Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:09:11 (924868): wrapper (7.7.26015): starting
00:09:11 (924868): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 00:09:11] Arguments: --nthreads 12
[2025-10-12 00:09:11] Threads: 12
[2025-10-12 00:09:11] Checking for CVMFS
[2025-10-12 00:09:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 00:09:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 00:09:13] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 00:09:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 00:09:15] 2.13.2.0 129195 115491 212440 151607 1 176 38283358 39288833 13755 16776704 0 66118272 99.697 52098904 27371 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 00:09:15] CVMFS is ok
[2025-10-12 00:09:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 00:09:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 00:09:15] Further information can be found at the LHC@home message board.
[2025-10-12 00:09:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 00:09:15] Checking for apptainer binary...
[2025-10-12 00:09:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 00:09:15] Running /usr/bin/apptainer --version
[2025-10-12 00:09:15] apptainer version 1.4.3-1.el9
[2025-10-12 00:09:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 00:09:36] c-210-24.aglt2.org
[2025-10-12 00:09:36] apptainer works
[2025-10-12 00:09:37] Set ATHENA_PROC_NUMBER=12
[2025-10-12 00:09:37] Set ATHENA_CORE_NUMBER=12
[2025-10-12 00:09:37] Starting ATLAS job with PandaID=6838850687
[2025-10-12 00:09:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 14:03:32]  *** The last 200 lines of the pilot log: ***
[2025-10-12 14:03:32] 2025-10-12 18:02:54,369 | INFO     | sum of deviations: 1204659323871.1418
[2025-10-12 14:03:32] 2025-10-12 18:02:54,369 | INFO     | mean x: 1760267156.3172839
[2025-10-12 14:03:32] 2025-10-12 18:02:54,369 | INFO     | mean y: 2614698.4469135804
[2025-10-12 14:03:32] 2025-10-12 18:02:54,369 | INFO     | -- intersect: -12867603570.515266
[2025-10-12 14:03:32] 2025-10-12 18:02:54,369 | INFO     | intersect: -12867603570.515266
[2025-10-12 14:03:32] 2025-10-12 18:02:54,382 | INFO     | chi2: 7.128326924972352
[2025-10-12 14:03:32] 2025-10-12 18:02:54,382 | INFO     | current chi2=7.128326924972352 (change=28.367998778402786 %)
[2025-10-12 14:03:32] 2025-10-12 18:02:54,383 | INFO     | sum of square deviations: 161729859203.68192
[2025-10-12 14:03:32] 2025-10-12 18:02:54,478 | INFO     | sum of deviations: 1193523868430.9583
[2025-10-12 14:03:32] 2025-10-12 18:02:54,478 | INFO     | mean x: 1760267003.8372672
[2025-10-12 14:03:32] 2025-10-12 18:02:54,478 | INFO     | mean y: 2614138.3813664597
[2025-10-12 14:03:32] 2025-10-12 18:02:54,478 | INFO     | -- intersect: -12987693861.858322
[2025-10-12 14:03:32] 2025-10-12 18:02:54,479 | INFO     | intersect: -12987693861.858322
[2025-10-12 14:03:32] 2025-10-12 18:02:54,480 | INFO     | chi2: 7.127161669388047
[2025-10-12 14:03:32] 2025-10-12 18:02:54,480 | INFO     | current chi2=7.127161669388047 (change=0.016346831403354238 %)
[2025-10-12 14:03:32] 2025-10-12 18:02:54,480 | INFO     | right removable region: 804
[2025-10-12 14:03:32] 2025-10-12 18:02:54,481 | INFO     | sum of square deviations: 164760161670.72217
[2025-10-12 14:03:32] 2025-10-12 18:02:54,512 | INFO     | sum of deviations: 723123028484.017
[2025-10-12 14:03:32] 2025-10-12 18:02:54,512 | INFO     | mean x: 1760267461.3148148
[2025-10-12 14:03:32] 2025-10-12 18:02:54,512 | INFO     | mean y: 2617347.1567901233
[2025-10-12 14:03:32] 2025-10-12 18:02:54,512 | INFO     | -- intersect: -7723096955.744584
[2025-10-12 14:03:32] 2025-10-12 18:02:54,512 | INFO     | intersect: -7723096955.744584
[2025-10-12 14:03:32] 2025-10-12 18:02:54,513 | INFO     | chi2: 6.441322852318535
[2025-10-12 14:03:32] 2025-10-12 18:02:54,513 | INFO     | current chi2=6.441322852318535 (change=35.27164911452586 %)
[2025-10-12 14:03:32] 2025-10-12 18:02:54,514 | INFO     | sum of square deviations: 161726532039.69434
[2025-10-12 14:03:32] 2025-10-12 18:02:54,547 | INFO     | sum of deviations: 513658682035.5697
[2025-10-12 14:03:32] 2025-10-12 18:02:54,548 | INFO     | mean x: 1760267613.8335404
[2025-10-12 14:03:32] 2025-10-12 18:02:54,548 | INFO     | mean y: 2627875.5788819874
[2025-10-12 14:03:32] 2025-10-12 18:02:54,548 | INFO     | -- intersect: -5588147683.31155
[2025-10-12 14:03:32] 2025-10-12 18:02:54,548 | INFO     | intersect: -5588147683.31155
[2025-10-12 14:03:32] 2025-10-12 18:02:54,560 | INFO     | chi2: 4.387727138144837
[2025-10-12 14:03:32] 2025-10-12 18:02:54,561 | INFO     | current chi2=4.387727138144837 (change=31.88158335262628 %)
[2025-10-12 14:03:32] 2025-10-12 18:02:54,562 | INFO     | sum of square deviations: 158730542015.3952
[2025-10-12 14:03:32] 2025-10-12 18:02:54,609 | INFO     | sum of deviations: 398941545643.49744
[2025-10-12 14:03:32] 2025-10-12 18:02:54,609 | INFO     | mean x: 1760267766.3475
[2025-10-12 14:03:32] 2025-10-12 18:02:54,609 | INFO     | mean y: 2633710.57375
[2025-10-12 14:03:32] 2025-10-12 18:02:54,609 | INFO     | -- intersect: -4421492450.256648
[2025-10-12 14:03:32] 2025-10-12 18:02:54,609 | INFO     | intersect: -4421492450.256648
[2025-10-12 14:03:32] 2025-10-12 18:02:54,611 | INFO     | chi2: 3.774540751124196
[2025-10-12 14:03:32] 2025-10-12 18:02:54,612 | INFO     | current chi2=3.774540751124196 (change=13.975034629885858 %)
[2025-10-12 14:03:32] 2025-10-12 18:02:54,612 | INFO     | left removable region: 30
[2025-10-12 14:03:32] 2025-10-12 18:02:54,613 | INFO     | sum of square deviations: 143749754685.00278
[2025-10-12 14:03:32] 2025-10-12 18:02:54,653 | INFO     | sum of deviations: 403467542444.23505
[2025-10-12 14:03:32] 2025-10-12 18:02:54,653 | INFO     | mean x: 1760267888.4237726
[2025-10-12 14:03:32] 2025-10-12 18:02:54,653 | INFO     | mean y: 2655046.5633074935
[2025-10-12 14:03:32] 2025-10-12 18:02:54,653 | INFO     | -- intersect: -4937951360.3284445
[2025-10-12 14:03:32] 2025-10-12 18:02:54,653 | INFO     | intersect: -4937951360.3284445
[2025-10-12 14:03:32] 2025-10-12 18:02:54,658 | INFO     | chi2: 0.3296708440374121
[2025-10-12 14:03:32] 2025-10-12 18:02:54,659 | INFO     | -- intersect: -4937951360.3284445
[2025-10-12 14:03:32] 2025-10-12 18:02:54,659 | INFO     | current memory leak: 2.81 B/s (using 774 data points, chi2=0.33)
[2025-10-12 14:03:32] 2025-10-12 18:02:54,660 | INFO     | could have reported an average CPU frequency of 2600 MHz (30 samples)
[2025-10-12 14:03:32] 2025-10-12 18:02:54,660 | INFO     | ..............................
[2025-10-12 14:03:32] 2025-10-12 18:02:54,660 | INFO     | . Timing measurements:
[2025-10-12 14:03:32] 2025-10-12 18:02:54,660 | INFO     | . get job = 2 s
[2025-10-12 14:03:32] 2025-10-12 18:02:54,661 | INFO     | . initial setup = 10 s
[2025-10-12 14:03:32] 2025-10-12 18:02:54,661 | INFO     | . payload setup = 69 s
[2025-10-12 14:03:32] 2025-10-12 18:02:54,661 | INFO     | . stage-in = 0 s
[2025-10-12 14:03:32] 2025-10-12 18:02:54,661 | INFO     | . payload execution = 49678 s
[2025-10-12 14:03:32] 2025-10-12 18:02:54,662 | INFO     | . stage-out = 7 s
[2025-10-12 14:03:32] 2025-10-12 18:02:54,662 | INFO     | . log creation = 1 s
[2025-10-12 14:03:32] 2025-10-12 18:02:54,662 | INFO     | ..............................
[2025-10-12 14:03:32] 2025-10-12 18:02:55,510 | INFO     | time since job start (49893s) is within the limit (172800.0s)
[2025-10-12 14:03:32] 2025-10-12 18:02:55,515 | INFO     | 49905s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-12 14:03:32] 2025-10-12 18:02:55,569 | INFO     | 
[2025-10-12 14:03:32] 2025-10-12 18:02:55,569 | INFO     | job summary report
[2025-10-12 14:03:32] 2025-10-12 18:02:55,569 | INFO     | --------------------------------------------------
[2025-10-12 14:03:32] 2025-10-12 18:02:55,569 | INFO     | PanDA job id: 6838850687
[2025-10-12 14:03:32] 2025-10-12 18:02:55,569 | INFO     | task id: 46676269
[2025-10-12 14:03:32] 2025-10-12 18:02:55,570 | INFO     | errors: (none)
[2025-10-12 14:03:32] 2025-10-12 18:02:55,570 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 14:03:32] 2025-10-12 18:02:55,570 | INFO     | pilot state: finished 
[2025-10-12 14:03:32] 2025-10-12 18:02:55,570 | INFO     | transexitcode: 0
[2025-10-12 14:03:32] 2025-10-12 18:02:55,570 | INFO     | exeerrorcode: 0
[2025-10-12 14:03:32] 2025-10-12 18:02:55,570 | INFO     | exeerrordiag: 
[2025-10-12 14:03:32] 2025-10-12 18:02:55,570 | INFO     | exitcode: 0
[2025-10-12 14:03:32] 2025-10-12 18:02:55,570 | INFO     | exitmsg: OK
[2025-10-12 14:03:32] 2025-10-12 18:02:55,570 | INFO     | cpuconsumptiontime: 53278 s
[2025-10-12 14:03:32] 2025-10-12 18:02:55,571 | INFO     | nevents: 400
[2025-10-12 14:03:32] 2025-10-12 18:02:55,571 | INFO     | neventsw: 0
[2025-10-12 14:03:32] 2025-10-12 18:02:55,571 | INFO     | pid: 944111
[2025-10-12 14:03:32] 2025-10-12 18:02:55,571 | INFO     | pgrp: 944111
[2025-10-12 14:03:32] 2025-10-12 18:02:55,571 | INFO     | corecount: 12
[2025-10-12 14:03:32] 2025-10-12 18:02:55,571 | INFO     | event service: False
[2025-10-12 14:03:32] 2025-10-12 18:02:55,571 | INFO     | sizes: {0: 2348029, 1: 2348630, 3: 2348714, 4: 2348770, 5: 2348997, 6: 2348997, 17: 2349153, 28: 2349181, 39: 2349209, 50: 2349237, 55: 2349527, 61: 2349835, 49749
[2025-10-12 14:03:32] 2025-10-12 18:02:55,571 | INFO     | --------------------------------------------------
[2025-10-12 14:03:32] 2025-10-12 18:02:55,571 | INFO     | 
[2025-10-12 14:03:32] 2025-10-12 18:02:55,572 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 14:03:32] 2025-10-12 18:02:55,833 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 14:03:32] 2025-10-12 18:02:55,834 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 14:03:32] 2025-10-12 18:02:55,834 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 14:03:32] 2025-10-12 18:02:55,834 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 14:03:32] 2025-10-12 18:02:55,834 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 14:03:32] 2025-10-12 18:02:55,834 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 14:03:32] 2025-10-12 18:02:55,834 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 14:03:32] 2025-10-12 18:02:55,834 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 14:03:32] 2025-10-12 18:02:55,835 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 14:03:32] 2025-10-12 18:02:55,835 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 14:03:32] 2025-10-12 18:02:55,835 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 14:03:32] 2025-10-12 18:02:55,835 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 14:03:32] 2025-10-12 18:02:55,835 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 14:03:32] 2025-10-12 18:02:55,835 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 14:03:32] 2025-10-12 18:02:55,835 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 14:03:32] 2025-10-12 18:02:55,835 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 14:03:32] 2025-10-12 18:02:55,836 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 14:03:32] 2025-10-12 18:02:55,836 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 14:03:32] 2025-10-12 18:02:55,836 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 14:03:32] 2025-10-12 18:02:55,836 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 14:03:32] 2025-10-12 18:02:55,836 | INFO     | job 6838850687 has completed (purged errors)
[2025-10-12 14:03:32] 2025-10-12 18:02:55,836 | INFO     | overall cleanup function is called
[2025-10-12 14:03:32] 2025-10-12 18:02:56,898 | INFO     | --- collectZombieJob: --- 10, [944111]
[2025-10-12 14:03:32] 2025-10-12 18:02:56,898 | INFO     | zombie collector waiting for pid 944111
[2025-10-12 14:03:32] 2025-10-12 18:02:56,898 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 14:03:32] 2025-10-12 18:02:56,898 | INFO     | collected zombie processes
[2025-10-12 14:03:32] 2025-10-12 18:02:56,898 | INFO     | will attempt to kill all subprocesses of pid=944111
[2025-10-12 14:03:32] 2025-10-12 18:02:59,272 | INFO     | process IDs to be killed: [944111] (in reverse order)
[2025-10-12 14:03:32] 2025-10-12 18:02:59,354 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 14:03:32] 2025-10-12 18:02:59,354 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 14:03:32] 2025-10-12 18:02:59,363 | INFO     | did not find any defunct processes belonging to 944111
[2025-10-12 14:03:32] 2025-10-12 18:02:59,373 | INFO     | did not find any defunct processes belonging to 944111
[2025-10-12 14:03:32] 2025-10-12 18:02:59,373 | INFO     | ready for new job
[2025-10-12 14:03:32] 2025-10-12 18:02:59,374 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 14:03:32] 2025-10-12 18:02:59,377 | INFO     | ***************************************
[2025-10-12 14:03:32] 2025-10-12 18:02:59,378 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 14:03:32] 2025-10-12 18:02:59,378 | INFO     | ***************************************
[2025-10-12 14:03:32] 2025-10-12 18:02:59,378 | INFO     | 
[2025-10-12 14:03:32] 2025-10-12 18:02:59,380 | INFO     | architecture information:
[2025-10-12 14:03:32] 2025-10-12 18:02:59,380 | INFO     | executing command: cat /etc/os-release
[2025-10-12 14:03:32] 2025-10-12 18:02:59,507 | INFO     | cat /etc/os-release:
[2025-10-12 14:03:32] NAME="CentOS Linux"
[2025-10-12 14:03:32] VERSION="7 (Core)"
[2025-10-12 14:03:32] ID="centos"
[2025-10-12 14:03:32] ID_LIKE="rhel fedora"
[2025-10-12 14:03:32] VERSION_ID="7"
[2025-10-12 14:03:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 14:03:32] ANSI_COLOR="0;31"
[2025-10-12 14:03:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 14:03:32] HOME_URL="https://www.centos.org/"
[2025-10-12 14:03:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 14:03:32] 
[2025-10-12 14:03:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 14:03:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 14:03:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 14:03:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 14:03:32] 
[2025-10-12 14:03:32] 2025-10-12 18:02:59,508 | INFO     | ***************************************
[2025-10-12 14:03:32] 2025-10-12 18:03:00,011 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 14:03:32] 2025-10-12 18:03:00,210 | INFO     | sufficient remaining disk space (53247737856 B)
[2025-10-12 14:03:32] 2025-10-12 18:03:00,211 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 14:03:32] 2025-10-12 18:03:00,211 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 14:03:32] 2025-10-12 18:03:00,211 | INFO     | update_server=False
[2025-10-12 14:03:32] 2025-10-12 18:03:00,211 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 14:03:32] 2025-10-12 18:03:00,496 | INFO     | all payload control threads have been joined
[2025-10-12 14:03:32] 2025-10-12 18:03:00,509 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 14:03:32] 2025-10-12 18:03:00,668 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 14:03:32] 2025-10-12 18:03:00,668 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 14:03:32] 2025-10-12 18:03:00,668 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 14:03:32] 2025-10-12 18:03:00,669 | INFO     | will abort loop
[2025-10-12 14:03:32] 2025-10-12 18:03:00,786 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 14:03:32] 2025-10-12 18:03:00,947 | INFO     | all data control threads have been joined
[2025-10-12 14:03:32] 2025-10-12 18:03:01,105 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 14:03:32] 2025-10-12 18:03:01,219 | INFO     | [job] retrieve thread has finished
[2025-10-12 14:03:32] 2025-10-12 18:03:01,332 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 14:03:32] 2025-10-12 18:03:01,431 | INFO     | [job] validate thread has finished
[2025-10-12 14:03:32] 2025-10-12 18:03:01,432 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 14:03:32] 2025-10-12 18:03:01,433 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 14:03:32] 2025-10-12 18:03:01,502 | INFO     | [payload] control thread has finished
[2025-10-12 14:03:32] 2025-10-12 18:03:01,515 | INFO     | [job] queue monitor thread has finished
[2025-10-12 14:03:32] 2025-10-12 18:03:01,557 | INFO     | all job control threads have been joined
[2025-10-12 14:03:32] 2025-10-12 18:03:01,674 | INFO     | [job] job monitor thread has finished
[2025-10-12 14:03:32] 2025-10-12 18:03:01,953 | INFO     | [data] control thread has finished
[2025-10-12 14:03:32] 2025-10-12 18:03:02,139 | INFO     | [monitor] cgroup control has ended
[2025-10-12 14:03:32] 2025-10-12 18:03:02,212 | INFO     | [data] copytool_in thread has finished
[2025-10-12 14:03:32] 2025-10-12 18:03:02,387 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 14:03:32] 2025-10-12 18:03:02,488 | INFO     | [payload] failed_post thread has finished
[2025-10-12 14:03:32] 2025-10-12 18:03:02,563 | INFO     | [job] control thread has finished
[2025-10-12 14:03:32] 2025-10-12 18:03:02,633 | INFO     | [payload] validate_post thread has finished
[2025-10-12 14:03:32] 2025-10-12 18:03:03,114 | INFO     | [data] copytool_out thread has finished
[2025-10-12 14:03:32] 2025-10-12 18:03:04,795 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 14:03:32] 2025-10-12 18:03:05,154 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140368908076864)>', '<ExcThread(monitor, started 140368548964096)>']
[2025-10-12 14:03:32] 2025-10-12 18:03:10,180 | INFO     | all workflow threads have been joined
[2025-10-12 14:03:32] 2025-10-12 18:03:10,180 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 14:03:32] 2025-10-12 18:03:10,180 | INFO     | traces error code: 0
[2025-10-12 14:03:32] 2025-10-12 18:03:10,181 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 14:03:32] 2025-10-12 18:03:29,427 | INFO     | PID=931856 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 14:03:32] 2025-10-12 18:03:29,427 | INFO     | .. there are 14 such processes running
[2025-10-12 14:03:32] 2025-10-12 18:03:29,433 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 14:03:32] 2025-10-12 18:03:29,433 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 14:03:32] 2025-10-12 18:03:29,433 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 14:03:32] 2025-10-12 18:03:29,433 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 14:03:32] 2025-10-12 18:03:29,434 | INFO     | [monitor] control thread has ended
[2025-10-12 14:03:32] 2025-10-12 18:03:30,085 [wrapper] ==== pilot stdout END ====
[2025-10-12 14:03:32] 2025-10-12 18:03:30,139 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 14:03:32] 2025-10-12 18:03:30,203 [wrapper] pilotpid: 931856
[2025-10-12 14:03:32] 2025-10-12 18:03:30,294 [wrapper] Pilot exit status: 0
[2025-10-12 14:03:32] 2025-10-12 18:03:30,530 [wrapper] pandaids: 6838850687
[2025-10-12 14:03:32] 2025-10-12 18:03:31,304 [wrapper] cleanup supervisor_pilot 2339118 931857
[2025-10-12 14:03:32] 2025-10-12 18:03:31,320 [wrapper] Test setup, not cleaning
[2025-10-12 14:03:32] 2025-10-12 18:03:31,342 [wrapper] apfmon messages muted
[2025-10-12 14:03:32] 2025-10-12 18:03:31,374 [wrapper] ==== wrapper stdout END ====
[2025-10-12 14:03:32] 2025-10-12 18:03:31,401 [wrapper] ==== wrapper stderr END ====
[2025-10-12 14:03:32]  *** Error codes and diagnostics ***
[2025-10-12 14:03:32]     "exeErrorCode": 0,
[2025-10-12 14:03:32]     "exeErrorDiag": "",
[2025-10-12 14:03:32]     "pilotErrorCode": 0,
[2025-10-12 14:03:32]     "pilotErrorDiag": "",
[2025-10-12 14:03:32]  *** Listing of results directory ***
[2025-10-12 14:03:32] total 417612
[2025-10-12 14:03:32] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 15:02 pilot3.tar.gz
[2025-10-12 14:03:32] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 15:13 queuedata.json
[2025-10-12 14:03:32] -rwx------. 1 boincer umatlas     36292 Oct 11 15:16 runpilot2-wrapper.sh
[2025-10-12 14:03:32] -rw-r--r--. 1 boincer umatlas       100 Oct 12 00:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 14:03:32] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 00:09 run_atlas
[2025-10-12 14:03:32] -rw-r--r--. 1 boincer umatlas       105 Oct 12 00:09 job.xml
[2025-10-12 14:03:32] -rw-r--r--. 2 boincer umatlas 220476786 Oct 12 00:09 EVNT.46676267._002546.pool.root.1
[2025-10-12 14:03:32] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:09 start_atlas.sh
[2025-10-12 14:03:32] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 00:09 shared
[2025-10-12 14:03:32] -rw-r--r--. 2 boincer umatlas    569683 Oct 12 00:09 input.tar.gz
[2025-10-12 14:03:32] -rw-r--r--. 1 boincer umatlas         0 Oct 12 00:09 boinc_lockfile
[2025-10-12 14:03:32] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 00:09 pandaJob.out
[2025-10-12 14:03:32] -rw-------. 1 boincer umatlas    975512 Oct 12 00:11 agis_schedconf.cvmfs.json
[2025-10-12 14:03:32] drwx------. 5 boincer umatlas      4096 Oct 12 00:11 pilot3
[2025-10-12 14:03:32] -rw-------. 1 boincer umatlas 190069460 Oct 12 13:58 HITS.46676269._063363.pool.root.1
[2025-10-12 14:03:32] -rw-r--r--. 1 boincer umatlas       531 Oct 12 13:58 boinc_task_state.xml
[2025-10-12 14:03:32] -rw-r--r--. 1 boincer umatlas      6661 Oct 12 14:01 init_data.xml
[2025-10-12 14:03:32] -rw-------. 1 boincer umatlas      1054 Oct 12 14:02 memory_monitor_summary.json
[2025-10-12 14:03:32] -rw-------. 1 boincer umatlas   1560580 Oct 12 14:02 agis_ddmendpoints.agis.ALL.json
[2025-10-12 14:03:32] -rw-------. 1 boincer umatlas    931569 Oct 12 14:02 log.46676269._063363.job.log.tgz.1
[2025-10-12 14:03:32] -rw-------. 1 boincer umatlas      7851 Oct 12 14:02 heartbeat.json
[2025-10-12 14:03:32] -rw-r--r--. 1 boincer umatlas        28 Oct 12 14:03 wrapper_checkpoint.txt
[2025-10-12 14:03:32] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 14:03 boinc_mmap_file
[2025-10-12 14:03:32] -rw-------. 1 boincer umatlas        95 Oct 12 14:03 pilot_heartbeat.json
[2025-10-12 14:03:32] -rw-------. 1 boincer umatlas       822 Oct 12 14:03 pilotlog.txt
[2025-10-12 14:03:32] -rw-------. 1 boincer umatlas   5669838 Oct 12 14:03 log.46676269._063363.job.log.1
[2025-10-12 14:03:32] -rw-------. 1 boincer umatlas       357 Oct 12 14:03 output.list
[2025-10-12 14:03:32] -rw-r--r--. 1 boincer umatlas       620 Oct 12 14:03 runtime_log
[2025-10-12 14:03:32] -rw-------. 1 boincer umatlas   6625280 Oct 12 14:03 result.tar.gz
[2025-10-12 14:03:32] -rw-r--r--. 1 boincer umatlas      8706 Oct 12 14:03 runtime_log.err
[2025-10-12 14:03:32] -rw-------. 1 boincer umatlas       663 Oct 12 14:03 e91KDmBGuR8n9Rq4apOajLDm4fhM0noT9bVof3QYDm4QSMDmYGB6mn.diag
[2025-10-12 14:03:32] -rw-r--r--. 1 boincer umatlas      2147 Oct 12 14:03 stderr.txt
[2025-10-12 14:03:32] HITS file was successfully produced:
[2025-10-12 14:03:32] -rw-------. 1 boincer umatlas 190069460 Oct 12 13:58 shared/HITS.pool.root.1
[2025-10-12 14:03:32]  *** Contents of shared directory: ***
[2025-10-12 14:03:32] total 407980
[2025-10-12 14:03:32] -rw-r--r--. 2 boincer umatlas 220476786 Oct 12 00:09 ATLAS.root_0
[2025-10-12 14:03:32] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:09 start_atlas.sh
[2025-10-12 14:03:32] -rw-r--r--. 2 boincer umatlas    569683 Oct 12 00:09 input.tar.gz
[2025-10-12 14:03:32] -rw-------. 1 boincer umatlas 190069460 Oct 12 13:58 HITS.pool.root.1
[2025-10-12 14:03:32] -rw-------. 1 boincer umatlas   6625280 Oct 12 14:03 result.tar.gz
14:03:34 (924868): run_atlas exited; CPU time 54408.931292
14:03:34 (924868): called boinc_finish(0)

</stderr_txt>
]]>

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