Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
13:21:04 (2941): wrapper (7.7.26015): starting
13:21:04 (2941): wrapper: running run_atlas (--nthreads 4)
[2025-10-12 13:21:04] Arguments: --nthreads 4
[2025-10-12 13:21:04] Threads: 4
[2025-10-12 13:21:04] Checking for CVMFS
[2025-10-12 13:21:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 13:21:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 13:21:07] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 13:21:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 13:21:08] 2.9.2.0 3136 0 29168 151619 3 1 31921828 36864000 0 130560 0 0 0.000 1291 8275 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-12 13:21:08] CVMFS is ok
[2025-10-12 13:21:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 13:21:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 13:21:08] Further information can be found at the LHC@home message board.
[2025-10-12 13:21:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 13:21:08] Checking for apptainer binary...
[2025-10-12 13:21:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 13:21:08] Running /usr/bin/apptainer --version
[2025-10-12 13:21:08] apptainer version 1.4.1-1.1
[2025-10-12 13:21:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 13:21:08] thA305a
[2025-10-12 13:21:08] apptainer works
[2025-10-12 13:21:08] Set ATHENA_PROC_NUMBER=4
[2025-10-12 13:21:08] Set ATHENA_CORE_NUMBER=4
[2025-10-12 13:21:08] Starting ATLAS job with PandaID=6838990463
[2025-10-12 13:21:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 14:35:30]  *** The last 200 lines of the pilot log: ***
[2025-10-12 14:35:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 14:35:30] 
[2025-10-12 14:35:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 14:35:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 14:35:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 14:35:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 14:35:30] 
[2025-10-12 14:35:30] 2025-10-12 12:34:36,911 | INFO     | ***************************************
[2025-10-12 14:35:30] 2025-10-12 12:34:37,414 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-12 14:35:30] 2025-10-12 12:34:37,431 | INFO     | sufficient remaining disk space (327830994944 B)
[2025-10-12 14:35:30] 2025-10-12 12:34:37,431 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 14:35:30] 2025-10-12 12:34:37,432 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 14:35:30] 2025-10-12 12:34:37,432 | INFO     | update_server=False
[2025-10-12 14:35:30] 2025-10-12 12:34:37,432 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 14:35:30] 2025-10-12 12:34:37,432 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 14:35:30] 2025-10-12 12:34:37,432 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 14:35:30] 2025-10-12 12:34:37,755 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 14:35:30] 2025-10-12 12:34:37,756 | INFO     | aborting loop
[2025-10-12 14:35:30] 2025-10-12 12:34:38,091 | INFO     | all payload control threads have been joined
[2025-10-12 14:35:30] 2025-10-12 12:34:38,186 | INFO     | all data control threads have been joined
[2025-10-12 14:35:30] 2025-10-12 12:34:38,437 | INFO     | [job] retrieve thread has finished
[2025-10-12 14:35:30] 2025-10-12 12:34:38,437 | INFO     | [job] queue monitor thread has finished
[2025-10-12 14:35:30] 2025-10-12 12:34:38,559 | INFO     | all job control threads have been joined
[2025-10-12 14:35:30] 2025-10-12 12:34:38,598 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 14:35:30] 2025-10-12 12:34:38,616 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 14:35:30] 2025-10-12 12:34:38,669 | INFO     | [payload] failed_post thread has finished
[2025-10-12 14:35:30] 2025-10-12 12:34:38,761 | INFO     | [job] job monitor thread has finished
[2025-10-12 14:35:30] 2025-10-12 12:34:38,985 | INFO     | [data] copytool_in thread has finished
[2025-10-12 14:35:30] 2025-10-12 12:34:39,097 | INFO     | [payload] control thread has finished
[2025-10-12 14:35:30] 2025-10-12 12:34:39,192 | INFO     | [data] control thread has finished
[2025-10-12 14:35:30] 2025-10-12 12:34:39,203 | INFO     | [payload] validate_post thread has finished
[2025-10-12 14:35:30] 2025-10-12 12:34:39,483 | INFO     | [job] validate thread has finished
[2025-10-12 14:35:30] 2025-10-12 12:34:39,565 | INFO     | [job] control thread has finished
[2025-10-12 14:35:30] 2025-10-12 12:34:39,591 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 14:35:30] 2025-10-12 12:34:39,683 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 14:35:30] 2025-10-12 12:34:40,604 | INFO     | [data] copytool_out thread has finished
[2025-10-12 14:35:30] 2025-10-12 12:34:41,439 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 14:35:30] 2025-10-12 12:34:48,433 | INFO     | job.realtimelogging is not enabled
[2025-10-12 14:35:30] 2025-10-12 12:34:49,439 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 14:35:30] 2025-10-12 12:35:07,543 | INFO     | PID=7269 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-12 14:35:30] 2025-10-12 12:35:07,544 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 14:35:30] 2025-10-12 12:35:07,544 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 14:35:30] 2025-10-12 12:35:07,544 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 14:35:30] 2025-10-12 12:35:23,325 | INFO     | [monitor] cgroup control has ended
[2025-10-12 14:35:30] 2025-10-12 12:35:25,071 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140697622841152)>', '<ExcThread(monitor, started 140696476444416)>']
[2025-10-12 14:35:30] 2025-10-12 12:35:25,639 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 14:35:30] 2025-10-12 12:35:25,639 | INFO     | [monitor] control thread has ended
[2025-10-12 14:35:30] 2025-10-12 12:35:30,097 | INFO     | all workflow threads have been joined
[2025-10-12 14:35:30] 2025-10-12 12:35:30,097 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 14:35:30] 2025-10-12 12:35:30,098 | INFO     | traces error code: 0
[2025-10-12 14:35:30] 2025-10-12 12:35:30,098 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 14:35:30] 2025-10-12 12:35:30,176 [wrapper] ==== pilot stdout END ====
[2025-10-12 14:35:30] 2025-10-12 12:35:30,180 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 14:35:30] 2025-10-12 12:35:30,185 [wrapper] pilotpid: 7269
[2025-10-12 14:35:30] 2025-10-12 12:35:30,189 [wrapper] Pilot exit status: 0
[2025-10-12 14:35:30] 2025-10-12 12:35:30,201 [wrapper] pandaids: 6838990463
[2025-10-12 14:35:30] 2025-10-12 12:35:30,225 [wrapper] cleanup supervisor_pilot   23662 7270
[2025-10-12 14:35:30] 2025-10-12 12:35:30,229 [wrapper] Test setup, not cleaning
[2025-10-12 14:35:30] 2025-10-12 12:35:30,233 [wrapper] apfmon messages muted
[2025-10-12 14:35:30] 2025-10-12 12:35:30,236 [wrapper] ==== wrapper stdout END ====
[2025-10-12 14:35:30] 2025-10-12 12:35:30,240 [wrapper] ==== wrapper stderr END ====
[2025-10-12 14:35:30]  *** Error codes and diagnostics ***
[2025-10-12 14:35:30]     "exeErrorCode": 0,
[2025-10-12 14:35:30]     "exeErrorDiag": "",
[2025-10-12 14:35:30]     "pilotErrorCode": 0,
[2025-10-12 14:35:30]     "pilotErrorDiag": "",
[2025-10-12 14:35:30]  *** Listing of results directory ***
[2025-10-12 14:35:30] total 416624
[2025-10-12 14:35:30] -rw-r--r-- 1 boinc boinc    557409 Oct 12 00:22 pilot3.tar.gz
[2025-10-12 14:35:30] -rw-r--r-- 1 boinc boinc      5112 Oct 12 00:25 queuedata.json
[2025-10-12 14:35:30] -rwx------ 1 boinc boinc     36292 Oct 12 00:26 runpilot2-wrapper.sh
[2025-10-12 14:35:30] -rw-r--r-- 1 boinc boinc       100 Oct 12 13:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 14:35:30] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 13:21 run_atlas
[2025-10-12 14:35:30] -rw-r--r-- 1 boinc boinc       105 Oct 12 13:21 job.xml
[2025-10-12 14:35:30] -rw-r--r-- 2 boinc boinc 219681725 Oct 12 13:21 EVNT.46676267._002658.pool.root.1
[2025-10-12 14:35:30] -rw-r--r-- 2 boinc boinc    569683 Oct 12 13:21 input.tar.gz
[2025-10-12 14:35:30] -rw-r--r-- 2 boinc boinc     15120 Oct 12 13:21 start_atlas.sh
[2025-10-12 14:35:30] drwxrwx--x 2 boinc boinc      4096 Oct 12 13:21 shared
[2025-10-12 14:35:30] -rw-r--r-- 1 boinc boinc         0 Oct 12 13:21 boinc_setup_complete
[2025-10-12 14:35:30] -rw-r--r-- 1 boinc boinc         0 Oct 12 13:21 boinc_lockfile
[2025-10-12 14:35:30] -rw-r--r-- 1 boinc boinc      2550 Oct 12 13:21 pandaJob.out
[2025-10-12 14:35:30] -rw------- 1 boinc boinc    975520 Oct 12 13:21 agis_schedconf.cvmfs.json
[2025-10-12 14:35:30] -rw------- 1 boinc boinc   1560580 Oct 12 13:21 agis_ddmendpoints.agis.ALL.json
[2025-10-12 14:35:30] drwx------ 5 boinc boinc      4096 Oct 12 13:21 pilot3
[2025-10-12 14:35:30] -rw-r--r-- 1 boinc boinc      6381 Oct 12 14:06 init_data.xml
[2025-10-12 14:35:30] -rw------- 1 boinc boinc 201239830 Oct 12 14:34 HITS.46676269._066116.pool.root.1
[2025-10-12 14:35:30] -rw-r--r-- 1 boinc boinc       529 Oct 12 14:34 boinc_task_state.xml
[2025-10-12 14:35:30] -rw------- 1 boinc boinc      1029 Oct 12 14:34 memory_monitor_summary.json
[2025-10-12 14:35:30] -rw------- 1 boinc boinc    254151 Oct 12 14:34 log.46676269._066116.job.log.tgz.1
[2025-10-12 14:35:30] -rw------- 1 boinc boinc      7776 Oct 12 14:34 heartbeat.json
[2025-10-12 14:35:30] -rw------- 1 boinc boinc        95 Oct 12 14:35 pilot_heartbeat.json
[2025-10-12 14:35:30] -rw-r--r-- 1 boinc boinc        27 Oct 12 14:35 wrapper_checkpoint.txt
[2025-10-12 14:35:30] -rw-r--r-- 1 boinc boinc      8192 Oct 12 14:35 boinc_mmap_file
[2025-10-12 14:35:30] -rw------- 1 boinc boinc      4821 Oct 12 14:35 pilotlog.txt
[2025-10-12 14:35:30] -rw------- 1 boinc boinc    649430 Oct 12 14:35 log.46676269._066116.job.log.1
[2025-10-12 14:35:30] -rw------- 1 boinc boinc       357 Oct 12 14:35 output.list
[2025-10-12 14:35:30] -rw-r--r-- 1 boinc boinc       620 Oct 12 14:35 runtime_log
[2025-10-12 14:35:30] -rw------- 1 boinc boinc    921600 Oct 12 14:35 result.tar.gz
[2025-10-12 14:35:30] -rw------- 1 boinc boinc       660 Oct 12 14:35 tskNDmDExR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmNiSMDmtu71dm.diag
[2025-10-12 14:35:30] -rw-r--r-- 1 boinc boinc      8782 Oct 12 14:35 runtime_log.err
[2025-10-12 14:35:30] -rw-r--r-- 1 boinc boinc      8365 Oct 12 14:35 stderr.txt
[2025-10-12 14:35:30] HITS file was successfully produced:
[2025-10-12 14:35:30] -rw------- 1 boinc boinc 201239830 Oct 12 14:34 shared/HITS.pool.root.1
[2025-10-12 14:35:30]  *** Contents of shared directory: ***
[2025-10-12 14:35:30] total 412544
[2025-10-12 14:35:30] -rw-r--r-- 2 boinc boinc 219681725 Oct 12 13:21 ATLAS.root_0
[2025-10-12 14:35:30] -rw-r--r-- 2 boinc boinc    569683 Oct 12 13:21 input.tar.gz
[2025-10-12 14:35:30] -rw-r--r-- 2 boinc boinc     15120 Oct 12 13:21 start_atlas.sh
[2025-10-12 14:35:30] -rw------- 1 boinc boinc 201239830 Oct 12 14:34 HITS.pool.root.1
[2025-10-12 14:35:30] -rw------- 1 boinc boinc    921600 Oct 12 14:35 result.tar.gz
14:35:31 (2941): run_atlas exited; CPU time 16571.624711
14:35:31 (2941): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN