Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:46 (3113021): wrapper (7.7.26015): starting
00:03:46 (3113021): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 00:03:46] Arguments: --nthreads 12
[2025-10-12 00:03:46] Threads: 12
[2025-10-12 00:03:46] Checking for CVMFS
[2025-10-12 00:03:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 00:03:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 00:03:46] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 00:03:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 00:03:48] 2.13.2.0 2533812 128737 328316 151606 0 715 18702712 32935936 47346 16776704 0 369018143 99.696 278495800 19903 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 00:03:48] CVMFS is ok
[2025-10-12 00:03:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 00:03:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 00:03:48] Further information can be found at the LHC@home message board.
[2025-10-12 00:03:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 00:03:48] Checking for apptainer binary...
[2025-10-12 00:03:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 00:03:48] Running /usr/bin/apptainer --version
[2025-10-12 00:03:48] apptainer version 1.4.3-1.el9
[2025-10-12 00:03:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 00:03:48] c6-12-29-3.aglt2.org
[2025-10-12 00:03:48] apptainer works
[2025-10-12 00:03:48] Set ATHENA_PROC_NUMBER=12
[2025-10-12 00:03:48] Set ATHENA_CORE_NUMBER=12
[2025-10-12 00:03:49] Starting ATLAS job with PandaID=6838772219
[2025-10-12 00:03:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
02:40:08 (3113021): BOINC client no longer exists - exiting
02:40:08 (3113021): timer handler: client dead, exiting
02:47:47 (3753971): wrapper (7.7.26015): starting
02:47:47 (3753971): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 02:47:47] Arguments: --nthreads 8
[2025-10-12 02:47:47] Threads: 8
[2025-10-12 02:47:47] This job has been restarted, cleaning up previous attempt
[2025-10-12 02:47:47] Checking for CVMFS
[2025-10-12 02:47:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 02:47:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 02:47:49] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 02:47:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 02:47:50] 2.13.2.0 2533812 128901 302236 151611 1 160 19341602 32935937 40969 16776704 0 369708920 99.697 278663850 19901 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 02:47:50] CVMFS is ok
[2025-10-12 02:47:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 02:47:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 02:47:50] Further information can be found at the LHC@home message board.
[2025-10-12 02:47:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 02:47:50] Checking for apptainer binary...
[2025-10-12 02:47:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 02:47:50] Running /usr/bin/apptainer --version
[2025-10-12 02:47:50] apptainer version 1.4.3-1.el9
[2025-10-12 02:47:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 02:47:50] c6-12-29-3.aglt2.org
[2025-10-12 02:47:50] apptainer works
[2025-10-12 02:47:50] Set ATHENA_PROC_NUMBER=8
[2025-10-12 02:47:50] Set ATHENA_CORE_NUMBER=8
[2025-10-12 02:47:51] Starting ATLAS job with PandaID=6838772219
[2025-10-12 02:47:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 07:22:26]  *** The last 200 lines of the pilot log: ***
[2025-10-12 07:22:26] 2025-10-12 11:21:24,710 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 07:22:26] 2025-10-12 11:21:24,711 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 07:22:26] 2025-10-12 11:21:24,711 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 07:22:26] 2025-10-12 11:21:24,752 | INFO     | fitting pss+swap vs Time
[2025-10-12 07:22:26] 2025-10-12 11:21:24,753 | INFO     | sum of square deviations: 5835925238.781951
[2025-10-12 07:22:26] 2025-10-12 11:21:24,759 | INFO     | sum of deviations: 30112934304.33075
[2025-10-12 07:22:26] 2025-10-12 11:21:24,759 | INFO     | mean x: 1760259949.0676692
[2025-10-12 07:22:26] 2025-10-12 11:21:24,760 | INFO     | mean y: 2060908.7593984962
[2025-10-12 07:22:26] 2025-10-12 11:21:24,760 | INFO     | -- intersect: -9080747735.287352
[2025-10-12 07:22:26] 2025-10-12 11:21:24,760 | INFO     | intersect: -9080747735.287352
[2025-10-12 07:22:26] 2025-10-12 11:21:24,760 | INFO     | chi2: 4.260034465960462
[2025-10-12 07:22:26] 2025-10-12 11:21:24,761 | INFO     | sum of square deviations: 5512984313.938707
[2025-10-12 07:22:26] 2025-10-12 11:21:24,763 | INFO     | sum of deviations: 60141161126.89656
[2025-10-12 07:22:26] 2025-10-12 11:21:24,767 | INFO     | mean x: 1760259796.5708811
[2025-10-12 07:22:26] 2025-10-12 11:21:24,767 | INFO     | mean y: 2074946.2758620689
[2025-10-12 07:22:26] 2025-10-12 11:21:24,767 | INFO     | -- intersect: -19200604042.508305
[2025-10-12 07:22:26] 2025-10-12 11:21:24,767 | INFO     | intersect: -19200604042.508305
[2025-10-12 07:22:26] 2025-10-12 11:21:24,768 | INFO     | chi2: 2.8072034014067464
[2025-10-12 07:22:26] 2025-10-12 11:21:24,768 | INFO     | current chi2=2.8072034014067464 (change=34.10373968010051 %)
[2025-10-12 07:22:26] 2025-10-12 11:21:24,769 | INFO     | sum of square deviations: 5202198828.4375
[2025-10-12 07:22:26] 2025-10-12 11:21:24,770 | INFO     | sum of deviations: 61070491327.125
[2025-10-12 07:22:26] 2025-10-12 11:21:24,771 | INFO     | mean x: 1760259644.078125
[2025-10-12 07:22:26] 2025-10-12 11:21:24,771 | INFO     | mean y: 2075395.84375
[2025-10-12 07:22:26] 2025-10-12 11:21:24,771 | INFO     | -- intersect: -20662248454.97094
[2025-10-12 07:22:26] 2025-10-12 11:21:24,775 | INFO     | intersect: -20662248454.97094
[2025-10-12 07:22:26] 2025-10-12 11:21:24,776 | INFO     | chi2: 2.800930537981661
[2025-10-12 07:22:26] 2025-10-12 11:21:24,776 | INFO     | current chi2=2.800930537981661 (change=0.2234559641079732 %)
[2025-10-12 07:22:26] 2025-10-12 11:21:24,776 | INFO     | right removable region: 255
[2025-10-12 07:22:26] 2025-10-12 11:21:24,776 | INFO     | sum of square deviations: 5512924289.639861
[2025-10-12 07:22:26] 2025-10-12 11:21:24,778 | INFO     | sum of deviations: -23212380764.62069
[2025-10-12 07:22:26] 2025-10-12 11:21:24,778 | INFO     | mean x: 1760260101.5785441
[2025-10-12 07:22:26] 2025-10-12 11:21:24,778 | INFO     | mean y: 2085997.103448276
[2025-10-12 07:22:26] 2025-10-12 11:21:24,779 | INFO     | -- intersect: 7413729178.816774
[2025-10-12 07:22:26] 2025-10-12 11:21:24,779 | INFO     | intersect: 7413729178.816774
[2025-10-12 07:22:26] 2025-10-12 11:21:24,783 | INFO     | chi2: 1.903633595253908
[2025-10-12 07:22:26] 2025-10-12 11:21:24,783 | INFO     | current chi2=1.903633595253908 (change=55.314126905198236 %)
[2025-10-12 07:22:26] 2025-10-12 11:21:24,784 | INFO     | sum of square deviations: 5202063102.933594
[2025-10-12 07:22:26] 2025-10-12 11:21:24,786 | INFO     | sum of deviations: -40344530358.36719
[2025-10-12 07:22:26] 2025-10-12 11:21:24,786 | INFO     | mean x: 1760260254.0898438
[2025-10-12 07:22:26] 2025-10-12 11:21:24,786 | INFO     | mean y: 2094381.3203125
[2025-10-12 07:22:26] 2025-10-12 11:21:24,786 | INFO     | -- intersect: 13653769083.172039
[2025-10-12 07:22:26] 2025-10-12 11:21:24,786 | INFO     | intersect: 13653769083.172039
[2025-10-12 07:22:26] 2025-10-12 11:21:24,786 | INFO     | chi2: 1.6378075747812617
[2025-10-12 07:22:26] 2025-10-12 11:21:24,787 | INFO     | current chi2=1.6378075747812617 (change=13.96413790633855 %)
[2025-10-12 07:22:26] 2025-10-12 11:21:24,787 | INFO     | left removable region: 20
[2025-10-12 07:22:26] 2025-10-12 11:21:24,791 | INFO     | sum of square deviations: 4023965399.5319276
[2025-10-12 07:22:26] 2025-10-12 11:21:24,793 | INFO     | sum of deviations: -5462569410.851064
[2025-10-12 07:22:26] 2025-10-12 11:21:24,793 | INFO     | mean x: 1760260223.6170213
[2025-10-12 07:22:26] 2025-10-12 11:21:24,793 | INFO     | mean y: 2109243.212765957
[2025-10-12 07:22:26] 2025-10-12 11:21:24,793 | INFO     | -- intersect: 2391678411.4234786
[2025-10-12 07:22:26] 2025-10-12 11:21:24,793 | INFO     | intersect: 2391678411.4234786
[2025-10-12 07:22:26] 2025-10-12 11:21:24,794 | INFO     | chi2: 0.13512524197483755
[2025-10-12 07:22:26] 2025-10-12 11:21:24,794 | INFO     | -- intersect: 2391678411.4234786
[2025-10-12 07:22:26] 2025-10-12 11:21:24,794 | INFO     | current memory leak: -1.36 B/s (using 235 data points, chi2=0.14)
[2025-10-12 07:22:26] 2025-10-12 11:21:24,795 | INFO     | could have reported an average CPU frequency of 2594 MHz (12 samples)
[2025-10-12 07:22:26] 2025-10-12 11:21:24,799 | INFO     | ..............................
[2025-10-12 07:22:26] 2025-10-12 11:21:24,799 | INFO     | . Timing measurements:
[2025-10-12 07:22:26] 2025-10-12 11:21:24,799 | INFO     | . get job = 0 s
[2025-10-12 07:22:26] 2025-10-12 11:21:24,800 | INFO     | . initial setup = 2 s
[2025-10-12 07:22:26] 2025-10-12 11:21:24,800 | INFO     | . payload setup = 38 s
[2025-10-12 07:22:26] 2025-10-12 11:21:24,800 | INFO     | . stage-in = 0 s
[2025-10-12 07:22:26] 2025-10-12 11:21:24,800 | INFO     | . payload execution = 16200 s
[2025-10-12 07:22:26] 2025-10-12 11:21:24,800 | INFO     | . stage-out = 4 s
[2025-10-12 07:22:26] 2025-10-12 11:21:24,800 | INFO     | . log creation = 0 s
[2025-10-12 07:22:26] 2025-10-12 11:21:24,800 | INFO     | ..............................
[2025-10-12 07:22:26] 2025-10-12 11:21:25,141 | INFO     | 
[2025-10-12 07:22:26] 2025-10-12 11:21:25,141 | INFO     | job summary report
[2025-10-12 07:22:26] 2025-10-12 11:21:25,141 | INFO     | --------------------------------------------------
[2025-10-12 07:22:26] 2025-10-12 11:21:25,142 | INFO     | PanDA job id: 6838772219
[2025-10-12 07:22:26] 2025-10-12 11:21:25,142 | INFO     | task id: 46676269
[2025-10-12 07:22:26] 2025-10-12 11:21:25,142 | INFO     | errors: (none)
[2025-10-12 07:22:26] 2025-10-12 11:21:25,142 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 07:22:26] 2025-10-12 11:21:25,142 | INFO     | pilot state: finished 
[2025-10-12 07:22:26] 2025-10-12 11:21:25,142 | INFO     | transexitcode: 0
[2025-10-12 07:22:26] 2025-10-12 11:21:25,142 | INFO     | exeerrorcode: 0
[2025-10-12 07:22:26] 2025-10-12 11:21:25,142 | INFO     | exeerrordiag: 
[2025-10-12 07:22:26] 2025-10-12 11:21:25,142 | INFO     | exitcode: 0
[2025-10-12 07:22:26] 2025-10-12 11:21:25,142 | INFO     | exitmsg: OK
[2025-10-12 07:22:26] 2025-10-12 11:21:25,142 | INFO     | cpuconsumptiontime: 47968 s
[2025-10-12 07:22:26] 2025-10-12 11:21:25,142 | INFO     | nevents: 400
[2025-10-12 07:22:26] 2025-10-12 11:21:25,142 | INFO     | neventsw: 0
[2025-10-12 07:22:26] 2025-10-12 11:21:25,142 | INFO     | pid: 3830634
[2025-10-12 07:22:26] 2025-10-12 11:21:25,143 | INFO     | pgrp: 3830634
[2025-10-12 07:22:26] 2025-10-12 11:21:25,143 | INFO     | corecount: 8
[2025-10-12 07:22:26] 2025-10-12 11:21:25,143 | INFO     | event service: False
[2025-10-12 07:22:26] 2025-10-12 11:21:25,143 | INFO     | sizes: {0: 2348029, 1: 2348630, 2: 2348742, 3: 2348913, 4: 2348941, 5: 2348969, 15: 2349153, 27: 2349181, 30: 2349471, 38: 2349499, 16243: 2380654, 16244: 2380933,
[2025-10-12 07:22:26] 2025-10-12 11:21:25,143 | INFO     | --------------------------------------------------
[2025-10-12 07:22:26] 2025-10-12 11:21:25,143 | INFO     | 
[2025-10-12 07:22:26] 2025-10-12 11:21:25,143 | INFO     | executing command: ls -lF /tmp/boinchome/slots/7
[2025-10-12 07:22:26] 2025-10-12 11:21:25,199 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 07:22:26] 2025-10-12 11:21:25,200 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 07:22:26] 2025-10-12 11:21:25,200 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 07:22:26] 2025-10-12 11:21:25,200 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 07:22:26] 2025-10-12 11:21:25,200 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 07:22:26] 2025-10-12 11:21:25,200 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 07:22:26] 2025-10-12 11:21:25,200 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 07:22:26] 2025-10-12 11:21:25,200 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 07:22:26] 2025-10-12 11:21:25,200 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 07:22:26] 2025-10-12 11:21:25,201 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 07:22:26] 2025-10-12 11:21:25,201 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 07:22:26] 2025-10-12 11:21:25,201 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 07:22:26] 2025-10-12 11:21:25,201 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 07:22:26] 2025-10-12 11:21:25,201 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 07:22:26] 2025-10-12 11:21:25,201 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 07:22:26] 2025-10-12 11:21:25,201 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 07:22:26] 2025-10-12 11:21:25,201 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 07:22:26] 2025-10-12 11:21:25,201 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 07:22:26] 2025-10-12 11:21:25,201 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 07:22:26] 2025-10-12 11:21:25,201 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 07:22:26] 2025-10-12 11:21:25,202 | INFO     | job 6838772219 has completed (purged errors)
[2025-10-12 07:22:26] 2025-10-12 11:21:25,202 | INFO     | overall cleanup function is called
[2025-10-12 07:22:26] 2025-10-12 11:21:26,243 | INFO     | --- collectZombieJob: --- 10, [3830634]
[2025-10-12 07:22:26] 2025-10-12 11:21:26,243 | INFO     | zombie collector waiting for pid 3830634
[2025-10-12 07:22:26] 2025-10-12 11:21:26,243 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 07:22:26] 2025-10-12 11:21:26,244 | INFO     | collected zombie processes
[2025-10-12 07:22:26] 2025-10-12 11:21:26,244 | INFO     | will attempt to kill all subprocesses of pid=3830634
[2025-10-12 07:22:26] 2025-10-12 11:21:28,013 | INFO     | process IDs to be killed: [3830634] (in reverse order)
[2025-10-12 07:22:26] 2025-10-12 11:21:29,134 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 07:22:26] 2025-10-12 11:21:29,135 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 07:22:26] 2025-10-12 11:21:29,276 | INFO     | did not find any defunct processes belonging to 3830634
[2025-10-12 07:22:26] 2025-10-12 11:21:29,417 | INFO     | did not find any defunct processes belonging to 3830634
[2025-10-12 07:22:26] 2025-10-12 11:21:29,417 | INFO     | ready for new job
[2025-10-12 07:22:26] 2025-10-12 11:21:29,417 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 07:22:26] 2025-10-12 11:21:29,442 | INFO     | ***************************************
[2025-10-12 07:22:26] 2025-10-12 11:21:29,442 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 07:22:26] 2025-10-12 11:21:29,443 | INFO     | ***************************************
[2025-10-12 07:22:26] 2025-10-12 11:21:29,443 | INFO     | 
[2025-10-12 07:22:26] 2025-10-12 11:21:29,494 | INFO     | architecture information:
[2025-10-12 07:22:26] 2025-10-12 11:21:29,526 | INFO     | executing command: cat /etc/os-release
[2025-10-12 07:22:26] 2025-10-12 11:21:29,610 | INFO     | cat /etc/os-release:
[2025-10-12 07:22:26] NAME="CentOS Linux"
[2025-10-12 07:22:26] VERSION="7 (Core)"
[2025-10-12 07:22:26] ID="centos"
[2025-10-12 07:22:26] ID_LIKE="rhel fedora"
[2025-10-12 07:22:26] VERSION_ID="7"
[2025-10-12 07:22:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 07:22:26] ANSI_COLOR="0;31"
[2025-10-12 07:22:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 07:22:26] HOME_URL="https://www.centos.org/"
[2025-10-12 07:22:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 07:22:26] 
[2025-10-12 07:22:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 07:22:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 07:22:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 07:22:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 07:22:26] 
[2025-10-12 07:22:26] 2025-10-12 11:21:29,611 | INFO     | ***************************************
[2025-10-12 07:22:26] 2025-10-12 11:21:30,114 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2025-10-12 07:22:26] 2025-10-12 11:21:30,213 | INFO     | sufficient remaining disk space (94057267200 B)
[2025-10-12 07:22:26] 2025-10-12 11:21:30,214 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 07:22:26] 2025-10-12 11:21:30,214 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 07:22:26] 2025-10-12 11:21:30,214 | INFO     | update_server=False
[2025-10-12 07:22:26] 2025-10-12 11:21:30,214 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 07:22:26] 2025-10-12 11:21:30,215 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 07:22:26] 2025-10-12 11:21:30,216 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 07:22:26] 2025-10-12 11:21:30,282 | INFO     | all job control threads have been joined
[2025-10-12 07:22:26] 2025-10-12 11:21:30,395 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 07:22:26] 2025-10-12 11:21:30,500 | INFO     | all data control threads have been joined
[2025-10-12 07:22:26] 2025-10-12 11:21:30,705 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 07:22:26] 2025-10-12 11:21:30,705 | INFO     | aborting loop
[2025-10-12 07:22:26] 2025-10-12 11:21:30,800 | INFO     | all payload control threads have been joined
[2025-10-12 07:22:26] 2025-10-12 11:21:31,220 | INFO     | [job] retrieve thread has finished
[2025-10-12 07:22:26] 2025-10-12 11:21:31,222 | INFO     | [job] queue monitor thread has finished
[2025-10-12 07:22:26] 2025-10-12 11:21:31,249 | INFO     | [data] copytool_in thread has finished
[2025-10-12 07:22:26] 2025-10-12 11:21:31,288 | INFO     | [job] control thread has finished
[2025-10-12 07:22:26] 2025-10-12 11:21:31,418 | INFO     | [payload] validate_post thread has finished
[2025-10-12 07:22:26] 2025-10-12 11:21:31,447 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 07:22:26] 2025-10-12 11:21:31,451 | INFO     | [payload] failed_post thread has finished
[2025-10-12 07:22:26] 2025-10-12 11:21:31,506 | INFO     | [data] control thread has finished
[2025-10-12 07:22:26] 2025-10-12 11:21:31,704 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 07:22:26] 2025-10-12 11:21:31,711 | INFO     | [job] job monitor thread has finished
[2025-10-12 07:22:26] 2025-10-12 11:21:31,806 | INFO     | [payload] control thread has finished
[2025-10-12 07:22:26] 2025-10-12 11:21:31,951 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 07:22:26] 2025-10-12 11:21:32,147 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 07:22:26] 2025-10-12 11:21:32,230 | INFO     | [job] validate thread has finished
[2025-10-12 07:22:26] 2025-10-12 11:21:32,402 | INFO     | [data] copytool_out thread has finished
[2025-10-12 07:22:26] 2025-10-12 11:21:34,224 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 07:22:26] 2025-10-12 11:21:59,019 | INFO     | PID=3776842 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 07:22:26] 2025-10-12 11:21:59,019 | INFO     | .. there are 55 such processes running
[2025-10-12 07:22:26] 2025-10-12 11:21:59,020 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 07:22:26] 2025-10-12 11:21:59,020 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 07:22:26] 2025-10-12 11:21:59,020 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 07:22:26] 2025-10-12 11:22:18,317 | INFO     | [monitor] cgroup control has ended
[2025-10-12 07:22:26] 2025-10-12 11:22:20,195 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140104864409408)>', '<ExcThread(monitor, started 140104249112320)>']
[2025-10-12 07:22:26] 2025-10-12 11:22:21,158 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 07:22:26] 2025-10-12 11:22:21,158 | INFO     | [monitor] control thread has ended
[2025-10-12 07:22:26] 2025-10-12 11:22:25,221 | INFO     | all workflow threads have been joined
[2025-10-12 07:22:26] 2025-10-12 11:22:25,221 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 07:22:26] 2025-10-12 11:22:25,222 | INFO     | traces error code: 0
[2025-10-12 07:22:26] 2025-10-12 11:22:25,222 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 07:22:26] 2025-10-12 11:22:25,573 [wrapper] ==== pilot stdout END ====
[2025-10-12 07:22:26] 2025-10-12 11:22:25,589 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 07:22:26] 2025-10-12 11:22:25,608 [wrapper] pilotpid: 3776842
[2025-10-12 07:22:26] 2025-10-12 11:22:25,644 [wrapper] Pilot exit status: 0
[2025-10-12 07:22:26] 2025-10-12 11:22:25,779 [wrapper] pandaids: 6838772219 6838772219
[2025-10-12 07:22:26] 2025-10-12 11:22:26,285 [wrapper] cleanup supervisor_pilot  867082 3776843
[2025-10-12 07:22:26] 2025-10-12 11:22:26,301 [wrapper] Test setup, not cleaning
[2025-10-12 07:22:26] 2025-10-12 11:22:26,315 [wrapper] apfmon messages muted
[2025-10-12 07:22:26] 2025-10-12 11:22:26,396 [wrapper] ==== wrapper stdout END ====
[2025-10-12 07:22:26] 2025-10-12 11:22:26,429 [wrapper] ==== wrapper stderr END ====
[2025-10-12 07:22:26]  *** Error codes and diagnostics ***
[2025-10-12 07:22:26]     "exeErrorCode": 0,
[2025-10-12 07:22:26]     "exeErrorDiag": "",
[2025-10-12 07:22:26]     "pilotErrorCode": 0,
[2025-10-12 07:22:26]     "pilotErrorDiag": "",
[2025-10-12 07:22:26]  *** Listing of results directory ***
[2025-10-12 07:22:26] total 635428
[2025-10-12 07:22:26] drwx------. 5 boincer umatlas      4096 Oct  7 03:00 pilot3
[2025-10-12 07:22:26] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 14:09 queuedata.json
[2025-10-12 07:22:26] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 14:10 pilot3.tar.gz
[2025-10-12 07:22:26] -rwx------. 1 boincer umatlas     36292 Oct 11 14:12 runpilot2-wrapper.sh
[2025-10-12 07:22:26] -rw-r--r--. 1 boincer umatlas       100 Oct 12 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 07:22:26] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 00:03 run_atlas
[2025-10-12 07:22:26] -rw-r--r--. 1 boincer umatlas       105 Oct 12 00:03 job.xml
[2025-10-12 07:22:26] -rw-r--r--. 3 boincer umatlas 222054211 Oct 12 00:03 EVNT.46676267._002500.pool.root.1
[2025-10-12 07:22:26] -rw-r--r--. 3 boincer umatlas 222054211 Oct 12 00:03 ATLAS.root_0
[2025-10-12 07:22:26] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:03 start_atlas.sh
[2025-10-12 07:22:26] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 00:03 shared
[2025-10-12 07:22:26] -rw-r--r--. 2 boincer umatlas    569684 Oct 12 00:03 input.tar.gz
[2025-10-12 07:22:26] -rw-r--r--. 1 boincer umatlas         0 Oct 12 00:03 boinc_lockfile
[2025-10-12 07:22:26] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 02:47 pandaJob.out
[2025-10-12 07:22:26] -rw-------. 1 boincer umatlas    975528 Oct 12 02:48 agis_schedconf.cvmfs.json
[2025-10-12 07:22:26] -rw-------. 1 boincer umatlas 198126861 Oct 12 07:19 HITS.46676269._062280.pool.root.1
[2025-10-12 07:22:26] -rw-r--r--. 1 boincer umatlas       531 Oct 12 07:19 boinc_task_state.xml
[2025-10-12 07:22:26] -rw-r--r--. 1 boincer umatlas      6860 Oct 12 07:20 init_data.xml
[2025-10-12 07:22:26] -rw-------. 1 boincer umatlas      1054 Oct 12 07:20 memory_monitor_summary.json
[2025-10-12 07:22:26] -rw-------. 1 boincer umatlas   1560580 Oct 12 07:20 agis_ddmendpoints.agis.ALL.json
[2025-10-12 07:22:26] -rw-------. 1 boincer umatlas    456796 Oct 12 07:20 log.46676269._062280.job.log.tgz.1
[2025-10-12 07:22:26] -rw-------. 1 boincer umatlas      7851 Oct 12 07:21 heartbeat.json
[2025-10-12 07:22:26] -rw-------. 1 boincer umatlas        96 Oct 12 07:21 pilot_heartbeat.json
[2025-10-12 07:22:26] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 07:22 boinc_mmap_file
[2025-10-12 07:22:26] -rw-r--r--. 1 boincer umatlas        28 Oct 12 07:22 wrapper_checkpoint.txt
[2025-10-12 07:22:26] -rw-------. 1 boincer umatlas      4824 Oct 12 07:22 pilotlog.txt
[2025-10-12 07:22:26] -rw-------. 1 boincer umatlas   1808429 Oct 12 07:22 log.46676269._062280.job.log.1
[2025-10-12 07:22:26] -rw-------. 1 boincer umatlas       357 Oct 12 07:22 output.list
[2025-10-12 07:22:26] -rw-r--r--. 1 boincer umatlas       620 Oct 12 07:22 runtime_log
[2025-10-12 07:22:26] -rw-------. 1 boincer umatlas   2283520 Oct 12 07:22 result.tar.gz
[2025-10-12 07:22:26] -rw-r--r--. 1 boincer umatlas      8799 Oct 12 07:22 runtime_log.err
[2025-10-12 07:22:26] -rw-------. 1 boincer umatlas       786 Oct 12 07:22 L6NODm9FtR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmqLSMDmsGugom.diag
[2025-10-12 07:22:26] -rw-r--r--. 1 boincer umatlas     23312 Oct 12 07:22 stderr.txt
[2025-10-12 07:22:27] HITS file was successfully produced:
[2025-10-12 07:22:27] -rw-------. 1 boincer umatlas 198126861 Oct 12 07:19 shared/HITS.pool.root.1
[2025-10-12 07:22:27]  *** Contents of shared directory: ***
[2025-10-12 07:22:27] total 413152
[2025-10-12 07:22:27] -rw-r--r--. 3 boincer umatlas 222054211 Oct 12 00:03 ATLAS.root_0
[2025-10-12 07:22:27] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:03 start_atlas.sh
[2025-10-12 07:22:27] -rw-r--r--. 2 boincer umatlas    569684 Oct 12 00:03 input.tar.gz
[2025-10-12 07:22:27] -rw-------. 1 boincer umatlas 198126861 Oct 12 07:19 HITS.pool.root.1
[2025-10-12 07:22:27] -rw-------. 1 boincer umatlas   2283520 Oct 12 07:22 result.tar.gz
07:22:29 (3753971): run_atlas exited; CPU time 48854.115377
07:22:29 (3753971): called boinc_finish(0)

</stderr_txt>
]]>

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