Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:00:44 (108986): wrapper (7.7.26015): starting
00:00:44 (108986): wrapper: running run_atlas (--nthreads 9)
[2025-10-12 00:00:44] Arguments: --nthreads 9
[2025-10-12 00:00:44] Threads: 9
[2025-10-12 00:00:44] Checking for CVMFS
[2025-10-12 00:00:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 00:00:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 00:00:46] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 00:00:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 00:00:48] 2.13.2.0 981271 128755 273816 151606 3 343 31690565 32935936 35101 16776704 0 101808147 99.686 80496747 29682 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 00:00:48] CVMFS is ok
[2025-10-12 00:00:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 00:00:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 00:00:48] Further information can be found at the LHC@home message board.
[2025-10-12 00:00:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 00:00:48] Checking for apptainer binary...
[2025-10-12 00:00:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 00:00:48] Running /usr/bin/apptainer --version
[2025-10-12 00:00:48] apptainer version 1.4.3-1.el9
[2025-10-12 00:00:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 00:00:49] c-4-36.aglt2.org
[2025-10-12 00:00:49] apptainer works
[2025-10-12 00:00:50] Set ATHENA_PROC_NUMBER=9
[2025-10-12 00:00:50] Set ATHENA_CORE_NUMBER=9
[2025-10-12 00:00:50] Starting ATLAS job with PandaID=6838990537
[2025-10-12 00:00:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 01:45:31]  *** The last 200 lines of the pilot log: ***
[2025-10-13 01:45:32] 2025-10-13 05:44:07,761 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 01:45:32] 2025-10-13 05:44:07,846 | INFO     | time since job start (92466s) is within the limit (172800.0s)
[2025-10-13 01:45:32] 2025-10-13 05:44:08,222 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 01:45:32] 2025-10-13 05:44:08,244 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.1696249999986
[2025-10-13 01:45:32] 2025-10-13 05:44:08,260 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6838990537/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 01:45:32] 2025-10-13 05:44:08,276 | INFO     | extracted standard info from prmon json
[2025-10-13 01:45:32] 2025-10-13 05:44:08,276 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 01:45:32] 2025-10-13 05:44:08,276 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 01:45:32] 2025-10-13 05:44:08,277 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 01:45:32] 2025-10-13 05:44:08,277 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 01:45:32] 2025-10-13 05:44:08,367 | INFO     | fitting pss+swap vs Time
[2025-10-13 01:45:32] 2025-10-13 05:44:08,458 | INFO     | sum of square deviations: 1069709639462.3938
[2025-10-13 01:45:32] 2025-10-13 05:44:08,634 | INFO     | sum of deviations: 3341385807954.453
[2025-10-13 01:45:32] 2025-10-13 05:44:08,634 | INFO     | mean x: 1760288124.3514228
[2025-10-13 01:45:32] 2025-10-13 05:44:08,635 | INFO     | mean y: 2051075.3004632695
[2025-10-13 01:45:32] 2025-10-13 05:44:08,639 | INFO     | -- intersect: -5496452013.420544
[2025-10-13 01:45:32] 2025-10-13 05:44:08,642 | INFO     | intersect: -5496452013.420544
[2025-10-13 01:45:32] 2025-10-13 05:44:08,645 | INFO     | chi2: 15.520151342078863
[2025-10-13 01:45:32] 2025-10-13 05:44:08,647 | INFO     | sum of square deviations: 1059125445921.9788
[2025-10-13 01:45:32] 2025-10-13 05:44:08,777 | INFO     | sum of deviations: 3513227685625.1157
[2025-10-13 01:45:32] 2025-10-13 05:44:08,777 | INFO     | mean x: 1760287971.8519256
[2025-10-13 01:45:32] 2025-10-13 05:44:08,777 | INFO     | mean y: 2053547.2337317397
[2025-10-13 01:45:32] 2025-10-13 05:44:08,777 | INFO     | -- intersect: -5837002120.0574875
[2025-10-13 01:45:32] 2025-10-13 05:44:08,778 | INFO     | intersect: -5837002120.0574875
[2025-10-13 01:45:32] 2025-10-13 05:44:08,780 | INFO     | chi2: 14.073426712590637
[2025-10-13 01:45:32] 2025-10-13 05:44:08,780 | INFO     | current chi2=14.073426712590637 (change=9.321588414964795 %)
[2025-10-13 01:45:32] 2025-10-13 05:44:08,780 | INFO     | right removable region: 1505
[2025-10-13 01:45:32] 2025-10-13 05:44:08,786 | INFO     | sum of square deviations: 1059125213939.2744
[2025-10-13 01:45:32] 2025-10-13 05:44:08,912 | INFO     | sum of deviations: 2925959892497.632
[2025-10-13 01:45:32] 2025-10-13 05:44:08,913 | INFO     | mean x: 1760288276.8525896
[2025-10-13 01:45:32] 2025-10-13 05:44:08,913 | INFO     | mean y: 2057059.6334661355
[2025-10-13 01:45:32] 2025-10-13 05:44:08,913 | INFO     | -- intersect: -4860949532.521703
[2025-10-13 01:45:32] 2025-10-13 05:44:08,913 | INFO     | intersect: -4860949532.521703
[2025-10-13 01:45:32] 2025-10-13 05:44:08,919 | INFO     | chi2: 11.508025545127966
[2025-10-13 01:45:32] 2025-10-13 05:44:08,919 | INFO     | current chi2=11.508025545127966 (change=25.851073926534852 %)
[2025-10-13 01:45:32] 2025-10-13 05:44:08,922 | INFO     | sum of square deviations: 1048610927984.8573
[2025-10-13 01:45:32] 2025-10-13 05:44:09,055 | INFO     | sum of deviations: 2616463688126.699
[2025-10-13 01:45:32] 2025-10-13 05:44:09,055 | INFO     | mean x: 1760288429.353098
[2025-10-13 01:45:32] 2025-10-13 05:44:09,056 | INFO     | mean y: 2061548.2798134577
[2025-10-13 01:45:32] 2025-10-13 05:44:09,058 | INFO     | -- intersect: -4390159277.496734
[2025-10-13 01:45:32] 2025-10-13 05:44:09,059 | INFO     | intersect: -4390159277.496734
[2025-10-13 01:45:32] 2025-10-13 05:44:09,061 | INFO     | chi2: 9.405409334261595
[2025-10-13 01:45:32] 2025-10-13 05:44:09,062 | INFO     | current chi2=9.405409334261595 (change=18.270868470191516 %)
[2025-10-13 01:45:32] 2025-10-13 05:44:09,062 | INFO     | left removable region: 20
[2025-10-13 01:45:32] 2025-10-13 05:44:09,067 | INFO     | sum of square deviations: 1015434051675.913
[2025-10-13 01:45:32] 2025-10-13 05:44:09,134 | INFO     | sum of deviations: 2329318120847.841
[2025-10-13 01:45:32] 2025-10-13 05:44:09,135 | INFO     | mean x: 1760288551.3501685
[2025-10-13 01:45:32] 2025-10-13 05:44:09,135 | INFO     | mean y: 2070983.032996633
[2025-10-13 01:45:32] 2025-10-13 05:44:09,135 | INFO     | -- intersect: -4035879107.1906757
[2025-10-13 01:45:32] 2025-10-13 05:44:09,135 | INFO     | intersect: -4035879107.1906757
[2025-10-13 01:45:32] 2025-10-13 05:44:09,137 | INFO     | chi2: 5.5833393730943275
[2025-10-13 01:45:32] 2025-10-13 05:44:09,138 | INFO     | -- intersect: -4035879107.1906757
[2025-10-13 01:45:32] 2025-10-13 05:44:09,138 | INFO     | current memory leak: 2.29 B/s (using 1485 data points, chi2=5.58)
[2025-10-13 01:45:32] 2025-10-13 05:44:09,140 | INFO     | could have reported an average CPU frequency of 2600 MHz (53 samples)
[2025-10-13 01:45:32] 2025-10-13 05:44:09,140 | INFO     | ..............................
[2025-10-13 01:45:32] 2025-10-13 05:44:09,140 | INFO     | . Timing measurements:
[2025-10-13 01:45:32] 2025-10-13 05:44:09,140 | INFO     | . get job = 0 s
[2025-10-13 01:45:32] 2025-10-13 05:44:09,141 | INFO     | . initial setup = 9 s
[2025-10-13 01:45:32] 2025-10-13 05:44:09,141 | INFO     | . payload setup = 82 s
[2025-10-13 01:45:32] 2025-10-13 05:44:09,141 | INFO     | . stage-in = 0 s
[2025-10-13 01:45:32] 2025-10-13 05:44:09,141 | INFO     | . payload execution = 92187 s
[2025-10-13 01:45:32] 2025-10-13 05:44:09,141 | INFO     | . stage-out = 9 s
[2025-10-13 01:45:32] 2025-10-13 05:44:09,141 | INFO     | . log creation = 3 s
[2025-10-13 01:45:32] 2025-10-13 05:44:09,141 | INFO     | ..............................
[2025-10-13 01:45:32] 2025-10-13 05:44:09,836 | INFO     | 
[2025-10-13 01:45:32] 2025-10-13 05:44:09,837 | INFO     | job summary report
[2025-10-13 01:45:32] 2025-10-13 05:44:09,837 | INFO     | --------------------------------------------------
[2025-10-13 01:45:32] 2025-10-13 05:44:09,837 | INFO     | PanDA job id: 6838990537
[2025-10-13 01:45:32] 2025-10-13 05:44:09,838 | INFO     | task id: 46676269
[2025-10-13 01:45:32] 2025-10-13 05:44:09,838 | INFO     | errors: (none)
[2025-10-13 01:45:32] 2025-10-13 05:44:09,838 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 01:45:32] 2025-10-13 05:44:09,839 | INFO     | pilot state: finished 
[2025-10-13 01:45:32] 2025-10-13 05:44:09,839 | INFO     | transexitcode: 0
[2025-10-13 01:45:32] 2025-10-13 05:44:09,839 | INFO     | exeerrorcode: 0
[2025-10-13 01:45:32] 2025-10-13 05:44:09,840 | INFO     | exeerrordiag: 
[2025-10-13 01:45:32] 2025-10-13 05:44:09,840 | INFO     | exitcode: 0
[2025-10-13 01:45:32] 2025-10-13 05:44:09,840 | INFO     | exitmsg: OK
[2025-10-13 01:45:32] 2025-10-13 05:44:09,841 | INFO     | cpuconsumptiontime: 51693 s
[2025-10-13 01:45:32] 2025-10-13 05:44:09,841 | INFO     | nevents: 400
[2025-10-13 01:45:32] 2025-10-13 05:44:09,841 | INFO     | neventsw: 0
[2025-10-13 01:45:32] 2025-10-13 05:44:09,842 | INFO     | pid: 159541
[2025-10-13 01:45:32] 2025-10-13 05:44:09,842 | INFO     | pgrp: 159541
[2025-10-13 01:45:32] 2025-10-13 05:44:09,842 | INFO     | corecount: 9
[2025-10-13 01:45:32] 2025-10-13 05:44:09,842 | INFO     | event service: False
[2025-10-13 01:45:32] 2025-10-13 05:44:09,843 | INFO     | sizes: {0: 2348630, 1: 2348686, 2: 2348742, 3: 2348742, 5: 2348913, 6: 2348969, 18: 2349125, 30: 2349153, 41: 2349181, 53: 2349209, 61: 2349499, 65: 2349807, 92275
[2025-10-13 01:45:32] 2025-10-13 05:44:09,843 | INFO     | --------------------------------------------------
[2025-10-13 01:45:32] 2025-10-13 05:44:09,843 | INFO     | 
[2025-10-13 01:45:32] 2025-10-13 05:44:09,844 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-13 01:45:32] 2025-10-13 05:44:09,861 | INFO     | time since job start (92468s) is within the limit (172800.0s)
[2025-10-13 01:45:32] 2025-10-13 05:44:09,975 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 01:45:32] 2025-10-13 05:44:09,975 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 01:45:32] 2025-10-13 05:44:09,976 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 01:45:32] 2025-10-13 05:44:09,976 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 01:45:32] 2025-10-13 05:44:09,976 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 01:45:32] 2025-10-13 05:44:09,977 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 01:45:32] 2025-10-13 05:44:09,977 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 01:45:32] 2025-10-13 05:44:09,977 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 01:45:32] 2025-10-13 05:44:09,978 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 01:45:32] 2025-10-13 05:44:09,978 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 01:45:32] 2025-10-13 05:44:09,978 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 01:45:32] 2025-10-13 05:44:09,979 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 01:45:32] 2025-10-13 05:44:09,979 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 01:45:32] 2025-10-13 05:44:09,979 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 01:45:32] 2025-10-13 05:44:09,980 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 01:45:32] 2025-10-13 05:44:09,980 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 01:45:32] 2025-10-13 05:44:09,980 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 01:45:32] 2025-10-13 05:44:09,981 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 01:45:32] 2025-10-13 05:44:09,981 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 01:45:32] 2025-10-13 05:44:09,981 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 01:45:32] 2025-10-13 05:44:09,982 | INFO     | job 6838990537 has completed (purged errors)
[2025-10-13 01:45:32] 2025-10-13 05:44:09,982 | INFO     | overall cleanup function is called
[2025-10-13 01:45:32] 2025-10-13 05:44:11,009 | INFO     | --- collectZombieJob: --- 10, [159541]
[2025-10-13 01:45:32] 2025-10-13 05:44:11,009 | INFO     | zombie collector waiting for pid 159541
[2025-10-13 01:45:32] 2025-10-13 05:44:11,009 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 01:45:32] 2025-10-13 05:44:11,009 | INFO     | collected zombie processes
[2025-10-13 01:45:32] 2025-10-13 05:44:11,009 | INFO     | will attempt to kill all subprocesses of pid=159541
[2025-10-13 01:45:32] 2025-10-13 05:44:11,507 | INFO     | process IDs to be killed: [159541] (in reverse order)
[2025-10-13 01:45:32] 2025-10-13 05:44:12,608 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 01:45:32] 2025-10-13 05:44:12,608 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 01:45:32] 2025-10-13 05:44:12,621 | INFO     | did not find any defunct processes belonging to 159541
[2025-10-13 01:45:32] 2025-10-13 05:44:12,659 | INFO     | did not find any defunct processes belonging to 159541
[2025-10-13 01:45:32] 2025-10-13 05:44:12,659 | INFO     | ready for new job
[2025-10-13 01:45:32] 2025-10-13 05:44:12,659 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 01:45:32] 2025-10-13 05:44:12,713 | INFO     | ***************************************
[2025-10-13 01:45:32] 2025-10-13 05:44:12,714 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 01:45:32] 2025-10-13 05:44:12,714 | INFO     | ***************************************
[2025-10-13 01:45:32] 2025-10-13 05:44:12,714 | INFO     | 
[2025-10-13 01:45:32] 2025-10-13 05:44:12,731 | INFO     | architecture information:
[2025-10-13 01:45:32] 2025-10-13 05:44:12,739 | INFO     | executing command: cat /etc/os-release
[2025-10-13 01:45:32] 2025-10-13 05:44:12,770 | INFO     | cat /etc/os-release:
[2025-10-13 01:45:32] NAME="CentOS Linux"
[2025-10-13 01:45:32] VERSION="7 (Core)"
[2025-10-13 01:45:32] ID="centos"
[2025-10-13 01:45:32] ID_LIKE="rhel fedora"
[2025-10-13 01:45:32] VERSION_ID="7"
[2025-10-13 01:45:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 01:45:32] ANSI_COLOR="0;31"
[2025-10-13 01:45:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 01:45:32] HOME_URL="https://www.centos.org/"
[2025-10-13 01:45:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 01:45:32] 
[2025-10-13 01:45:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 01:45:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 01:45:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 01:45:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 01:45:32] 
[2025-10-13 01:45:32] 2025-10-13 05:44:12,770 | INFO     | ***************************************
[2025-10-13 01:45:32] 2025-10-13 05:44:13,276 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-13 01:45:32] 2025-10-13 05:44:13,484 | INFO     | sufficient remaining disk space (74454138880 B)
[2025-10-13 01:45:32] 2025-10-13 05:44:13,485 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 01:45:32] 2025-10-13 05:44:13,485 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 01:45:32] 2025-10-13 05:44:13,485 | INFO     | update_server=False
[2025-10-13 01:45:32] 2025-10-13 05:44:13,485 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 01:45:32] 2025-10-13 05:44:13,531 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 01:45:32] 2025-10-13 05:44:13,680 | INFO     | all payload control threads have been joined
[2025-10-13 01:45:32] 2025-10-13 05:44:13,735 | INFO     | all data control threads have been joined
[2025-10-13 01:45:32] 2025-10-13 05:44:13,926 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 01:45:32] 2025-10-13 05:44:13,926 | INFO     | aborting loop
[2025-10-13 01:45:32] 2025-10-13 05:44:14,112 | INFO     | all job control threads have been joined
[2025-10-13 01:45:32] 2025-10-13 05:44:14,491 | INFO     | [job] retrieve thread has finished
[2025-10-13 01:45:32] 2025-10-13 05:44:14,668 | INFO     | [job] validate thread has finished
[2025-10-13 01:45:32] 2025-10-13 05:44:14,687 | INFO     | [payload] control thread has finished
[2025-10-13 01:45:32] 2025-10-13 05:44:14,732 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 01:45:32] 2025-10-13 05:44:14,748 | INFO     | [data] control thread has finished
[2025-10-13 01:45:32] 2025-10-13 05:44:14,842 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 01:45:32] 2025-10-13 05:44:14,861 | INFO     | [data] copytool_in thread has finished
[2025-10-13 01:45:32] 2025-10-13 05:44:14,873 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 01:45:32] 2025-10-13 05:44:14,883 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 01:45:32] 2025-10-13 05:44:14,933 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 01:45:32] 2025-10-13 05:44:14,952 | INFO     | [job] job monitor thread has finished
[2025-10-13 01:45:32] 2025-10-13 05:44:14,966 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 01:45:32] 2025-10-13 05:44:15,118 | INFO     | [job] control thread has finished
[2025-10-13 01:45:32] 2025-10-13 05:44:15,432 | INFO     | [payload] validate_post thread has finished
[2025-10-13 01:45:32] 2025-10-13 05:44:15,433 | INFO     | [payload] failed_post thread has finished
[2025-10-13 01:45:32] 2025-10-13 05:44:15,957 | INFO     | [job] queue monitor thread has finished
[2025-10-13 01:45:32] 2025-10-13 05:44:16,796 | INFO     | [data] copytool_out thread has finished
[2025-10-13 01:45:32] 2025-10-13 05:44:17,588 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 01:45:32] 2025-10-13 05:44:45,220 | INFO     | PID=124675 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 01:45:32] 2025-10-13 05:44:45,221 | INFO     | .. there are 29 such processes running
[2025-10-13 01:45:32] 2025-10-13 05:44:45,222 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 01:45:32] 2025-10-13 05:44:45,222 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 01:45:32] 2025-10-13 05:44:45,222 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 01:45:32] 2025-10-13 05:44:51,074 | INFO     | [monitor] cgroup control has ended
[2025-10-13 01:45:32] 2025-10-13 05:44:52,341 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140679274350400)>', '<ExcThread(monitor, started 140678524806912)>']
[2025-10-13 01:45:32] 2025-10-13 05:44:53,268 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 01:45:32] 2025-10-13 05:44:53,268 | INFO     | [monitor] control thread has ended
[2025-10-13 01:45:32] 2025-10-13 05:44:57,398 | INFO     | all workflow threads have been joined
[2025-10-13 01:45:32] 2025-10-13 05:44:57,399 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 01:45:32] 2025-10-13 05:44:57,399 | INFO     | traces error code: 0
[2025-10-13 01:45:32] 2025-10-13 05:44:57,399 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 01:45:32] 2025-10-13 05:44:57,936 [wrapper] ==== pilot stdout END ====
[2025-10-13 01:45:32] 2025-10-13 05:44:58,001 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 01:45:32] 2025-10-13 05:44:58,069 [wrapper] pilotpid: 124675
[2025-10-13 01:45:32] 2025-10-13 05:44:58,189 [wrapper] Pilot exit status: 0
[2025-10-13 01:45:32] 2025-10-13 05:44:58,336 [wrapper] pandaids: 6838990537
[2025-10-13 01:45:32] 2025-10-13 05:44:58,955 [wrapper] cleanup supervisor_pilot  913766 124677
[2025-10-13 01:45:32] 2025-10-13 05:44:58,996 [wrapper] Test setup, not cleaning
[2025-10-13 01:45:32] 2025-10-13 05:44:59,031 [wrapper] apfmon messages muted
[2025-10-13 01:45:32] 2025-10-13 05:44:59,066 [wrapper] ==== wrapper stdout END ====
[2025-10-13 01:45:32] 2025-10-13 05:44:59,127 [wrapper] ==== wrapper stderr END ====
[2025-10-13 01:45:32]  *** Error codes and diagnostics ***
[2025-10-13 01:45:32]     "exeErrorCode": 0,
[2025-10-13 01:45:32]     "exeErrorDiag": "",
[2025-10-13 01:45:32]     "pilotErrorCode": 0,
[2025-10-13 01:45:32]     "pilotErrorDiag": "",
[2025-10-13 01:45:32]  *** Listing of results directory ***
[2025-10-13 01:45:32] total 435948
[2025-10-13 01:45:32] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 18:22 pilot3.tar.gz
[2025-10-13 01:45:32] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 18:47 queuedata.json
[2025-10-13 01:45:32] -rwx------. 1 boincer umatlas     36292 Oct 11 18:47 runpilot2-wrapper.sh
[2025-10-13 01:45:32] -rw-r--r--. 1 boincer umatlas       100 Oct 12 00:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 01:45:32] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 00:00 run_atlas
[2025-10-13 01:45:32] -rw-r--r--. 1 boincer umatlas       105 Oct 12 00:00 job.xml
[2025-10-13 01:45:32] -rw-r--r--. 2 boincer umatlas 221244500 Oct 12 00:00 EVNT.46676267._002661.pool.root.1
[2025-10-13 01:45:32] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:00 start_atlas.sh
[2025-10-13 01:45:32] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 00:00 shared
[2025-10-13 01:45:32] -rw-r--r--. 2 boincer umatlas    569677 Oct 12 00:00 input.tar.gz
[2025-10-13 01:45:32] -rw-r--r--. 1 boincer umatlas         0 Oct 12 00:00 boinc_lockfile
[2025-10-13 01:45:32] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 00:00 pandaJob.out
[2025-10-13 01:45:32] -rw-------. 1 boincer umatlas    975512 Oct 12 00:02 agis_schedconf.cvmfs.json
[2025-10-13 01:45:32] drwx------. 5 boincer umatlas      4096 Oct 12 00:03 pilot3
[2025-10-13 01:45:32] -rw-r--r--. 1 boincer umatlas      6658 Oct 13 01:36 init_data.xml
[2025-10-13 01:45:32] -rw-------. 1 boincer umatlas 196666175 Oct 13 01:40 HITS.46676269._066190.pool.root.1
[2025-10-13 01:45:32] -rw-r--r--. 1 boincer umatlas       531 Oct 13 01:41 boinc_task_state.xml
[2025-10-13 01:45:32] -rw-------. 1 boincer umatlas      1054 Oct 13 01:43 memory_monitor_summary.json
[2025-10-13 01:45:32] -rw-------. 1 boincer umatlas   1560580 Oct 13 01:43 agis_ddmendpoints.agis.ALL.json
[2025-10-13 01:45:32] -rw-------. 1 boincer umatlas   1428793 Oct 13 01:43 log.46676269._066190.job.log.tgz.1
[2025-10-13 01:45:32] -rw-------. 1 boincer umatlas      7839 Oct 13 01:44 heartbeat.json
[2025-10-13 01:45:32] -rw-------. 1 boincer umatlas        95 Oct 13 01:44 pilot_heartbeat.json
[2025-10-13 01:45:32] -rw-------. 1 boincer umatlas      4823 Oct 13 01:44 pilotlog.txt
[2025-10-13 01:45:32] -rw-------. 1 boincer umatlas  10869269 Oct 13 01:44 log.46676269._066190.job.log.1
[2025-10-13 01:45:32] -rw-------. 1 boincer umatlas       357 Oct 13 01:44 output.list
[2025-10-13 01:45:32] -rw-r--r--. 1 boincer umatlas       620 Oct 13 01:44 runtime_log
[2025-10-13 01:45:32] -rw-------. 1 boincer umatlas  12318720 Oct 13 01:44 result.tar.gz
[2025-10-13 01:45:32] -rw-r--r--. 1 boincer umatlas      8694 Oct 13 01:44 runtime_log.err
[2025-10-13 01:45:32] -rw-------. 1 boincer umatlas       659 Oct 13 01:44 ptELDm4XxR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmAphNDmYfamSo.diag
[2025-10-13 01:45:32] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 01:45 boinc_mmap_file
[2025-10-13 01:45:32] -rw-r--r--. 1 boincer umatlas        28 Oct 13 01:45 wrapper_checkpoint.txt
[2025-10-13 01:45:32] -rw-r--r--. 1 boincer umatlas     21251 Oct 13 01:45 stderr.txt
[2025-10-13 01:45:32] HITS file was successfully produced:
[2025-10-13 01:45:32] -rw-------. 1 boincer umatlas 196666175 Oct 13 01:40 shared/HITS.pool.root.1
[2025-10-13 01:45:32]  *** Contents of shared directory: ***
[2025-10-13 01:45:32] total 420732
[2025-10-13 01:45:32] -rw-r--r--. 2 boincer umatlas 221244500 Oct 12 00:00 ATLAS.root_0
[2025-10-13 01:45:32] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:00 start_atlas.sh
[2025-10-13 01:45:32] -rw-r--r--. 2 boincer umatlas    569677 Oct 12 00:00 input.tar.gz
[2025-10-13 01:45:32] -rw-------. 1 boincer umatlas 196666175 Oct 13 01:40 HITS.pool.root.1
[2025-10-13 01:45:32] -rw-------. 1 boincer umatlas  12318720 Oct 13 01:44 result.tar.gz
01:45:33 (108986): run_atlas exited; CPU time 56003.006158
01:45:33 (108986): called boinc_finish(0)

</stderr_txt>
]]>

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