Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:01 (113110): wrapper (7.7.26015): starting
00:01:01 (113110): wrapper: running run_atlas (--nthreads 9)
[2025-10-12 00:01:01] Arguments: --nthreads 9
[2025-10-12 00:01:01] Threads: 9
[2025-10-12 00:01:01] Checking for CVMFS
[2025-10-12 00:01:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 00:01:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 00:01:02] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 00:01:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 00:01:04] 2.13.2.0 981271 128755 274456 151606 3 343 31690565 32935936 35114 16776704 0 101811233 99.686 80496747 29682 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 00:01:04] CVMFS is ok
[2025-10-12 00:01:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 00:01:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 00:01:04] Further information can be found at the LHC@home message board.
[2025-10-12 00:01:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 00:01:04] Checking for apptainer binary...
[2025-10-12 00:01:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 00:01:04] Running /usr/bin/apptainer --version
[2025-10-12 00:01:04] apptainer version 1.4.3-1.el9
[2025-10-12 00:01:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 00:01:06] c-4-36.aglt2.org
[2025-10-12 00:01:06] apptainer works
[2025-10-12 00:01:06] Set ATHENA_PROC_NUMBER=9
[2025-10-12 00:01:06] Set ATHENA_CORE_NUMBER=9
[2025-10-12 00:01:06] Starting ATLAS job with PandaID=6838773113
[2025-10-12 00:01:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 01:44:38]  *** The last 200 lines of the pilot log: ***
[2025-10-13 01:44:39] 2025-10-13 05:43:59,983 | INFO     | time since job start (92436s) is within the limit (172800.0s)
[2025-10-13 01:44:39] 2025-10-13 05:44:00,111 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 01:44:39] 2025-10-13 05:44:00,163 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.169749999998
[2025-10-13 01:44:39] 2025-10-13 05:44:00,224 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6838773113/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 01:44:39] 2025-10-13 05:44:00,238 | INFO     | extracted standard info from prmon json
[2025-10-13 01:44:39] 2025-10-13 05:44:00,239 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 01:44:39] 2025-10-13 05:44:00,239 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 01:44:39] 2025-10-13 05:44:00,239 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 01:44:39] 2025-10-13 05:44:00,239 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 01:44:39] 2025-10-13 05:44:00,336 | INFO     | fitting pss+swap vs Time
[2025-10-13 01:44:39] 2025-10-13 05:44:00,338 | INFO     | sum of square deviations: 1069711270941.1844
[2025-10-13 01:44:39] 2025-10-13 05:44:00,453 | INFO     | sum of deviations: 2336548949010.5063
[2025-10-13 01:44:39] 2025-10-13 05:44:00,453 | INFO     | mean x: 1760288121.3282595
[2025-10-13 01:44:39] 2025-10-13 05:44:00,453 | INFO     | mean y: 2082588.2832561217
[2025-10-13 01:44:39] 2025-10-13 05:44:00,453 | INFO     | -- intersect: -3842879572.60564
[2025-10-13 01:44:39] 2025-10-13 05:44:00,454 | INFO     | intersect: -3842879572.60564
[2025-10-13 01:44:39] 2025-10-13 05:44:00,460 | INFO     | chi2: 15.068261791289592
[2025-10-13 01:44:39] 2025-10-13 05:44:00,466 | INFO     | sum of square deviations: 1059127066603.8005
[2025-10-13 01:44:39] 2025-10-13 05:44:00,581 | INFO     | sum of deviations: 2500301560815.0996
[2025-10-13 01:44:39] 2025-10-13 05:44:00,582 | INFO     | mean x: 1760287968.8286853
[2025-10-13 01:44:39] 2025-10-13 05:44:00,582 | INFO     | mean y: 2084942.775564409
[2025-10-13 01:44:39] 2025-10-13 05:44:00,582 | INFO     | -- intersect: -4153460595.3622394
[2025-10-13 01:44:39] 2025-10-13 05:44:00,582 | INFO     | intersect: -4153460595.3622394
[2025-10-13 01:44:39] 2025-10-13 05:44:00,588 | INFO     | chi2: 13.574343931308816
[2025-10-13 01:44:39] 2025-10-13 05:44:00,589 | INFO     | current chi2=13.574343931308816 (change=9.91433438490135 %)
[2025-10-13 01:44:39] 2025-10-13 05:44:00,589 | INFO     | right removable region: 1505
[2025-10-13 01:44:39] 2025-10-13 05:44:00,595 | INFO     | sum of square deviations: 1059126856093.143
[2025-10-13 01:44:39] 2025-10-13 05:44:00,701 | INFO     | sum of deviations: 1910854496060.4849
[2025-10-13 01:44:39] 2025-10-13 05:44:00,701 | INFO     | mean x: 1760288273.8293493
[2025-10-13 01:44:39] 2025-10-13 05:44:00,701 | INFO     | mean y: 2088720.6088977423
[2025-10-13 01:44:39] 2025-10-13 05:44:00,701 | INFO     | -- intersect: -3173786523.284976
[2025-10-13 01:44:39] 2025-10-13 05:44:00,702 | INFO     | intersect: -3173786523.284976
[2025-10-13 01:44:39] 2025-10-13 05:44:00,708 | INFO     | chi2: 10.947334737545564
[2025-10-13 01:44:39] 2025-10-13 05:44:00,708 | INFO     | current chi2=10.947334737545564 (change=27.348390350678564 %)
[2025-10-13 01:44:39] 2025-10-13 05:44:00,710 | INFO     | sum of square deviations: 1048612580935.7593
[2025-10-13 01:44:39] 2025-10-13 05:44:00,821 | INFO     | sum of deviations: 1583843212763.4436
[2025-10-13 01:44:39] 2025-10-13 05:44:00,822 | INFO     | mean x: 1760288426.32978
[2025-10-13 01:44:39] 2025-10-13 05:44:00,822 | INFO     | mean y: 2093463.146568954
[2025-10-13 01:44:39] 2025-10-13 05:44:00,822 | INFO     | -- intersect: -2656677685.7371264
[2025-10-13 01:44:39] 2025-10-13 05:44:00,822 | INFO     | intersect: -2656677685.7371264
[2025-10-13 01:44:39] 2025-10-13 05:44:00,828 | INFO     | chi2: 8.600914798044291
[2025-10-13 01:44:39] 2025-10-13 05:44:00,829 | INFO     | current chi2=8.600914798044291 (change=21.433709626635107 %)
[2025-10-13 01:44:39] 2025-10-13 05:44:00,829 | INFO     | left removable region: 20
[2025-10-13 01:44:39] 2025-10-13 05:44:00,835 | INFO     | sum of square deviations: 1015435164171.9752
[2025-10-13 01:44:39] 2025-10-13 05:44:01,243 | INFO     | sum of deviations: 1264789023727.275
[2025-10-13 01:44:39] 2025-10-13 05:44:01,243 | INFO     | mean x: 1760288548.329293
[2025-10-13 01:44:39] 2025-10-13 05:44:01,243 | INFO     | mean y: 2103056.1016835016
[2025-10-13 01:44:39] 2025-10-13 05:44:01,243 | INFO     | -- intersect: -2190448189.9792957
[2025-10-13 01:44:39] 2025-10-13 05:44:01,243 | INFO     | intersect: -2190448189.9792957
[2025-10-13 01:44:39] 2025-10-13 05:44:01,245 | INFO     | chi2: 4.470938767927441
[2025-10-13 01:44:39] 2025-10-13 05:44:01,252 | INFO     | -- intersect: -2190448189.9792957
[2025-10-13 01:44:39] 2025-10-13 05:44:01,252 | INFO     | current memory leak: 1.25 B/s (using 1485 data points, chi2=4.47)
[2025-10-13 01:44:39] 2025-10-13 05:44:01,260 | INFO     | could have reported an average CPU frequency of 2600 MHz (53 samples)
[2025-10-13 01:44:39] 2025-10-13 05:44:01,260 | INFO     | ..............................
[2025-10-13 01:44:39] 2025-10-13 05:44:01,260 | INFO     | . Timing measurements:
[2025-10-13 01:44:39] 2025-10-13 05:44:01,260 | INFO     | . get job = 1 s
[2025-10-13 01:44:39] 2025-10-13 05:44:01,260 | INFO     | . initial setup = 11 s
[2025-10-13 01:44:39] 2025-10-13 05:44:01,260 | INFO     | . payload setup = 68 s
[2025-10-13 01:44:39] 2025-10-13 05:44:01,261 | INFO     | . stage-in = 0 s
[2025-10-13 01:44:39] 2025-10-13 05:44:01,261 | INFO     | . payload execution = 92168 s
[2025-10-13 01:44:39] 2025-10-13 05:44:01,261 | INFO     | . stage-out = 7 s
[2025-10-13 01:44:39] 2025-10-13 05:44:01,261 | INFO     | . log creation = 2 s
[2025-10-13 01:44:39] 2025-10-13 05:44:01,261 | INFO     | ..............................
[2025-10-13 01:44:39] 2025-10-13 05:44:01,914 | INFO     | 
[2025-10-13 01:44:39] 2025-10-13 05:44:01,914 | INFO     | job summary report
[2025-10-13 01:44:39] 2025-10-13 05:44:01,914 | INFO     | --------------------------------------------------
[2025-10-13 01:44:39] 2025-10-13 05:44:01,914 | INFO     | PanDA job id: 6838773113
[2025-10-13 01:44:39] 2025-10-13 05:44:01,915 | INFO     | task id: 46676269
[2025-10-13 01:44:39] 2025-10-13 05:44:01,915 | INFO     | errors: (none)
[2025-10-13 01:44:39] 2025-10-13 05:44:01,915 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 01:44:39] 2025-10-13 05:44:01,915 | INFO     | pilot state: finished 
[2025-10-13 01:44:39] 2025-10-13 05:44:01,915 | INFO     | transexitcode: 0
[2025-10-13 01:44:39] 2025-10-13 05:44:01,915 | INFO     | exeerrorcode: 0
[2025-10-13 01:44:39] 2025-10-13 05:44:01,915 | INFO     | exeerrordiag: 
[2025-10-13 01:44:39] 2025-10-13 05:44:01,915 | INFO     | exitcode: 0
[2025-10-13 01:44:39] 2025-10-13 05:44:01,916 | INFO     | exitmsg: OK
[2025-10-13 01:44:39] 2025-10-13 05:44:01,916 | INFO     | cpuconsumptiontime: 53272 s
[2025-10-13 01:44:39] 2025-10-13 05:44:01,916 | INFO     | nevents: 400
[2025-10-13 01:44:39] 2025-10-13 05:44:01,916 | INFO     | neventsw: 0
[2025-10-13 01:44:39] 2025-10-13 05:44:01,916 | INFO     | pid: 161087
[2025-10-13 01:44:39] 2025-10-13 05:44:01,916 | INFO     | pgrp: 161087
[2025-10-13 01:44:39] 2025-10-13 05:44:01,916 | INFO     | corecount: 9
[2025-10-13 01:44:39] 2025-10-13 05:44:01,916 | INFO     | event service: False
[2025-10-13 01:44:39] 2025-10-13 05:44:01,916 | INFO     | sizes: {0: 2347978, 1: 2348579, 2: 2348663, 4: 2348719, 5: 2348719, 6: 2348918, 7: 2349074, 18: 2349102, 30: 2349130, 42: 2349158, 53: 2349214, 65: 2349812, 77: 23
[2025-10-13 01:44:39] 2025-10-13 05:44:01,917 | INFO     | --------------------------------------------------
[2025-10-13 01:44:39] 2025-10-13 05:44:01,917 | INFO     | 
[2025-10-13 01:44:39] 2025-10-13 05:44:01,917 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-13 01:44:39] 2025-10-13 05:44:02,005 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 01:44:39] 2025-10-13 05:44:02,006 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 01:44:39] 2025-10-13 05:44:02,006 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 01:44:39] 2025-10-13 05:44:02,006 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 01:44:39] 2025-10-13 05:44:02,006 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 01:44:39] 2025-10-13 05:44:02,006 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 01:44:39] 2025-10-13 05:44:02,006 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 01:44:39] 2025-10-13 05:44:02,006 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 01:44:39] 2025-10-13 05:44:02,007 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 01:44:39] 2025-10-13 05:44:02,007 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 01:44:39] 2025-10-13 05:44:02,007 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 01:44:39] 2025-10-13 05:44:02,007 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 01:44:39] 2025-10-13 05:44:02,007 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 01:44:39] 2025-10-13 05:44:02,007 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 01:44:39] 2025-10-13 05:44:02,007 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 01:44:39] 2025-10-13 05:44:02,007 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 01:44:39] 2025-10-13 05:44:02,008 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 01:44:39] 2025-10-13 05:44:02,012 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 01:44:39] 2025-10-13 05:44:02,012 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 01:44:39] 2025-10-13 05:44:02,012 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 01:44:39] 2025-10-13 05:44:02,012 | INFO     | job 6838773113 has completed (purged errors)
[2025-10-13 01:44:39] 2025-10-13 05:44:02,013 | INFO     | overall cleanup function is called
[2025-10-13 01:44:39] 2025-10-13 05:44:03,023 | INFO     | --- collectZombieJob: --- 10, [161087]
[2025-10-13 01:44:39] 2025-10-13 05:44:03,023 | INFO     | zombie collector waiting for pid 161087
[2025-10-13 01:44:39] 2025-10-13 05:44:03,023 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 01:44:39] 2025-10-13 05:44:03,023 | INFO     | collected zombie processes
[2025-10-13 01:44:39] 2025-10-13 05:44:03,023 | INFO     | will attempt to kill all subprocesses of pid=161087
[2025-10-13 01:44:39] 2025-10-13 05:44:06,426 | INFO     | process IDs to be killed: [161087] (in reverse order)
[2025-10-13 01:44:39] 2025-10-13 05:44:06,776 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 01:44:39] 2025-10-13 05:44:06,776 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 01:44:39] 2025-10-13 05:44:06,798 | INFO     | did not find any defunct processes belonging to 161087
[2025-10-13 01:44:39] 2025-10-13 05:44:06,822 | INFO     | did not find any defunct processes belonging to 161087
[2025-10-13 01:44:39] 2025-10-13 05:44:06,827 | INFO     | ready for new job
[2025-10-13 01:44:39] 2025-10-13 05:44:06,830 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 01:44:39] 2025-10-13 05:44:06,840 | INFO     | ***************************************
[2025-10-13 01:44:39] 2025-10-13 05:44:06,840 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 01:44:39] 2025-10-13 05:44:06,840 | INFO     | ***************************************
[2025-10-13 01:44:39] 2025-10-13 05:44:06,840 | INFO     | 
[2025-10-13 01:44:39] 2025-10-13 05:44:06,855 | INFO     | architecture information:
[2025-10-13 01:44:39] 2025-10-13 05:44:06,858 | INFO     | executing command: cat /etc/os-release
[2025-10-13 01:44:39] 2025-10-13 05:44:06,905 | INFO     | cat /etc/os-release:
[2025-10-13 01:44:39] NAME="CentOS Linux"
[2025-10-13 01:44:39] VERSION="7 (Core)"
[2025-10-13 01:44:39] ID="centos"
[2025-10-13 01:44:39] ID_LIKE="rhel fedora"
[2025-10-13 01:44:39] VERSION_ID="7"
[2025-10-13 01:44:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 01:44:39] ANSI_COLOR="0;31"
[2025-10-13 01:44:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 01:44:39] HOME_URL="https://www.centos.org/"
[2025-10-13 01:44:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 01:44:39] 
[2025-10-13 01:44:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 01:44:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 01:44:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 01:44:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 01:44:39] 
[2025-10-13 01:44:39] 2025-10-13 05:44:06,906 | INFO     | ***************************************
[2025-10-13 01:44:39] 2025-10-13 05:44:07,408 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-13 01:44:39] 2025-10-13 05:44:07,658 | INFO     | sufficient remaining disk space (74438410240 B)
[2025-10-13 01:44:39] 2025-10-13 05:44:07,659 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 01:44:39] 2025-10-13 05:44:07,659 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 01:44:39] 2025-10-13 05:44:07,659 | INFO     | update_server=False
[2025-10-13 01:44:39] 2025-10-13 05:44:07,659 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 01:44:39] 2025-10-13 05:44:07,662 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 01:44:39] 2025-10-13 05:44:07,751 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 01:44:39] 2025-10-13 05:44:07,751 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 01:44:39] 2025-10-13 05:44:07,751 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 01:44:39] 2025-10-13 05:44:07,751 | INFO     | will abort loop
[2025-10-13 01:44:39] 2025-10-13 05:44:07,810 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 01:44:39] 2025-10-13 05:44:08,406 | INFO     | all data control threads have been joined
[2025-10-13 01:44:39] 2025-10-13 05:44:08,667 | INFO     | [job] retrieve thread has finished
[2025-10-13 01:44:39] 2025-10-13 05:44:08,671 | INFO     | [job] queue monitor thread has finished
[2025-10-13 01:44:39] 2025-10-13 05:44:08,682 | INFO     | all payload control threads have been joined
[2025-10-13 01:44:39] 2025-10-13 05:44:08,798 | INFO     | [job] job monitor thread has finished
[2025-10-13 01:44:39] 2025-10-13 05:44:08,933 | INFO     | all job control threads have been joined
[2025-10-13 01:44:39] 2025-10-13 05:44:08,983 | INFO     | [payload] validate_post thread has finished
[2025-10-13 01:44:39] 2025-10-13 05:44:09,054 | INFO     | [payload] failed_post thread has finished
[2025-10-13 01:44:39] 2025-10-13 05:44:09,235 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 01:44:39] 2025-10-13 05:44:09,236 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 01:44:39] 2025-10-13 05:44:09,236 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 01:44:39] 2025-10-13 05:44:09,237 | INFO     | [job] validate thread has finished
[2025-10-13 01:44:39] 2025-10-13 05:44:09,412 | INFO     | [data] control thread has finished
[2025-10-13 01:44:39] 2025-10-13 05:44:09,688 | INFO     | [payload] control thread has finished
[2025-10-13 01:44:39] 2025-10-13 05:44:09,817 | INFO     | [data] copytool_out thread has finished
[2025-10-13 01:44:39] 2025-10-13 05:44:09,824 | INFO     | [data] copytool_in thread has finished
[2025-10-13 01:44:39] 2025-10-13 05:44:09,825 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 01:44:39] 2025-10-13 05:44:09,949 | INFO     | [job] control thread has finished
[2025-10-13 01:44:39] 2025-10-13 05:44:11,037 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 01:44:39] 2025-10-13 05:44:13,470 | INFO     | [monitor] cgroup control has ended
[2025-10-13 01:44:39] 2025-10-13 05:44:15,093 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 01:44:39] 2025-10-13 05:44:15,949 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139929587210048)>', '<ExcThread(monitor, started 139928826541824)>']
[2025-10-13 01:44:39] 2025-10-13 05:44:20,975 | INFO     | all workflow threads have been joined
[2025-10-13 01:44:39] 2025-10-13 05:44:20,975 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 01:44:39] 2025-10-13 05:44:20,975 | INFO     | traces error code: 0
[2025-10-13 01:44:39] 2025-10-13 05:44:20,976 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 01:44:39] 2025-10-13 05:44:36,100 | INFO     | PID=127126 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 01:44:39] 2025-10-13 05:44:36,100 | INFO     | .. there are 30 such processes running
[2025-10-13 01:44:39] 2025-10-13 05:44:36,100 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 01:44:39] 2025-10-13 05:44:36,100 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 01:44:39] 2025-10-13 05:44:36,101 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 01:44:39] 2025-10-13 05:44:36,101 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 01:44:39] 2025-10-13 05:44:36,101 | INFO     | [monitor] control thread has ended
[2025-10-13 01:44:39] 2025-10-13 05:44:36,599 [wrapper] ==== pilot stdout END ====
[2025-10-13 01:44:39] 2025-10-13 05:44:36,638 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 01:44:39] 2025-10-13 05:44:36,750 [wrapper] pilotpid: 127126
[2025-10-13 01:44:39] 2025-10-13 05:44:36,810 [wrapper] Pilot exit status: 0
[2025-10-13 01:44:39] 2025-10-13 05:44:36,989 [wrapper] pandaids: 6838773113
[2025-10-13 01:44:39] 2025-10-13 05:44:37,635 [wrapper] cleanup supervisor_pilot  913839 127129
[2025-10-13 01:44:39] 2025-10-13 05:44:37,674 [wrapper] Test setup, not cleaning
[2025-10-13 01:44:39] 2025-10-13 05:44:37,763 [wrapper] apfmon messages muted
[2025-10-13 01:44:39] 2025-10-13 05:44:37,807 [wrapper] ==== wrapper stdout END ====
[2025-10-13 01:44:39] 2025-10-13 05:44:37,851 [wrapper] ==== wrapper stderr END ====
[2025-10-13 01:44:39]  *** Error codes and diagnostics ***
[2025-10-13 01:44:39]     "exeErrorCode": 0,
[2025-10-13 01:44:39]     "exeErrorDiag": "",
[2025-10-13 01:44:39]     "pilotErrorCode": 0,
[2025-10-13 01:44:39]     "pilotErrorDiag": "",
[2025-10-13 01:44:39]  *** Listing of results directory ***
[2025-10-13 01:44:39] total 448996
[2025-10-13 01:44:39] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 14:14 pilot3.tar.gz
[2025-10-13 01:44:39] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 14:24 queuedata.json
[2025-10-13 01:44:39] -rwx------. 1 boincer umatlas     36292 Oct 11 14:24 runpilot2-wrapper.sh
[2025-10-13 01:44:39] -rw-r--r--. 1 boincer umatlas       100 Oct 12 00:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 01:44:39] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 00:00 run_atlas
[2025-10-13 01:44:39] -rw-r--r--. 1 boincer umatlas       105 Oct 12 00:00 job.xml
[2025-10-13 01:44:39] -rw-r--r--. 2 boincer umatlas 225262344 Oct 12 00:01 EVNT.46676267._002512.pool.root.1
[2025-10-13 01:44:39] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 00:01 shared
[2025-10-13 01:44:39] -rw-r--r--. 2 boincer umatlas    569687 Oct 12 00:01 input.tar.gz
[2025-10-13 01:44:39] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:01 start_atlas.sh
[2025-10-13 01:44:39] -rw-r--r--. 1 boincer umatlas         0 Oct 12 00:01 boinc_lockfile
[2025-10-13 01:44:39] -rw-r--r--. 1 boincer umatlas      2549 Oct 12 00:01 pandaJob.out
[2025-10-13 01:44:39] -rw-------. 1 boincer umatlas    975512 Oct 12 00:03 agis_schedconf.cvmfs.json
[2025-10-13 01:44:39] drwx------. 5 boincer umatlas      4096 Oct 12 00:03 pilot3
[2025-10-13 01:44:39] -rw-r--r--. 1 boincer umatlas      6657 Oct 13 01:36 init_data.xml
[2025-10-13 01:44:39] -rw-------. 1 boincer umatlas 205947495 Oct 13 01:40 HITS.46676269._062543.pool.root.1
[2025-10-13 01:44:39] -rw-r--r--. 1 boincer umatlas       530 Oct 13 01:41 boinc_task_state.xml
[2025-10-13 01:44:39] -rw-------. 1 boincer umatlas      1066 Oct 13 01:42 memory_monitor_summary.json
[2025-10-13 01:44:39] -rw-------. 1 boincer umatlas   1560580 Oct 13 01:43 agis_ddmendpoints.agis.ALL.json
[2025-10-13 01:44:39] -rw-------. 1 boincer umatlas   1448432 Oct 13 01:43 log.46676269._062543.job.log.tgz.1
[2025-10-13 01:44:39] -rw-------. 1 boincer umatlas        95 Oct 13 01:43 pilot_heartbeat.json
[2025-10-13 01:44:39] -rw-------. 1 boincer umatlas      7851 Oct 13 01:44 heartbeat.json
[2025-10-13 01:44:39] -rw-------. 1 boincer umatlas       822 Oct 13 01:44 pilotlog.txt
[2025-10-13 01:44:39] -rw-r--r--. 1 boincer umatlas        27 Oct 13 01:44 wrapper_checkpoint.txt
[2025-10-13 01:44:39] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 01:44 boinc_mmap_file
[2025-10-13 01:44:39] -rw-------. 1 boincer umatlas  10890033 Oct 13 01:44 log.46676269._062543.job.log.1
[2025-10-13 01:44:39] -rw-------. 1 boincer umatlas       357 Oct 13 01:44 output.list
[2025-10-13 01:44:39] -rw-r--r--. 1 boincer umatlas       620 Oct 13 01:44 runtime_log
[2025-10-13 01:44:39] -rw-------. 1 boincer umatlas  12359680 Oct 13 01:44 result.tar.gz
[2025-10-13 01:44:39] -rw-r--r--. 1 boincer umatlas      8694 Oct 13 01:44 runtime_log.err
[2025-10-13 01:44:39] -rw-------. 1 boincer umatlas       659 Oct 13 01:44 E99MDmpRtR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmjEhNDmG81pan.diag
[2025-10-13 01:44:39] -rw-r--r--. 1 boincer umatlas      2141 Oct 13 01:44 stderr.txt
[2025-10-13 01:44:39] HITS file was successfully produced:
[2025-10-13 01:44:39] -rw-------. 1 boincer umatlas 205947495 Oct 13 01:40 shared/HITS.pool.root.1
[2025-10-13 01:44:39]  *** Contents of shared directory: ***
[2025-10-13 01:44:39] total 433764
[2025-10-13 01:44:39] -rw-r--r--. 2 boincer umatlas 225262344 Oct 12 00:01 ATLAS.root_0
[2025-10-13 01:44:39] -rw-r--r--. 2 boincer umatlas    569687 Oct 12 00:01 input.tar.gz
[2025-10-13 01:44:39] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:01 start_atlas.sh
[2025-10-13 01:44:39] -rw-------. 1 boincer umatlas 205947495 Oct 13 01:40 HITS.pool.root.1
[2025-10-13 01:44:39] -rw-------. 1 boincer umatlas  12359680 Oct 13 01:44 result.tar.gz
01:44:40 (113110): run_atlas exited; CPU time 57544.367817
01:44:40 (113110): called boinc_finish(0)

</stderr_txt>
]]>

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