Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:40:04 (2964976): wrapper (7.7.26015): starting
12:40:04 (2964976): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 12:40:04] Arguments: --nthreads 8
[2025-10-12 12:40:04] Threads: 8
[2025-10-12 12:40:04] Checking for CVMFS
[2025-10-12 12:40:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 12:40:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 12:40:04] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 12:40:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 12:40:04] 2.13.2.0 1338992 4322 57976 151617 0 57 3112368 4097024 0 130560 0 4462895 99.993 148107 26748 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-10-12 12:40:04] CVMFS is ok
[2025-10-12 12:40:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 12:40:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 12:40:04] Further information can be found at the LHC@home message board.
[2025-10-12 12:40:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 12:40:04] Checking for apptainer binary...
[2025-10-12 12:40:04] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-10-12 12:40:04] apptainer is not installed, using version from CVMFS
[2025-10-12 12:40:04] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 12:40:04] pckeatlas02
[2025-10-12 12:40:04] apptainer works
[2025-10-12 12:40:04] Set ATHENA_PROC_NUMBER=8
[2025-10-12 12:40:04] Set ATHENA_CORE_NUMBER=8
[2025-10-12 12:40:04] Starting ATLAS job with PandaID=6838850756
[2025-10-12 12:40:04] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/19 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 13:59:31]  *** The last 200 lines of the pilot log: ***
[2025-10-12 13:59:31]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-12 13:59:31]  replicas=None
[2025-10-12 13:59:31]  scope=mc23_13p6TeV
[2025-10-12 13:59:31]  status=None
[2025-10-12 13:59:31]  status_code=0
[2025-10-12 13:59:31]  storage_token=
[2025-10-12 13:59:31]  surl=/var/lib/boinc/slots/19/PanDA_Pilot-6838850756/log.46676269._063432.job.log.tgz.1
[2025-10-12 13:59:31]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ac/5a/log.46676269._063432.job.log.tgz.1
[2025-10-12 13:59:31]  workdir=None
[2025-10-12 13:59:31] ]
[2025-10-12 13:59:31] 2025-10-12 11:58:53,970 | INFO     | transferring file log.46676269._063432.job.log.tgz.1 from /var/lib/boinc/slots/19/PanDA_Pilot-6838850756/log.46676269._063432.job.log.tgz.1 to /var/lib/boinc/slots
[2025-10-12 13:59:31] 2025-10-12 11:58:53,970 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/19/PanDA_Pilot-6838850756/log.46676269._063432.job.log.tgz.1 /var/lib/boinc/slots/19/log.46676269._063432.j
[2025-10-12 13:59:31] 2025-10-12 11:58:53,977 | INFO     | adding to output.list: log.46676269._063432.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ac/5a/log.46676269._063432.job.log.tg
[2025-10-12 13:59:31] 2025-10-12 11:58:53,977 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 13:59:31] 2025-10-12 11:58:53,977 | INFO     | summary of transferred files:
[2025-10-12 13:59:31] 2025-10-12 11:58:53,977 | INFO     |  -- lfn=log.46676269._063432.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 13:59:31] 2025-10-12 11:58:53,977 | INFO     | stage-out finished correctly
[2025-10-12 13:59:31] 2025-10-12 11:58:54,014 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 13:59:31] 2025-10-12 11:58:54,014 | INFO     | time since job start (4726s) is within the limit (172800.0s)
[2025-10-12 13:59:31] 2025-10-12 11:58:55,242 | WARNING  | process 2976016 can no longer be monitored (due to stat problems) - aborting
[2025-10-12 13:59:31] 2025-10-12 11:58:55,242 | INFO     | using path: /var/lib/boinc/slots/19/PanDA_Pilot-6838850756/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 13:59:31] 2025-10-12 11:58:55,271 | INFO     | number of running child processes to parent process 2976016: 1
[2025-10-12 13:59:31] 2025-10-12 11:58:55,271 | INFO     | maximum number of monitored processes: 6
[2025-10-12 13:59:31] 2025-10-12 11:58:56,030 | INFO     | time since job start (4728s) is within the limit (172800.0s)
[2025-10-12 13:59:31] 2025-10-12 11:58:56,713 | INFO     | job 6838850756 has state=finished
[2025-10-12 13:59:31] 2025-10-12 11:58:56,713 | INFO     | preparing for final server update for job 6838850756 in state='finished'
[2025-10-12 13:59:31] 2025-10-12 11:58:56,713 | INFO     | this job has now completed (state=finished)
[2025-10-12 13:59:31] 2025-10-12 11:58:56,714 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 13:59:31] 2025-10-12 11:58:56,714 | INFO     | log transfer has been attempted: DONE
[2025-10-12 13:59:31] 2025-10-12 11:58:56,714 | INFO     | job 6838850756 has finished - writing final server update
[2025-10-12 13:59:31] 2025-10-12 11:58:56,714 | INFO     | total number of processed events: 400 (read)
[2025-10-12 13:59:31] 2025-10-12 11:58:56,714 | INFO     | executing command: lscpu
[2025-10-12 13:59:31] 2025-10-12 11:58:56,722 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 13:59:31] 2025-10-12 11:58:57,773 | INFO     | monitor loop #360: job 0:6838850756 is in state 'finished'
[2025-10-12 13:59:31] 2025-10-12 11:58:57,774 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 13:59:31] 2025-10-12 11:58:58,035 | INFO     | time since job start (4730s) is within the limit (172800.0s)
[2025-10-12 13:59:31] 2025-10-12 11:58:59,325 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 13:59:31] 2025-10-12 11:58:59,326 | INFO     | found 4 cores (4 cores per socket, 1 socket) HT, CPU MHz: 3839.9579999999996
[2025-10-12 13:59:31] 2025-10-12 11:58:59,327 | INFO     | using path: /var/lib/boinc/slots/19/PanDA_Pilot-6838850756/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 13:59:31] 2025-10-12 11:58:59,327 | INFO     | extracted standard info from prmon json
[2025-10-12 13:59:31] 2025-10-12 11:58:59,327 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 13:59:31] 2025-10-12 11:58:59,327 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 13:59:31] 2025-10-12 11:58:59,327 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 13:59:31] 2025-10-12 11:58:59,327 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 13:59:31] 2025-10-12 11:58:59,328 | INFO     | fitting pss+swap vs Time
[2025-10-12 13:59:31] 2025-10-12 11:58:59,328 | INFO     | sum of square deviations: 110960220.0
[2025-10-12 13:59:31] 2025-10-12 11:58:59,328 | INFO     | sum of deviations: -12568341668.000002
[2025-10-12 13:59:31] 2025-10-12 11:58:59,328 | INFO     | mean x: 1760268067.0
[2025-10-12 13:59:31] 2025-10-12 11:58:59,329 | INFO     | mean y: 2701798.6901408453
[2025-10-12 13:59:31] 2025-10-12 11:58:59,329 | INFO     | -- intersect: 199386323184.1373
[2025-10-12 13:59:31] 2025-10-12 11:58:59,329 | INFO     | intersect: 199386323184.1373
[2025-10-12 13:59:31] 2025-10-12 11:58:59,329 | INFO     | chi2: 0.12541719298498838
[2025-10-12 13:59:31] 2025-10-12 11:58:59,329 | INFO     | -- intersect: 199386323184.1373
[2025-10-12 13:59:31] 2025-10-12 11:58:59,329 | INFO     | current memory leak: -113.27 B/s (using 71 data points, chi2=0.13)
[2025-10-12 13:59:31] 2025-10-12 11:58:59,329 | INFO     | could have reported an average CPU frequency of 3756 MHz (6 samples)
[2025-10-12 13:59:31] 2025-10-12 11:58:59,329 | INFO     | ..............................
[2025-10-12 13:59:31] 2025-10-12 11:58:59,329 | INFO     | . Timing measurements:
[2025-10-12 13:59:31] 2025-10-12 11:58:59,329 | INFO     | . get job = 0 s
[2025-10-12 13:59:31] 2025-10-12 11:58:59,329 | INFO     | . initial setup = 0 s
[2025-10-12 13:59:31] 2025-10-12 11:58:59,329 | INFO     | . payload setup = 3 s
[2025-10-12 13:59:31] 2025-10-12 11:58:59,329 | INFO     | . stage-in = 0 s
[2025-10-12 13:59:31] 2025-10-12 11:58:59,329 | INFO     | . payload execution = 4706 s
[2025-10-12 13:59:31] 2025-10-12 11:58:59,329 | INFO     | . stage-out = 0 s
[2025-10-12 13:59:31] 2025-10-12 11:58:59,329 | INFO     | . log creation = 0 s
[2025-10-12 13:59:31] 2025-10-12 11:58:59,329 | INFO     | ..............................
[2025-10-12 13:59:31] 2025-10-12 11:58:59,366 | INFO     | 
[2025-10-12 13:59:31] 2025-10-12 11:58:59,366 | INFO     | job summary report
[2025-10-12 13:59:31] 2025-10-12 11:58:59,366 | INFO     | --------------------------------------------------
[2025-10-12 13:59:31] 2025-10-12 11:58:59,366 | INFO     | PanDA job id: 6838850756
[2025-10-12 13:59:31] 2025-10-12 11:58:59,366 | INFO     | task id: 46676269
[2025-10-12 13:59:31] 2025-10-12 11:58:59,366 | INFO     | errors: (none)
[2025-10-12 13:59:31] 2025-10-12 11:58:59,366 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 13:59:31] 2025-10-12 11:58:59,366 | INFO     | pilot state: finished 
[2025-10-12 13:59:31] 2025-10-12 11:58:59,366 | INFO     | transexitcode: 0
[2025-10-12 13:59:31] 2025-10-12 11:58:59,366 | INFO     | exeerrorcode: 0
[2025-10-12 13:59:31] 2025-10-12 11:58:59,366 | INFO     | exeerrordiag: 
[2025-10-12 13:59:31] 2025-10-12 11:58:59,366 | INFO     | exitcode: 0
[2025-10-12 13:59:31] 2025-10-12 11:58:59,366 | INFO     | exitmsg: OK
[2025-10-12 13:59:31] 2025-10-12 11:58:59,366 | INFO     | cpuconsumptiontime: 35340 s
[2025-10-12 13:59:31] 2025-10-12 11:58:59,366 | INFO     | nevents: 400
[2025-10-12 13:59:31] 2025-10-12 11:58:59,366 | INFO     | neventsw: 0
[2025-10-12 13:59:31] 2025-10-12 11:58:59,366 | INFO     | pid: 2976016
[2025-10-12 13:59:31] 2025-10-12 11:58:59,366 | INFO     | pgrp: 2976016
[2025-10-12 13:59:31] 2025-10-12 11:58:59,366 | INFO     | corecount: 8
[2025-10-12 13:59:31] 2025-10-12 11:58:59,366 | INFO     | event service: False
[2025-10-12 13:59:31] 2025-10-12 11:58:59,367 | INFO     | sizes: {0: 2348805, 2: 2349067, 11: 2349095, 4713: 2384380, 4719: 2384518}
[2025-10-12 13:59:31] 2025-10-12 11:58:59,367 | INFO     | --------------------------------------------------
[2025-10-12 13:59:31] 2025-10-12 11:58:59,367 | INFO     | 
[2025-10-12 13:59:31] 2025-10-12 11:58:59,367 | INFO     | executing command: ls -lF /var/lib/boinc/slots/19
[2025-10-12 13:59:31] 2025-10-12 11:58:59,374 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 13:59:31] 2025-10-12 11:58:59,375 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 13:59:31] 2025-10-12 11:58:59,375 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 13:59:31] 2025-10-12 11:58:59,375 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 13:59:31] 2025-10-12 11:58:59,375 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 13:59:31] 2025-10-12 11:58:59,375 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 13:59:31] 2025-10-12 11:58:59,375 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 13:59:31] 2025-10-12 11:58:59,375 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 13:59:31] 2025-10-12 11:58:59,375 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 13:59:31] 2025-10-12 11:58:59,375 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 13:59:31] 2025-10-12 11:58:59,375 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 13:59:31] 2025-10-12 11:58:59,375 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 13:59:31] 2025-10-12 11:58:59,375 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 13:59:31] 2025-10-12 11:58:59,375 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 13:59:31] 2025-10-12 11:58:59,375 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 13:59:31] 2025-10-12 11:58:59,375 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 13:59:31] 2025-10-12 11:58:59,375 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 13:59:31] 2025-10-12 11:58:59,375 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 13:59:31] 2025-10-12 11:58:59,375 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 13:59:31] 2025-10-12 11:58:59,375 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 13:59:31] 2025-10-12 11:58:59,375 | INFO     | job 6838850756 has completed (purged errors)
[2025-10-12 13:59:31] 2025-10-12 11:58:59,375 | INFO     | overall cleanup function is called
[2025-10-12 13:59:31] 2025-10-12 11:59:00,381 | INFO     | --- collectZombieJob: --- 10, [2976016]
[2025-10-12 13:59:31] 2025-10-12 11:59:00,382 | INFO     | zombie collector waiting for pid 2976016
[2025-10-12 13:59:31] 2025-10-12 11:59:00,382 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 13:59:31] 2025-10-12 11:59:00,382 | INFO     | collected zombie processes
[2025-10-12 13:59:31] 2025-10-12 11:59:00,382 | INFO     | will attempt to kill all subprocesses of pid=2976016
[2025-10-12 13:59:31] 2025-10-12 11:59:00,413 | INFO     | process IDs to be killed: [2976016] (in reverse order)
[2025-10-12 13:59:31] 2025-10-12 11:59:00,429 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 13:59:31] 2025-10-12 11:59:00,429 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 13:59:31] 2025-10-12 11:59:00,430 | INFO     | did not find any defunct processes belonging to 2976016
[2025-10-12 13:59:31] 2025-10-12 11:59:00,431 | INFO     | did not find any defunct processes belonging to 2976016
[2025-10-12 13:59:31] 2025-10-12 11:59:00,431 | INFO     | ready for new job
[2025-10-12 13:59:31] 2025-10-12 11:59:00,431 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 13:59:31] 2025-10-12 11:59:00,432 | INFO     | ***************************************
[2025-10-12 13:59:31] 2025-10-12 11:59:00,432 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 13:59:31] 2025-10-12 11:59:00,432 | INFO     | ***************************************
[2025-10-12 13:59:31] 2025-10-12 11:59:00,432 | INFO     | 
[2025-10-12 13:59:31] 2025-10-12 11:59:00,432 | INFO     | architecture information:
[2025-10-12 13:59:31] 2025-10-12 11:59:00,432 | INFO     | executing command: cat /etc/os-release
[2025-10-12 13:59:31] 2025-10-12 11:59:00,437 | INFO     | cat /etc/os-release:
[2025-10-12 13:59:31] NAME="CentOS Linux"
[2025-10-12 13:59:31] VERSION="7 (Core)"
[2025-10-12 13:59:31] ID="centos"
[2025-10-12 13:59:31] ID_LIKE="rhel fedora"
[2025-10-12 13:59:31] VERSION_ID="7"
[2025-10-12 13:59:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 13:59:31] ANSI_COLOR="0;31"
[2025-10-12 13:59:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 13:59:31] HOME_URL="https://www.centos.org/"
[2025-10-12 13:59:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 13:59:31] 
[2025-10-12 13:59:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 13:59:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 13:59:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 13:59:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 13:59:31] 
[2025-10-12 13:59:31] 2025-10-12 11:59:00,438 | INFO     | ***************************************
[2025-10-12 13:59:31] 2025-10-12 11:59:00,940 | INFO     | executing command: df -mP /var/lib/boinc/slots/19
[2025-10-12 13:59:31] 2025-10-12 11:59:00,947 | INFO     | sufficient remaining disk space (118343335936 B)
[2025-10-12 13:59:31] 2025-10-12 11:59:00,947 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 13:59:31] 2025-10-12 11:59:00,947 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 13:59:31] 2025-10-12 11:59:00,947 | INFO     | update_server=False
[2025-10-12 13:59:31] 2025-10-12 11:59:00,947 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 13:59:31] 2025-10-12 11:59:00,947 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 13:59:31] 2025-10-12 11:59:00,947 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 13:59:31] 2025-10-12 11:59:01,281 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 13:59:31] 2025-10-12 11:59:01,281 | INFO     | aborting loop
[2025-10-12 13:59:31] 2025-10-12 11:59:01,470 | INFO     | all data control threads have been joined
[2025-10-12 13:59:31] 2025-10-12 11:59:01,498 | INFO     | all job control threads have been joined
[2025-10-12 13:59:31] 2025-10-12 11:59:01,951 | INFO     | [job] retrieve thread has finished
[2025-10-12 13:59:31] 2025-10-12 11:59:01,953 | INFO     | [job] queue monitor thread has finished
[2025-10-12 13:59:31] 2025-10-12 11:59:02,024 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 13:59:31] 2025-10-12 11:59:02,102 | INFO     | all payload control threads have been joined
[2025-10-12 13:59:31] 2025-10-12 11:59:02,129 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 13:59:31] 2025-10-12 11:59:02,287 | INFO     | [job] job monitor thread has finished
[2025-10-12 13:59:31] 2025-10-12 11:59:02,475 | INFO     | [data] control thread has finished
[2025-10-12 13:59:31] 2025-10-12 11:59:02,503 | INFO     | [job] control thread has finished
[2025-10-12 13:59:31] 2025-10-12 11:59:02,628 | INFO     | [job] validate thread has finished
[2025-10-12 13:59:31] 2025-10-12 11:59:02,665 | INFO     | [payload] validate_post thread has finished
[2025-10-12 13:59:31] 2025-10-12 11:59:02,687 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 13:59:31] 2025-10-12 11:59:02,739 | INFO     | [payload] failed_post thread has finished
[2025-10-12 13:59:31] 2025-10-12 11:59:02,742 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 13:59:31] 2025-10-12 11:59:03,107 | INFO     | [payload] control thread has finished
[2025-10-12 13:59:31] 2025-10-12 11:59:03,192 | INFO     | [data] copytool_in thread has finished
[2025-10-12 13:59:31] 2025-10-12 11:59:04,030 | INFO     | [data] copytool_out thread has finished
[2025-10-12 13:59:31] 2025-10-12 11:59:04,953 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 13:59:31] 2025-10-12 11:59:11,874 | INFO     | job.realtimelogging is not enabled
[2025-10-12 13:59:31] 2025-10-12 11:59:12,880 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 13:59:31] 2025-10-12 11:59:15,633 | INFO     | [monitor] cgroup control has ended
[2025-10-12 13:59:31] 2025-10-12 11:59:16,768 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139935444096832)>', '<ExcThread(monitor, started 139934891484928)>']
[2025-10-12 13:59:31] 2025-10-12 11:59:21,794 | INFO     | all workflow threads have been joined
[2025-10-12 13:59:31] 2025-10-12 11:59:21,794 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 13:59:31] 2025-10-12 11:59:21,794 | INFO     | traces error code: 0
[2025-10-12 13:59:31] 2025-10-12 11:59:21,794 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 13:59:31] 2025-10-12 11:59:31,165 | INFO     | PID=2968716 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 13:59:31] 2025-10-12 11:59:31,166 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 13:59:31] 2025-10-12 11:59:31,166 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 13:59:31] 2025-10-12 11:59:31,166 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 13:59:31] 2025-10-12 11:59:31,166 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 13:59:31] 2025-10-12 11:59:31,166 | INFO     | [monitor] control thread has ended
[2025-10-12 13:59:31] 2025-10-12 11:59:31,230 [wrapper] ==== pilot stdout END ====
[2025-10-12 13:59:31] 2025-10-12 11:59:31,232 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 13:59:31] 2025-10-12 11:59:31,233 [wrapper] pilotpid: 2968716
[2025-10-12 13:59:31] 2025-10-12 11:59:31,234 [wrapper] Pilot exit status: 0
[2025-10-12 13:59:31] 2025-10-12 11:59:31,238 [wrapper] pandaids: 6838850756
[2025-10-12 13:59:31] 2025-10-12 11:59:31,247 [wrapper] cleanup supervisor_pilot 2992365 2968717
[2025-10-12 13:59:31] 2025-10-12 11:59:31,248 [wrapper] Test setup, not cleaning
[2025-10-12 13:59:31] 2025-10-12 11:59:31,249 [wrapper] apfmon messages muted
[2025-10-12 13:59:31] 2025-10-12 11:59:31,250 [wrapper] ==== wrapper stdout END ====
[2025-10-12 13:59:31] 2025-10-12 11:59:31,251 [wrapper] ==== wrapper stderr END ====
[2025-10-12 13:59:31]  *** Error codes and diagnostics ***
[2025-10-12 13:59:31]     "exeErrorCode": 0,
[2025-10-12 13:59:31]     "exeErrorDiag": "",
[2025-10-12 13:59:31]     "pilotErrorCode": 0,
[2025-10-12 13:59:31]     "pilotErrorDiag": "",
[2025-10-12 13:59:31]  *** Listing of results directory ***
[2025-10-12 13:59:31] total 414424
[2025-10-12 13:59:31] -rw-r--r--. 1 boinc boinc    557409 Oct 11 21:02 pilot3.tar.gz
[2025-10-12 13:59:31] -rw-r--r--. 1 boinc boinc      5112 Oct 11 21:27 queuedata.json
[2025-10-12 13:59:31] -rwx------. 1 boinc boinc     36292 Oct 11 21:27 runpilot2-wrapper.sh
[2025-10-12 13:59:31] -rw-r--r--. 1 boinc boinc       100 Oct 12 12:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 13:59:31] -rwxr-xr-x. 1 boinc boinc      7986 Oct 12 12:40 run_atlas
[2025-10-12 13:59:31] -rw-r--r--. 1 boinc boinc       105 Oct 12 12:40 job.xml
[2025-10-12 13:59:31] -rw-r--r--. 1 boinc boinc      6275 Oct 12 12:40 init_data.xml
[2025-10-12 13:59:31] -rw-r--r--. 2 boinc boinc 223938670 Oct 12 12:40 EVNT.46676267._002549.pool.root.1
[2025-10-12 13:59:31] -rw-r--r--. 2 boinc boinc     15120 Oct 12 12:40 start_atlas.sh
[2025-10-12 13:59:31] drwxrwx--x. 2 boinc boinc        68 Oct 12 12:40 shared
[2025-10-12 13:59:31] -rw-r--r--. 2 boinc boinc    569678 Oct 12 12:40 input.tar.gz
[2025-10-12 13:59:31] -rw-r--r--. 1 boinc boinc         0 Oct 12 12:40 boinc_lockfile
[2025-10-12 13:59:31] -rw-r--r--. 1 boinc boinc      2548 Oct 12 12:40 pandaJob.out
[2025-10-12 13:59:31] -rw-------. 1 boinc boinc    975520 Oct 12 12:40 agis_schedconf.cvmfs.json
[2025-10-12 13:59:31] -rw-------. 1 boinc boinc   1560580 Oct 12 12:40 agis_ddmendpoints.agis.ALL.json
[2025-10-12 13:59:31] drwx------. 5 boinc boinc      4096 Oct 12 12:40 pilot3
[2025-10-12 13:59:31] -rw-------. 1 boinc boinc 194532073 Oct 12 13:58 HITS.46676269._063432.pool.root.1
[2025-10-12 13:59:31] -rw-------. 1 boinc boinc        95 Oct 12 13:58 pilot_heartbeat.json
[2025-10-12 13:59:31] -rw-r--r--. 1 boinc boinc       529 Oct 12 13:58 boinc_task_state.xml
[2025-10-12 13:59:31] -rw-------. 1 boinc boinc      1014 Oct 12 13:58 memory_monitor_summary.json
[2025-10-12 13:59:31] -rw-------. 1 boinc boinc    311724 Oct 12 13:58 log.46676269._063432.job.log.tgz.1
[2025-10-12 13:59:31] -rw-------. 1 boinc boinc      7773 Oct 12 13:58 heartbeat.json
[2025-10-12 13:59:31] -rw-r--r--. 1 boinc boinc      8192 Oct 12 13:59 boinc_mmap_file
[2025-10-12 13:59:31] -rw-r--r--. 1 boinc boinc        27 Oct 12 13:59 wrapper_checkpoint.txt
[2025-10-12 13:59:31] -rw-------. 1 boinc boinc       747 Oct 12 13:59 pilotlog.txt
[2025-10-12 13:59:31] -rw-------. 1 boinc boinc    695087 Oct 12 13:59 log.46676269._063432.job.log.1
[2025-10-12 13:59:31] -rw-------. 1 boinc boinc       357 Oct 12 13:59 output.list
[2025-10-12 13:59:31] -rw-r--r--. 1 boinc boinc       620 Oct 12 13:59 runtime_log
[2025-10-12 13:59:31] -rw-------. 1 boinc boinc   1024000 Oct 12 13:59 result.tar.gz
[2025-10-12 13:59:31] -rw-r--r--. 1 boinc boinc      8730 Oct 12 13:59 runtime_log.err
[2025-10-12 13:59:31] -rw-------. 1 boinc boinc       650 Oct 12 13:59 8BaMDm7QuR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmBNhNDmtryfpm.diag
[2025-10-12 13:59:31] -rw-r--r--. 1 boinc boinc     21947 Oct 12 13:59 stderr.txt
[2025-10-12 13:59:31] HITS file was successfully produced:
[2025-10-12 13:59:31] -rw-------. 1 boinc boinc 194532073 Oct 12 13:58 shared/HITS.pool.root.1
[2025-10-12 13:59:31]  *** Contents of shared directory: ***
[2025-10-12 13:59:31] total 410244
[2025-10-12 13:59:31] -rw-r--r--. 2 boinc boinc 223938670 Oct 12 12:40 ATLAS.root_0
[2025-10-12 13:59:31] -rw-r--r--. 2 boinc boinc     15120 Oct 12 12:40 start_atlas.sh
[2025-10-12 13:59:31] -rw-r--r--. 2 boinc boinc    569678 Oct 12 12:40 input.tar.gz
[2025-10-12 13:59:31] -rw-------. 1 boinc boinc 194532073 Oct 12 13:58 HITS.pool.root.1
[2025-10-12 13:59:31] -rw-------. 1 boinc boinc   1024000 Oct 12 13:59 result.tar.gz
13:59:32 (2964976): run_atlas exited; CPU time 35377.750630
13:59:32 (2964976): called boinc_finish(0)

</stderr_txt>
]]>

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