Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:18 (373589): wrapper (7.7.26015): starting
00:01:18 (373589): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 00:01:18] Arguments: --nthreads 8
[2025-10-12 00:01:18] Threads: 8
[2025-10-12 00:01:18] Checking for CVMFS
[2025-10-12 00:01:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 00:01:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 00:01:19] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 00:01:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 00:01:20] 2.13.2.0 3695926 128754 275420 151606 2 846 28248332 32935937 27427 16776704 0 213144497 99.566 249873211 29099 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 00:01:20] CVMFS is ok
[2025-10-12 00:01:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 00:01:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 00:01:20] Further information can be found at the LHC@home message board.
[2025-10-12 00:01:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 00:01:20] Checking for apptainer binary...
[2025-10-12 00:01:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 00:01:20] Running /usr/bin/apptainer --version
[2025-10-12 00:01:20] apptainer version 1.4.3-1.el9
[2025-10-12 00:01:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 00:01:20] c6-4-5-3.aglt2.org
[2025-10-12 00:01:20] apptainer works
[2025-10-12 00:01:21] Set ATHENA_PROC_NUMBER=8
[2025-10-12 00:01:21] Set ATHENA_CORE_NUMBER=8
[2025-10-12 00:01:21] Starting ATLAS job with PandaID=6838990411
[2025-10-12 00:01:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 11:02:36]  *** The last 200 lines of the pilot log: ***
[2025-10-12 11:02:36] 2025-10-12 15:01:48,977 | INFO     | -- intersect: -7379624173.429488
[2025-10-12 11:02:36] 2025-10-12 15:01:48,977 | INFO     | intersect: -7379624173.429488
[2025-10-12 11:02:36] 2025-10-12 15:01:48,978 | INFO     | chi2: 1.0123379450268812
[2025-10-12 11:02:36] 2025-10-12 15:01:48,978 | INFO     | current chi2=1.0123379450268812 (change=35.41764120307952 %)
[2025-10-12 11:02:36] 2025-10-12 15:01:48,979 | INFO     | sum of square deviations: 73898146822.50981
[2025-10-12 11:02:36] 2025-10-12 15:01:48,985 | INFO     | sum of deviations: 247929655768.4416
[2025-10-12 11:02:36] 2025-10-12 15:01:48,985 | INFO     | mean x: 1760262376.3580644
[2025-10-12 11:02:36] 2025-10-12 15:01:48,985 | INFO     | mean y: 2205594.101612903
[2025-10-12 11:02:36] 2025-10-12 15:01:48,985 | INFO     | -- intersect: -5903507387.859897
[2025-10-12 11:02:36] 2025-10-12 15:01:48,985 | INFO     | intersect: -5903507387.859897
[2025-10-12 11:02:36] 2025-10-12 15:01:48,986 | INFO     | chi2: 0.5188839706121341
[2025-10-12 11:02:36] 2025-10-12 15:01:48,986 | INFO     | current chi2=0.5188839706121341 (change=48.743996689923954 %)
[2025-10-12 11:02:36] 2025-10-12 15:01:48,987 | INFO     | sum of square deviations: 72124425723.79828
[2025-10-12 11:02:36] 2025-10-12 15:01:48,992 | INFO     | sum of deviations: 207003842055.99045
[2025-10-12 11:02:36] 2025-10-12 15:01:48,993 | INFO     | mean x: 1760262528.8650405
[2025-10-12 11:02:36] 2025-10-12 15:01:48,993 | INFO     | mean y: 2209110.5902439025
[2025-10-12 11:02:36] 2025-10-12 15:01:48,993 | INFO     | -- intersect: -5049908848.693908
[2025-10-12 11:02:36] 2025-10-12 15:01:48,993 | INFO     | intersect: -5049908848.693908
[2025-10-12 11:02:36] 2025-10-12 15:01:48,994 | INFO     | chi2: 0.34868396369819205
[2025-10-12 11:02:36] 2025-10-12 15:01:48,994 | INFO     | current chi2=0.34868396369819205 (change=32.80116876864685 %)
[2025-10-12 11:02:36] 2025-10-12 15:01:48,995 | INFO     | sum of square deviations: 70379497507.207
[2025-10-12 11:02:36] 2025-10-12 15:01:49,000 | INFO     | sum of deviations: 172731063002.0263
[2025-10-12 11:02:36] 2025-10-12 15:01:49,001 | INFO     | mean x: 1760262681.3639345
[2025-10-12 11:02:36] 2025-10-12 15:01:49,001 | INFO     | mean y: 2212105.855737705
[2025-10-12 11:02:36] 2025-10-12 15:01:49,001 | INFO     | -- intersect: -4317967135.032619
[2025-10-12 11:02:36] 2025-10-12 15:01:49,001 | INFO     | intersect: -4317967135.032619
[2025-10-12 11:02:36] 2025-10-12 15:01:49,002 | INFO     | chi2: 0.2395002865398107
[2025-10-12 11:02:36] 2025-10-12 15:01:49,002 | INFO     | current chi2=0.2395002865398107 (change=31.313076747311126 %)
[2025-10-12 11:02:36] 2025-10-12 15:01:49,002 | INFO     | sum of square deviations: 68662830289.421555
[2025-10-12 11:02:36] 2025-10-12 15:01:49,008 | INFO     | sum of deviations: 141315329553.43793
[2025-10-12 11:02:36] 2025-10-12 15:01:49,008 | INFO     | mean x: 1760262833.8677685
[2025-10-12 11:02:36] 2025-10-12 15:01:49,008 | INFO     | mean y: 2214896.6429752065
[2025-10-12 11:02:36] 2025-10-12 15:01:49,008 | INFO     | -- intersect: -3620591233.2554584
[2025-10-12 11:02:36] 2025-10-12 15:01:49,008 | INFO     | intersect: -3620591233.2554584
[2025-10-12 11:02:36] 2025-10-12 15:01:49,009 | INFO     | chi2: 0.1451412719705218
[2025-10-12 11:02:36] 2025-10-12 15:01:49,009 | INFO     | current chi2=0.1451412719705218 (change=39.398288800629125 %)
[2025-10-12 11:02:36] 2025-10-12 15:01:49,009 | INFO     | sum of square deviations: 66974450989.065125
[2025-10-12 11:02:36] 2025-10-12 15:01:49,015 | INFO     | sum of deviations: 126474295568.78485
[2025-10-12 11:02:36] 2025-10-12 15:01:49,015 | INFO     | mean x: 1760262986.365
[2025-10-12 11:02:36] 2025-10-12 15:01:49,015 | INFO     | mean y: 2216234.151666667
[2025-10-12 11:02:36] 2025-10-12 15:01:49,015 | INFO     | -- intersect: -3321857616.825734
[2025-10-12 11:02:36] 2025-10-12 15:01:49,015 | INFO     | intersect: -3321857616.825734
[2025-10-12 11:02:36] 2025-10-12 15:01:49,016 | INFO     | chi2: 0.12113527699944128
[2025-10-12 11:02:36] 2025-10-12 15:01:49,016 | INFO     | current chi2=0.12113527699944128 (change=16.539744102529383 %)
[2025-10-12 11:02:36] 2025-10-12 15:01:49,016 | INFO     | left removable region: 90
[2025-10-12 11:02:36] 2025-10-12 15:01:49,017 | INFO     | sum of square deviations: 51306142387.47942
[2025-10-12 11:02:36] 2025-10-12 15:01:49,022 | INFO     | sum of deviations: 96145473103.623
[2025-10-12 11:02:36] 2025-10-12 15:01:49,022 | INFO     | mean x: 1760264175.8615665
[2025-10-12 11:02:36] 2025-10-12 15:01:49,022 | INFO     | mean y: 2219592.5081967213
[2025-10-12 11:02:36] 2025-10-12 15:01:49,022 | INFO     | -- intersect: -3296438698.6844473
[2025-10-12 11:02:36] 2025-10-12 15:01:49,022 | INFO     | intersect: -3296438698.6844473
[2025-10-12 11:02:36] 2025-10-12 15:01:49,023 | INFO     | chi2: 0.09861438415530006
[2025-10-12 11:02:36] 2025-10-12 15:01:49,023 | INFO     | -- intersect: -3296438698.6844473
[2025-10-12 11:02:36] 2025-10-12 15:01:49,023 | INFO     | current memory leak: 1.87 B/s (using 549 data points, chi2=0.10)
[2025-10-12 11:02:36] 2025-10-12 15:01:49,024 | INFO     | could have reported an average CPU frequency of 2920 MHz (25 samples)
[2025-10-12 11:02:36] 2025-10-12 15:01:49,024 | INFO     | ..............................
[2025-10-12 11:02:36] 2025-10-12 15:01:49,024 | INFO     | . Timing measurements:
[2025-10-12 11:02:36] 2025-10-12 15:01:49,024 | INFO     | . get job = 1 s
[2025-10-12 11:02:36] 2025-10-12 15:01:49,024 | INFO     | . initial setup = 8 s
[2025-10-12 11:02:36] 2025-10-12 15:01:49,024 | INFO     | . payload setup = 61 s
[2025-10-12 11:02:36] 2025-10-12 15:01:49,025 | INFO     | . stage-in = 0 s
[2025-10-12 11:02:36] 2025-10-12 15:01:49,025 | INFO     | . payload execution = 39367 s
[2025-10-12 11:02:36] 2025-10-12 15:01:49,025 | INFO     | . stage-out = 2 s
[2025-10-12 11:02:36] 2025-10-12 15:01:49,025 | INFO     | . log creation = 0 s
[2025-10-12 11:02:36] 2025-10-12 15:01:49,025 | INFO     | ..............................
[2025-10-12 11:02:36] 2025-10-12 15:01:49,102 | INFO     | 
[2025-10-12 11:02:36] 2025-10-12 15:01:49,103 | INFO     | job summary report
[2025-10-12 11:02:36] 2025-10-12 15:01:49,103 | INFO     | --------------------------------------------------
[2025-10-12 11:02:36] 2025-10-12 15:01:49,103 | INFO     | PanDA job id: 6838990411
[2025-10-12 11:02:36] 2025-10-12 15:01:49,103 | INFO     | task id: 46676269
[2025-10-12 11:02:36] 2025-10-12 15:01:49,103 | INFO     | errors: (none)
[2025-10-12 11:02:36] 2025-10-12 15:01:49,103 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 11:02:36] 2025-10-12 15:01:49,103 | INFO     | pilot state: finished 
[2025-10-12 11:02:36] 2025-10-12 15:01:49,103 | INFO     | transexitcode: 0
[2025-10-12 11:02:36] 2025-10-12 15:01:49,103 | INFO     | exeerrorcode: 0
[2025-10-12 11:02:36] 2025-10-12 15:01:49,103 | INFO     | exeerrordiag: 
[2025-10-12 11:02:36] 2025-10-12 15:01:49,104 | INFO     | exitcode: 0
[2025-10-12 11:02:36] 2025-10-12 15:01:49,104 | INFO     | exitmsg: OK
[2025-10-12 11:02:36] 2025-10-12 15:01:49,104 | INFO     | cpuconsumptiontime: 43553 s
[2025-10-12 11:02:36] 2025-10-12 15:01:49,104 | INFO     | nevents: 400
[2025-10-12 11:02:36] 2025-10-12 15:01:49,104 | INFO     | neventsw: 0
[2025-10-12 11:02:36] 2025-10-12 15:01:49,104 | INFO     | pid: 454409
[2025-10-12 11:02:36] 2025-10-12 15:01:49,104 | INFO     | pgrp: 454409
[2025-10-12 11:02:36] 2025-10-12 15:01:49,104 | INFO     | corecount: 8
[2025-10-12 11:02:36] 2025-10-12 15:01:49,104 | INFO     | event service: False
[2025-10-12 11:02:36] 2025-10-12 15:01:49,104 | INFO     | sizes: {0: 2348629, 1: 2348685, 2: 2348912, 3: 2348940, 14: 2348940, 25: 2348968, 36: 2349124, 43: 2349414, 49: 2349442, 39432: 2391115, 39436: 2400113, 39438: 240
[2025-10-12 11:02:36] 2025-10-12 15:01:49,104 | INFO     | --------------------------------------------------
[2025-10-12 11:02:36] 2025-10-12 15:01:49,105 | INFO     | 
[2025-10-12 11:02:36] 2025-10-12 15:01:49,105 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-10-12 11:02:36] 2025-10-12 15:01:49,121 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 11:02:36] 2025-10-12 15:01:49,121 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 11:02:36] 2025-10-12 15:01:49,121 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 11:02:36] 2025-10-12 15:01:49,121 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 11:02:36] 2025-10-12 15:01:49,121 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 11:02:36] 2025-10-12 15:01:49,121 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 11:02:36] 2025-10-12 15:01:49,122 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 11:02:36] 2025-10-12 15:01:49,122 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 11:02:36] 2025-10-12 15:01:49,122 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 11:02:36] 2025-10-12 15:01:49,122 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 11:02:36] 2025-10-12 15:01:49,122 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 11:02:36] 2025-10-12 15:01:49,122 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 11:02:36] 2025-10-12 15:01:49,122 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 11:02:36] 2025-10-12 15:01:49,122 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 11:02:36] 2025-10-12 15:01:49,122 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 11:02:36] 2025-10-12 15:01:49,122 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 11:02:36] 2025-10-12 15:01:49,122 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 11:02:36] 2025-10-12 15:01:49,122 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 11:02:36] 2025-10-12 15:01:49,122 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 11:02:36] 2025-10-12 15:01:49,122 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 11:02:36] 2025-10-12 15:01:49,122 | INFO     | job 6838990411 has completed (purged errors)
[2025-10-12 11:02:36] 2025-10-12 15:01:49,122 | INFO     | overall cleanup function is called
[2025-10-12 11:02:36] 2025-10-12 15:01:50,129 | INFO     | --- collectZombieJob: --- 10, [454409]
[2025-10-12 11:02:36] 2025-10-12 15:01:50,129 | INFO     | zombie collector waiting for pid 454409
[2025-10-12 11:02:36] 2025-10-12 15:01:50,129 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 11:02:36] 2025-10-12 15:01:50,129 | INFO     | collected zombie processes
[2025-10-12 11:02:36] 2025-10-12 15:01:50,129 | INFO     | will attempt to kill all subprocesses of pid=454409
[2025-10-12 11:02:36] 2025-10-12 15:01:50,332 | INFO     | process IDs to be killed: [454409] (in reverse order)
[2025-10-12 11:02:36] 2025-10-12 15:01:50,413 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 11:02:36] 2025-10-12 15:01:50,414 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 11:02:36] 2025-10-12 15:01:50,426 | INFO     | did not find any defunct processes belonging to 454409
[2025-10-12 11:02:36] 2025-10-12 15:01:50,438 | INFO     | did not find any defunct processes belonging to 454409
[2025-10-12 11:02:36] 2025-10-12 15:01:50,439 | INFO     | ready for new job
[2025-10-12 11:02:36] 2025-10-12 15:01:50,439 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 11:02:36] 2025-10-12 15:01:50,442 | INFO     | ***************************************
[2025-10-12 11:02:36] 2025-10-12 15:01:50,442 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 11:02:36] 2025-10-12 15:01:50,442 | INFO     | ***************************************
[2025-10-12 11:02:36] 2025-10-12 15:01:50,442 | INFO     | 
[2025-10-12 11:02:36] 2025-10-12 15:01:50,457 | INFO     | architecture information:
[2025-10-12 11:02:36] 2025-10-12 15:01:50,458 | INFO     | executing command: cat /etc/os-release
[2025-10-12 11:02:36] 2025-10-12 15:01:50,471 | INFO     | cat /etc/os-release:
[2025-10-12 11:02:36] NAME="CentOS Linux"
[2025-10-12 11:02:36] VERSION="7 (Core)"
[2025-10-12 11:02:36] ID="centos"
[2025-10-12 11:02:36] ID_LIKE="rhel fedora"
[2025-10-12 11:02:36] VERSION_ID="7"
[2025-10-12 11:02:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 11:02:36] ANSI_COLOR="0;31"
[2025-10-12 11:02:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 11:02:36] HOME_URL="https://www.centos.org/"
[2025-10-12 11:02:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 11:02:36] 
[2025-10-12 11:02:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 11:02:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 11:02:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 11:02:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 11:02:36] 
[2025-10-12 11:02:36] 2025-10-12 15:01:50,472 | INFO     | ***************************************
[2025-10-12 11:02:36] 2025-10-12 15:01:50,974 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-10-12 11:02:36] 2025-10-12 15:01:50,990 | INFO     | sufficient remaining disk space (74981572608 B)
[2025-10-12 11:02:36] 2025-10-12 15:01:50,990 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 11:02:36] 2025-10-12 15:01:50,990 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 11:02:36] 2025-10-12 15:01:50,991 | INFO     | update_server=False
[2025-10-12 11:02:36] 2025-10-12 15:01:50,991 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 11:02:36] 2025-10-12 15:01:50,991 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 11:02:36] 2025-10-12 15:01:50,991 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 11:02:36] 2025-10-12 15:01:50,991 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 11:02:36] 2025-10-12 15:01:51,212 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 11:02:36] 2025-10-12 15:01:51,212 | INFO     | aborting loop
[2025-10-12 11:02:36] 2025-10-12 15:01:51,720 | INFO     | all payload control threads have been joined
[2025-10-12 11:02:36] 2025-10-12 15:01:51,911 | INFO     | all data control threads have been joined
[2025-10-12 11:02:36] 2025-10-12 15:01:51,996 | INFO     | [job] retrieve thread has finished
[2025-10-12 11:02:36] 2025-10-12 15:01:51,997 | INFO     | [job] queue monitor thread has finished
[2025-10-12 11:02:36] 2025-10-12 15:01:52,123 | INFO     | [data] copytool_in thread has finished
[2025-10-12 11:02:36] 2025-10-12 15:01:52,217 | INFO     | [job] job monitor thread has finished
[2025-10-12 11:02:36] 2025-10-12 15:01:52,547 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 11:02:36] 2025-10-12 15:01:52,553 | INFO     | [payload] validate_post thread has finished
[2025-10-12 11:02:36] 2025-10-12 15:01:52,570 | INFO     | all job control threads have been joined
[2025-10-12 11:02:36] 2025-10-12 15:01:52,693 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 11:02:36] 2025-10-12 15:01:52,725 | INFO     | [payload] control thread has finished
[2025-10-12 11:02:36] 2025-10-12 15:01:52,916 | INFO     | [data] control thread has finished
[2025-10-12 11:02:36] 2025-10-12 15:01:52,997 | INFO     | [data] copytool_out thread has finished
[2025-10-12 11:02:36] 2025-10-12 15:01:53,210 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 11:02:36] 2025-10-12 15:01:53,378 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 11:02:36] 2025-10-12 15:01:53,433 | INFO     | [job] validate thread has finished
[2025-10-12 11:02:36] 2025-10-12 15:01:53,546 | INFO     | [payload] failed_post thread has finished
[2025-10-12 11:02:36] 2025-10-12 15:01:53,575 | INFO     | [job] control thread has finished
[2025-10-12 11:02:36] 2025-10-12 15:01:54,999 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 11:02:36] 2025-10-12 15:02:10,193 | INFO     | [monitor] cgroup control has ended
[2025-10-12 11:02:36] 2025-10-12 15:02:10,555 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140695047337792)>', '<ExcThread(monitor, started 140694303782656)>']
[2025-10-12 11:02:36] 2025-10-12 15:02:15,580 | INFO     | all workflow threads have been joined
[2025-10-12 11:02:36] 2025-10-12 15:02:15,582 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 11:02:36] 2025-10-12 15:02:15,583 | INFO     | traces error code: 0
[2025-10-12 11:02:36] 2025-10-12 15:02:15,583 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 11:02:36] 2025-10-12 15:02:21,954 | INFO     | PID=401034 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 11:02:36] 2025-10-12 15:02:21,954 | INFO     | .. there are 39 such processes running
[2025-10-12 11:02:36] 2025-10-12 15:02:21,954 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 11:02:36] 2025-10-12 15:02:21,955 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 11:02:36] 2025-10-12 15:02:21,955 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 11:02:36] 2025-10-12 15:02:21,955 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 11:02:36] 2025-10-12 15:02:21,955 | INFO     | [monitor] control thread has ended
[2025-10-12 11:02:36] 2025-10-12 15:02:22,198 [wrapper] ==== pilot stdout END ====
[2025-10-12 11:02:36] 2025-10-12 15:02:22,201 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 11:02:36] 2025-10-12 15:02:22,203 [wrapper] pilotpid: 401034
[2025-10-12 11:02:36] 2025-10-12 15:02:22,206 [wrapper] Pilot exit status: 0
[2025-10-12 11:02:36] 2025-10-12 15:02:22,230 [wrapper] pandaids: 6838990411
[2025-10-12 11:02:36] 2025-10-12 15:02:22,322 [wrapper] cleanup supervisor_pilot 2676984 401035
[2025-10-12 11:02:36] 2025-10-12 15:02:22,331 [wrapper] Test setup, not cleaning
[2025-10-12 11:02:36] 2025-10-12 15:02:22,337 [wrapper] apfmon messages muted
[2025-10-12 11:02:36] 2025-10-12 15:02:22,340 [wrapper] ==== wrapper stdout END ====
[2025-10-12 11:02:36] 2025-10-12 15:02:22,343 [wrapper] ==== wrapper stderr END ====
[2025-10-12 11:02:36]  *** Error codes and diagnostics ***
[2025-10-12 11:02:36]     "exeErrorCode": 0,
[2025-10-12 11:02:36]     "exeErrorDiag": "",
[2025-10-12 11:02:36]     "pilotErrorCode": 0,
[2025-10-12 11:02:36]     "pilotErrorDiag": "",
[2025-10-12 11:02:36]  *** Listing of results directory ***
[2025-10-12 11:02:36] total 419780
[2025-10-12 11:02:36] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 18:04 pilot3.tar.gz
[2025-10-12 11:02:36] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 18:18 queuedata.json
[2025-10-12 11:02:36] -rwx------. 1 boincer umatlas     36292 Oct 11 18:19 runpilot2-wrapper.sh
[2025-10-12 11:02:36] -rw-r--r--. 1 boincer umatlas       100 Oct 12 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 11:02:36] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 00:01 run_atlas
[2025-10-12 11:02:36] -rw-r--r--. 1 boincer umatlas       105 Oct 12 00:01 job.xml
[2025-10-12 11:02:36] -rw-r--r--. 2 boincer umatlas 219331980 Oct 12 00:01 EVNT.46676267._002656.pool.root.1
[2025-10-12 11:02:36] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:01 start_atlas.sh
[2025-10-12 11:02:36] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 00:01 shared
[2025-10-12 11:02:36] -rw-r--r--. 2 boincer umatlas    569682 Oct 12 00:01 input.tar.gz
[2025-10-12 11:02:36] -rw-r--r--. 1 boincer umatlas         0 Oct 12 00:01 boinc_lockfile
[2025-10-12 11:02:36] -rw-r--r--. 1 boincer umatlas      2549 Oct 12 00:01 pandaJob.out
[2025-10-12 11:02:36] -rw-------. 1 boincer umatlas    975512 Oct 12 00:02 agis_schedconf.cvmfs.json
[2025-10-12 11:02:36] drwx------. 5 boincer umatlas      4096 Oct 12 00:02 pilot3
[2025-10-12 11:02:36] -rw-r--r--. 1 boincer umatlas      6855 Oct 12 10:54 init_data.xml
[2025-10-12 11:02:36] -rw-------. 1 boincer umatlas 195869693 Oct 12 11:01 HITS.46676269._066064.pool.root.1
[2025-10-12 11:02:36] -rw-r--r--. 1 boincer umatlas       531 Oct 12 11:01 boinc_task_state.xml
[2025-10-12 11:02:36] -rw-------. 1 boincer umatlas        95 Oct 12 11:01 pilot_heartbeat.json
[2025-10-12 11:02:36] -rw-------. 1 boincer umatlas      1042 Oct 12 11:01 memory_monitor_summary.json
[2025-10-12 11:02:36] -rw-------. 1 boincer umatlas   1560580 Oct 12 11:01 agis_ddmendpoints.agis.ALL.json
[2025-10-12 11:02:36] -rw-------. 1 boincer umatlas    761283 Oct 12 11:01 log.46676269._066064.job.log.tgz.1
[2025-10-12 11:02:36] -rw-------. 1 boincer umatlas      7826 Oct 12 11:01 heartbeat.json
[2025-10-12 11:02:36] -rw-------. 1 boincer umatlas       822 Oct 12 11:02 pilotlog.txt
[2025-10-12 11:02:36] -rw-------. 1 boincer umatlas   4614074 Oct 12 11:02 log.46676269._066064.job.log.1
[2025-10-12 11:02:36] -rw-------. 1 boincer umatlas       357 Oct 12 11:02 output.list
[2025-10-12 11:02:36] -rw-r--r--. 1 boincer umatlas       620 Oct 12 11:02 runtime_log
[2025-10-12 11:02:36] -rw-------. 1 boincer umatlas   5396480 Oct 12 11:02 result.tar.gz
[2025-10-12 11:02:36] -rw-r--r--. 1 boincer umatlas      8704 Oct 12 11:02 runtime_log.err
[2025-10-12 11:02:36] -rw-------. 1 boincer umatlas       657 Oct 12 11:02 IN2LDmx6wR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmbhSMDmGumPin.diag
[2025-10-12 11:02:36] -rw-r--r--. 1 boincer umatlas        28 Oct 12 11:02 wrapper_checkpoint.txt
[2025-10-12 11:02:36] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 11:02 boinc_mmap_file
[2025-10-12 11:02:36] -rw-r--r--. 1 boincer umatlas     21058 Oct 12 11:02 stderr.txt
[2025-10-12 11:02:36] HITS file was successfully produced:
[2025-10-12 11:02:36] -rw-------. 1 boincer umatlas 195869693 Oct 12 11:01 shared/HITS.pool.root.1
[2025-10-12 11:02:36]  *** Contents of shared directory: ***
[2025-10-12 11:02:36] total 411328
[2025-10-12 11:02:36] -rw-r--r--. 2 boincer umatlas 219331980 Oct 12 00:01 ATLAS.root_0
[2025-10-12 11:02:36] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:01 start_atlas.sh
[2025-10-12 11:02:36] -rw-r--r--. 2 boincer umatlas    569682 Oct 12 00:01 input.tar.gz
[2025-10-12 11:02:36] -rw-------. 1 boincer umatlas 195869693 Oct 12 11:01 HITS.pool.root.1
[2025-10-12 11:02:36] -rw-------. 1 boincer umatlas   5396480 Oct 12 11:02 result.tar.gz
11:02:38 (373589): run_atlas exited; CPU time 45068.609071
11:02:38 (373589): called boinc_finish(0)

</stderr_txt>
]]>

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