:21,274 | INFO     | chi2: 1.1365791681751476
[2025-10-12 12:37:23] 2025-10-12 16:36:21,274 | INFO     | current chi2=1.1365791681751476 (change=21.468444168942053 %)
[2025-10-12 12:37:23] 2025-10-12 16:36:21,274 | INFO     | left removable region: 30
[2025-10-12 12:37:23] 2025-10-12 16:36:21,275 | INFO     | sum of square deviations: 107724014923.42992
[2025-10-12 12:37:23] 2025-10-12 16:36:21,287 | INFO     | sum of deviations: 167514698544.49915
[2025-10-12 12:37:23] 2025-10-12 16:36:21,287 | INFO     | mean x: 1760265156.8662872
[2025-10-12 12:37:23] 2025-10-12 16:36:21,288 | INFO     | mean y: 2200182.1223328593
[2025-10-12 12:37:23] 2025-10-12 16:36:21,288 | INFO     | -- intersect: -2735075134.9964633
[2025-10-12 12:37:23] 2025-10-12 16:36:21,288 | INFO     | intersect: -2735075134.9964633
[2025-10-12 12:37:23] 2025-10-12 16:36:21,289 | INFO     | chi2: 0.35618301040190214
[2025-10-12 12:37:23] 2025-10-12 16:36:21,289 | INFO     | -- intersect: -2735075134.9964633
[2025-10-12 12:37:23] 2025-10-12 16:36:21,289 | INFO     | current memory leak: 1.56 B/s (using 703 data points, chi2=0.36)
[2025-10-12 12:37:23] 2025-10-12 16:36:21,290 | INFO     | could have reported an average CPU frequency of 2600 MHz (28 samples)
[2025-10-12 12:37:23] 2025-10-12 16:36:21,290 | INFO     | ..............................
[2025-10-12 12:37:23] 2025-10-12 16:36:21,291 | INFO     | . Timing measurements:
[2025-10-12 12:37:23] 2025-10-12 16:36:21,291 | INFO     | . get job = 0 s
[2025-10-12 12:37:23] 2025-10-12 16:36:21,291 | INFO     | . initial setup = 6 s
[2025-10-12 12:37:23] 2025-10-12 16:36:21,291 | INFO     | . payload setup = 42 s
[2025-10-12 12:37:23] 2025-10-12 16:36:21,291 | INFO     | . stage-in = 0 s
[2025-10-12 12:37:23] 2025-10-12 16:36:21,291 | INFO     | . payload execution = 45090 s
[2025-10-12 12:37:23] 2025-10-12 16:36:21,291 | INFO     | . stage-out = 2 s
[2025-10-12 12:37:23] 2025-10-12 16:36:21,291 | INFO     | . log creation = 0 s
[2025-10-12 12:37:23] 2025-10-12 16:36:21,291 | INFO     | ..............................
[2025-10-12 12:37:23] 2025-10-12 16:36:21,732 | INFO     | 
[2025-10-12 12:37:23] 2025-10-12 16:36:21,733 | INFO     | job summary report
[2025-10-12 12:37:23] 2025-10-12 16:36:21,733 | INFO     | --------------------------------------------------
[2025-10-12 12:37:23] 2025-10-12 16:36:21,733 | INFO     | PanDA job id: 6839221603
[2025-10-12 12:37:23] 2025-10-12 16:36:21,733 | INFO     | task id: 46676269
[2025-10-12 12:37:23] 2025-10-12 16:36:21,733 | INFO     | errors: (none)
[2025-10-12 12:37:23] 2025-10-12 16:36:21,733 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 12:37:23] 2025-10-12 16:36:21,734 | INFO     | pilot state: finished 
[2025-10-12 12:37:23] 2025-10-12 16:36:21,734 | INFO     | transexitcode: 0
[2025-10-12 12:37:23] 2025-10-12 16:36:21,734 | INFO     | exeerrorcode: 0
[2025-10-12 12:37:23] 2025-10-12 16:36:21,734 | INFO     | exeerrordiag: 
[2025-10-12 12:37:23] 2025-10-12 16:36:21,734 | INFO     | exitcode: 0
[2025-10-12 12:37:23] 2025-10-12 16:36:21,734 | INFO     | exitmsg: OK
[2025-10-12 12:37:23] 2025-10-12 16:36:21,734 | INFO     | cpuconsumptiontime: 49573 s
[2025-10-12 12:37:23] 2025-10-12 16:36:21,734 | INFO     | nevents: 400
[2025-10-12 12:37:23] 2025-10-12 16:36:21,734 | INFO     | neventsw: 0
[2025-10-12 12:37:23] 2025-10-12 16:36:21,735 | INFO     | pid: 3519239
[2025-10-12 12:37:23] 2025-10-12 16:36:21,735 | INFO     | pgrp: 3519239
[2025-10-12 12:37:23] 2025-10-12 16:36:21,735 | INFO     | corecount: 9
[2025-10-12 12:37:23] 2025-10-12 16:36:21,735 | INFO     | event service: False
[2025-10-12 12:37:23] 2025-10-12 16:36:21,735 | INFO     | sizes: {0: 2348029, 1: 2348714, 2: 2348714, 3: 2348742, 4: 2348742, 5: 2349125, 17: 2349125, 28: 2349153, 36: 2349443, 40: 2349471, 45137: 2393845, 45140: 2402899,
[2025-10-12 12:37:23] 2025-10-12 16:36:21,735 | INFO     | --------------------------------------------------
[2025-10-12 12:37:23] 2025-10-12 16:36:21,735 | INFO     | 
[2025-10-12 12:37:23] 2025-10-12 16:36:21,736 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-12 12:37:23] 2025-10-12 16:36:21,825 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 12:37:23] 2025-10-12 16:36:21,825 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 12:37:23] 2025-10-12 16:36:21,825 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 12:37:23] 2025-10-12 16:36:21,825 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 12:37:23] 2025-10-12 16:36:21,825 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 12:37:23] 2025-10-12 16:36:21,826 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 12:37:23] 2025-10-12 16:36:21,826 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 12:37:23] 2025-10-12 16:36:21,826 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 12:37:23] 2025-10-12 16:36:21,826 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 12:37:23] 2025-10-12 16:36:21,826 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 12:37:23] 2025-10-12 16:36:21,826 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 12:37:23] 2025-10-12 16:36:21,826 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 12:37:23] 2025-10-12 16:36:21,826 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 12:37:23] 2025-10-12 16:36:21,827 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 12:37:23] 2025-10-12 16:36:21,827 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 12:37:23] 2025-10-12 16:36:21,827 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 12:37:23] 2025-10-12 16:36:21,827 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 12:37:23] 2025-10-12 16:36:21,827 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 12:37:23] 2025-10-12 16:36:21,827 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 12:37:23] 2025-10-12 16:36:21,827 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 12:37:23] 2025-10-12 16:36:21,827 | INFO     | job 6839221603 has completed (purged errors)
[2025-10-12 12:37:23] 2025-10-12 16:36:21,828 | INFO     | overall cleanup function is called
[2025-10-12 12:37:23] 2025-10-12 16:36:22,836 | INFO     | --- collectZombieJob: --- 10, [3519239]
[2025-10-12 12:37:23] 2025-10-12 16:36:22,836 | INFO     | zombie collector waiting for pid 3519239
[2025-10-12 12:37:23] 2025-10-12 16:36:22,836 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 12:37:23] 2025-10-12 16:36:22,836 | INFO     | collected zombie processes
[2025-10-12 12:37:23] 2025-10-12 16:36:22,837 | INFO     | will attempt to kill all subprocesses of pid=3519239
[2025-10-12 12:37:23] 2025-10-12 16:36:23,552 | INFO     | process IDs to be killed: [3519239] (in reverse order)
[2025-10-12 12:37:23] 2025-10-12 16:36:23,699 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 12:37:23] 2025-10-12 16:36:23,700 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 12:37:23] 2025-10-12 16:36:23,716 | INFO     | did not find any defunct processes belonging to 3519239
[2025-10-12 12:37:23] 2025-10-12 16:36:23,733 | INFO     | did not find any defunct processes belonging to 3519239
[2025-10-12 12:37:23] 2025-10-12 16:36:23,734 | INFO     | ready for new job
[2025-10-12 12:37:23] 2025-10-12 16:36:23,734 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 12:37:23] 2025-10-12 16:36:23,737 | INFO     | ***************************************
[2025-10-12 12:37:23] 2025-10-12 16:36:23,737 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 12:37:23] 2025-10-12 16:36:23,737 | INFO     | ***************************************
[2025-10-12 12:37:23] 2025-10-12 16:36:23,737 | INFO     | 
[2025-10-12 12:37:23] 2025-10-12 16:36:23,740 | INFO     | architecture information:
[2025-10-12 12:37:23] 2025-10-12 16:36:23,741 | INFO     | executing command: cat /etc/os-release
[2025-10-12 12:37:23] 2025-10-12 16:36:23,759 | INFO     | cat /etc/os-release:
[2025-10-12 12:37:23] NAME="CentOS Linux"
[2025-10-12 12:37:23] VERSION="7 (Core)"
[2025-10-12 12:37:23] ID="centos"
[2025-10-12 12:37:23] ID_LIKE="rhel fedora"
[2025-10-12 12:37:23] VERSION_ID="7"
[2025-10-12 12:37:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 12:37:23] ANSI_COLOR="0;31"
[2025-10-12 12:37:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 12:37:23] HOME_URL="https://www.centos.org/"
[2025-10-12 12:37:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 12:37:23] 
[2025-10-12 12:37:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 12:37:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 12:37:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 12:37:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 12:37:23] 
[2025-10-12 12:37:23] 2025-10-12 16:36:23,759 | INFO     | ***************************************
[2025-10-12 12:37:23] 2025-10-12 16:36:24,263 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-12 12:37:23] 2025-10-12 16:36:24,307 | INFO     | sufficient remaining disk space (75661049856 B)
[2025-10-12 12:37:23] 2025-10-12 16:36:24,307 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 12:37:23] 2025-10-12 16:36:24,308 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 12:37:23] 2025-10-12 16:36:24,308 | INFO     | update_server=False
[2025-10-12 12:37:23] 2025-10-12 16:36:24,308 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 12:37:23] 2025-10-12 16:36:24,390 | INFO     | all payload control threads have been joined
[2025-10-12 12:37:23] 2025-10-12 16:36:24,618 | INFO     | all data control threads have been joined
[2025-10-12 12:37:23] 2025-10-12 16:36:24,687 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 12:37:23] 2025-10-12 16:36:24,900 | INFO     | all job control threads have been joined
[2025-10-12 12:37:23] 2025-10-12 16:36:25,003 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 12:37:23] 2025-10-12 16:36:25,003 | INFO     | aborting loop
[2025-10-12 12:37:23] 2025-10-12 16:36:25,088 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 12:37:23] 2025-10-12 16:36:25,313 | INFO     | [job] retrieve thread has finished
[2025-10-12 12:37:23] 2025-10-12 16:36:25,398 | INFO     | [payload] control thread has finished
[2025-10-12 12:37:23] 2025-10-12 16:36:25,435 | INFO     | [payload] validate_post thread has finished
[2025-10-12 12:37:23] 2025-10-12 16:36:25,460 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 12:37:23] 2025-10-12 16:36:25,625 | INFO     | [data] control thread has finished
[2025-10-12 12:37:23] 2025-10-12 16:36:25,895 | INFO     | [data] copytool_in thread has finished
[2025-10-12 12:37:23] 2025-10-12 16:36:25,918 | INFO     | [job] control thread has finished
[2025-10-12 12:37:23] 2025-10-12 16:36:25,988 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 12:37:23] 2025-10-12 16:36:25,999 | INFO     | [job] validate thread has finished
[2025-10-12 12:37:23] 2025-10-12 16:36:26,022 | INFO     | [job] job monitor thread has finished
[2025-10-12 12:37:23] 2025-10-12 16:36:26,322 | INFO     | [payload] failed_post thread has finished
[2025-10-12 12:37:23] 2025-10-12 16:36:26,345 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 12:37:23] 2025-10-12 16:36:26,439 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 12:37:23] 2025-10-12 16:36:26,776 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 12:37:23] 2025-10-12 16:36:27,096 | INFO     | [data] copytool_out thread has finished
[2025-10-12 12:37:23] 2025-10-12 16:36:27,451 | INFO     | [job] queue monitor thread has finished
[2025-10-12 12:37:23] 2025-10-12 16:36:28,701 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 12:37:23] 2025-10-12 16:36:54,084 | INFO     | PID=3493376 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 12:37:23] 2025-10-12 16:36:54,084 | INFO     | .. there are 41 such processes running
[2025-10-12 12:37:23] 2025-10-12 16:36:54,086 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 12:37:23] 2025-10-12 16:36:54,086 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 12:37:23] 2025-10-12 16:36:54,086 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 12:37:23] 2025-10-12 16:37:15,601 | INFO     | [monitor] cgroup control has ended
[2025-10-12 12:37:23] 2025-10-12 16:37:17,544 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139746017552192)>', '<ExcThread(monitor, started 139745510270720)>']
[2025-10-12 12:37:23] 2025-10-12 16:37:18,281 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 12:37:23] 2025-10-12 16:37:18,282 | INFO     | [monitor] control thread has ended
[2025-10-12 12:37:23] 2025-10-12 16:37:22,569 | INFO     | all workflow threads have been joined
[2025-10-12 12:37:23] 2025-10-12 16:37:22,584 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 12:37:23] 2025-10-12 16:37:22,585 | INFO     | traces error code: 0
[2025-10-12 12:37:23] 2025-10-12 16:37:22,585 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 12:37:23] 2025-10-12 16:37:22,897 [wrapper] ==== pilot stdout END ====
[2025-10-12 12:37:23] 2025-10-12 16:37:22,907 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 12:37:23] 2025-10-12 16:37:22,924 [wrapper] pilotpid: 3493376
[2025-10-12 12:37:23] 2025-10-12 16:37:22,932 [wrapper] Pilot exit status: 0
[2025-10-12 12:37:23] 2025-10-12 16:37:22,977 [wrapper] pandaids: 6839221603
[2025-10-12 12:37:23] 2025-10-12 16:37:23,288 [wrapper] cleanup supervisor_pilot 1638059 3493377
[2025-10-12 12:37:23] 2025-10-12 16:37:23,310 [wrapper] Test setup, not cleaning
[2025-10-12 12:37:23] 2025-10-12 16:37:23,329 [wrapper] apfmon messages muted
[2025-10-12 12:37:23] 2025-10-12 16:37:23,332 [wrapper] ==== wrapper stdout END ====
[2025-10-12 12:37:23] 2025-10-12 16:37:23,335 [wrapper] ==== wrapper stderr END ====
[2025-10-12 12:37:23]  *** Error codes and diagnostics ***
[2025-10-12 12:37:23]     "exeErrorCode": 0,
[2025-10-12 12:37:23]     "exeErrorDiag": "",
[2025-10-12 12:37:23]     "pilotErrorCode": 0,
[2025-10-12 12:37:23]     "pilotErrorDiag": "",
[2025-10-12 12:37:23]  *** Listing of results directory ***
[2025-10-12 12:37:23] total 423192
[2025-10-12 12:37:23] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 21:26 pilot3.tar.gz
[2025-10-12 12:37:23] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 21:32 queuedata.json
[2025-10-12 12:37:23] -rwx------. 1 boincer umatlas     36292 Oct 11 21:33 runpilot2-wrapper.sh
[2025-10-12 12:37:23] -rw-r--r--. 1 boincer umatlas       100 Oct 12 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 12:37:23] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 00:01 run_atlas
[2025-10-12 12:37:23] -rw-r--r--. 1 boincer umatlas       105 Oct 12 00:01 job.xml
[2025-10-12 12:37:23] -rw-r--r--. 2 boincer umatlas 219569527 Oct 12 00:01 EVNT.46676267._003153.pool.root.1
[2025-10-12 12:37:23] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:01 start_atlas.sh
[2025-10-12 12:37:23] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 00:01 shared
[2025-10-12 12:37:23] -rw-r--r--. 2 boincer umatlas    569680 Oct 12 00:01 input.tar.gz
[2025-10-12 12:37:23] -rw-r--r--. 1 boincer umatlas         0 Oct 12 00:01 boinc_lockfile
[2025-10-12 12:37:23] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 00:01 pandaJob.out
[2025-10-12 12:37:23] -rw-------. 1 boincer umatlas    975512 Oct 12 00:02 agis_schedconf.cvmfs.json
[2025-10-12 12:37:23] drwx------. 5 boincer umatlas      4096 Oct 12 00:02 pilot3
[2025-10-12 12:37:23] -rw-r--r--. 1 boincer umatlas      6659 Oct 12 12:30 init_data.xml
[2025-10-12 12:37:23] -rw-------. 1 boincer umatlas 198585338 Oct 12 12:35 HITS.46676269._068615.pool.root.1
[2025-10-12 12:37:23] -rw-r--r--. 1 boincer umatlas       531 Oct 12 12:35 boinc_task_state.xml
[2025-10-12 12:37:23] -rw-------. 1 boincer umatlas      1041 Oct 12 12:36 memory_monitor_summary.json
[2025-10-12 12:37:23] -rw-------. 1 boincer umatlas   1560580 Oct 12 12:36 agis_ddmendpoints.agis.ALL.json
[2025-10-12 12:37:23] -rw-------. 1 boincer umatlas    813378 Oct 12 12:36 log.46676269._068615.job.log.tgz.1
[2025-10-12 12:37:23] -rw-------. 1 boincer umatlas      7824 Oct 12 12:36 heartbeat.json
[2025-10-12 12:37:23] -rw-------. 1 boincer umatlas        95 Oct 12 12:36 pilot_heartbeat.json
[2025-10-12 12:37:23] -rw-------. 1 boincer umatlas      4824 Oct 12 12:37 pilotlog.txt
[2025-10-12 12:37:23] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 12:37 boinc_mmap_file
[2025-10-12 12:37:23] -rw-r--r--. 1 boincer umatlas        28 Oct 12 12:37 wrapper_checkpoint.txt
[2025-10-12 12:37:23] -rw-------. 1 boincer umatlas   4829485 Oct 12 12:37 log.46676269._068615.job.log.1
[2025-10-12 12:37:23] -rw-------. 1 boincer umatlas       357 Oct 12 12:37 output.list
[2025-10-12 12:37:23] -rw-r--r--. 1 boincer umatlas       620 Oct 12 12:37 runtime_log
[2025-10-12 12:37:23] -rw-------. 1 boincer umatlas   5662720 Oct 12 12:37 result.tar.gz
[2025-10-12 12:37:23] -rw-------. 1 boincer umatlas       656 Oct 12 12:37 yr0MDmB9zR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmCEiNDm83m9im.diag
[2025-10-12 12:37:23] -rw-r--r--. 1 boincer umatlas      8694 Oct 12 12:37 runtime_log.err
[2025-10-12 12:37:23] -rw-r--r--. 1 boincer umatlas     21032 Oct 12 12:37 stderr.txt
[2025-10-12 12:37:23] HITS file was successfully produced:
[2025-10-12 12:37:23] -rw-------. 1 boincer umatlas 198585338 Oct 12 12:35 shared/HITS.pool.root.1
[2025-10-12 12:37:23]  *** Contents of shared directory: ***
[2025-10-12 12:37:23] total 414472
[2025-10-12 12:37:23] -rw-r--r--. 2 boincer umatlas 219569527 Oct 12 00:01 ATLAS.root_0
[2025-10-12 12:37:23] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:01 start_atlas.sh
[2025-10-12 12:37:23] -rw-r--r--. 2 boincer umatlas    569680 Oct 12 00:01 input.tar.gz
[2025-10-12 12:37:23] -rw-------. 1 boincer umatlas 198585338 Oct 12 12:35 HITS.pool.root.1
[2025-10-12 12:37:23] -rw-------. 1 boincer umatlas   5662720 Oct 12 12:37 result.tar.gz
12:37:25 (3478641): run_atlas exited; CPU time 51309.371040
12:37:25 (3478641): called boinc_finish(0)

</stderr_txt>
]]>

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