Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:04:07 (3720309): wrapper (7.7.26015): starting
16:04:07 (3720309): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 16:04:07] Arguments: --nthreads 8
[2025-10-12 16:04:07] Threads: 8
[2025-10-12 16:04:07] Checking for CVMFS
[2025-10-12 16:04:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 16:04:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 16:04:28] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 16:04:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 16:04:30] 2.13.2.0 129212 116432 118452 151635 2 331 24131377 39288832 8027 16776704 1 63069042 99.671 54957647 36678 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 16:04:30] CVMFS is ok
[2025-10-12 16:04:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 16:04:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 16:04:30] Further information can be found at the LHC@home message board.
[2025-10-12 16:04:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 16:04:30] Checking for apptainer binary...
[2025-10-12 16:04:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 16:04:30] Running /usr/bin/apptainer --version
[2025-10-12 16:04:30] apptainer version 1.4.3-1.el9
[2025-10-12 16:04:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 16:04:31] c-211-16.aglt2.org
[2025-10-12 16:04:31] apptainer works
[2025-10-12 16:04:31] Set ATHENA_PROC_NUMBER=8
[2025-10-12 16:04:31] Set ATHENA_CORE_NUMBER=8
[2025-10-12 16:04:31] Starting ATLAS job with PandaID=6838452575
[2025-10-12 16:04:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 00:04:51]  *** The last 200 lines of the pilot log: ***
[2025-10-13 00:04:51] 2025-10-13 02:05:54,558 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 00:04:51] 2025-10-13 02:05:54,566 | INFO     | fitting pss+swap vs Time
[2025-10-13 00:04:51] 2025-10-13 02:05:54,567 | INFO     | sum of square deviations: 13523388435.9887
[2025-10-13 00:04:51] 2025-10-13 02:05:54,570 | INFO     | sum of deviations: 24535520594.022697
[2025-10-13 00:04:51] 2025-10-13 02:05:54,571 | INFO     | mean x: 1760310401.3693182
[2025-10-13 00:04:51] 2025-10-13 02:05:54,571 | INFO     | mean y: 2535060.7613636362
[2025-10-13 00:04:51] 2025-10-13 02:05:54,571 | INFO     | -- intersect: -3191200910.744924
[2025-10-13 00:04:51] 2025-10-13 02:05:54,571 | INFO     | intersect: -3191200910.744924
[2025-10-13 00:04:51] 2025-10-13 02:05:54,572 | INFO     | chi2: 2.6371945181643777
[2025-10-13 00:04:51] 2025-10-13 02:05:54,573 | INFO     | sum of square deviations: 12955300800.9165
[2025-10-13 00:04:51] 2025-10-13 02:05:54,576 | INFO     | sum of deviations: 46684211527.67436
[2025-10-13 00:04:51] 2025-10-13 02:05:54,577 | INFO     | mean x: 1760310248.8789625
[2025-10-13 00:04:51] 2025-10-13 02:05:54,577 | INFO     | mean y: 2540936.8731988473
[2025-10-13 00:04:51] 2025-10-13 02:05:54,577 | INFO     | -- intersect: -6340707844.134263
[2025-10-13 00:04:51] 2025-10-13 02:05:54,577 | INFO     | intersect: -6340707844.134263
[2025-10-13 00:04:51] 2025-10-13 02:05:54,578 | INFO     | chi2: 1.9540920458743627
[2025-10-13 00:04:51] 2025-10-13 02:05:54,578 | INFO     | current chi2=1.9540920458743627 (change=25.90261990857956 %)
[2025-10-13 00:04:51] 2025-10-13 02:05:54,578 | INFO     | sum of square deviations: 12403226001.839254
[2025-10-13 00:04:51] 2025-10-13 02:05:54,582 | INFO     | sum of deviations: 46020053943.98245
[2025-10-13 00:04:51] 2025-10-13 02:05:54,582 | INFO     | mean x: 1760310096.371345
[2025-10-13 00:04:51] 2025-10-13 02:05:54,582 | INFO     | mean y: 2540753.3859649124
[2025-10-13 00:04:51] 2025-10-13 02:05:54,583 | INFO     | -- intersect: -6528789529.649551
[2025-10-13 00:04:51] 2025-10-13 02:05:54,583 | INFO     | intersect: -6528789529.649551
[2025-10-13 00:04:51] 2025-10-13 02:05:54,583 | INFO     | chi2: 1.9546801817559512
[2025-10-13 00:04:51] 2025-10-13 02:05:54,584 | INFO     | current chi2=1.9546801817559512 (change=-0.030097654961043344 %)
[2025-10-13 00:04:51] 2025-10-13 02:05:54,584 | INFO     | right removable region: 341
[2025-10-13 00:04:51] 2025-10-13 02:05:54,585 | INFO     | sum of square deviations: 12955135612.155567
[2025-10-13 00:04:51] 2025-10-13 02:05:54,588 | INFO     | sum of deviations: -44109537572.95964
[2025-10-13 00:04:51] 2025-10-13 02:05:54,589 | INFO     | mean x: 1760310553.8818443
[2025-10-13 00:04:51] 2025-10-13 02:05:54,589 | INFO     | mean y: 2553385.561959654
[2025-10-13 00:04:51] 2025-10-13 02:05:54,589 | INFO     | -- intersect: 5996044063.00993
[2025-10-13 00:04:51] 2025-10-13 02:05:54,589 | INFO     | intersect: 5996044063.00993
[2025-10-13 00:04:51] 2025-10-13 02:05:54,590 | INFO     | chi2: 0.7362065866855146
[2025-10-13 00:04:51] 2025-10-13 02:05:54,590 | INFO     | current chi2=0.7362065866855146 (change=72.08372072614682 %)
[2025-10-13 00:04:51] 2025-10-13 02:05:54,590 | INFO     | sum of square deviations: 12403064717.277782
[2025-10-13 00:04:51] 2025-10-13 02:05:54,594 | INFO     | sum of deviations: -46672003906.77777
[2025-10-13 00:04:51] 2025-10-13 02:05:54,594 | INFO     | mean x: 1760310706.3888888
[2025-10-13 00:04:51] 2025-10-13 02:05:54,594 | INFO     | mean y: 2554089.847953216
[2025-10-13 00:04:51] 2025-10-13 02:05:54,594 | INFO     | -- intersect: 6626499867.642522
[2025-10-13 00:04:51] 2025-10-13 02:05:54,594 | INFO     | intersect: 6626499867.642522
[2025-10-13 00:04:51] 2025-10-13 02:05:54,595 | INFO     | chi2: 0.7282868584079182
[2025-10-13 00:04:51] 2025-10-13 02:05:54,596 | INFO     | current chi2=0.7282868584079182 (change=1.0757480876735936 %)
[2025-10-13 00:04:51] 2025-10-13 02:05:54,596 | INFO     | left removable region: 20
[2025-10-13 00:04:51] 2025-10-13 02:05:54,596 | INFO     | sum of square deviations: 10255722355.239868
[2025-10-13 00:04:51] 2025-10-13 02:05:54,599 | INFO     | sum of deviations: -22901595191.2617
[2025-10-13 00:04:51] 2025-10-13 02:05:54,600 | INFO     | mean x: 1760310675.8660436
[2025-10-13 00:04:51] 2025-10-13 02:05:54,600 | INFO     | mean y: 2560287.691588785
[2025-10-13 00:04:51] 2025-10-13 02:05:54,600 | INFO     | -- intersect: 3933431377.327042
[2025-10-13 00:04:51] 2025-10-13 02:05:54,600 | INFO     | intersect: 3933431377.327042
[2025-10-13 00:04:51] 2025-10-13 02:05:54,601 | INFO     | chi2: 0.03038062027630241
[2025-10-13 00:04:51] 2025-10-13 02:05:54,601 | INFO     | -- intersect: 3933431377.327042
[2025-10-13 00:04:51] 2025-10-13 02:05:54,601 | INFO     | current memory leak: -2.23 B/s (using 321 data points, chi2=0.03)
[2025-10-13 00:04:51] 2025-10-13 02:05:54,602 | INFO     | could have reported an average CPU frequency of 2600 MHz (15 samples)
[2025-10-13 00:04:51] 2025-10-13 02:05:54,602 | INFO     | ..............................
[2025-10-13 00:04:51] 2025-10-13 02:05:54,602 | INFO     | . Timing measurements:
[2025-10-13 00:04:51] 2025-10-13 02:05:54,602 | INFO     | . get job = 0 s
[2025-10-13 00:04:51] 2025-10-13 02:05:54,603 | INFO     | . initial setup = 4 s
[2025-10-13 00:04:51] 2025-10-13 02:05:54,603 | INFO     | . payload setup = 48 s
[2025-10-13 00:04:51] 2025-10-13 02:05:54,603 | INFO     | . stage-in = 0 s
[2025-10-13 00:04:51] 2025-10-13 02:05:54,603 | INFO     | . payload execution = 21488 s
[2025-10-13 00:04:51] 2025-10-13 02:05:54,603 | INFO     | . stage-out = 2 s
[2025-10-13 00:04:51] 2025-10-13 02:05:54,603 | INFO     | . log creation = 0 s
[2025-10-13 00:04:51] 2025-10-13 02:05:54,603 | INFO     | ..............................
[2025-10-13 00:04:51] 2025-10-13 02:05:54,712 | INFO     | 
[2025-10-13 00:04:51] 2025-10-13 02:05:54,712 | INFO     | job summary report
[2025-10-13 00:04:51] 2025-10-13 02:05:54,712 | INFO     | --------------------------------------------------
[2025-10-13 00:04:51] 2025-10-13 02:05:54,712 | INFO     | PanDA job id: 6838452575
[2025-10-13 00:04:51] 2025-10-13 02:05:54,712 | INFO     | task id: 46676269
[2025-10-13 00:04:51] 2025-10-13 02:05:54,712 | INFO     | errors: (none)
[2025-10-13 00:04:51] 2025-10-13 02:05:54,713 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 00:04:51] 2025-10-13 02:05:54,713 | INFO     | pilot state: finished 
[2025-10-13 00:04:51] 2025-10-13 02:05:54,713 | INFO     | transexitcode: 0
[2025-10-13 00:04:51] 2025-10-13 02:05:54,713 | INFO     | exeerrorcode: 0
[2025-10-13 00:04:51] 2025-10-13 02:05:54,713 | INFO     | exeerrordiag: 
[2025-10-13 00:04:51] 2025-10-13 02:05:54,713 | INFO     | exitcode: 0
[2025-10-13 00:04:51] 2025-10-13 02:05:54,713 | INFO     | exitmsg: OK
[2025-10-13 00:04:51] 2025-10-13 02:05:54,713 | INFO     | cpuconsumptiontime: 55987 s
[2025-10-13 00:04:51] 2025-10-13 02:05:54,713 | INFO     | nevents: 400
[2025-10-13 00:04:51] 2025-10-13 02:05:54,713 | INFO     | neventsw: 0
[2025-10-13 00:04:51] 2025-10-13 02:05:54,714 | INFO     | pid: 3733258
[2025-10-13 00:04:51] 2025-10-13 02:05:54,714 | INFO     | pgrp: 3733258
[2025-10-13 00:04:51] 2025-10-13 02:05:54,714 | INFO     | corecount: 8
[2025-10-13 00:04:51] 2025-10-13 02:05:54,714 | INFO     | event service: False
[2025-10-13 00:04:51] 2025-10-13 02:05:54,714 | INFO     | sizes: {0: 2348029, 1: 2348714, 2: 2348742, 3: 2348941, 15: 2348941, 26: 2348969, 35: 2349387, 37: 2349415, 21542: 2383311, 21545: 2392365, 21557: 2392503}
[2025-10-13 00:04:51] 2025-10-13 02:05:54,714 | INFO     | --------------------------------------------------
[2025-10-13 00:04:51] 2025-10-13 02:05:54,714 | INFO     | 
[2025-10-13 00:04:51] 2025-10-13 02:05:54,714 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 00:04:51] 2025-10-13 02:05:54,735 | INFO     | time since job start (21622s) is within the limit (172800.0s)
[2025-10-13 00:04:51] 2025-10-13 02:05:54,753 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 00:04:51] 2025-10-13 02:05:54,753 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 00:04:51] 2025-10-13 02:05:54,753 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 00:04:51] 2025-10-13 02:05:54,754 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 00:04:51] 2025-10-13 02:05:54,754 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 00:04:51] 2025-10-13 02:05:54,754 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 00:04:51] 2025-10-13 02:05:54,754 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 00:04:51] 2025-10-13 02:05:54,754 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 00:04:51] 2025-10-13 02:05:54,754 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 00:04:51] 2025-10-13 02:05:54,754 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 00:04:51] 2025-10-13 02:05:54,754 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 00:04:51] 2025-10-13 02:05:54,755 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 00:04:51] 2025-10-13 02:05:54,755 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 00:04:51] 2025-10-13 02:05:54,755 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 00:04:51] 2025-10-13 02:05:54,755 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 00:04:51] 2025-10-13 02:05:54,755 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 00:04:51] 2025-10-13 02:05:54,755 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 00:04:51] 2025-10-13 02:05:54,756 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 00:04:51] 2025-10-13 02:05:54,756 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 00:04:51] 2025-10-13 02:05:54,756 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 00:04:51] 2025-10-13 02:05:54,756 | INFO     | job 6838452575 has completed (purged errors)
[2025-10-13 00:04:51] 2025-10-13 02:05:54,756 | INFO     | overall cleanup function is called
[2025-10-13 00:04:51] 2025-10-13 02:05:55,777 | INFO     | --- collectZombieJob: --- 10, [3733258]
[2025-10-13 00:04:51] 2025-10-13 02:05:55,778 | INFO     | zombie collector waiting for pid 3733258
[2025-10-13 00:04:51] 2025-10-13 02:05:55,778 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 00:04:51] 2025-10-13 02:05:55,778 | INFO     | collected zombie processes
[2025-10-13 00:04:51] 2025-10-13 02:05:55,778 | INFO     | will attempt to kill all subprocesses of pid=3733258
[2025-10-13 00:04:51] 2025-10-13 02:05:56,692 | INFO     | PID=3724491 has CPU usage=11.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-13 00:04:51] 2025-10-13 02:05:56,693 | INFO     | .. there are 7 such processes running
[2025-10-13 00:04:51] 2025-10-13 02:05:56,695 | INFO     | process IDs to be killed: [3733258] (in reverse order)
[2025-10-13 00:04:51] 2025-10-13 02:05:56,768 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 00:04:51] 2025-10-13 02:05:56,769 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 00:04:51] 2025-10-13 02:05:56,777 | INFO     | did not find any defunct processes belonging to 3733258
[2025-10-13 00:04:51] 2025-10-13 02:05:56,785 | INFO     | did not find any defunct processes belonging to 3733258
[2025-10-13 00:04:51] 2025-10-13 02:05:56,786 | INFO     | ready for new job
[2025-10-13 00:04:51] 2025-10-13 02:05:56,786 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 00:04:51] 2025-10-13 02:05:56,789 | INFO     | ***************************************
[2025-10-13 00:04:51] 2025-10-13 02:05:56,789 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 00:04:51] 2025-10-13 02:05:56,789 | INFO     | ***************************************
[2025-10-13 00:04:51] 2025-10-13 02:05:56,789 | INFO     | 
[2025-10-13 00:04:51] 2025-10-13 02:05:56,791 | INFO     | architecture information:
[2025-10-13 00:04:51] 2025-10-13 02:05:56,792 | INFO     | executing command: cat /etc/os-release
[2025-10-13 00:04:51] 2025-10-13 02:05:56,814 | INFO     | cat /etc/os-release:
[2025-10-13 00:04:51] NAME="CentOS Linux"
[2025-10-13 00:04:51] VERSION="7 (Core)"
[2025-10-13 00:04:51] ID="centos"
[2025-10-13 00:04:51] ID_LIKE="rhel fedora"
[2025-10-13 00:04:51] VERSION_ID="7"
[2025-10-13 00:04:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 00:04:51] ANSI_COLOR="0;31"
[2025-10-13 00:04:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 00:04:51] HOME_URL="https://www.centos.org/"
[2025-10-13 00:04:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 00:04:51] 
[2025-10-13 00:04:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 00:04:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 00:04:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 00:04:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 00:04:51] 
[2025-10-13 00:04:51] 2025-10-13 02:05:56,814 | INFO     | ***************************************
[2025-10-13 00:04:51] 2025-10-13 02:05:57,317 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 00:04:51] 2025-10-13 02:05:57,368 | INFO     | sufficient remaining disk space (52896464896 B)
[2025-10-13 00:04:51] 2025-10-13 02:05:57,369 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 00:04:51] 2025-10-13 02:05:57,369 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 00:04:51] 2025-10-13 02:05:57,369 | INFO     | update_server=False
[2025-10-13 00:04:51] 2025-10-13 02:05:57,369 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 00:04:51] 2025-10-13 02:05:57,370 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-13 00:04:51] 2025-10-13 02:05:57,370 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 00:04:51] 2025-10-13 02:05:57,370 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 00:04:51] 2025-10-13 02:05:57,370 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 00:04:51] 2025-10-13 02:05:57,370 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 00:04:51] 2025-10-13 02:05:57,505 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 00:04:51] 2025-10-13 02:05:57,506 | INFO     | aborting loop
[2025-10-13 00:04:51] 2025-10-13 02:05:57,520 | INFO     | all payload control threads have been joined
[2025-10-13 00:04:51] 2025-10-13 02:05:57,791 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 00:04:51] 2025-10-13 02:05:58,048 | INFO     | all data control threads have been joined
[2025-10-13 00:04:51] 2025-10-13 02:05:58,376 | INFO     | [job] retrieve thread has finished
[2025-10-13 00:04:51] 2025-10-13 02:05:58,511 | INFO     | [job] job monitor thread has finished
[2025-10-13 00:04:51] 2025-10-13 02:05:58,537 | INFO     | [payload] control thread has finished
[2025-10-13 00:04:51] 2025-10-13 02:05:58,611 | INFO     | [data] copytool_in thread has finished
[2025-10-13 00:04:51] 2025-10-13 02:05:59,054 | INFO     | [data] control thread has finished
[2025-10-13 00:04:51] 2025-10-13 02:05:59,071 | INFO     | all job control threads have been joined
[2025-10-13 00:04:51] 2025-10-13 02:05:59,176 | INFO     | [job] validate thread has finished
[2025-10-13 00:04:51] 2025-10-13 02:05:59,193 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 00:04:51] 2025-10-13 02:05:59,486 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 00:04:51] 2025-10-13 02:05:59,537 | INFO     | [payload] validate_post thread has finished
[2025-10-13 00:04:51] 2025-10-13 02:05:59,627 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 00:04:51] 2025-10-13 02:05:59,710 | INFO     | [payload] failed_post thread has finished
[2025-10-13 00:04:51] 2025-10-13 02:05:59,726 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 00:04:51] 2025-10-13 02:05:59,793 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 00:04:51] 2025-10-13 02:05:59,798 | INFO     | [data] copytool_out thread has finished
[2025-10-13 00:04:51] 2025-10-13 02:06:00,077 | INFO     | [job] control thread has finished
[2025-10-13 00:04:51] 2025-10-13 02:06:00,732 | INFO     | [job] queue monitor thread has finished
[2025-10-13 00:04:51] 2025-10-13 02:06:01,379 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 00:04:51] 2025-10-13 02:06:09,832 | INFO     | [monitor] cgroup control has ended
[2025-10-13 00:04:51] 2025-10-13 02:06:10,839 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140398706661184)>', '<ExcThread(monitor, started 140398353692416)>']
[2025-10-13 00:04:51] 2025-10-13 02:06:11,454 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 00:04:51] 2025-10-13 02:06:11,455 | INFO     | [monitor] control thread has ended
[2025-10-13 00:04:51] 2025-10-13 02:06:15,866 | INFO     | all workflow threads have been joined
[2025-10-13 00:04:51] 2025-10-13 02:06:15,867 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 00:04:51] 2025-10-13 02:06:15,868 | INFO     | traces error code: 0
[2025-10-13 00:04:51] 2025-10-13 02:06:15,868 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 00:04:51] 2025-10-13 02:06:16,350 [wrapper] ==== pilot stdout END ====
[2025-10-13 00:04:51] 2025-10-13 02:06:16,376 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 00:04:51] 2025-10-13 02:06:16,380 [wrapper] pilotpid: 3724491
[2025-10-13 00:04:51] 2025-10-13 02:06:16,384 [wrapper] Pilot exit status: 0
[2025-10-13 00:04:51] 2025-10-13 02:06:16,410 [wrapper] pandaids: 6838452575
[2025-10-13 00:04:51] 2025-10-13 02:06:16,506 [wrapper] cleanup supervisor_pilot 4157914 3724492
[2025-10-13 00:04:51] 2025-10-13 02:06:16,530 [wrapper] Test setup, not cleaning
[2025-10-13 00:04:51] 2025-10-13 02:06:16,539 [wrapper] apfmon messages muted
[2025-10-13 00:04:51] 2025-10-13 02:06:16,569 [wrapper] ==== wrapper stdout END ====
[2025-10-13 00:04:51] 2025-10-13 02:06:16,593 [wrapper] ==== wrapper stderr END ====
[2025-10-13 00:04:51]  *** Error codes and diagnostics ***
[2025-10-13 00:04:51]     "exeErrorCode": 0,
[2025-10-13 00:04:51]     "exeErrorDiag": "",
[2025-10-13 00:04:51]     "pilotErrorCode": 0,
[2025-10-13 00:04:51]     "pilotErrorDiag": "",
[2025-10-13 00:04:51]  *** Listing of results directory ***
[2025-10-13 00:04:51] total 415760
[2025-10-13 00:04:51] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 09:40 pilot3.tar.gz
[2025-10-13 00:04:51] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 09:45 queuedata.json
[2025-10-13 00:04:51] -rwx------. 1 boincer umatlas     36292 Oct 11 09:46 runpilot2-wrapper.sh
[2025-10-13 00:04:51] -rw-r--r--. 1 boincer umatlas       100 Oct 12 16:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 00:04:51] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 16:04 run_atlas
[2025-10-13 00:04:51] -rw-r--r--. 1 boincer umatlas       105 Oct 12 16:04 job.xml
[2025-10-13 00:04:51] -rw-r--r--. 2 boincer umatlas 221469314 Oct 12 16:04 EVNT.46676267._002349.pool.root.1
[2025-10-13 00:04:51] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 16:04 start_atlas.sh
[2025-10-13 00:04:51] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 16:04 shared
[2025-10-13 00:04:51] -rw-r--r--. 2 boincer umatlas    569686 Oct 12 16:04 input.tar.gz
[2025-10-13 00:04:51] -rw-r--r--. 1 boincer umatlas         0 Oct 12 16:04 boinc_lockfile
[2025-10-13 00:04:51] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 16:04 pandaJob.out
[2025-10-13 00:04:51] -rw-------. 1 boincer umatlas    975536 Oct 12 16:05 agis_schedconf.cvmfs.json
[2025-10-13 00:04:51] drwx------. 5 boincer umatlas      4096 Oct 12 16:05 pilot3
[2025-10-13 00:04:51] -rw-------. 1 boincer umatlas 193761726 Oct 12 22:04 HITS.46676269._058577.pool.root.1
[2025-10-13 00:04:51] -rw-r--r--. 1 boincer umatlas       530 Oct 12 22:04 boinc_task_state.xml
[2025-10-13 00:04:51] -rw-------. 1 boincer umatlas        95 Oct 12 22:05 pilot_heartbeat.json
[2025-10-13 00:04:51] -rw-------. 1 boincer umatlas      1041 Oct 12 22:05 memory_monitor_summary.json
[2025-10-13 00:04:51] -rw-------. 1 boincer umatlas   1560580 Oct 12 22:05 agis_ddmendpoints.agis.ALL.json
[2025-10-13 00:04:51] -rw-------. 1 boincer umatlas    542500 Oct 12 22:05 log.46676269._058577.job.log.tgz.1
[2025-10-13 00:04:51] -rw-------. 1 boincer umatlas      7826 Oct 12 22:05 heartbeat.json
[2025-10-13 00:04:51] -rw-------. 1 boincer umatlas      4552 Oct 12 22:06 pilotlog.txt
[2025-10-13 00:04:51] -rw-------. 1 boincer umatlas   2760750 Oct 12 22:06 log.46676269._058577.job.log.1
[2025-10-13 00:04:51] -rw-------. 1 boincer umatlas       357 Oct 12 22:06 output.list
[2025-10-13 00:04:51] -rw-r--r--. 1 boincer umatlas       620 Oct 12 22:06 runtime_log
[2025-10-13 00:04:51] -rw-------. 1 boincer umatlas   3317760 Oct 12 22:06 result.tar.gz
[2025-10-13 00:04:51] -rw-r--r--. 1 boincer umatlas      8704 Oct 12 22:06 runtime_log.err
[2025-10-13 00:04:51] -rw-------. 1 boincer umatlas       657 Oct 12 22:06 L6AMDmr6oR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmH0RMDm0JwKhn.diag
[2025-10-13 00:04:51] -rw-r--r--. 1 boincer umatlas        27 Oct 13 00:04 wrapper_checkpoint.txt
[2025-10-13 00:04:51] -rw-r--r--. 1 boincer umatlas      6661 Oct 13 00:04 init_data.xml
[2025-10-13 00:04:51] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 00:04 boinc_mmap_file
[2025-10-13 00:04:51] -rw-r--r--. 1 boincer umatlas     21081 Oct 13 00:04 stderr.txt
[2025-10-13 00:04:51] HITS file was successfully produced:
[2025-10-13 00:04:51] -rw-------. 1 boincer umatlas 193761726 Oct 12 22:04 shared/HITS.pool.root.1
[2025-10-13 00:04:51]  *** Contents of shared directory: ***
[2025-10-13 00:04:51] total 409324
[2025-10-13 00:04:51] -rw-r--r--. 2 boincer umatlas 221469314 Oct 12 16:04 ATLAS.root_0
[2025-10-13 00:04:51] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 16:04 start_atlas.sh
[2025-10-13 00:04:51] -rw-r--r--. 2 boincer umatlas    569686 Oct 12 16:04 input.tar.gz
[2025-10-13 00:04:51] -rw-------. 1 boincer umatlas 193761726 Oct 12 22:04 HITS.pool.root.1
[2025-10-13 00:04:51] -rw-------. 1 boincer umatlas   3317760 Oct 12 22:06 result.tar.gz
00:04:52 (3720309): run_atlas exited; CPU time 56392.277734
00:04:52 (3720309): called boinc_finish(0)

</stderr_txt>
]]>

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