Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
23:48:07 (27945): wrapper (7.7.26015): starting
23:48:07 (27945): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 23:48:07] Arguments: --nthreads 8
[2025-10-11 23:48:07] Threads: 8
[2025-10-11 23:48:07] Checking for CVMFS
[2025-10-11 23:48:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 23:48:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 23:48:08] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 23:48:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 23:48:08] 2.11.2.0 2698 7982 79088 151606 3 56 12197209 20275200 1 130560 0 4827904 99.989 265658 35754 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 23:48:08] CVMFS is ok
[2025-10-11 23:48:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 23:48:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 23:48:08] Further information can be found at the LHC@home message board.
[2025-10-11 23:48:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 23:48:08] Checking for apptainer binary...
[2025-10-11 23:48:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 23:48:08] Running /usr/bin/apptainer --version
[2025-10-11 23:48:08] apptainer version 1.3.2-1.el7
[2025-10-11 23:48:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 23:48:09] c-204-2.aglt2.org
[2025-10-11 23:48:09] apptainer works
[2025-10-11 23:48:09] Set ATHENA_PROC_NUMBER=8
[2025-10-11 23:48:09] Set ATHENA_CORE_NUMBER=8
[2025-10-11 23:48:09] Starting ATLAS job with PandaID=6838990337
[2025-10-11 23:48:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 01:48:43]  *** The last 200 lines of the pilot log: ***
[2025-10-12 01:48:43] 2025-10-12 05:47:38,684 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 01:48:43] 2025-10-12 05:47:38,684 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 01:48:43] 2025-10-12 05:47:38,686 | INFO     | fitting pss+swap vs Time
[2025-10-12 01:48:43] 2025-10-12 05:47:38,687 | INFO     | sum of square deviations: 496597218.0
[2025-10-12 01:48:43] 2025-10-12 05:47:38,688 | INFO     | sum of deviations: 8463103827.0
[2025-10-12 01:48:43] 2025-10-12 05:47:38,688 | INFO     | mean x: 1760244476.0
[2025-10-12 01:48:43] 2025-10-12 05:47:38,688 | INFO     | mean y: 2507945.7863247865
[2025-10-12 01:48:43] 2025-10-12 05:47:38,688 | INFO     | -- intersect: -29995911741.879364
[2025-10-12 01:48:43] 2025-10-12 05:47:38,688 | INFO     | intersect: -29995911741.879364
[2025-10-12 01:48:43] 2025-10-12 05:47:38,688 | INFO     | chi2: 1.5026260745688869
[2025-10-12 01:48:43] 2025-10-12 05:47:38,689 | INFO     | sum of square deviations: 435610028.0
[2025-10-12 01:48:43] 2025-10-12 05:47:38,689 | INFO     | sum of deviations: 8027132221.499999
[2025-10-12 01:48:43] 2025-10-12 05:47:38,689 | INFO     | mean x: 1760244323.5
[2025-10-12 01:48:43] 2025-10-12 05:47:38,690 | INFO     | mean y: 2506858.1160714286
[2025-10-12 01:48:43] 2025-10-12 05:47:38,690 | INFO     | -- intersect: -32434106210.11963
[2025-10-12 01:48:43] 2025-10-12 05:47:38,690 | INFO     | intersect: -32434106210.11963
[2025-10-12 01:48:43] 2025-10-12 05:47:38,690 | INFO     | chi2: 1.5050955428270232
[2025-10-12 01:48:43] 2025-10-12 05:47:38,690 | INFO     | current chi2=1.5050955428270232 (change=-0.1643434983546939 %)
[2025-10-12 01:48:43] 2025-10-12 05:47:38,691 | INFO     | right removable region: 111
[2025-10-12 01:48:43] 2025-10-12 05:47:38,691 | INFO     | sum of square deviations: 435610028.0
[2025-10-12 01:48:43] 2025-10-12 05:47:38,691 | INFO     | sum of deviations: -8376646025.999999
[2025-10-12 01:48:43] 2025-10-12 05:47:38,691 | INFO     | mean x: 1760244628.5
[2025-10-12 01:48:43] 2025-10-12 05:47:38,692 | INFO     | mean y: 2549189.160714286
[2025-10-12 01:48:43] 2025-10-12 05:47:38,692 | INFO     | -- intersect: 33851508635.320133
[2025-10-12 01:48:43] 2025-10-12 05:47:38,692 | INFO     | intersect: 33851508635.320133
[2025-10-12 01:48:43] 2025-10-12 05:47:38,692 | INFO     | chi2: 0.09337302261519756
[2025-10-12 01:48:43] 2025-10-12 05:47:38,692 | INFO     | current chi2=0.09337302261519756 (change=93.7860107583993 %)
[2025-10-12 01:48:43] 2025-10-12 05:47:38,693 | INFO     | sum of square deviations: 379832238.0
[2025-10-12 01:48:43] 2025-10-12 05:47:38,693 | INFO     | sum of deviations: -6209515922.999999
[2025-10-12 01:48:43] 2025-10-12 05:47:38,693 | INFO     | mean x: 1760244781.0
[2025-10-12 01:48:43] 2025-10-12 05:47:38,694 | INFO     | sufficient remaining disk space (18589155328 B)
[2025-10-12 01:48:43] 2025-10-12 05:47:38,694 | INFO     | mean y: 2543140.728971963
[2025-10-12 01:48:43] 2025-10-12 05:47:38,694 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-10-12 01:48:43] 2025-10-12 05:47:38,694 | INFO     | -- intersect: 28779110536.772762
[2025-10-12 01:48:43] 2025-10-12 05:47:38,695 | INFO     | intersect: 28779110536.772762
[2025-10-12 01:48:43] 2025-10-12 05:47:38,695 | INFO     | chi2: 0.07861953358436735
[2025-10-12 01:48:43] 2025-10-12 05:47:38,695 | INFO     | current chi2=0.07861953358436735 (change=15.8005905963131 %)
[2025-10-12 01:48:43] 2025-10-12 05:47:38,695 | INFO     | left removable region: 20
[2025-10-12 01:48:43] 2025-10-12 05:47:38,696 | INFO     | sum of square deviations: 233641590.0
[2025-10-12 01:48:43] 2025-10-12 05:47:38,696 | INFO     | sum of deviations: 922719001.0000001
[2025-10-12 01:48:43] 2025-10-12 05:47:38,696 | INFO     | mean x: 1760244903.0
[2025-10-12 01:48:43] 2025-10-12 05:47:38,697 | INFO     | mean y: 2519492.813186813
[2025-10-12 01:48:43] 2025-10-12 05:47:38,697 | INFO     | -- intersect: -6949202665.94931
[2025-10-12 01:48:43] 2025-10-12 05:47:38,697 | INFO     | intersect: -6949202665.94931
[2025-10-12 01:48:43] 2025-10-12 05:47:38,697 | INFO     | chi2: 0.00014237973854923768
[2025-10-12 01:48:43] 2025-10-12 05:47:38,697 | INFO     | -- intersect: -6949202665.94931
[2025-10-12 01:48:43] 2025-10-12 05:47:38,698 | INFO     | current memory leak: 3.95 B/s (using 91 data points, chi2=0.00)
[2025-10-12 01:48:43] 2025-10-12 05:47:38,698 | INFO     | could have reported an average CPU frequency of 1952 MHz (7 samples)
[2025-10-12 01:48:43] 2025-10-12 05:47:38,698 | INFO     | ..............................
[2025-10-12 01:48:43] 2025-10-12 05:47:38,699 | INFO     | . Timing measurements:
[2025-10-12 01:48:43] 2025-10-12 05:47:38,699 | INFO     | . get job = 0 s
[2025-10-12 01:48:43] 2025-10-12 05:47:38,699 | INFO     | . initial setup = 2 s
[2025-10-12 01:48:43] 2025-10-12 05:47:38,699 | INFO     | . payload setup = 8 s
[2025-10-12 01:48:43] 2025-10-12 05:47:38,699 | INFO     | . stage-in = 0 s
[2025-10-12 01:48:43] 2025-10-12 05:47:38,699 | INFO     | . payload execution = 7113 s
[2025-10-12 01:48:43] 2025-10-12 05:47:38,700 | INFO     | . stage-out = 0 s
[2025-10-12 01:48:43] 2025-10-12 05:47:38,700 | INFO     | . log creation = 0 s
[2025-10-12 01:48:43] 2025-10-12 05:47:38,700 | INFO     | ..............................
[2025-10-12 01:48:43] 2025-10-12 05:47:38,701 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6838990337: 3375264 B (within 2537553920 B limit)
[2025-10-12 01:48:43] 2025-10-12 05:47:38,711 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6838990337/HITS.46676269._065990.pool.root.1 does not exist (skip from workdir size calculation)
[2025-10-12 01:48:43] 2025-10-12 05:47:38,722 | INFO     | total size of present files: 0 B (workdir size: 3375264 B)
[2025-10-12 01:48:43] 2025-10-12 05:47:38,727 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6838990337/HITS.46676269._065990.pool.root.1 since it does not exist
[2025-10-12 01:48:43] 2025-10-12 05:47:38,806 | INFO     | 
[2025-10-12 01:48:43] 2025-10-12 05:47:38,806 | INFO     | job summary report
[2025-10-12 01:48:43] 2025-10-12 05:47:38,807 | INFO     | --------------------------------------------------
[2025-10-12 01:48:43] 2025-10-12 05:47:38,807 | INFO     | PanDA job id: 6838990337
[2025-10-12 01:48:43] 2025-10-12 05:47:38,807 | INFO     | task id: 46676269
[2025-10-12 01:48:43] 2025-10-12 05:47:38,807 | INFO     | errors: (none)
[2025-10-12 01:48:43] 2025-10-12 05:47:38,807 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 01:48:43] 2025-10-12 05:47:38,807 | INFO     | pilot state: finished 
[2025-10-12 01:48:43] 2025-10-12 05:47:38,808 | INFO     | transexitcode: 0
[2025-10-12 01:48:43] 2025-10-12 05:47:38,808 | INFO     | exeerrorcode: 0
[2025-10-12 01:48:43] 2025-10-12 05:47:38,808 | INFO     | exeerrordiag: 
[2025-10-12 01:48:43] 2025-10-12 05:47:38,808 | INFO     | exitcode: 0
[2025-10-12 01:48:43] 2025-10-12 05:47:38,808 | INFO     | exitmsg: OK
[2025-10-12 01:48:43] 2025-10-12 05:47:38,808 | INFO     | cpuconsumptiontime: 52800 s
[2025-10-12 01:48:43] 2025-10-12 05:47:38,808 | INFO     | nevents: 400
[2025-10-12 01:48:43] 2025-10-12 05:47:38,809 | INFO     | neventsw: 0
[2025-10-12 01:48:43] 2025-10-12 05:47:38,809 | INFO     | pid: 6575
[2025-10-12 01:48:43] 2025-10-12 05:47:38,809 | INFO     | pgrp: 6575
[2025-10-12 01:48:43] 2025-10-12 05:47:38,809 | INFO     | corecount: 8
[2025-10-12 01:48:43] 2025-10-12 05:47:38,809 | INFO     | event service: False
[2025-10-12 01:48:43] 2025-10-12 05:47:38,810 | INFO     | sizes: {0: 2348635, 1: 2348834, 6: 2349096, 11: 2349124, 7125: 2376404, 7127: 2385402, 7129: 2385586, 7135: 2385808}
[2025-10-12 01:48:43] 2025-10-12 05:47:38,810 | INFO     | --------------------------------------------------
[2025-10-12 01:48:43] 2025-10-12 05:47:38,810 | INFO     | 
[2025-10-12 01:48:43] 2025-10-12 05:47:38,810 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 01:48:43] 2025-10-12 05:47:38,837 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 01:48:43] 2025-10-12 05:47:38,837 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 01:48:43] 2025-10-12 05:47:38,838 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 01:48:43] 2025-10-12 05:47:38,838 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 01:48:43] 2025-10-12 05:47:38,838 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 01:48:43] 2025-10-12 05:47:38,839 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 01:48:43] 2025-10-12 05:47:38,839 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 01:48:43] 2025-10-12 05:47:38,839 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 01:48:43] 2025-10-12 05:47:38,840 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 01:48:43] 2025-10-12 05:47:38,840 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 01:48:43] 2025-10-12 05:47:38,840 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 01:48:43] 2025-10-12 05:47:38,840 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 01:48:43] 2025-10-12 05:47:38,840 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 01:48:43] 2025-10-12 05:47:38,840 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 01:48:43] 2025-10-12 05:47:38,841 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 01:48:43] 2025-10-12 05:47:38,841 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 01:48:43] 2025-10-12 05:47:38,841 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 01:48:43] 2025-10-12 05:47:38,841 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 01:48:43] 2025-10-12 05:47:38,841 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 01:48:43] 2025-10-12 05:47:38,842 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 01:48:43] 2025-10-12 05:47:38,842 | INFO     | job 6838990337 has completed (purged errors)
[2025-10-12 01:48:43] 2025-10-12 05:47:38,842 | INFO     | overall cleanup function is called
[2025-10-12 01:48:43] 2025-10-12 05:47:38,908 | INFO     | number of running child processes to parent process 6575: 1
[2025-10-12 01:48:43] 2025-10-12 05:47:38,908 | INFO     | maximum number of monitored processes: 6
[2025-10-12 01:48:43] 2025-10-12 05:47:38,909 | INFO     | aborting job monitoring since job object (job id=6838990337) has expired
[2025-10-12 01:48:43] 2025-10-12 05:47:39,851 | INFO     | --- collectZombieJob: --- 10, [6575]
[2025-10-12 01:48:43] 2025-10-12 05:47:39,852 | INFO     | zombie collector waiting for pid 6575
[2025-10-12 01:48:43] 2025-10-12 05:47:39,852 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 01:48:43] 2025-10-12 05:47:39,852 | INFO     | collected zombie processes
[2025-10-12 01:48:43] 2025-10-12 05:47:39,852 | INFO     | will attempt to kill all subprocesses of pid=6575
[2025-10-12 01:48:43] 2025-10-12 05:47:39,922 | INFO     | process IDs to be killed: [6575] (in reverse order)
[2025-10-12 01:48:43] 2025-10-12 05:47:39,979 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 01:48:43] 2025-10-12 05:47:39,979 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 01:48:43] 2025-10-12 05:47:39,983 | INFO     | did not find any defunct processes belonging to 6575
[2025-10-12 01:48:43] 2025-10-12 05:47:39,986 | INFO     | did not find any defunct processes belonging to 6575
[2025-10-12 01:48:43] 2025-10-12 05:47:39,986 | INFO     | ready for new job
[2025-10-12 01:48:43] 2025-10-12 05:47:39,986 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 01:48:43] 2025-10-12 05:47:39,988 | INFO     | ***************************************
[2025-10-12 01:48:43] 2025-10-12 05:47:39,988 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 01:48:43] 2025-10-12 05:47:39,989 | INFO     | ***************************************
[2025-10-12 01:48:43] 2025-10-12 05:47:39,989 | INFO     | 
[2025-10-12 01:48:43] 2025-10-12 05:47:39,989 | INFO     | architecture information:
[2025-10-12 01:48:43] 2025-10-12 05:47:39,990 | INFO     | executing command: cat /etc/os-release
[2025-10-12 01:48:43] 2025-10-12 05:47:40,009 | INFO     | cat /etc/os-release:
[2025-10-12 01:48:43] NAME="CentOS Linux"
[2025-10-12 01:48:43] VERSION="7 (Core)"
[2025-10-12 01:48:43] ID="centos"
[2025-10-12 01:48:43] ID_LIKE="rhel fedora"
[2025-10-12 01:48:43] VERSION_ID="7"
[2025-10-12 01:48:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 01:48:43] ANSI_COLOR="0;31"
[2025-10-12 01:48:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 01:48:43] HOME_URL="https://www.centos.org/"
[2025-10-12 01:48:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 01:48:43] 
[2025-10-12 01:48:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 01:48:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 01:48:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 01:48:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 01:48:43] 
[2025-10-12 01:48:43] 2025-10-12 05:47:40,009 | INFO     | ***************************************
[2025-10-12 01:48:43] 2025-10-12 05:47:40,512 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 01:48:43] 2025-10-12 05:47:40,533 | INFO     | sufficient remaining disk space (18593349632 B)
[2025-10-12 01:48:43] 2025-10-12 05:47:40,533 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 01:48:43] 2025-10-12 05:47:40,533 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 01:48:43] 2025-10-12 05:47:40,534 | INFO     | update_server=False
[2025-10-12 01:48:43] 2025-10-12 05:47:40,534 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 01:48:43] 2025-10-12 05:47:40,534 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 01:48:43] 2025-10-12 05:47:40,535 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 01:48:43] 2025-10-12 05:47:40,535 | INFO     | aborting loop
[2025-10-12 01:48:43] 2025-10-12 05:47:40,899 | INFO     | all data control threads have been joined
[2025-10-12 01:48:43] 2025-10-12 05:47:41,540 | INFO     | [job] retrieve thread has finished
[2025-10-12 01:48:43] 2025-10-12 05:47:41,540 | INFO     | [job] queue monitor thread has finished
[2025-10-12 01:48:43] 2025-10-12 05:47:41,541 | INFO     | [job] job monitor thread has finished
[2025-10-12 01:48:43] 2025-10-12 05:47:41,603 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 01:48:43] 2025-10-12 05:47:41,693 | INFO     | all payload control threads have been joined
[2025-10-12 01:48:43] 2025-10-12 05:47:41,722 | INFO     | all job control threads have been joined
[2025-10-12 01:48:43] 2025-10-12 05:47:41,905 | INFO     | [data] control thread has finished
[2025-10-12 01:48:43] 2025-10-12 05:47:41,906 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 01:48:43] 2025-10-12 05:47:42,079 | INFO     | [job] validate thread has finished
[2025-10-12 01:48:43] 2025-10-12 05:47:42,121 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 01:48:43] 2025-10-12 05:47:42,309 | INFO     | [data] copytool_in thread has finished
[2025-10-12 01:48:43] 2025-10-12 05:47:42,360 | INFO     | [payload] failed_post thread has finished
[2025-10-12 01:48:43] 2025-10-12 05:47:42,699 | INFO     | [payload] control thread has finished
[2025-10-12 01:48:43] 2025-10-12 05:47:42,727 | INFO     | [job] control thread has finished
[2025-10-12 01:48:43] 2025-10-12 05:47:42,811 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 01:48:43] 2025-10-12 05:47:42,817 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 01:48:43] 2025-10-12 05:47:43,002 | INFO     | [payload] validate_post thread has finished
[2025-10-12 01:48:43] 2025-10-12 05:47:43,608 | INFO     | [data] copytool_out thread has finished
[2025-10-12 01:48:43] 2025-10-12 05:47:43,696 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 01:48:43] 2025-10-12 05:47:47,703 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 01:48:43] 2025-10-12 05:48:11,427 | INFO     | PID=32520 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 01:48:43] 2025-10-12 05:48:11,428 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 01:48:43] 2025-10-12 05:48:11,428 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 01:48:43] 2025-10-12 05:48:11,429 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 01:48:43] 2025-10-12 05:48:23,809 [wrapper] supervise_pilot (15 min periods counter: 9)
[2025-10-12 01:48:43] 2025-10-12 05:48:38,138 | INFO     | [monitor] cgroup control has ended
[2025-10-12 01:48:43] 2025-10-12 05:48:38,606 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139913742858048)>', '<ExcThread(monitor, started 139912703629056)>']
[2025-10-12 01:48:43] 2025-10-12 05:48:39,568 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 01:48:43] 2025-10-12 05:48:39,569 | INFO     | [monitor] control thread has ended
[2025-10-12 01:48:43] 2025-10-12 05:48:43,616 | INFO     | all workflow threads have been joined
[2025-10-12 01:48:43] 2025-10-12 05:48:43,617 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 01:48:43] 2025-10-12 05:48:43,617 | INFO     | traces error code: 0
[2025-10-12 01:48:43] 2025-10-12 05:48:43,618 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 01:48:43] 2025-10-12 05:48:43,726 [wrapper] ==== pilot stdout END ====
[2025-10-12 01:48:43] 2025-10-12 05:48:43,731 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 01:48:43] 2025-10-12 05:48:43,735 [wrapper] pilotpid: 32520
[2025-10-12 01:48:43] 2025-10-12 05:48:43,740 [wrapper] Pilot exit status: 0
[2025-10-12 01:48:43] 2025-10-12 05:48:43,759 [wrapper] pandaids: 6838990337
[2025-10-12 01:48:43] 2025-10-12 05:48:43,804 [wrapper] cleanup supervisor_pilot  6532 32521
[2025-10-12 01:48:43] 2025-10-12 05:48:43,809 [wrapper] Test setup, not cleaning
[2025-10-12 01:48:43] 2025-10-12 05:48:43,814 [wrapper] apfmon messages muted
[2025-10-12 01:48:43] 2025-10-12 05:48:43,818 [wrapper] ==== wrapper stdout END ====
[2025-10-12 01:48:43] 2025-10-12 05:48:43,822 [wrapper] ==== wrapper stderr END ====
[2025-10-12 01:48:43]  *** Error codes and diagnostics ***
[2025-10-12 01:48:43]     "exeErrorCode": 0,
[2025-10-12 01:48:43]     "exeErrorDiag": "",
[2025-10-12 01:48:43]     "pilotErrorCode": 0,
[2025-10-12 01:48:43]     "pilotErrorDiag": "",
[2025-10-12 01:48:43]  *** Listing of results directory ***
[2025-10-12 01:48:43] total 410108
[2025-10-12 01:48:43] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 18:04 pilot3.tar.gz
[2025-10-12 01:48:43] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 18:14 queuedata.json
[2025-10-12 01:48:43] -rwx------ 1 boincer umatlas     36292 Oct 11 18:14 runpilot2-wrapper.sh
[2025-10-12 01:48:43] -rw-r--r-- 1 boincer umatlas       100 Oct 11 23:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 01:48:43] -rwxr-xr-x 1 boincer umatlas      7986 Oct 11 23:48 run_atlas
[2025-10-12 01:48:43] -rw-r--r-- 1 boincer umatlas       105 Oct 11 23:48 job.xml
[2025-10-12 01:48:43] -rw-r--r-- 2 boincer umatlas 219748599 Oct 11 23:48 EVNT.46676267._002652.pool.root.1
[2025-10-12 01:48:43] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 23:48 start_atlas.sh
[2025-10-12 01:48:43] drwxrwx--x 2 boincer umatlas      4096 Oct 11 23:48 shared
[2025-10-12 01:48:43] -rw-r--r-- 2 boincer umatlas    569674 Oct 11 23:48 input.tar.gz
[2025-10-12 01:48:43] -rw-r--r-- 1 boincer umatlas         0 Oct 11 23:48 boinc_lockfile
[2025-10-12 01:48:43] -rw-r--r-- 1 boincer umatlas      2549 Oct 11 23:48 pandaJob.out
[2025-10-12 01:48:43] -rw------- 1 boincer umatlas    975512 Oct 11 23:48 agis_schedconf.cvmfs.json
[2025-10-12 01:48:43] -rw------- 1 boincer umatlas   1560580 Oct 11 23:48 agis_ddmendpoints.agis.ALL.json
[2025-10-12 01:48:43] drwx------ 5 boincer umatlas      4096 Oct 11 23:48 pilot3
[2025-10-12 01:48:43] -rw-r--r-- 1 boincer umatlas      5909 Oct 12 01:45 init_data.xml
[2025-10-12 01:48:43] -rw-r--r-- 1 boincer umatlas       530 Oct 12 01:46 boinc_task_state.xml
[2025-10-12 01:48:43] -rw------- 1 boincer umatlas 193568868 Oct 12 01:46 HITS.46676269._065990.pool.root.1
[2025-10-12 01:48:43] -rw------- 1 boincer umatlas      1060 Oct 12 01:47 memory_monitor_summary.json
[2025-10-12 01:48:43] -rw------- 1 boincer umatlas    357268 Oct 12 01:47 log.46676269._065990.job.log.tgz.1
[2025-10-12 01:48:43] -rw------- 1 boincer umatlas      7839 Oct 12 01:47 heartbeat.json
[2025-10-12 01:48:43] -rw------- 1 boincer umatlas        95 Oct 12 01:48 pilot_heartbeat.json
[2025-10-12 01:48:43] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 01:48 boinc_mmap_file
[2025-10-12 01:48:43] -rw-r--r-- 1 boincer umatlas        27 Oct 12 01:48 wrapper_checkpoint.txt
[2025-10-12 01:48:43] -rw------- 1 boincer umatlas      4746 Oct 12 01:48 pilotlog.txt
[2025-10-12 01:48:43] -rw------- 1 boincer umatlas   1010740 Oct 12 01:48 log.46676269._065990.job.log.1
[2025-10-12 01:48:43] -rw------- 1 boincer umatlas       357 Oct 12 01:48 output.list
[2025-10-12 01:48:43] -rw-r--r-- 1 boincer umatlas       620 Oct 12 01:48 runtime_log
[2025-10-12 01:48:43] -rw------- 1 boincer umatlas   1382400 Oct 12 01:48 result.tar.gz
[2025-10-12 01:48:43] -rw-r--r-- 1 boincer umatlas      8698 Oct 12 01:48 runtime_log.err
[2025-10-12 01:48:43] -rw------- 1 boincer umatlas       658 Oct 12 01:48 EVzLDmv1wR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm3mhNDmr569mm.diag
[2025-10-12 01:48:43] -rw-r--r-- 1 boincer umatlas     21310 Oct 12 01:48 stderr.txt
[2025-10-12 01:48:43] HITS file was successfully produced:
[2025-10-12 01:48:43] -rw------- 1 boincer umatlas 193568868 Oct 12 01:46 shared/HITS.pool.root.1
[2025-10-12 01:48:43]  *** Contents of shared directory: ***
[2025-10-12 01:48:43] total 405564
[2025-10-12 01:48:43] -rw-r--r-- 2 boincer umatlas 219748599 Oct 11 23:48 ATLAS.root_0
[2025-10-12 01:48:43] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 23:48 start_atlas.sh
[2025-10-12 01:48:43] -rw-r--r-- 2 boincer umatlas    569674 Oct 11 23:48 input.tar.gz
[2025-10-12 01:48:43] -rw------- 1 boincer umatlas 193568868 Oct 12 01:46 HITS.pool.root.1
[2025-10-12 01:48:43] -rw------- 1 boincer umatlas   1382400 Oct 12 01:48 result.tar.gz
01:48:45 (27945): run_atlas exited; CPU time 52800.654774
01:48:45 (27945): called boinc_finish(0)

</stderr_txt>
]]>

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