Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
01:47:33 (3259115): wrapper (7.7.26015): starting
01:47:33 (3259115): wrapper: running run_atlas (--nthreads 5)
[2025-10-12 01:47:33] Arguments: --nthreads 5
[2025-10-12 01:47:33] Threads: 5
[2025-10-12 01:47:33] Checking for CVMFS
[2025-10-12 01:47:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 01:47:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 01:47:34] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 01:47:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 01:47:34] 2.11.0.0 2490241 2734 102392 151609 0 188 2568247 4096001 6454 130560 0 13863088 99.997 234438 5511 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-12 01:47:34] CVMFS is ok
[2025-10-12 01:47:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 01:47:34] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-12 01:47:34] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-12 01:47:34] Further information can be found at the LHC@home message board.
[2025-10-12 01:47:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 01:47:34] Checking for apptainer binary...
[2025-10-12 01:47:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 01:47:34] Running /usr/bin/apptainer --version
[2025-10-12 01:47:34] apptainer version 1.4.3
[2025-10-12 01:47:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 01:47:34] x32-linux4
[2025-10-12 01:47:34] apptainer works
[2025-10-12 01:47:34] Set ATHENA_PROC_NUMBER=5
[2025-10-12 01:47:34] Set ATHENA_CORE_NUMBER=5
[2025-10-12 01:47:34] Starting ATLAS job with PandaID=6838850511
[2025-10-12 01:47:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 03:56:11]  *** The last 200 lines of the pilot log: ***
[2025-10-12 03:56:11] 2025-10-12 07:55:20,132 | INFO     | time since job start (7648s) is within the limit (172800.0s)
[2025-10-12 03:56:11] 2025-10-12 07:55:20,706 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 03:56:11] 2025-10-12 07:55:20,710 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3808.11028125
[2025-10-12 03:56:11] 2025-10-12 07:55:20,724 | INFO     | using path: /var/lib/boinc-client/slots/7/PanDA_Pilot-6838850511/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 03:56:11] 2025-10-12 07:55:20,724 | INFO     | extracted standard info from prmon json
[2025-10-12 03:56:11] 2025-10-12 07:55:20,724 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 03:56:11] 2025-10-12 07:55:20,724 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 03:56:11] 2025-10-12 07:55:20,725 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 03:56:11] 2025-10-12 07:55:20,725 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 03:56:11] 2025-10-12 07:55:20,726 | INFO     | fitting pss+swap vs Time
[2025-10-12 03:56:11] 2025-10-12 07:55:20,727 | INFO     | sum of square deviations: 605592750.0
[2025-10-12 03:56:11] 2025-10-12 07:55:20,727 | INFO     | sum of deviations: 17367396864.0
[2025-10-12 03:56:11] 2025-10-12 07:55:20,727 | INFO     | mean x: 1760251892.0
[2025-10-12 03:56:11] 2025-10-12 07:55:20,727 | INFO     | mean y: 2325507.184
[2025-10-12 03:56:11] 2025-10-12 07:55:20,727 | INFO     | -- intersect: -50478782777.1719
[2025-10-12 03:56:11] 2025-10-12 07:55:20,727 | INFO     | intersect: -50478782777.1719
[2025-10-12 03:56:11] 2025-10-12 07:55:20,732 | INFO     | chi2: 1.419474595304947
[2025-10-12 03:56:11] 2025-10-12 07:55:20,732 | INFO     | sum of square deviations: 535786790.0
[2025-10-12 03:56:11] 2025-10-12 07:55:20,732 | INFO     | sum of deviations: 16594422279.500002
[2025-10-12 03:56:11] 2025-10-12 07:55:20,732 | INFO     | mean x: 1760251739.5
[2025-10-12 03:56:11] 2025-10-12 07:55:20,732 | INFO     | mean y: 2323819.8583333334
[2025-10-12 03:56:11] 2025-10-12 07:55:20,732 | INFO     | -- intersect: -54516304165.51517
[2025-10-12 03:56:11] 2025-10-12 07:55:20,733 | INFO     | intersect: -54516304165.51517
[2025-10-12 03:56:11] 2025-10-12 07:55:20,733 | INFO     | chi2: 1.4211894872249557
[2025-10-12 03:56:11] 2025-10-12 07:55:20,733 | INFO     | current chi2=1.4211894872249557 (change=-0.12081173736260635 %)
[2025-10-12 03:56:11] 2025-10-12 07:55:20,733 | INFO     | right removable region: 119
[2025-10-12 03:56:11] 2025-10-12 07:55:20,733 | INFO     | sum of square deviations: 535786790.0
[2025-10-12 03:56:11] 2025-10-12 07:55:20,733 | INFO     | sum of deviations: 360912813.5
[2025-10-12 03:56:11] 2025-10-12 07:55:20,733 | INFO     | mean x: 1760252044.5
[2025-10-12 03:56:11] 2025-10-12 07:55:20,734 | INFO     | mean y: 2361949.325
[2025-10-12 03:56:11] 2025-10-12 07:55:20,734 | INFO     | -- intersect: -1183366272.622432
[2025-10-12 03:56:11] 2025-10-12 07:55:20,734 | INFO     | intersect: -1183366272.622432
[2025-10-12 03:56:11] 2025-10-12 07:55:20,734 | INFO     | chi2: 0.0035001249268401423
[2025-10-12 03:56:11] 2025-10-12 07:55:20,734 | INFO     | current chi2=0.0035001249268401423 (change=99.7534210940853 %)
[2025-10-12 03:56:11] 2025-10-12 07:55:20,734 | INFO     | sum of square deviations: 471562330.0
[2025-10-12 03:56:11] 2025-10-12 07:55:20,734 | INFO     | sum of deviations: 146495038.00000003
[2025-10-12 03:56:11] 2025-10-12 07:55:20,735 | INFO     | mean x: 1760252197.0
[2025-10-12 03:56:11] 2025-10-12 07:55:20,738 | INFO     | mean y: 2362440.747826087
[2025-10-12 03:56:11] 2025-10-12 07:55:20,738 | INFO     | -- intersect: -544475582.7412395
[2025-10-12 03:56:11] 2025-10-12 07:55:20,738 | INFO     | intersect: -544475582.7412395
[2025-10-12 03:56:11] 2025-10-12 07:55:20,738 | INFO     | chi2: 0.0031283425077099215
[2025-10-12 03:56:11] 2025-10-12 07:55:20,738 | INFO     | current chi2=0.0031283425077099215 (change=10.6219756980463 %)
[2025-10-12 03:56:11] 2025-10-12 07:55:20,738 | INFO     | left removable region: 20
[2025-10-12 03:56:11] 2025-10-12 07:55:20,738 | INFO     | sum of square deviations: 300842850.0
[2025-10-12 03:56:11] 2025-10-12 07:55:20,739 | INFO     | sum of deviations: 880214384.0000001
[2025-10-12 03:56:11] 2025-10-12 07:55:20,739 | INFO     | mean x: 1760252319.0
[2025-10-12 03:56:11] 2025-10-12 07:55:20,739 | INFO     | mean y: 2359807.414141414
[2025-10-12 03:56:11] 2025-10-12 07:55:20,739 | INFO     | -- intersect: -5147835421.2680645
[2025-10-12 03:56:11] 2025-10-12 07:55:20,739 | INFO     | intersect: -5147835421.2680645
[2025-10-12 03:56:11] 2025-10-12 07:55:20,739 | INFO     | chi2: 0.001417872713244204
[2025-10-12 03:56:11] 2025-10-12 07:55:20,739 | INFO     | -- intersect: -5147835421.2680645
[2025-10-12 03:56:11] 2025-10-12 07:55:20,739 | INFO     | current memory leak: 2.93 B/s (using 99 data points, chi2=0.00)
[2025-10-12 03:56:11] 2025-10-12 07:55:20,739 | INFO     | could have reported an average CPU frequency of 3804 MHz (8 samples)
[2025-10-12 03:56:11] 2025-10-12 07:55:20,740 | INFO     | ..............................
[2025-10-12 03:56:11] 2025-10-12 07:55:20,740 | INFO     | . Timing measurements:
[2025-10-12 03:56:11] 2025-10-12 07:55:20,740 | INFO     | . get job = 0 s
[2025-10-12 03:56:11] 2025-10-12 07:55:20,740 | INFO     | . initial setup = 2 s
[2025-10-12 03:56:11] 2025-10-12 07:55:20,740 | INFO     | . payload setup = 10 s
[2025-10-12 03:56:11] 2025-10-12 07:55:20,740 | INFO     | . stage-in = 0 s
[2025-10-12 03:56:11] 2025-10-12 07:55:20,740 | INFO     | . payload execution = 7596 s
[2025-10-12 03:56:11] 2025-10-12 07:55:20,740 | INFO     | . stage-out = 0 s
[2025-10-12 03:56:11] 2025-10-12 07:55:20,740 | INFO     | . log creation = 0 s
[2025-10-12 03:56:11] 2025-10-12 07:55:20,740 | INFO     | ..............................
[2025-10-12 03:56:11] 2025-10-12 07:55:20,849 | INFO     | 
[2025-10-12 03:56:11] 2025-10-12 07:55:20,850 | INFO     | job summary report
[2025-10-12 03:56:11] 2025-10-12 07:55:20,850 | INFO     | --------------------------------------------------
[2025-10-12 03:56:11] 2025-10-12 07:55:20,850 | INFO     | PanDA job id: 6838850511
[2025-10-12 03:56:11] 2025-10-12 07:55:20,850 | INFO     | task id: 46676269
[2025-10-12 03:56:11] 2025-10-12 07:55:20,850 | INFO     | errors: (none)
[2025-10-12 03:56:11] 2025-10-12 07:55:20,850 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 03:56:11] 2025-10-12 07:55:20,850 | INFO     | pilot state: finished 
[2025-10-12 03:56:11] 2025-10-12 07:55:20,850 | INFO     | transexitcode: 0
[2025-10-12 03:56:11] 2025-10-12 07:55:20,850 | INFO     | exeerrorcode: 0
[2025-10-12 03:56:11] 2025-10-12 07:55:20,850 | INFO     | exeerrordiag: 
[2025-10-12 03:56:11] 2025-10-12 07:55:20,850 | INFO     | exitcode: 0
[2025-10-12 03:56:11] 2025-10-12 07:55:20,850 | INFO     | exitmsg: OK
[2025-10-12 03:56:11] 2025-10-12 07:55:20,850 | INFO     | cpuconsumptiontime: 29842 s
[2025-10-12 03:56:11] 2025-10-12 07:55:20,850 | INFO     | nevents: 400
[2025-10-12 03:56:11] 2025-10-12 07:55:20,850 | INFO     | neventsw: 0
[2025-10-12 03:56:11] 2025-10-12 07:55:20,850 | INFO     | pid: 3269603
[2025-10-12 03:56:11] 2025-10-12 07:55:20,850 | INFO     | pgrp: 3269603
[2025-10-12 03:56:11] 2025-10-12 07:55:20,850 | INFO     | corecount: 5
[2025-10-12 03:56:11] 2025-10-12 07:55:20,851 | INFO     | event service: False
[2025-10-12 03:56:11] 2025-10-12 07:55:20,851 | INFO     | sizes: {0: 2348721, 1: 2348920, 9: 2349182, 11: 2349210, 7610: 2376748, 7613: 2385760, 7615: 2385944, 7630: 2386138}
[2025-10-12 03:56:11] 2025-10-12 07:55:20,851 | INFO     | --------------------------------------------------
[2025-10-12 03:56:11] 2025-10-12 07:55:20,851 | INFO     | 
[2025-10-12 03:56:11] 2025-10-12 07:55:20,851 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/7
[2025-10-12 03:56:11] 2025-10-12 07:55:20,876 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 03:56:11] 2025-10-12 07:55:20,876 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 03:56:11] 2025-10-12 07:55:20,876 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 03:56:11] 2025-10-12 07:55:20,876 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 03:56:11] 2025-10-12 07:55:20,877 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 03:56:11] 2025-10-12 07:55:20,877 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 03:56:11] 2025-10-12 07:55:20,877 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 03:56:11] 2025-10-12 07:55:20,877 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 03:56:11] 2025-10-12 07:55:20,877 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 03:56:11] 2025-10-12 07:55:20,877 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 03:56:11] 2025-10-12 07:55:20,877 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 03:56:11] 2025-10-12 07:55:20,877 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 03:56:11] 2025-10-12 07:55:20,877 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 03:56:11] 2025-10-12 07:55:20,877 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 03:56:11] 2025-10-12 07:55:20,877 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 03:56:11] 2025-10-12 07:55:20,877 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 03:56:11] 2025-10-12 07:55:20,877 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 03:56:11] 2025-10-12 07:55:20,877 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 03:56:11] 2025-10-12 07:55:20,877 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 03:56:11] 2025-10-12 07:55:20,878 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 03:56:11] 2025-10-12 07:55:20,878 | INFO     | job 6838850511 has completed (purged errors)
[2025-10-12 03:56:11] 2025-10-12 07:55:20,878 | INFO     | overall cleanup function is called
[2025-10-12 03:56:11] 2025-10-12 07:55:21,358 | INFO     | PID=3262958 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 03:56:11] 2025-10-12 07:55:21,358 | INFO     | .. there are 8 such processes running
[2025-10-12 03:56:11] 2025-10-12 07:55:21,891 | INFO     | --- collectZombieJob: --- 10, [3269603]
[2025-10-12 03:56:11] 2025-10-12 07:55:21,891 | INFO     | zombie collector waiting for pid 3269603
[2025-10-12 03:56:11] 2025-10-12 07:55:21,891 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 03:56:11] 2025-10-12 07:55:21,891 | INFO     | collected zombie processes
[2025-10-12 03:56:11] 2025-10-12 07:55:21,891 | INFO     | will attempt to kill all subprocesses of pid=3269603
[2025-10-12 03:56:11] 2025-10-12 07:55:22,191 | INFO     | process IDs to be killed: [3269603] (in reverse order)
[2025-10-12 03:56:11] 2025-10-12 07:55:22,287 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 03:56:11] 2025-10-12 07:55:22,287 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 03:56:11] 2025-10-12 07:55:22,295 | INFO     | did not find any defunct processes belonging to 3269603
[2025-10-12 03:56:11] 2025-10-12 07:55:22,300 | INFO     | did not find any defunct processes belonging to 3269603
[2025-10-12 03:56:11] 2025-10-12 07:55:22,307 | INFO     | ready for new job
[2025-10-12 03:56:11] 2025-10-12 07:55:22,307 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 03:56:11] 2025-10-12 07:55:22,308 | INFO     | ***************************************
[2025-10-12 03:56:11] 2025-10-12 07:55:22,308 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 03:56:11] 2025-10-12 07:55:22,308 | INFO     | ***************************************
[2025-10-12 03:56:11] 2025-10-12 07:55:22,308 | INFO     | 
[2025-10-12 03:56:11] 2025-10-12 07:55:22,310 | INFO     | architecture information:
[2025-10-12 03:56:11] 2025-10-12 07:55:22,314 | INFO     | executing command: cat /etc/os-release
[2025-10-12 03:56:11] 2025-10-12 07:55:22,334 | INFO     | cat /etc/os-release:
[2025-10-12 03:56:11] NAME="CentOS Linux"
[2025-10-12 03:56:11] VERSION="7 (Core)"
[2025-10-12 03:56:11] ID="centos"
[2025-10-12 03:56:11] ID_LIKE="rhel fedora"
[2025-10-12 03:56:11] VERSION_ID="7"
[2025-10-12 03:56:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 03:56:11] ANSI_COLOR="0;31"
[2025-10-12 03:56:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 03:56:11] HOME_URL="https://www.centos.org/"
[2025-10-12 03:56:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 03:56:11] 
[2025-10-12 03:56:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 03:56:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 03:56:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 03:56:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 03:56:11] 
[2025-10-12 03:56:11] 2025-10-12 07:55:22,335 | INFO     | ***************************************
[2025-10-12 03:56:11] 2025-10-12 07:55:22,837 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/7
[2025-10-12 03:56:11] 2025-10-12 07:55:22,857 | INFO     | sufficient remaining disk space (149095972864 B)
[2025-10-12 03:56:11] 2025-10-12 07:55:22,857 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 03:56:11] 2025-10-12 07:55:22,857 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 03:56:11] 2025-10-12 07:55:22,857 | INFO     | update_server=False
[2025-10-12 03:56:11] 2025-10-12 07:55:22,857 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 03:56:11] 2025-10-12 07:55:22,859 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 03:56:11] 2025-10-12 07:55:22,859 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 03:56:11] 2025-10-12 07:55:22,859 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 03:56:11] 2025-10-12 07:55:22,863 | INFO     | aborting loop
[2025-10-12 03:56:11] 2025-10-12 07:55:22,873 | INFO     | all data control threads have been joined
[2025-10-12 03:56:11] 2025-10-12 07:55:23,864 | INFO     | [job] queue monitor thread has finished
[2025-10-12 03:56:11] 2025-10-12 07:55:23,867 | INFO     | [job] retrieve thread has finished
[2025-10-12 03:56:11] 2025-10-12 07:55:23,868 | INFO     | [job] job monitor thread has finished
[2025-10-12 03:56:11] 2025-10-12 07:55:23,878 | INFO     | [data] control thread has finished
[2025-10-12 03:56:11] 2025-10-12 07:55:24,048 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 03:56:11] 2025-10-12 07:55:24,175 | INFO     | [data] copytool_in thread has finished
[2025-10-12 03:56:11] 2025-10-12 07:55:24,270 | INFO     | all payload control threads have been joined
[2025-10-12 03:56:11] 2025-10-12 07:55:24,288 | INFO     | all job control threads have been joined
[2025-10-12 03:56:11] 2025-10-12 07:55:24,733 | INFO     | [job] validate thread has finished
[2025-10-12 03:56:11] 2025-10-12 07:55:24,864 | INFO     | [data] copytool_out thread has finished
[2025-10-12 03:56:11] 2025-10-12 07:55:25,003 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 03:56:11] 2025-10-12 07:55:25,140 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 03:56:11] 2025-10-12 07:55:25,275 | INFO     | [payload] control thread has finished
[2025-10-12 03:56:11] 2025-10-12 07:55:25,292 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 03:56:11] 2025-10-12 07:55:25,293 | INFO     | [job] control thread has finished
[2025-10-12 03:56:11] 2025-10-12 07:55:25,319 | INFO     | [payload] validate_post thread has finished
[2025-10-12 03:56:11] 2025-10-12 07:55:25,453 | INFO     | [payload] failed_post thread has finished
[2025-10-12 03:56:11] 2025-10-12 07:55:25,984 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 03:56:11] 2025-10-12 07:55:29,989 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 03:56:11] 2025-10-12 07:55:53,639 | INFO     | PID=3262958 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 03:56:11] 2025-10-12 07:55:53,639 | INFO     | .. there are 8 such processes running
[2025-10-12 03:56:11] 2025-10-12 07:55:53,639 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 03:56:11] 2025-10-12 07:55:53,639 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 03:56:11] 2025-10-12 07:55:53,640 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 03:56:11] 2025-10-12 07:56:04,575 | INFO     | [monitor] cgroup control has ended
[2025-10-12 03:56:11] 2025-10-12 07:56:06,491 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139175636051776)>', '<ExcThread(monitor, started 139175286253312)>']
[2025-10-12 03:56:11] 2025-10-12 07:56:06,707 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 03:56:11] 2025-10-12 07:56:06,707 | INFO     | [monitor] control thread has ended
[2025-10-12 03:56:11] 2025-10-12 07:56:11,516 | INFO     | all workflow threads have been joined
[2025-10-12 03:56:11] 2025-10-12 07:56:11,516 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 03:56:11] 2025-10-12 07:56:11,516 | INFO     | traces error code: 0
[2025-10-12 03:56:11] 2025-10-12 07:56:11,516 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 03:56:11] 2025-10-12 07:56:11,680 [wrapper] ==== pilot stdout END ====
[2025-10-12 03:56:11] 2025-10-12 07:56:11,685 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 03:56:11] 2025-10-12 07:56:11,690 [wrapper] pilotpid: 3262958
[2025-10-12 03:56:11] 2025-10-12 07:56:11,694 [wrapper] Pilot exit status: 0
[2025-10-12 03:56:11] 2025-10-12 07:56:11,711 [wrapper] pandaids: 6838850511
[2025-10-12 03:56:11] 2025-10-12 07:56:11,787 [wrapper] cleanup supervisor_pilot 3465361 3262959
[2025-10-12 03:56:11] 2025-10-12 07:56:11,794 [wrapper] Test setup, not cleaning
[2025-10-12 03:56:11] 2025-10-12 07:56:11,798 [wrapper] apfmon messages muted
[2025-10-12 03:56:11] 2025-10-12 07:56:11,803 [wrapper] ==== wrapper stdout END ====
[2025-10-12 03:56:11] 2025-10-12 07:56:11,807 [wrapper] ==== wrapper stderr END ====
[2025-10-12 03:56:11]  *** Error codes and diagnostics ***
[2025-10-12 03:56:11]     "exeErrorCode": 0,
[2025-10-12 03:56:11]     "exeErrorDiag": "",
[2025-10-12 03:56:11]     "pilotErrorCode": 0,
[2025-10-12 03:56:11]     "pilotErrorDiag": "",
[2025-10-12 03:56:11]  *** Listing of results directory ***
[2025-10-12 03:56:11] total 417952
[2025-10-12 03:56:11] -rw-r--r-- 1 boinc boinc    557409 Oct 11 14:56 pilot3.tar.gz
[2025-10-12 03:56:11] -rw-r--r-- 1 boinc boinc      5112 Oct 11 14:58 queuedata.json
[2025-10-12 03:56:11] -rwx------ 1 boinc boinc     36292 Oct 11 15:01 runpilot2-wrapper.sh
[2025-10-12 03:56:11] -rw-r--r-- 1 boinc boinc       100 Oct 12 01:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 03:56:11] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 01:47 run_atlas
[2025-10-12 03:56:11] -rw-r--r-- 1 boinc boinc       105 Oct 12 01:47 job.xml
[2025-10-12 03:56:11] -rw-r--r-- 2 boinc boinc 221713204 Oct 12 01:47 EVNT.46676267._002539.pool.root.1
[2025-10-12 03:56:11] -rw-r--r-- 2 boinc boinc     15120 Oct 12 01:47 start_atlas.sh
[2025-10-12 03:56:11] drwxrwx--x 2 boinc boinc      4096 Oct 12 01:47 shared
[2025-10-12 03:56:11] -rw-r--r-- 2 boinc boinc    569679 Oct 12 01:47 input.tar.gz
[2025-10-12 03:56:11] -rw-r--r-- 1 boinc boinc      9723 Oct 12 01:47 init_data.xml
[2025-10-12 03:56:11] -rw-r--r-- 1 boinc boinc         0 Oct 12 01:47 boinc_setup_complete
[2025-10-12 03:56:11] -rw-r--r-- 1 boinc boinc         0 Oct 12 01:47 boinc_lockfile
[2025-10-12 03:56:11] -rw-r--r-- 1 boinc boinc      2550 Oct 12 01:47 pandaJob.out
[2025-10-12 03:56:11] -rw------- 1 boinc boinc    975528 Oct 12 01:47 agis_schedconf.cvmfs.json
[2025-10-12 03:56:11] -rw------- 1 boinc boinc   1560580 Oct 12 01:47 agis_ddmendpoints.agis.ALL.json
[2025-10-12 03:56:11] drwx------ 5 boinc boinc      4096 Oct 12 01:47 pilot3
[2025-10-12 03:56:11] -rw------- 1 boinc boinc 199494592 Oct 12 03:54 HITS.46676269._063187.pool.root.1
[2025-10-12 03:56:11] -rw-r--r-- 1 boinc boinc       530 Oct 12 03:54 boinc_task_state.xml
[2025-10-12 03:56:11] -rw------- 1 boinc boinc        95 Oct 12 03:54 pilot_heartbeat.json
[2025-10-12 03:56:11] -rw------- 1 boinc boinc      1025 Oct 12 03:54 memory_monitor_summary.json
[2025-10-12 03:56:11] -rw------- 1 boinc boinc    319195 Oct 12 03:55 log.46676269._063187.job.log.tgz.1
[2025-10-12 03:56:11] -rw------- 1 boinc boinc      7742 Oct 12 03:55 heartbeat.json
[2025-10-12 03:56:11] -rw-r--r-- 1 boinc boinc        27 Oct 12 03:56 wrapper_checkpoint.txt
[2025-10-12 03:56:11] -rw-r--r-- 1 boinc boinc      8192 Oct 12 03:56 boinc_mmap_file
[2025-10-12 03:56:11] -rw------- 1 boinc boinc      4831 Oct 12 03:56 pilotlog.txt
[2025-10-12 03:56:11] -rw------- 1 boinc boinc   1111712 Oct 12 03:56 log.46676269._063187.job.log.1
[2025-10-12 03:56:11] -rw------- 1 boinc boinc       357 Oct 12 03:56 output.list
[2025-10-12 03:56:11] -rw-r--r-- 1 boinc boinc       620 Oct 12 03:56 runtime_log
[2025-10-12 03:56:11] -rw------- 1 boinc boinc   1454080 Oct 12 03:56 result.tar.gz
[2025-10-12 03:56:11] -rw-r--r-- 1 boinc boinc      8764 Oct 12 03:56 runtime_log.err
[2025-10-12 03:56:11] -rw------- 1 boinc boinc       644 Oct 12 03:56 fmfMDmA1tR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmcLhNDmi3vzWm.diag
[2025-10-12 03:56:11] -rw-r--r-- 1 boinc boinc     21261 Oct 12 03:56 stderr.txt
[2025-10-12 03:56:11] HITS file was successfully produced:
[2025-10-12 03:56:11] -rw------- 1 boinc boinc 199494592 Oct 12 03:54 shared/HITS.pool.root.1
[2025-10-12 03:56:11]  *** Contents of shared directory: ***
[2025-10-12 03:56:11] total 413344
[2025-10-12 03:56:11] -rw-r--r-- 2 boinc boinc 221713204 Oct 12 01:47 ATLAS.root_0
[2025-10-12 03:56:11] -rw-r--r-- 2 boinc boinc     15120 Oct 12 01:47 start_atlas.sh
[2025-10-12 03:56:11] -rw-r--r-- 2 boinc boinc    569679 Oct 12 01:47 input.tar.gz
[2025-10-12 03:56:11] -rw------- 1 boinc boinc 199494592 Oct 12 03:54 HITS.pool.root.1
[2025-10-12 03:56:11] -rw------- 1 boinc boinc   1454080 Oct 12 03:56 result.tar.gz
03:56:13 (3259115): run_atlas exited; CPU time 29948.666989
03:56:13 (3259115): called boinc_finish(0)

</stderr_txt>
]]>

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