Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
14:36:01 (3381698): wrapper (7.7.26015): starting
14:36:01 (3381698): wrapper: running run_atlas (--nthreads 4)
[2025-10-12 14:36:01] Arguments: --nthreads 4
[2025-10-12 14:36:01] Threads: 4
[2025-10-12 14:36:01] Checking for CVMFS
[2025-10-12 14:36:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 14:36:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 14:36:01] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 14:36:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 14:36:01] 2.9.2.0 1879706 4253 96160 151620 2 56 22109074 36864001 0 130560 0 3734580 99.992 145625 811 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-12 14:36:01] CVMFS is ok
[2025-10-12 14:36:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 14:36:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 14:36:01] Further information can be found at the LHC@home message board.
[2025-10-12 14:36:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 14:36:01] Checking for apptainer binary...
[2025-10-12 14:36:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 14:36:01] Running /usr/bin/apptainer --version
[2025-10-12 14:36:01] apptainer version 1.4.1-1.1
[2025-10-12 14:36:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 14:36:01] thA317
[2025-10-12 14:36:01] apptainer works
[2025-10-12 14:36:01] Set ATHENA_PROC_NUMBER=4
[2025-10-12 14:36:01] Set ATHENA_CORE_NUMBER=4
[2025-10-12 14:36:01] Starting ATLAS job with PandaID=6838990524
[2025-10-12 14:36:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 15:50:27]  *** The last 200 lines of the pilot log: ***
[2025-10-12 15:50:27] 2025-10-12 13:49:56,606 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 15:50:27] 2025-10-12 13:49:56,606 | INFO     | ***************************************
[2025-10-12 15:50:27] 2025-10-12 13:49:56,606 | INFO     | 
[2025-10-12 15:50:27] 2025-10-12 13:49:56,606 | INFO     | architecture information:
[2025-10-12 15:50:27] 2025-10-12 13:49:56,606 | INFO     | executing command: cat /etc/os-release
[2025-10-12 15:50:27] 2025-10-12 13:49:56,622 | INFO     | cat /etc/os-release:
[2025-10-12 15:50:27] NAME="CentOS Linux"
[2025-10-12 15:50:27] VERSION="7 (Core)"
[2025-10-12 15:50:27] ID="centos"
[2025-10-12 15:50:27] ID_LIKE="rhel fedora"
[2025-10-12 15:50:27] VERSION_ID="7"
[2025-10-12 15:50:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 15:50:27] ANSI_COLOR="0;31"
[2025-10-12 15:50:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 15:50:27] HOME_URL="https://www.centos.org/"
[2025-10-12 15:50:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 15:50:27] 
[2025-10-12 15:50:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 15:50:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 15:50:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 15:50:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 15:50:27] 
[2025-10-12 15:50:27] 2025-10-12 13:49:56,622 | INFO     | ***************************************
[2025-10-12 15:50:27] 2025-10-12 13:49:57,125 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-12 15:50:27] 2025-10-12 13:49:57,143 | INFO     | sufficient remaining disk space (237583204352 B)
[2025-10-12 15:50:27] 2025-10-12 13:49:57,143 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 15:50:27] 2025-10-12 13:49:57,144 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 15:50:27] 2025-10-12 13:49:57,144 | INFO     | update_server=False
[2025-10-12 15:50:27] 2025-10-12 13:49:57,144 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 15:50:27] 2025-10-12 13:49:57,374 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 15:50:27] 2025-10-12 13:49:57,374 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 15:50:27] 2025-10-12 13:49:57,374 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 15:50:27] 2025-10-12 13:49:57,374 | INFO     | will abort loop
[2025-10-12 15:50:27] 2025-10-12 13:49:57,472 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 15:50:27] 2025-10-12 13:49:57,504 | INFO     | all payload control threads have been joined
[2025-10-12 15:50:27] 2025-10-12 13:49:58,149 | INFO     | [job] retrieve thread has finished
[2025-10-12 15:50:27] 2025-10-12 13:49:58,149 | INFO     | all data control threads have been joined
[2025-10-12 15:50:27] 2025-10-12 13:49:58,235 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 15:50:27] 2025-10-12 13:49:58,368 | INFO     | all job control threads have been joined
[2025-10-12 15:50:27] 2025-10-12 13:49:58,380 | INFO     | [job] job monitor thread has finished
[2025-10-12 15:50:27] 2025-10-12 13:49:58,509 | INFO     | [payload] control thread has finished
[2025-10-12 15:50:27] 2025-10-12 13:49:58,566 | INFO     | [payload] failed_post thread has finished
[2025-10-12 15:50:27] 2025-10-12 13:49:58,789 | INFO     | [data] copytool_in thread has finished
[2025-10-12 15:50:27] 2025-10-12 13:49:59,036 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 15:50:27] 2025-10-12 13:49:59,155 | INFO     | [data] control thread has finished
[2025-10-12 15:50:27] 2025-10-12 13:49:59,374 | INFO     | [job] control thread has finished
[2025-10-12 15:50:27] 2025-10-12 13:49:59,478 | INFO     | [data] copytool_out thread has finished
[2025-10-12 15:50:27] 2025-10-12 13:49:59,544 | INFO     | [job] validate thread has finished
[2025-10-12 15:50:27] 2025-10-12 13:49:59,614 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 15:50:27] 2025-10-12 13:49:59,682 | INFO     | [payload] validate_post thread has finished
[2025-10-12 15:50:27] 2025-10-12 13:50:00,062 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 15:50:27] 2025-10-12 13:50:00,099 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 15:50:27] 2025-10-12 13:50:01,068 | INFO     | [job] queue monitor thread has finished
[2025-10-12 15:50:27] 2025-10-12 13:50:04,107 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 15:50:27] 2025-10-12 13:50:07,560 | INFO     | job.realtimelogging is not enabled
[2025-10-12 15:50:27] 2025-10-12 13:50:08,565 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 15:50:27] 2025-10-12 13:50:15,881 | INFO     | [monitor] cgroup control has ended
[2025-10-12 15:50:27] 2025-10-12 13:50:17,608 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140229909268288)>', '<ExcThread(monitor, started 140229021243136)>']
[2025-10-12 15:50:27] 2025-10-12 13:50:22,634 | INFO     | all workflow threads have been joined
[2025-10-12 15:50:27] 2025-10-12 13:50:22,634 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 15:50:27] 2025-10-12 13:50:22,634 | INFO     | traces error code: 0
[2025-10-12 15:50:27] 2025-10-12 13:50:22,635 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 15:50:27] 2025-10-12 13:50:27,239 | INFO     | PID=3385484 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 15:50:27] 2025-10-12 13:50:27,240 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 15:50:27] 2025-10-12 13:50:27,240 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 15:50:27] 2025-10-12 13:50:27,240 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 15:50:27] 2025-10-12 13:50:27,240 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 15:50:27] 2025-10-12 13:50:27,240 | INFO     | [monitor] control thread has ended
[2025-10-12 15:50:27] 2025-10-12 13:50:27,319 [wrapper] ==== pilot stdout END ====
[2025-10-12 15:50:27] 2025-10-12 13:50:27,323 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 15:50:27] 2025-10-12 13:50:27,327 [wrapper] pilotpid: 3385484
[2025-10-12 15:50:27] 2025-10-12 13:50:27,332 [wrapper] Pilot exit status: 0
[2025-10-12 15:50:27] 2025-10-12 13:50:27,344 [wrapper] pandaids: 6838990524
[2025-10-12 15:50:27] 2025-10-12 13:50:27,368 [wrapper] cleanup supervisor_pilot 3401739 3385485
[2025-10-12 15:50:27] 2025-10-12 13:50:27,372 [wrapper] Test setup, not cleaning
[2025-10-12 15:50:27] 2025-10-12 13:50:27,376 [wrapper] apfmon messages muted
[2025-10-12 15:50:27] 2025-10-12 13:50:27,380 [wrapper] ==== wrapper stdout END ====
[2025-10-12 15:50:27] 2025-10-12 13:50:27,384 [wrapper] ==== wrapper stderr END ====
[2025-10-12 15:50:27]  *** Error codes and diagnostics ***
[2025-10-12 15:50:27]     "exeErrorCode": 0,
[2025-10-12 15:50:27]     "exeErrorDiag": "",
[2025-10-12 15:50:27]     "pilotErrorCode": 0,
[2025-10-12 15:50:27]     "pilotErrorDiag": "",
[2025-10-12 15:50:27]  *** Listing of results directory ***
[2025-10-12 15:50:27] total 413780
[2025-10-12 15:50:27] -rw-r--r-- 1 boinc boinc    557409 Oct 12 00:22 pilot3.tar.gz
[2025-10-12 15:50:27] -rwx------ 1 boinc boinc     36292 Oct 12 00:41 runpilot2-wrapper.sh
[2025-10-12 15:50:27] -rw-r--r-- 1 boinc boinc      5112 Oct 12 00:41 queuedata.json
[2025-10-12 15:50:27] -rw-r--r-- 1 boinc boinc       100 Oct 12 14:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 15:50:27] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 14:36 run_atlas
[2025-10-12 15:50:27] -rw-r--r-- 1 boinc boinc       105 Oct 12 14:36 job.xml
[2025-10-12 15:50:27] -rw-r--r-- 2 boinc boinc 223327780 Oct 12 14:36 EVNT.46676267._002660.pool.root.1
[2025-10-12 15:50:27] -rw-r--r-- 2 boinc boinc    569674 Oct 12 14:36 input.tar.gz
[2025-10-12 15:50:27] -rw-r--r-- 2 boinc boinc     15120 Oct 12 14:36 start_atlas.sh
[2025-10-12 15:50:27] drwxrwx--x 2 boinc boinc      4096 Oct 12 14:36 shared
[2025-10-12 15:50:27] -rw-r--r-- 1 boinc boinc         0 Oct 12 14:36 boinc_setup_complete
[2025-10-12 15:50:27] -rw-r--r-- 1 boinc boinc      6377 Oct 12 14:36 init_data.xml
[2025-10-12 15:50:27] -rw-r--r-- 1 boinc boinc         0 Oct 12 14:36 boinc_lockfile
[2025-10-12 15:50:27] -rw-r--r-- 1 boinc boinc      2549 Oct 12 14:36 pandaJob.out
[2025-10-12 15:50:27] -rw------- 1 boinc boinc    975512 Oct 12 14:36 agis_schedconf.cvmfs.json
[2025-10-12 15:50:27] -rw------- 1 boinc boinc   1560580 Oct 12 14:36 agis_ddmendpoints.agis.ALL.json
[2025-10-12 15:50:27] drwx------ 5 boinc boinc      4096 Oct 12 14:36 pilot3
[2025-10-12 15:50:27] -rw------- 1 boinc boinc 194643415 Oct 12 15:49 HITS.46676269._066177.pool.root.1
[2025-10-12 15:50:27] -rw------- 1 boinc boinc        95 Oct 12 15:49 pilot_heartbeat.json
[2025-10-12 15:50:27] -rw-r--r-- 1 boinc boinc       529 Oct 12 15:49 boinc_task_state.xml
[2025-10-12 15:50:27] -rw------- 1 boinc boinc      1021 Oct 12 15:49 memory_monitor_summary.json
[2025-10-12 15:50:27] -rw------- 1 boinc boinc    267419 Oct 12 15:49 log.46676269._066177.job.log.tgz.1
[2025-10-12 15:50:27] -rw------- 1 boinc boinc      7768 Oct 12 15:49 heartbeat.json
[2025-10-12 15:50:27] -rw-r--r-- 1 boinc boinc        27 Oct 12 15:50 wrapper_checkpoint.txt
[2025-10-12 15:50:27] -rw-r--r-- 1 boinc boinc      8192 Oct 12 15:50 boinc_mmap_file
[2025-10-12 15:50:27] -rw------- 1 boinc boinc       747 Oct 12 15:50 pilotlog.txt
[2025-10-12 15:50:27] -rw------- 1 boinc boinc    656033 Oct 12 15:50 log.46676269._066177.job.log.1
[2025-10-12 15:50:27] -rw------- 1 boinc boinc       357 Oct 12 15:50 output.list
[2025-10-12 15:50:27] -rw-r--r-- 1 boinc boinc       620 Oct 12 15:50 runtime_log
[2025-10-12 15:50:27] -rw------- 1 boinc boinc    942080 Oct 12 15:50 result.tar.gz
[2025-10-12 15:50:27] -rw-r--r-- 1 boinc boinc      8777 Oct 12 15:50 runtime_log.err
[2025-10-12 15:50:27] -rw------- 1 boinc boinc       658 Oct 12 15:50 plQMDmvSxR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmmiSMDmnn0dmn.diag
[2025-10-12 15:50:27] -rw-r--r-- 1 boinc boinc      9551 Oct 12 15:50 stderr.txt
[2025-10-12 15:50:27] HITS file was successfully produced:
[2025-10-12 15:50:27] -rw------- 1 boinc boinc 194643415 Oct 12 15:49 shared/HITS.pool.root.1
[2025-10-12 15:50:27]  *** Contents of shared directory: ***
[2025-10-12 15:50:27] total 409684
[2025-10-12 15:50:27] -rw-r--r-- 2 boinc boinc 223327780 Oct 12 14:36 ATLAS.root_0
[2025-10-12 15:50:27] -rw-r--r-- 2 boinc boinc    569674 Oct 12 14:36 input.tar.gz
[2025-10-12 15:50:27] -rw-r--r-- 2 boinc boinc     15120 Oct 12 14:36 start_atlas.sh
[2025-10-12 15:50:27] -rw------- 1 boinc boinc 194643415 Oct 12 15:49 HITS.pool.root.1
[2025-10-12 15:50:27] -rw------- 1 boinc boinc    942080 Oct 12 15:50 result.tar.gz
15:50:28 (3381698): run_atlas exited; CPU time 16635.551654
15:50:28 (3381698): called boinc_finish(0)

</stderr_txt>
]]>

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