Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:32 (2632386): wrapper (7.7.26015): starting
00:01:32 (2632386): wrapper: running run_atlas (--nthreads 10)
[2025-10-12 00:01:32] Arguments: --nthreads 10
[2025-10-12 00:01:32] Threads: 10
[2025-10-12 00:01:32] Checking for CVMFS
[2025-10-12 00:01:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 00:01:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 00:01:33] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 00:01:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 00:01:34] 2.13.2.0 2815078 128738 432004 151606 2 281 30640769 32947201 40458 16776704 0 260129563 99.642 247562855 21393 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 00:01:34] CVMFS is ok
[2025-10-12 00:01:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 00:01:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 00:01:34] Further information can be found at the LHC@home message board.
[2025-10-12 00:01:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 00:01:34] Checking for apptainer binary...
[2025-10-12 00:01:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 00:01:34] Running /usr/bin/apptainer --version
[2025-10-12 00:01:34] apptainer version 1.4.3-1.el9
[2025-10-12 00:01:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 00:01:35] c6-6-8-2.aglt2.org
[2025-10-12 00:01:35] apptainer works
[2025-10-12 00:01:35] Set ATHENA_PROC_NUMBER=10
[2025-10-12 00:01:35] Set ATHENA_CORE_NUMBER=10
[2025-10-12 00:01:35] Starting ATLAS job with PandaID=6839221428
[2025-10-12 00:01:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 03:17:24]  *** The last 200 lines of the pilot log: ***
[2025-10-12 03:17:24] 2025-10-12 07:16:46,811 | INFO     | mean x: 1760247636.7074468
[2025-10-12 03:17:24] 2025-10-12 07:16:46,811 | INFO     | mean y: 2074871.8882978724
[2025-10-12 03:17:24] 2025-10-12 07:16:46,811 | INFO     | -- intersect: -52126698557.949005
[2025-10-12 03:17:24] 2025-10-12 07:16:46,811 | INFO     | intersect: -52126698557.949005
[2025-10-12 03:17:24] 2025-10-12 07:16:46,813 | INFO     | chi2: 7.260120721827607
[2025-10-12 03:17:24] 2025-10-12 07:16:46,814 | INFO     | sum of square deviations: 1900140280.6885214
[2025-10-12 03:17:24] 2025-10-12 07:16:46,815 | INFO     | sum of deviations: 100908571332.91803
[2025-10-12 03:17:24] 2025-10-12 07:16:46,815 | INFO     | mean x: 1760247484.2131147
[2025-10-12 03:17:24] 2025-10-12 07:16:46,815 | INFO     | mean y: 2112694.6174863386
[2025-10-12 03:17:24] 2025-10-12 07:16:46,815 | INFO     | -- intersect: -93477332286.1215
[2025-10-12 03:17:24] 2025-10-12 07:16:46,815 | INFO     | intersect: -93477332286.1215
[2025-10-12 03:17:24] 2025-10-12 07:16:46,816 | INFO     | chi2: 4.177406163845417
[2025-10-12 03:17:24] 2025-10-12 07:16:46,816 | INFO     | current chi2=4.177406163845417 (change=42.460926974864016 %)
[2025-10-12 03:17:24] 2025-10-12 07:16:46,816 | INFO     | sum of square deviations: 1748605147.9550579
[2025-10-12 03:17:24] 2025-10-12 07:16:46,821 | INFO     | sum of deviations: 97383494622.70789
[2025-10-12 03:17:24] 2025-10-12 07:16:46,822 | INFO     | mean x: 1760247331.7191012
[2025-10-12 03:17:24] 2025-10-12 07:16:46,822 | INFO     | mean y: 2109135.1741573033
[2025-10-12 03:17:24] 2025-10-12 07:16:46,822 | INFO     | -- intersect: -98029763162.33823
[2025-10-12 03:17:24] 2025-10-12 07:16:46,822 | INFO     | intersect: -98029763162.33823
[2025-10-12 03:17:24] 2025-10-12 07:16:46,822 | INFO     | chi2: 4.1658653039317795
[2025-10-12 03:17:24] 2025-10-12 07:16:46,823 | INFO     | current chi2=4.1658653039317795 (change=0.27626856142266076 %)
[2025-10-12 03:17:24] 2025-10-12 07:16:46,823 | INFO     | right removable region: 177
[2025-10-12 03:17:24] 2025-10-12 07:16:46,823 | INFO     | sum of square deviations: 1900116490.6885214
[2025-10-12 03:17:24] 2025-10-12 07:16:46,824 | INFO     | sum of deviations: 16917260967.770443
[2025-10-12 03:17:24] 2025-10-12 07:16:46,829 | INFO     | mean x: 1760247789.2131147
[2025-10-12 03:17:24] 2025-10-12 07:16:46,829 | INFO     | mean y: 2116753.9289617487
[2025-10-12 03:17:24] 2025-10-12 07:16:46,829 | INFO     | -- intersect: -15669854603.61068
[2025-10-12 03:17:24] 2025-10-12 07:16:46,829 | INFO     | intersect: -15669854603.61068
[2025-10-12 03:17:24] 2025-10-12 07:16:46,830 | INFO     | chi2: 4.363903856177077
[2025-10-12 03:17:24] 2025-10-12 07:16:46,830 | INFO     | current chi2=4.363903856177077 (change=39.892130952355 %)
[2025-10-12 03:17:24] 2025-10-12 07:16:46,830 | INFO     | sum of square deviations: 1748579770.8089914
[2025-10-12 03:17:24] 2025-10-12 07:16:46,831 | INFO     | sum of deviations: -7406395604.606747
[2025-10-12 03:17:24] 2025-10-12 07:16:46,831 | INFO     | mean x: 1760247941.7078652
[2025-10-12 03:17:24] 2025-10-12 07:16:46,831 | INFO     | mean y: 2141215.2191011235
[2025-10-12 03:17:24] 2025-10-12 07:16:46,832 | INFO     | -- intersect: 7457959266.031569
[2025-10-12 03:17:24] 2025-10-12 07:16:46,832 | INFO     | intersect: 7457959266.031569
[2025-10-12 03:17:24] 2025-10-12 07:16:46,832 | INFO     | chi2: 3.579249510878327
[2025-10-12 03:17:24] 2025-10-12 07:16:46,832 | INFO     | current chi2=3.579249510878327 (change=17.980559864720146 %)
[2025-10-12 03:17:24] 2025-10-12 07:16:46,832 | INFO     | left removable region: 20
[2025-10-12 03:17:24] 2025-10-12 07:16:46,837 | INFO     | sum of square deviations: 1199805743.1974518
[2025-10-12 03:17:24] 2025-10-12 07:16:46,838 | INFO     | sum of deviations: 10079089167.388536
[2025-10-12 03:17:24] 2025-10-12 07:16:46,838 | INFO     | mean x: 1760247911.22293
[2025-10-12 03:17:24] 2025-10-12 07:16:46,838 | INFO     | mean y: 2206640.5031847134
[2025-10-12 03:17:24] 2025-10-12 07:16:46,838 | INFO     | -- intersect: -14784933489.901726
[2025-10-12 03:17:24] 2025-10-12 07:16:46,838 | INFO     | intersect: -14784933489.901726
[2025-10-12 03:17:24] 2025-10-12 07:16:46,839 | INFO     | chi2: 0.058375071557776395
[2025-10-12 03:17:24] 2025-10-12 07:16:46,839 | INFO     | -- intersect: -14784933489.901726
[2025-10-12 03:17:24] 2025-10-12 07:16:46,839 | INFO     | current memory leak: 8.40 B/s (using 157 data points, chi2=0.06)
[2025-10-12 03:17:24] 2025-10-12 07:16:46,840 | INFO     | could have reported an average CPU frequency of 2596 MHz (10 samples)
[2025-10-12 03:17:24] 2025-10-12 07:16:46,840 | INFO     | ..............................
[2025-10-12 03:17:24] 2025-10-12 07:16:46,840 | INFO     | . Timing measurements:
[2025-10-12 03:17:24] 2025-10-12 07:16:46,840 | INFO     | . get job = 0 s
[2025-10-12 03:17:24] 2025-10-12 07:16:46,840 | INFO     | . initial setup = 7 s
[2025-10-12 03:17:24] 2025-10-12 07:16:46,840 | INFO     | . payload setup = 46 s
[2025-10-12 03:17:24] 2025-10-12 07:16:46,845 | INFO     | . stage-in = 0 s
[2025-10-12 03:17:24] 2025-10-12 07:16:46,845 | INFO     | . payload execution = 11450 s
[2025-10-12 03:17:24] 2025-10-12 07:16:46,845 | INFO     | . stage-out = 4 s
[2025-10-12 03:17:24] 2025-10-12 07:16:46,845 | INFO     | . log creation = 0 s
[2025-10-12 03:17:24] 2025-10-12 07:16:46,845 | INFO     | ..............................
[2025-10-12 03:17:24] 2025-10-12 07:16:47,672 | INFO     | 
[2025-10-12 03:17:24] 2025-10-12 07:16:47,672 | INFO     | job summary report
[2025-10-12 03:17:24] 2025-10-12 07:16:47,672 | INFO     | --------------------------------------------------
[2025-10-12 03:17:24] 2025-10-12 07:16:47,672 | INFO     | PanDA job id: 6839221428
[2025-10-12 03:17:24] 2025-10-12 07:16:47,672 | INFO     | task id: 46676269
[2025-10-12 03:17:24] 2025-10-12 07:16:47,672 | INFO     | errors: (none)
[2025-10-12 03:17:24] 2025-10-12 07:16:47,672 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 03:17:24] 2025-10-12 07:16:47,672 | INFO     | pilot state: finished 
[2025-10-12 03:17:24] 2025-10-12 07:16:47,672 | INFO     | transexitcode: 0
[2025-10-12 03:17:24] 2025-10-12 07:16:47,673 | INFO     | exeerrorcode: 0
[2025-10-12 03:17:24] 2025-10-12 07:16:47,673 | INFO     | exeerrordiag: 
[2025-10-12 03:17:24] 2025-10-12 07:16:47,673 | INFO     | exitcode: 0
[2025-10-12 03:17:24] 2025-10-12 07:16:47,673 | INFO     | exitmsg: OK
[2025-10-12 03:17:24] 2025-10-12 07:16:47,673 | INFO     | cpuconsumptiontime: 42659 s
[2025-10-12 03:17:24] 2025-10-12 07:16:47,673 | INFO     | nevents: 400
[2025-10-12 03:17:24] 2025-10-12 07:16:47,673 | INFO     | neventsw: 0
[2025-10-12 03:17:24] 2025-10-12 07:16:47,673 | INFO     | pid: 2695265
[2025-10-12 03:17:24] 2025-10-12 07:16:47,673 | INFO     | pgrp: 2695265
[2025-10-12 03:17:24] 2025-10-12 07:16:47,673 | INFO     | corecount: 10
[2025-10-12 03:17:24] 2025-10-12 07:16:47,673 | INFO     | event service: False
[2025-10-12 03:17:24] 2025-10-12 07:16:47,673 | INFO     | sizes: {0: 2348630, 1: 2348714, 2: 2348913, 14: 2348913, 26: 2348941, 37: 2349387, 48: 2349387, 11502: 2378482, 11503: 2378481, 11508: 2387535, 11509: 2387591, 115
[2025-10-12 03:17:24] 2025-10-12 07:16:47,673 | INFO     | --------------------------------------------------
[2025-10-12 03:17:24] 2025-10-12 07:16:47,674 | INFO     | 
[2025-10-12 03:17:24] 2025-10-12 07:16:47,674 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2025-10-12 03:17:24] 2025-10-12 07:16:47,870 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 03:17:24] 2025-10-12 07:16:47,871 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 03:17:24] 2025-10-12 07:16:47,871 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 03:17:24] 2025-10-12 07:16:47,871 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 03:17:24] 2025-10-12 07:16:47,871 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 03:17:24] 2025-10-12 07:16:47,871 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 03:17:24] 2025-10-12 07:16:47,871 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 03:17:24] 2025-10-12 07:16:47,871 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 03:17:24] 2025-10-12 07:16:47,871 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 03:17:24] 2025-10-12 07:16:47,871 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 03:17:24] 2025-10-12 07:16:47,871 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 03:17:24] 2025-10-12 07:16:47,871 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 03:17:24] 2025-10-12 07:16:47,872 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 03:17:24] 2025-10-12 07:16:47,872 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 03:17:24] 2025-10-12 07:16:47,872 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 03:17:24] 2025-10-12 07:16:47,872 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 03:17:24] 2025-10-12 07:16:47,872 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 03:17:24] 2025-10-12 07:16:47,872 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 03:17:24] 2025-10-12 07:16:47,872 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 03:17:24] 2025-10-12 07:16:47,872 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 03:17:24] 2025-10-12 07:16:47,872 | INFO     | job 6839221428 has completed (purged errors)
[2025-10-12 03:17:24] 2025-10-12 07:16:47,872 | INFO     | overall cleanup function is called
[2025-10-12 03:17:24] 2025-10-12 07:16:48,615 | INFO     | PID=2648415 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 03:17:24] 2025-10-12 07:16:48,616 | INFO     | .. there are 45 such processes running
[2025-10-12 03:17:24] 2025-10-12 07:16:49,130 | INFO     | --- collectZombieJob: --- 10, [2695265]
[2025-10-12 03:17:24] 2025-10-12 07:16:49,130 | INFO     | zombie collector waiting for pid 2695265
[2025-10-12 03:17:24] 2025-10-12 07:16:49,130 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 03:17:24] 2025-10-12 07:16:49,130 | INFO     | collected zombie processes
[2025-10-12 03:17:24] 2025-10-12 07:16:49,130 | INFO     | will attempt to kill all subprocesses of pid=2695265
[2025-10-12 03:17:24] 2025-10-12 07:16:54,856 | INFO     | number of running child processes to parent process 2695265: 1
[2025-10-12 03:17:24] 2025-10-12 07:16:54,874 | INFO     | maximum number of monitored processes: 6
[2025-10-12 03:17:24] 2025-10-12 07:16:54,874 | INFO     | aborting job monitoring since job object (job id=6839221428) has expired
[2025-10-12 03:17:24] 2025-10-12 07:16:56,022 | INFO     | process IDs to be killed: [2695265] (in reverse order)
[2025-10-12 03:17:24] 2025-10-12 07:16:56,621 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 03:17:24] 2025-10-12 07:16:56,622 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 03:17:24] 2025-10-12 07:16:56,660 | INFO     | did not find any defunct processes belonging to 2695265
[2025-10-12 03:17:24] 2025-10-12 07:16:56,700 | INFO     | did not find any defunct processes belonging to 2695265
[2025-10-12 03:17:24] 2025-10-12 07:16:56,700 | INFO     | ready for new job
[2025-10-12 03:17:24] 2025-10-12 07:16:56,700 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 03:17:24] 2025-10-12 07:16:56,702 | INFO     | ***************************************
[2025-10-12 03:17:24] 2025-10-12 07:16:56,702 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 03:17:24] 2025-10-12 07:16:56,707 | INFO     | ***************************************
[2025-10-12 03:17:24] 2025-10-12 07:16:56,707 | INFO     | 
[2025-10-12 03:17:24] 2025-10-12 07:16:56,734 | INFO     | architecture information:
[2025-10-12 03:17:24] 2025-10-12 07:16:56,738 | INFO     | executing command: cat /etc/os-release
[2025-10-12 03:17:24] 2025-10-12 07:16:56,815 | INFO     | cat /etc/os-release:
[2025-10-12 03:17:24] NAME="CentOS Linux"
[2025-10-12 03:17:24] VERSION="7 (Core)"
[2025-10-12 03:17:24] ID="centos"
[2025-10-12 03:17:24] ID_LIKE="rhel fedora"
[2025-10-12 03:17:24] VERSION_ID="7"
[2025-10-12 03:17:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 03:17:24] ANSI_COLOR="0;31"
[2025-10-12 03:17:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 03:17:24] HOME_URL="https://www.centos.org/"
[2025-10-12 03:17:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 03:17:24] 
[2025-10-12 03:17:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 03:17:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 03:17:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 03:17:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 03:17:24] 
[2025-10-12 03:17:24] 2025-10-12 07:16:56,815 | INFO     | ***************************************
[2025-10-12 03:17:24] 2025-10-12 07:16:57,319 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2025-10-12 03:17:24] 2025-10-12 07:16:57,455 | INFO     | sufficient remaining disk space (72646393856 B)
[2025-10-12 03:17:24] 2025-10-12 07:16:57,455 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 03:17:24] 2025-10-12 07:16:57,456 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 03:17:24] 2025-10-12 07:16:57,456 | INFO     | update_server=False
[2025-10-12 03:17:24] 2025-10-12 07:16:57,456 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 03:17:24] 2025-10-12 07:16:57,456 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 03:17:24] 2025-10-12 07:16:57,597 | INFO     | all payload control threads have been joined
[2025-10-12 03:17:24] 2025-10-12 07:16:57,902 | INFO     | all job control threads have been joined
[2025-10-12 03:17:24] 2025-10-12 07:16:58,175 | INFO     | all data control threads have been joined
[2025-10-12 03:17:24] 2025-10-12 07:16:58,450 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 03:17:24] 2025-10-12 07:16:58,450 | INFO     | aborting loop
[2025-10-12 03:17:24] 2025-10-12 07:16:58,461 | INFO     | [job] retrieve thread has finished
[2025-10-12 03:17:24] 2025-10-12 07:16:58,461 | INFO     | [job] queue monitor thread has finished
[2025-10-12 03:17:24] 2025-10-12 07:16:58,584 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 03:17:24] 2025-10-12 07:16:58,603 | INFO     | [payload] control thread has finished
[2025-10-12 03:17:24] 2025-10-12 07:16:58,790 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 03:17:24] 2025-10-12 07:16:58,907 | INFO     | [job] control thread has finished
[2025-10-12 03:17:24] 2025-10-12 07:16:59,190 | INFO     | [data] control thread has finished
[2025-10-12 03:17:24] 2025-10-12 07:16:59,474 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 03:17:24] 2025-10-12 07:16:59,474 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 03:17:24] 2025-10-12 07:16:59,481 | INFO     | [data] copytool_in thread has finished
[2025-10-12 03:17:24] 2025-10-12 07:16:59,481 | INFO     | [job] validate thread has finished
[2025-10-12 03:17:24] 2025-10-12 07:16:59,488 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 03:17:24] 2025-10-12 07:16:59,488 | INFO     | [job] job monitor thread has finished
[2025-10-12 03:17:24] 2025-10-12 07:16:59,846 | INFO     | [payload] validate_post thread has finished
[2025-10-12 03:17:24] 2025-10-12 07:16:59,847 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 03:17:24] 2025-10-12 07:16:59,942 | INFO     | [payload] failed_post thread has finished
[2025-10-12 03:17:24] 2025-10-12 07:17:00,797 | INFO     | [data] copytool_out thread has finished
[2025-10-12 03:17:24] 2025-10-12 07:17:03,887 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 03:17:24] 2025-10-12 07:17:14,337 | INFO     | [monitor] cgroup control has ended
[2025-10-12 03:17:24] 2025-10-12 07:17:15,274 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140057209366336)>', '<ExcThread(monitor, started 140056710858496)>']
[2025-10-12 03:17:24] 2025-10-12 07:17:20,300 | INFO     | all workflow threads have been joined
[2025-10-12 03:17:24] 2025-10-12 07:17:20,300 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 03:17:24] 2025-10-12 07:17:20,300 | INFO     | traces error code: 0
[2025-10-12 03:17:24] 2025-10-12 07:17:20,300 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 03:17:24] 2025-10-12 07:17:21,772 | INFO     | PID=2648415 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 03:17:24] 2025-10-12 07:17:21,773 | INFO     | .. there are 45 such processes running
[2025-10-12 03:17:24] 2025-10-12 07:17:21,774 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 03:17:24] 2025-10-12 07:17:21,774 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 03:17:24] 2025-10-12 07:17:21,774 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 03:17:24] 2025-10-12 07:17:21,774 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 03:17:24] 2025-10-12 07:17:21,774 | CRITICAL | thread 'MainThread' is not alive
[2025-10-12 03:17:24] 2025-10-12 07:17:21,775 | INFO     | [monitor] control thread has ended
[2025-10-12 03:17:24] 2025-10-12 07:17:23,173 [wrapper] ==== pilot stdout END ====
[2025-10-12 03:17:24] 2025-10-12 07:17:23,189 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 03:17:24] 2025-10-12 07:17:23,205 [wrapper] pilotpid: 2648415
[2025-10-12 03:17:24] 2025-10-12 07:17:23,221 [wrapper] Pilot exit status: 0
[2025-10-12 03:17:24] 2025-10-12 07:17:23,318 [wrapper] pandaids: 6839221428
[2025-10-12 03:17:24] 2025-10-12 07:17:23,760 [wrapper] cleanup supervisor_pilot 3471674 2648417
[2025-10-12 03:17:24] 2025-10-12 07:17:23,772 [wrapper] Test setup, not cleaning
[2025-10-12 03:17:24] 2025-10-12 07:17:23,787 [wrapper] apfmon messages muted
[2025-10-12 03:17:24] 2025-10-12 07:17:23,806 [wrapper] ==== wrapper stdout END ====
[2025-10-12 03:17:24] 2025-10-12 07:17:23,829 [wrapper] ==== wrapper stderr END ====
[2025-10-12 03:17:24]  *** Error codes and diagnostics ***
[2025-10-12 03:17:24]     "exeErrorCode": 0,
[2025-10-12 03:17:24]     "exeErrorDiag": "",
[2025-10-12 03:17:24]     "pilotErrorCode": 0,
[2025-10-12 03:17:24]     "pilotErrorDiag": "",
[2025-10-12 03:17:24]  *** Listing of results directory ***
[2025-10-12 03:17:24] total 406512
[2025-10-12 03:17:24] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 21:26 pilot3.tar.gz
[2025-10-12 03:17:24] -rwx------ 1 boincer umatlas     36292 Oct 11 21:32 runpilot2-wrapper.sh
[2025-10-12 03:17:24] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 21:32 queuedata.json
[2025-10-12 03:17:24] -rw-r--r-- 1 boincer umatlas       100 Oct 12 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 03:17:24] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 00:01 run_atlas
[2025-10-12 03:17:24] -rw-r--r-- 1 boincer umatlas       105 Oct 12 00:01 job.xml
[2025-10-12 03:17:24] -rw-r--r-- 2 boincer umatlas 218589336 Oct 12 00:01 EVNT.46676267._003149.pool.root.1
[2025-10-12 03:17:24] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 00:01 start_atlas.sh
[2025-10-12 03:17:24] drwxrwx--x 2 boincer umatlas      4096 Oct 12 00:01 shared
[2025-10-12 03:17:24] -rw-r--r-- 2 boincer umatlas    569673 Oct 12 00:01 input.tar.gz
[2025-10-12 03:17:24] -rw-r--r-- 1 boincer umatlas         0 Oct 12 00:01 boinc_lockfile
[2025-10-12 03:17:24] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 00:01 pandaJob.out
[2025-10-12 03:17:24] -rw------- 1 boincer umatlas    975512 Oct 12 00:02 agis_schedconf.cvmfs.json
[2025-10-12 03:17:24] drwx------ 5 boincer umatlas      4096 Oct 12 00:02 pilot3
[2025-10-12 03:17:24] -rw------- 1 boincer umatlas 190258302 Oct 12 03:12 HITS.46676269._068513.pool.root.1
[2025-10-12 03:17:24] -rw-r--r-- 1 boincer umatlas       531 Oct 12 03:12 boinc_task_state.xml
[2025-10-12 03:17:24] -rw-r--r-- 1 boincer umatlas      6857 Oct 12 03:12 init_data.xml
[2025-10-12 03:17:24] -rw------- 1 boincer umatlas      1044 Oct 12 03:15 memory_monitor_summary.json
[2025-10-12 03:17:24] -rw------- 1 boincer umatlas   1560580 Oct 12 03:16 agis_ddmendpoints.agis.ALL.json
[2025-10-12 03:17:24] -rw------- 1 boincer umatlas    437266 Oct 12 03:16 log.46676269._068513.job.log.tgz.1
[2025-10-12 03:17:24] -rw------- 1 boincer umatlas      7836 Oct 12 03:16 heartbeat.json
[2025-10-12 03:17:24] -rw------- 1 boincer umatlas        95 Oct 12 03:17 pilot_heartbeat.json
[2025-10-12 03:17:24] -rw------- 1 boincer umatlas       893 Oct 12 03:17 pilotlog.txt
[2025-10-12 03:17:24] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 03:17 boinc_mmap_file
[2025-10-12 03:17:24] -rw-r--r-- 1 boincer umatlas        28 Oct 12 03:17 wrapper_checkpoint.txt
[2025-10-12 03:17:24] -rw------- 1 boincer umatlas   1325714 Oct 12 03:17 log.46676269._068513.job.log.1
[2025-10-12 03:17:24] -rw------- 1 boincer umatlas       357 Oct 12 03:17 output.list
[2025-10-12 03:17:24] -rw-r--r-- 1 boincer umatlas       620 Oct 12 03:17 runtime_log
[2025-10-12 03:17:24] -rw------- 1 boincer umatlas   1781760 Oct 12 03:17 result.tar.gz
[2025-10-12 03:17:24] -rw------- 1 boincer umatlas       655 Oct 12 03:17 XDjNDmC8zR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmTDiNDmTUFz3m.diag
[2025-10-12 03:17:24] -rw-r--r-- 1 boincer umatlas      8706 Oct 12 03:17 runtime_log.err
[2025-10-12 03:17:24] -rw-r--r-- 1 boincer umatlas     21223 Oct 12 03:17 stderr.txt
[2025-10-12 03:17:24] HITS file was successfully produced:
[2025-10-12 03:17:24] -rw------- 1 boincer umatlas 190258302 Oct 12 03:12 shared/HITS.pool.root.1
[2025-10-12 03:17:24]  *** Contents of shared directory: ***
[2025-10-12 03:17:24] total 401588
[2025-10-12 03:17:24] -rw-r--r-- 2 boincer umatlas 218589336 Oct 12 00:01 ATLAS.root_0
[2025-10-12 03:17:24] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 00:01 start_atlas.sh
[2025-10-12 03:17:24] -rw-r--r-- 2 boincer umatlas    569673 Oct 12 00:01 input.tar.gz
[2025-10-12 03:17:24] -rw------- 1 boincer umatlas 190258302 Oct 12 03:12 HITS.pool.root.1
[2025-10-12 03:17:24] -rw------- 1 boincer umatlas   1781760 Oct 12 03:17 result.tar.gz
03:17:26 (2632386): run_atlas exited; CPU time 43223.521464
03:17:26 (2632386): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN