Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:00 (2050033): wrapper (7.7.26015): starting
00:01:00 (2050033): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 00:01:00] Arguments: --nthreads 12
[2025-10-12 00:01:00] Threads: 12
[2025-10-12 00:01:00] Checking for CVMFS
[2025-10-12 00:01:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 00:01:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 00:01:03] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 00:01:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 00:01:06] 2.13.2.0 1125174 114703 211396 151606 2 294 22717431 39288832 9755 16776704 2 71522289 99.660 62224062 33337 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 00:01:06] CVMFS is ok
[2025-10-12 00:01:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 00:01:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 00:01:06] Further information can be found at the LHC@home message board.
[2025-10-12 00:01:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 00:01:06] Checking for apptainer binary...
[2025-10-12 00:01:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 00:01:06] Running /usr/bin/apptainer --version
[2025-10-12 00:01:06] apptainer version 1.4.3-1.el9
[2025-10-12 00:01:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 00:01:10] c-210-19.aglt2.org
[2025-10-12 00:01:10] apptainer works
[2025-10-12 00:01:10] Set ATHENA_PROC_NUMBER=12
[2025-10-12 00:01:10] Set ATHENA_CORE_NUMBER=12
[2025-10-12 00:01:11] Starting ATLAS job with PandaID=6840843681
[2025-10-12 00:01:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 14:30:56]  *** The last 200 lines of the pilot log: ***
[2025-10-12 14:30:56] 2025-10-12 18:30:00,394 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 14:30:56] 2025-10-12 18:30:00,479 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2598.3920500000004
[2025-10-12 14:30:56] 2025-10-12 18:30:00,540 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6840843681/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 14:30:56] 2025-10-12 18:30:00,541 | INFO     | extracted standard info from prmon json
[2025-10-12 14:30:56] 2025-10-12 18:30:00,541 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 14:30:56] 2025-10-12 18:30:00,541 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 14:30:56] 2025-10-12 18:30:00,541 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 14:30:56] 2025-10-12 18:30:00,542 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 14:30:56] 2025-10-12 18:30:00,692 | INFO     | fitting pss+swap vs Time
[2025-10-12 14:30:56] 2025-10-12 18:30:00,693 | INFO     | sum of square deviations: 187748233274.97867
[2025-10-12 14:30:56] 2025-10-12 18:30:01,019 | INFO     | monitor loop #2797: job 0:6840843681 is in state 'finished'
[2025-10-12 14:30:56] 2025-10-12 18:30:01,022 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 14:30:56] 2025-10-12 18:30:01,022 | INFO     | sum of deviations: 1523100161461.789
[2025-10-12 14:30:56] 2025-10-12 18:30:01,022 | INFO     | mean x: 1760267933.5248227
[2025-10-12 14:30:56] 2025-10-12 18:30:01,022 | INFO     | mean y: 2572767.414893617
[2025-10-12 14:30:56] 2025-10-12 18:30:01,023 | INFO     | -- intersect: -14277531641.562117
[2025-10-12 14:30:56] 2025-10-12 18:30:01,023 | INFO     | intersect: -14277531641.562117
[2025-10-12 14:30:56] 2025-10-12 18:30:01,024 | INFO     | chi2: 17.581478320743575
[2025-10-12 14:30:56] 2025-10-12 18:30:01,029 | INFO     | sum of square deviations: 184439420219.85718
[2025-10-12 14:30:56] 2025-10-12 18:30:01,073 | INFO     | sum of deviations: 1689675315080.7373
[2025-10-12 14:30:56] 2025-10-12 18:30:01,073 | INFO     | mean x: 1760267781.036861
[2025-10-12 14:30:56] 2025-10-12 18:30:01,073 | INFO     | mean y: 2580425.4922711058
[2025-10-12 14:30:56] 2025-10-12 18:30:01,074 | INFO     | -- intersect: -16123478819.350824
[2025-10-12 14:30:56] 2025-10-12 18:30:01,074 | INFO     | intersect: -16123478819.350824
[2025-10-12 14:30:56] 2025-10-12 18:30:01,075 | INFO     | chi2: 15.402756977547295
[2025-10-12 14:30:56] 2025-10-12 18:30:01,075 | INFO     | current chi2=15.402756977547295 (change=12.392139633819683 %)
[2025-10-12 14:30:56] 2025-10-12 18:30:01,075 | INFO     | right removable region: 840
[2025-10-12 14:30:56] 2025-10-12 18:30:01,085 | INFO     | sum of square deviations: 184438116266.4589
[2025-10-12 14:30:56] 2025-10-12 18:30:01,144 | INFO     | sum of deviations: 1219291745398.464
[2025-10-12 14:30:56] 2025-10-12 18:30:01,145 | INFO     | mean x: 1760268086.0428061
[2025-10-12 14:30:56] 2025-10-12 18:30:01,145 | INFO     | mean y: 2586762.126040428
[2025-10-12 14:30:56] 2025-10-12 18:30:01,145 | INFO     | -- intersect: -11634272204.16053
[2025-10-12 14:30:56] 2025-10-12 18:30:01,145 | INFO     | intersect: -11634272204.16053
[2025-10-12 14:30:56] 2025-10-12 18:30:01,146 | INFO     | chi2: 13.01164998591255
[2025-10-12 14:30:56] 2025-10-12 18:30:01,155 | INFO     | current chi2=13.01164998591255 (change=25.992287175528894 %)
[2025-10-12 14:30:56] 2025-10-12 18:30:01,156 | INFO     | sum of square deviations: 181167321858.35736
[2025-10-12 14:30:56] 2025-10-12 18:30:01,190 | INFO     | time since job start (51959s) is within the limit (172800.0s)
[2025-10-12 14:30:56] 2025-10-12 18:30:01,222 | INFO     | sum of deviations: 961462172613.0269
[2025-10-12 14:30:56] 2025-10-12 18:30:01,223 | INFO     | mean x: 1760268238.55622
[2025-10-12 14:30:56] 2025-10-12 18:30:01,223 | INFO     | mean y: 2598784.552631579
[2025-10-12 14:30:56] 2025-10-12 18:30:01,223 | INFO     | -- intersect: -9339214670.895853
[2025-10-12 14:30:56] 2025-10-12 18:30:01,223 | INFO     | intersect: -9339214670.895853
[2025-10-12 14:30:56] 2025-10-12 18:30:01,224 | INFO     | chi2: 9.856273383947158
[2025-10-12 14:30:56] 2025-10-12 18:30:01,224 | INFO     | current chi2=9.856273383947158 (change=24.25039564837399 %)
[2025-10-12 14:30:56] 2025-10-12 18:30:01,224 | INFO     | left removable region: 20
[2025-10-12 14:30:56] 2025-10-12 18:30:01,225 | INFO     | sum of square deviations: 170962409684.32227
[2025-10-12 14:30:56] 2025-10-12 18:30:01,279 | INFO     | sum of deviations: 659614989069.5116
[2025-10-12 14:30:56] 2025-10-12 18:30:01,279 | INFO     | mean x: 1760268360.5902438
[2025-10-12 14:30:56] 2025-10-12 18:30:01,280 | INFO     | mean y: 2629140.68902439
[2025-10-12 14:30:56] 2025-10-12 18:30:01,280 | INFO     | -- intersect: -6788918764.924152
[2025-10-12 14:30:56] 2025-10-12 18:30:01,280 | INFO     | intersect: -6788918764.924152
[2025-10-12 14:30:56] 2025-10-12 18:30:01,289 | INFO     | chi2: 2.4981657692956594
[2025-10-12 14:30:56] 2025-10-12 18:30:01,290 | INFO     | -- intersect: -6788918764.924152
[2025-10-12 14:30:56] 2025-10-12 18:30:01,290 | INFO     | current memory leak: 3.86 B/s (using 820 data points, chi2=2.50)
[2025-10-12 14:30:56] 2025-10-12 18:30:01,291 | INFO     | could have reported an average CPU frequency of 2581 MHz (31 samples)
[2025-10-12 14:30:56] 2025-10-12 18:30:01,291 | INFO     | ..............................
[2025-10-12 14:30:56] 2025-10-12 18:30:01,292 | INFO     | . Timing measurements:
[2025-10-12 14:30:56] 2025-10-12 18:30:01,292 | INFO     | . get job = 1 s
[2025-10-12 14:30:56] 2025-10-12 18:30:01,292 | INFO     | . initial setup = 18 s
[2025-10-12 14:30:56] 2025-10-12 18:30:01,292 | INFO     | . payload setup = 87 s
[2025-10-12 14:30:56] 2025-10-12 18:30:01,292 | INFO     | . stage-in = 0 s
[2025-10-12 14:30:56] 2025-10-12 18:30:01,292 | INFO     | . payload execution = 51612 s
[2025-10-12 14:30:56] 2025-10-12 18:30:01,292 | INFO     | . stage-out = 12 s
[2025-10-12 14:30:56] 2025-10-12 18:30:01,292 | INFO     | . log creation = 4 s
[2025-10-12 14:30:56] 2025-10-12 18:30:01,301 | INFO     | ..............................
[2025-10-12 14:30:56] 2025-10-12 18:30:02,269 | INFO     | 
[2025-10-12 14:30:56] 2025-10-12 18:30:02,292 | INFO     | job summary report
[2025-10-12 14:30:56] 2025-10-12 18:30:02,292 | INFO     | --------------------------------------------------
[2025-10-12 14:30:56] 2025-10-12 18:30:02,292 | INFO     | PanDA job id: 6840843681
[2025-10-12 14:30:56] 2025-10-12 18:30:02,292 | INFO     | task id: 46376905
[2025-10-12 14:30:56] 2025-10-12 18:30:02,292 | INFO     | errors: (none)
[2025-10-12 14:30:56] 2025-10-12 18:30:02,292 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 14:30:56] 2025-10-12 18:30:02,292 | INFO     | pilot state: finished 
[2025-10-12 14:30:56] 2025-10-12 18:30:02,293 | INFO     | transexitcode: 0
[2025-10-12 14:30:56] 2025-10-12 18:30:02,293 | INFO     | exeerrorcode: 0
[2025-10-12 14:30:56] 2025-10-12 18:30:02,293 | INFO     | exeerrordiag: 
[2025-10-12 14:30:56] 2025-10-12 18:30:02,293 | INFO     | exitcode: 0
[2025-10-12 14:30:56] 2025-10-12 18:30:02,293 | INFO     | exitmsg: OK
[2025-10-12 14:30:56] 2025-10-12 18:30:02,293 | INFO     | cpuconsumptiontime: 51253 s
[2025-10-12 14:30:56] 2025-10-12 18:30:02,293 | INFO     | nevents: 400
[2025-10-12 14:30:56] 2025-10-12 18:30:02,293 | INFO     | neventsw: 0
[2025-10-12 14:30:56] 2025-10-12 18:30:02,293 | INFO     | pid: 2065835
[2025-10-12 14:30:56] 2025-10-12 18:30:02,293 | INFO     | pgrp: 2065835
[2025-10-12 14:30:56] 2025-10-12 18:30:02,294 | INFO     | corecount: 12
[2025-10-12 14:30:56] 2025-10-12 18:30:02,294 | INFO     | event service: False
[2025-10-12 14:30:56] 2025-10-12 18:30:02,294 | INFO     | sizes: {0: 2347937, 2: 2348538, 4: 2348622, 6: 2348650, 7: 2348678, 8: 2348678, 9: 2349033, 22: 2349033, 35: 2349061, 46: 2349089, 57: 2349117, 70: 2349425, 82: 23
[2025-10-12 14:30:56] 2025-10-12 18:30:02,294 | INFO     | --------------------------------------------------
[2025-10-12 14:30:56] 2025-10-12 18:30:02,294 | INFO     | 
[2025-10-12 14:30:56] 2025-10-12 18:30:02,294 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-12 14:30:56] 2025-10-12 18:30:02,561 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 14:30:56] 2025-10-12 18:30:02,561 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 14:30:56] 2025-10-12 18:30:02,562 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 14:30:56] 2025-10-12 18:30:02,562 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 14:30:56] 2025-10-12 18:30:02,562 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 14:30:56] 2025-10-12 18:30:02,562 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 14:30:56] 2025-10-12 18:30:02,562 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 14:30:56] 2025-10-12 18:30:02,562 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 14:30:56] 2025-10-12 18:30:02,562 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 14:30:56] 2025-10-12 18:30:02,562 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 14:30:56] 2025-10-12 18:30:02,563 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 14:30:56] 2025-10-12 18:30:02,563 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 14:30:56] 2025-10-12 18:30:02,563 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 14:30:56] 2025-10-12 18:30:02,563 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 14:30:56] 2025-10-12 18:30:02,563 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 14:30:56] 2025-10-12 18:30:02,563 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 14:30:56] 2025-10-12 18:30:02,563 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 14:30:56] 2025-10-12 18:30:02,563 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 14:30:56] 2025-10-12 18:30:02,563 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 14:30:56] 2025-10-12 18:30:02,563 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 14:30:56] 2025-10-12 18:30:02,564 | INFO     | job 6840843681 has completed (purged errors)
[2025-10-12 14:30:56] 2025-10-12 18:30:02,564 | INFO     | overall cleanup function is called
[2025-10-12 14:30:56] 2025-10-12 18:30:03,588 | INFO     | --- collectZombieJob: --- 10, [2065835]
[2025-10-12 14:30:56] 2025-10-12 18:30:03,588 | INFO     | zombie collector waiting for pid 2065835
[2025-10-12 14:30:56] 2025-10-12 18:30:03,588 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 14:30:56] 2025-10-12 18:30:03,588 | INFO     | collected zombie processes
[2025-10-12 14:30:56] 2025-10-12 18:30:03,588 | INFO     | will attempt to kill all subprocesses of pid=2065835
[2025-10-12 14:30:56] 2025-10-12 18:30:04,627 | INFO     | process IDs to be killed: [2065835] (in reverse order)
[2025-10-12 14:30:56] 2025-10-12 18:30:05,971 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 14:30:56] 2025-10-12 18:30:05,971 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 14:30:56] 2025-10-12 18:30:05,985 | INFO     | did not find any defunct processes belonging to 2065835
[2025-10-12 14:30:56] 2025-10-12 18:30:06,060 | INFO     | did not find any defunct processes belonging to 2065835
[2025-10-12 14:30:56] 2025-10-12 18:30:06,061 | INFO     | ready for new job
[2025-10-12 14:30:56] 2025-10-12 18:30:06,061 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 14:30:56] 2025-10-12 18:30:06,164 | INFO     | ***************************************
[2025-10-12 14:30:56] 2025-10-12 18:30:06,164 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 14:30:56] 2025-10-12 18:30:06,164 | INFO     | ***************************************
[2025-10-12 14:30:56] 2025-10-12 18:30:06,164 | INFO     | 
[2025-10-12 14:30:56] 2025-10-12 18:30:06,217 | INFO     | architecture information:
[2025-10-12 14:30:56] 2025-10-12 18:30:06,224 | INFO     | executing command: cat /etc/os-release
[2025-10-12 14:30:56] 2025-10-12 18:30:06,403 | INFO     | cat /etc/os-release:
[2025-10-12 14:30:56] NAME="CentOS Linux"
[2025-10-12 14:30:56] VERSION="7 (Core)"
[2025-10-12 14:30:56] ID="centos"
[2025-10-12 14:30:56] ID_LIKE="rhel fedora"
[2025-10-12 14:30:56] VERSION_ID="7"
[2025-10-12 14:30:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 14:30:56] ANSI_COLOR="0;31"
[2025-10-12 14:30:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 14:30:56] HOME_URL="https://www.centos.org/"
[2025-10-12 14:30:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 14:30:56] 
[2025-10-12 14:30:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 14:30:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 14:30:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 14:30:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 14:30:56] 
[2025-10-12 14:30:56] 2025-10-12 18:30:06,404 | INFO     | ***************************************
[2025-10-12 14:30:56] 2025-10-12 18:30:06,942 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-12 14:30:56] 2025-10-12 18:30:07,181 | INFO     | sufficient remaining disk space (53003419648 B)
[2025-10-12 14:30:56] 2025-10-12 18:30:07,182 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 14:30:56] 2025-10-12 18:30:07,182 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 14:30:56] 2025-10-12 18:30:07,182 | INFO     | update_server=False
[2025-10-12 14:30:56] 2025-10-12 18:30:07,182 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 14:30:56] 2025-10-12 18:30:07,186 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 14:30:56] 2025-10-12 18:30:07,186 | INFO     | aborting loop
[2025-10-12 14:30:56] 2025-10-12 18:30:07,186 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 14:30:56] 2025-10-12 18:30:07,297 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 14:30:56] 2025-10-12 18:30:07,409 | INFO     | all payload control threads have been joined
[2025-10-12 14:30:56] 2025-10-12 18:30:07,827 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 14:30:56] 2025-10-12 18:30:07,969 | INFO     | all data control threads have been joined
[2025-10-12 14:30:56] 2025-10-12 18:30:08,143 | INFO     | all job control threads have been joined
[2025-10-12 14:30:56] 2025-10-12 18:30:08,198 | INFO     | [job] retrieve thread has finished
[2025-10-12 14:30:56] 2025-10-12 18:30:08,235 | INFO     | [job] job monitor thread has finished
[2025-10-12 14:30:56] 2025-10-12 18:30:08,346 | INFO     | [job] queue monitor thread has finished
[2025-10-12 14:30:56] 2025-10-12 18:30:08,415 | INFO     | [payload] control thread has finished
[2025-10-12 14:30:56] 2025-10-12 18:30:08,559 | INFO     | [payload] validate_post thread has finished
[2025-10-12 14:30:56] 2025-10-12 18:30:08,909 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 14:30:56] 2025-10-12 18:30:08,975 | INFO     | [data] control thread has finished
[2025-10-12 14:30:56] 2025-10-12 18:30:09,149 | INFO     | [job] control thread has finished
[2025-10-12 14:30:56] 2025-10-12 18:30:09,243 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 14:30:56] 2025-10-12 18:30:09,243 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 14:30:56] 2025-10-12 18:30:09,498 | INFO     | [data] copytool_in thread has finished
[2025-10-12 14:30:56] 2025-10-12 18:30:09,499 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 14:30:56] 2025-10-12 18:30:09,510 | INFO     | [job] validate thread has finished
[2025-10-12 14:30:56] 2025-10-12 18:30:09,520 | INFO     | [payload] failed_post thread has finished
[2025-10-12 14:30:56] 2025-10-12 18:30:09,834 | INFO     | [data] copytool_out thread has finished
[2025-10-12 14:30:56] 2025-10-12 18:30:11,296 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 14:30:56] 2025-10-12 18:30:35,919 | INFO     | PID=2056501 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 14:30:56] 2025-10-12 18:30:35,919 | INFO     | .. there are 7 such processes running
[2025-10-12 14:30:56] 2025-10-12 18:30:35,973 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 14:30:56] 2025-10-12 18:30:35,973 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 14:30:56] 2025-10-12 18:30:35,973 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 14:30:56] 2025-10-12 18:30:45,483 | INFO     | [monitor] cgroup control has ended
[2025-10-12 14:30:56] 2025-10-12 18:30:46,912 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140675938281280)>', '<ExcThread(monitor, started 140675010000640)>']
[2025-10-12 14:30:56] 2025-10-12 18:30:47,140 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 14:30:56] 2025-10-12 18:30:47,140 | INFO     | [monitor] control thread has ended
[2025-10-12 14:30:56] 2025-10-12 18:30:51,950 | INFO     | all workflow threads have been joined
[2025-10-12 14:30:56] 2025-10-12 18:30:51,950 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 14:30:56] 2025-10-12 18:30:51,950 | INFO     | traces error code: 0
[2025-10-12 14:30:56] 2025-10-12 18:30:51,951 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 14:30:56] 2025-10-12 18:30:54,258 [wrapper] ==== pilot stdout END ====
[2025-10-12 14:30:56] 2025-10-12 18:30:54,320 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 14:30:56] 2025-10-12 18:30:54,394 [wrapper] pilotpid: 2056501
[2025-10-12 14:30:56] 2025-10-12 18:30:54,460 [wrapper] Pilot exit status: 0
[2025-10-12 14:30:56] 2025-10-12 18:30:54,674 [wrapper] pandaids: 6840843681
[2025-10-12 14:30:56] 2025-10-12 18:30:55,343 [wrapper] cleanup supervisor_pilot 3293050 2056502
[2025-10-12 14:30:56] 2025-10-12 18:30:55,403 [wrapper] Test setup, not cleaning
[2025-10-12 14:30:56] 2025-10-12 18:30:55,471 [wrapper] apfmon messages muted
[2025-10-12 14:30:56] 2025-10-12 18:30:55,643 [wrapper] ==== wrapper stdout END ====
[2025-10-12 14:30:56] 2025-10-12 18:30:55,814 [wrapper] ==== wrapper stderr END ====
[2025-10-12 14:30:56]  *** Error codes and diagnostics ***
[2025-10-12 14:30:56]     "exeErrorCode": 0,
[2025-10-12 14:30:56]     "exeErrorDiag": "",
[2025-10-12 14:30:56]     "pilotErrorCode": 0,
[2025-10-12 14:30:56]     "pilotErrorDiag": "",
[2025-10-12 14:30:56]  *** Listing of results directory ***
[2025-10-12 14:30:56] total 402976
[2025-10-12 14:30:56] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 15:43 pilot3.tar.gz
[2025-10-12 14:30:56] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 15:48 queuedata.json
[2025-10-12 14:30:56] -rwx------. 1 boincer umatlas     36292 Oct 11 15:50 runpilot2-wrapper.sh
[2025-10-12 14:30:56] -rw-r--r--. 1 boincer umatlas       100 Oct 12 00:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 14:30:56] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 00:00 run_atlas
[2025-10-12 14:30:56] -rw-r--r--. 1 boincer umatlas       105 Oct 12 00:00 job.xml
[2025-10-12 14:30:56] -rw-r--r--. 2 boincer umatlas 216417913 Oct 12 00:01 EVNT.46376901._001698.pool.root.1
[2025-10-12 14:30:56] -rw-r--r--. 2 boincer umatlas    569679 Oct 12 00:01 input.tar.gz
[2025-10-12 14:30:56] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:01 start_atlas.sh
[2025-10-12 14:30:56] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 00:01 shared
[2025-10-12 14:30:56] -rw-r--r--. 1 boincer umatlas         0 Oct 12 00:01 boinc_lockfile
[2025-10-12 14:30:56] -rw-r--r--. 1 boincer umatlas      2518 Oct 12 00:01 pandaJob.out
[2025-10-12 14:30:56] -rw-------. 1 boincer umatlas    975512 Oct 12 00:03 agis_schedconf.cvmfs.json
[2025-10-12 14:30:56] drwx------. 5 boincer umatlas      4096 Oct 12 00:04 pilot3
[2025-10-12 14:30:56] -rw-------. 1 boincer umatlas 178251227 Oct 12 14:25 HITS.46376905._136373.pool.root.1
[2025-10-12 14:30:56] -rw-r--r--. 1 boincer umatlas       531 Oct 12 14:26 boinc_task_state.xml
[2025-10-12 14:30:56] -rw-r--r--. 1 boincer umatlas      6710 Oct 12 14:27 init_data.xml
[2025-10-12 14:30:56] -rw-------. 1 boincer umatlas      1052 Oct 12 14:28 memory_monitor_summary.json
[2025-10-12 14:30:56] -rw-------. 1 boincer umatlas   1560580 Oct 12 14:28 agis_ddmendpoints.agis.ALL.json
[2025-10-12 14:30:56] -rw-------. 1 boincer umatlas    992552 Oct 12 14:28 log.46376905._136373.job.log.tgz.1
[2025-10-12 14:30:56] -rw-------. 1 boincer umatlas      7844 Oct 12 14:30 heartbeat.json
[2025-10-12 14:30:56] -rw-------. 1 boincer umatlas        95 Oct 12 14:30 pilot_heartbeat.json
[2025-10-12 14:30:56] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 14:30 boinc_mmap_file
[2025-10-12 14:30:56] -rw-r--r--. 1 boincer umatlas        28 Oct 12 14:30 wrapper_checkpoint.txt
[2025-10-12 14:30:56] -rw-------. 1 boincer umatlas      4823 Oct 12 14:30 pilotlog.txt
[2025-10-12 14:30:56] -rw-------. 1 boincer umatlas   6045515 Oct 12 14:30 log.46376905._136373.job.log.1
[2025-10-12 14:30:56] -rw-------. 1 boincer umatlas       357 Oct 12 14:30 output.list
[2025-10-12 14:30:56] -rw-r--r--. 1 boincer umatlas       620 Oct 12 14:30 runtime_log
[2025-10-12 14:30:56] -rw-------. 1 boincer umatlas   7055360 Oct 12 14:30 result.tar.gz
[2025-10-12 14:30:56] -rw-r--r--. 1 boincer umatlas      8706 Oct 12 14:30 runtime_log.err
[2025-10-12 14:30:56] -rw-------. 1 boincer umatlas       662 Oct 12 14:30 LWDODmVmuR8n9Rq4apOajLDm4fhM0noT9bVof3QYDm0TSMDmEZY57n.diag
[2025-10-12 14:30:56] -rw-r--r--. 1 boincer umatlas     21258 Oct 12 14:30 stderr.txt
[2025-10-12 14:30:57] HITS file was successfully produced:
[2025-10-12 14:30:57] -rw-------. 1 boincer umatlas 178251227 Oct 12 14:25 shared/HITS.pool.root.1
[2025-10-12 14:30:57]  *** Contents of shared directory: ***
[2025-10-12 14:30:57] total 392896
[2025-10-12 14:30:57] -rw-r--r--. 2 boincer umatlas 216417913 Oct 12 00:01 ATLAS.root_0
[2025-10-12 14:30:57] -rw-r--r--. 2 boincer umatlas    569679 Oct 12 00:01 input.tar.gz
[2025-10-12 14:30:57] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:01 start_atlas.sh
[2025-10-12 14:30:57] -rw-------. 1 boincer umatlas 178251227 Oct 12 14:25 HITS.pool.root.1
[2025-10-12 14:30:57] -rw-------. 1 boincer umatlas   7055360 Oct 12 14:30 result.tar.gz
14:30:58 (2050033): run_atlas exited; CPU time 52509.128693
14:30:58 (2050033): called boinc_finish(0)

</stderr_txt>
]]>

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