Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
23:41:13 (3310540): wrapper (7.7.26015): starting
23:41:13 (3310540): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 23:41:13] Arguments: --nthreads 12
[2025-10-11 23:41:13] Threads: 12
[2025-10-11 23:41:13] Checking for CVMFS
[2025-10-11 23:41:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 23:41:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 23:41:18] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 23:41:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 23:41:18] 2.8.1.0 3310827 0 29364 151606 3 1 3116140 4096000 0 130560 0 0 0.000 1292 813 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-11 23:41:18] CVMFS is ok
[2025-10-11 23:41:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 23:41:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 23:41:18] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-11 23:41:18] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-11 23:41:18] Further information can be found at the LHC@home message board.
[2025-10-11 23:41:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 23:41:18] Checking for apptainer binary...
[2025-10-11 23:41:18] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-10-11 23:41:18] apptainer is not installed, using version from CVMFS
[2025-10-11 23:41:18] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 23:41:19] farmville.blisteringsheep.pec
[2025-10-11 23:41:19] apptainer works
[2025-10-11 23:41:19] Set ATHENA_PROC_NUMBER=12
[2025-10-11 23:41:19] Set ATHENA_CORE_NUMBER=12
[2025-10-11 23:41:19] Starting ATLAS job with PandaID=6838990433
[2025-10-11 23:41:19] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/38 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 00:43:50]  *** The last 200 lines of the pilot log: ***
[2025-10-12 00:43:50]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-12 00:43:50]  replicas=None
[2025-10-12 00:43:50]  scope=mc23_13p6TeV
[2025-10-12 00:43:50]  status=None
[2025-10-12 00:43:50]  status_code=0
[2025-10-12 00:43:50]  storage_token=
[2025-10-12 00:43:50]  surl=/var/lib/boinc/slots/38/PanDA_Pilot-6838990433/log.46676269._066086.job.log.tgz.1
[2025-10-12 00:43:50]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9d/06/log.46676269._066086.job.log.tgz.1
[2025-10-12 00:43:50]  workdir=None
[2025-10-12 00:43:50] ]
[2025-10-12 00:43:50] 2025-10-12 04:43:03,221 | INFO     | transferring file log.46676269._066086.job.log.tgz.1 from /var/lib/boinc/slots/38/PanDA_Pilot-6838990433/log.46676269._066086.job.log.tgz.1 to /var/lib/boinc/slots
[2025-10-12 00:43:50] 2025-10-12 04:43:03,221 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/38/PanDA_Pilot-6838990433/log.46676269._066086.job.log.tgz.1 /var/lib/boinc/slots/38/log.46676269._066086.j
[2025-10-12 00:43:50] 2025-10-12 04:43:03,239 | INFO     | adding to output.list: log.46676269._066086.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9d/06/log.46676269._066086.job.log.tg
[2025-10-12 00:43:50] 2025-10-12 04:43:03,239 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 00:43:50] 2025-10-12 04:43:03,240 | INFO     | summary of transferred files:
[2025-10-12 00:43:50] 2025-10-12 04:43:03,240 | INFO     |  -- lfn=log.46676269._066086.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 00:43:50] 2025-10-12 04:43:03,240 | INFO     | stage-out finished correctly
[2025-10-12 00:43:50] 2025-10-12 04:43:03,495 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 00:43:50] 2025-10-12 04:43:03,802 | WARNING  | process 3322526 can no longer be monitored (due to stat problems) - aborting
[2025-10-12 00:43:50] 2025-10-12 04:43:03,803 | INFO     | using path: /var/lib/boinc/slots/38/PanDA_Pilot-6838990433/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 00:43:50] 2025-10-12 04:43:04,021 | INFO     | number of running child processes to parent process 3322526: 1
[2025-10-12 00:43:50] 2025-10-12 04:43:04,021 | INFO     | maximum number of monitored processes: 6
[2025-10-12 00:43:50] 2025-10-12 04:43:04,890 | INFO     | time since job start (3686s) is within the limit (172800.0s)
[2025-10-12 00:43:50] 2025-10-12 04:43:05,441 | INFO     | job 6838990433 has state=finished
[2025-10-12 00:43:50] 2025-10-12 04:43:05,442 | INFO     | preparing for final server update for job 6838990433 in state='finished'
[2025-10-12 00:43:50] 2025-10-12 04:43:05,442 | INFO     | this job has now completed (state=finished)
[2025-10-12 00:43:50] 2025-10-12 04:43:05,442 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 00:43:50] 2025-10-12 04:43:05,442 | INFO     | log transfer has been attempted: DONE
[2025-10-12 00:43:50] 2025-10-12 04:43:05,443 | INFO     | job 6838990433 has finished - writing final server update
[2025-10-12 00:43:50] 2025-10-12 04:43:05,443 | INFO     | total number of processed events: 400 (read)
[2025-10-12 00:43:50] 2025-10-12 04:43:05,443 | INFO     | executing command: lscpu
[2025-10-12 00:43:50] 2025-10-12 04:43:05,481 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 00:43:50] 2025-10-12 04:43:06,525 | INFO     | monitor loop #276: job 0:6838990433 is in state 'finished'
[2025-10-12 00:43:50] 2025-10-12 04:43:06,526 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 00:43:50] 2025-10-12 04:43:06,895 | INFO     | time since job start (3688s) is within the limit (172800.0s)
[2025-10-12 00:43:50] 2025-10-12 04:43:08,196 | INFO     | PID=3315280 has CPU usage=9.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 00:43:50] 2025-10-12 04:43:08,559 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 00:43:50] 2025-10-12 04:43:08,566 | INFO     | found 24 cores (12 cores per socket, 2 sockets) HT, CPU MHz: 2887.7625624999987
[2025-10-12 00:43:50] 2025-10-12 04:43:08,574 | INFO     | using path: /var/lib/boinc/slots/38/PanDA_Pilot-6838990433/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 00:43:50] 2025-10-12 04:43:08,575 | INFO     | extracted standard info from prmon json
[2025-10-12 00:43:50] 2025-10-12 04:43:08,575 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 00:43:50] 2025-10-12 04:43:08,575 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 00:43:50] 2025-10-12 04:43:08,576 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 00:43:50] 2025-10-12 04:43:08,576 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 00:43:50] 2025-10-12 04:43:08,578 | INFO     | fitting pss+swap vs Time
[2025-10-12 00:43:50] 2025-10-12 04:43:08,578 | INFO     | sum of square deviations: 46147842.0
[2025-10-12 00:43:50] 2025-10-12 04:43:08,578 | INFO     | sum of deviations: -7238157763.999999
[2025-10-12 00:43:50] 2025-10-12 04:43:08,578 | INFO     | mean x: 1760242412.0
[2025-10-12 00:43:50] 2025-10-12 04:43:08,579 | INFO     | mean y: 2923362.5094339624
[2025-10-12 00:43:50] 2025-10-12 04:43:08,579 | INFO     | -- intersect: 276091939202.94434
[2025-10-12 00:43:50] 2025-10-12 04:43:08,579 | INFO     | intersect: 276091939202.94434
[2025-10-12 00:43:50] 2025-10-12 04:43:08,579 | INFO     | chi2: 0.10593603624622817
[2025-10-12 00:43:50] 2025-10-12 04:43:08,579 | INFO     | -- intersect: 276091939202.94434
[2025-10-12 00:43:50] 2025-10-12 04:43:08,579 | INFO     | current memory leak: -156.85 B/s (using 53 data points, chi2=0.11)
[2025-10-12 00:43:50] 2025-10-12 04:43:08,580 | INFO     | could have reported an average CPU frequency of 2912 MHz (6 samples)
[2025-10-12 00:43:50] 2025-10-12 04:43:08,580 | INFO     | ..............................
[2025-10-12 00:43:50] 2025-10-12 04:43:08,580 | INFO     | . Timing measurements:
[2025-10-12 00:43:50] 2025-10-12 04:43:08,580 | INFO     | . get job = 0 s
[2025-10-12 00:43:50] 2025-10-12 04:43:08,580 | INFO     | . initial setup = 4 s
[2025-10-12 00:43:50] 2025-10-12 04:43:08,580 | INFO     | . payload setup = 4 s
[2025-10-12 00:43:50] 2025-10-12 04:43:08,581 | INFO     | . stage-in = 0 s
[2025-10-12 00:43:50] 2025-10-12 04:43:08,581 | INFO     | . payload execution = 3661 s
[2025-10-12 00:43:50] 2025-10-12 04:43:08,581 | INFO     | . stage-out = 0 s
[2025-10-12 00:43:50] 2025-10-12 04:43:08,581 | INFO     | . log creation = 0 s
[2025-10-12 00:43:50] 2025-10-12 04:43:08,581 | INFO     | ..............................
[2025-10-12 00:43:50] 2025-10-12 04:43:08,796 | INFO     | 
[2025-10-12 00:43:50] 2025-10-12 04:43:08,797 | INFO     | job summary report
[2025-10-12 00:43:50] 2025-10-12 04:43:08,797 | INFO     | --------------------------------------------------
[2025-10-12 00:43:50] 2025-10-12 04:43:08,797 | INFO     | PanDA job id: 6838990433
[2025-10-12 00:43:50] 2025-10-12 04:43:08,797 | INFO     | task id: 46676269
[2025-10-12 00:43:50] 2025-10-12 04:43:08,797 | INFO     | errors: (none)
[2025-10-12 00:43:50] 2025-10-12 04:43:08,797 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 00:43:50] 2025-10-12 04:43:08,797 | INFO     | pilot state: finished 
[2025-10-12 00:43:50] 2025-10-12 04:43:08,797 | INFO     | transexitcode: 0
[2025-10-12 00:43:50] 2025-10-12 04:43:08,797 | INFO     | exeerrorcode: 0
[2025-10-12 00:43:50] 2025-10-12 04:43:08,797 | INFO     | exeerrordiag: 
[2025-10-12 00:43:50] 2025-10-12 04:43:08,797 | INFO     | exitcode: 0
[2025-10-12 00:43:50] 2025-10-12 04:43:08,797 | INFO     | exitmsg: OK
[2025-10-12 00:43:50] 2025-10-12 04:43:08,798 | INFO     | cpuconsumptiontime: 39298 s
[2025-10-12 00:43:50] 2025-10-12 04:43:08,798 | INFO     | nevents: 400
[2025-10-12 00:43:50] 2025-10-12 04:43:08,798 | INFO     | neventsw: 0
[2025-10-12 00:43:50] 2025-10-12 04:43:08,798 | INFO     | pid: 3322526
[2025-10-12 00:43:50] 2025-10-12 04:43:08,798 | INFO     | pgrp: 3322526
[2025-10-12 00:43:50] 2025-10-12 04:43:08,798 | INFO     | corecount: 12
[2025-10-12 00:43:50] 2025-10-12 04:43:08,798 | INFO     | event service: False
[2025-10-12 00:43:50] 2025-10-12 04:43:08,798 | INFO     | sizes: {0: 2348685, 1: 2348884, 4: 2349146, 11: 2349174, 3670: 2383990, 3671: 2383990, 3676: 2384312}
[2025-10-12 00:43:50] 2025-10-12 04:43:08,798 | INFO     | --------------------------------------------------
[2025-10-12 00:43:50] 2025-10-12 04:43:08,798 | INFO     | 
[2025-10-12 00:43:50] 2025-10-12 04:43:08,798 | INFO     | executing command: ls -lF /var/lib/boinc/slots/38
[2025-10-12 00:43:50] 2025-10-12 04:43:08,814 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 00:43:50] 2025-10-12 04:43:08,814 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 00:43:50] 2025-10-12 04:43:08,815 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 00:43:50] 2025-10-12 04:43:08,815 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 00:43:50] 2025-10-12 04:43:08,815 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 00:43:50] 2025-10-12 04:43:08,815 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 00:43:50] 2025-10-12 04:43:08,815 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 00:43:50] 2025-10-12 04:43:08,815 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 00:43:50] 2025-10-12 04:43:08,815 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 00:43:50] 2025-10-12 04:43:08,815 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 00:43:50] 2025-10-12 04:43:08,815 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 00:43:50] 2025-10-12 04:43:08,815 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 00:43:50] 2025-10-12 04:43:08,816 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 00:43:50] 2025-10-12 04:43:08,816 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 00:43:50] 2025-10-12 04:43:08,816 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 00:43:50] 2025-10-12 04:43:08,816 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 00:43:50] 2025-10-12 04:43:08,816 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 00:43:50] 2025-10-12 04:43:08,816 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 00:43:50] 2025-10-12 04:43:08,816 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 00:43:50] 2025-10-12 04:43:08,816 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 00:43:50] 2025-10-12 04:43:08,816 | INFO     | job 6838990433 has completed (purged errors)
[2025-10-12 00:43:50] 2025-10-12 04:43:08,817 | INFO     | overall cleanup function is called
[2025-10-12 00:43:50] 2025-10-12 04:43:09,823 | INFO     | --- collectZombieJob: --- 10, [3322526]
[2025-10-12 00:43:50] 2025-10-12 04:43:09,823 | INFO     | zombie collector waiting for pid 3322526
[2025-10-12 00:43:50] 2025-10-12 04:43:09,823 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 00:43:50] 2025-10-12 04:43:09,824 | INFO     | collected zombie processes
[2025-10-12 00:43:50] 2025-10-12 04:43:09,824 | INFO     | will attempt to kill all subprocesses of pid=3322526
[2025-10-12 00:43:50] 2025-10-12 04:43:10,037 | INFO     | process IDs to be killed: [3322526] (in reverse order)
[2025-10-12 00:43:50] 2025-10-12 04:43:10,105 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 00:43:50] 2025-10-12 04:43:10,106 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 00:43:50] 2025-10-12 04:43:10,111 | INFO     | did not find any defunct processes belonging to 3322526
[2025-10-12 00:43:50] 2025-10-12 04:43:10,116 | INFO     | did not find any defunct processes belonging to 3322526
[2025-10-12 00:43:50] 2025-10-12 04:43:10,116 | INFO     | ready for new job
[2025-10-12 00:43:50] 2025-10-12 04:43:10,116 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 00:43:50] 2025-10-12 04:43:10,118 | INFO     | ***************************************
[2025-10-12 00:43:50] 2025-10-12 04:43:10,118 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 00:43:50] 2025-10-12 04:43:10,118 | INFO     | ***************************************
[2025-10-12 00:43:50] 2025-10-12 04:43:10,118 | INFO     | 
[2025-10-12 00:43:50] 2025-10-12 04:43:10,119 | INFO     | architecture information:
[2025-10-12 00:43:50] 2025-10-12 04:43:10,120 | INFO     | executing command: cat /etc/os-release
[2025-10-12 00:43:50] 2025-10-12 04:43:10,133 | INFO     | cat /etc/os-release:
[2025-10-12 00:43:50] NAME="CentOS Linux"
[2025-10-12 00:43:50] VERSION="7 (Core)"
[2025-10-12 00:43:50] ID="centos"
[2025-10-12 00:43:50] ID_LIKE="rhel fedora"
[2025-10-12 00:43:50] VERSION_ID="7"
[2025-10-12 00:43:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 00:43:50] ANSI_COLOR="0;31"
[2025-10-12 00:43:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 00:43:50] HOME_URL="https://www.centos.org/"
[2025-10-12 00:43:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 00:43:50] 
[2025-10-12 00:43:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 00:43:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 00:43:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 00:43:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 00:43:50] 
[2025-10-12 00:43:50] 2025-10-12 04:43:10,133 | INFO     | ***************************************
[2025-10-12 00:43:50] 2025-10-12 04:43:10,635 | INFO     | executing command: df -mP /var/lib/boinc/slots/38
[2025-10-12 00:43:50] 2025-10-12 04:43:10,651 | INFO     | sufficient remaining disk space (399418327040 B)
[2025-10-12 00:43:50] 2025-10-12 04:43:10,651 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 00:43:50] 2025-10-12 04:43:10,651 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 00:43:50] 2025-10-12 04:43:10,652 | INFO     | update_server=False
[2025-10-12 00:43:50] 2025-10-12 04:43:10,652 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 00:43:50] 2025-10-12 04:43:10,652 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 00:43:50] 2025-10-12 04:43:10,652 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 00:43:50] 2025-10-12 04:43:10,652 | INFO     | aborting loop
[2025-10-12 00:43:50] 2025-10-12 04:43:10,767 | INFO     | all data control threads have been joined
[2025-10-12 00:43:50] 2025-10-12 04:43:11,331 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 00:43:50] 2025-10-12 04:43:11,547 | INFO     | all job control threads have been joined
[2025-10-12 00:43:50] 2025-10-12 04:43:11,656 | INFO     | [job] retrieve thread has finished
[2025-10-12 00:43:50] 2025-10-12 04:43:11,657 | INFO     | [job] queue monitor thread has finished
[2025-10-12 00:43:50] 2025-10-12 04:43:11,657 | INFO     | [job] job monitor thread has finished
[2025-10-12 00:43:50] 2025-10-12 04:43:11,772 | INFO     | [data] control thread has finished
[2025-10-12 00:43:50] 2025-10-12 04:43:11,804 | INFO     | all payload control threads have been joined
[2025-10-12 00:43:50] 2025-10-12 04:43:12,050 | INFO     | [data] copytool_in thread has finished
[2025-10-12 00:43:50] 2025-10-12 04:43:12,104 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 00:43:50] 2025-10-12 04:43:12,148 | INFO     | [payload] failed_post thread has finished
[2025-10-12 00:43:50] 2025-10-12 04:43:12,174 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 00:43:50] 2025-10-12 04:43:12,508 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 00:43:50] 2025-10-12 04:43:12,552 | INFO     | [job] control thread has finished
[2025-10-12 00:43:50] 2025-10-12 04:43:12,809 | INFO     | [payload] control thread has finished
[2025-10-12 00:43:50] 2025-10-12 04:43:12,881 | INFO     | [job] validate thread has finished
[2025-10-12 00:43:50] 2025-10-12 04:43:13,180 | INFO     | [payload] validate_post thread has finished
[2025-10-12 00:43:50] 2025-10-12 04:43:13,336 | INFO     | [data] copytool_out thread has finished
[2025-10-12 00:43:50] 2025-10-12 04:43:14,095 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 00:43:50] 2025-10-12 04:43:18,100 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 00:43:50] 2025-10-12 04:43:20,872 | INFO     | job.realtimelogging is not enabled
[2025-10-12 00:43:50] 2025-10-12 04:43:21,877 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 00:43:50] 2025-10-12 04:43:40,528 | INFO     | PID=3315280 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 00:43:50] 2025-10-12 04:43:40,529 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 00:43:50] 2025-10-12 04:43:40,529 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 00:43:50] 2025-10-12 04:43:40,529 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 00:43:50] 2025-10-12 04:43:43,627 | INFO     | [monitor] cgroup control has ended
[2025-10-12 00:43:50] 2025-10-12 04:43:45,575 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140554789189440)>', '<ExcThread(monitor, started 140554239190784)>']
[2025-10-12 00:43:50] 2025-10-12 04:43:46,558 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 00:43:50] 2025-10-12 04:43:46,559 | INFO     | [monitor] control thread has ended
[2025-10-12 00:43:50] 2025-10-12 04:43:50,598 | INFO     | all workflow threads have been joined
[2025-10-12 00:43:50] 2025-10-12 04:43:50,598 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 00:43:50] 2025-10-12 04:43:50,599 | INFO     | traces error code: 0
[2025-10-12 00:43:50] 2025-10-12 04:43:50,599 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 00:43:50] 2025-10-12 04:43:50,746 [wrapper] ==== pilot stdout END ====
[2025-10-12 00:43:50] 2025-10-12 04:43:50,748 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 00:43:50] 2025-10-12 04:43:50,750 [wrapper] pilotpid: 3315280
[2025-10-12 00:43:50] 2025-10-12 04:43:50,752 [wrapper] Pilot exit status: 0
[2025-10-12 00:43:50] 2025-10-12 04:43:50,760 [wrapper] pandaids: 6838990433
[2025-10-12 00:43:50] 2025-10-12 04:43:50,797 [wrapper] cleanup supervisor_pilot 3401076 3315281
[2025-10-12 00:43:50] 2025-10-12 04:43:50,799 [wrapper] Test setup, not cleaning
[2025-10-12 00:43:50] 2025-10-12 04:43:50,801 [wrapper] apfmon messages muted
[2025-10-12 00:43:50] 2025-10-12 04:43:50,803 [wrapper] ==== wrapper stdout END ====
[2025-10-12 00:43:50] 2025-10-12 04:43:50,805 [wrapper] ==== wrapper stderr END ====
[2025-10-12 00:43:50]  *** Error codes and diagnostics ***
[2025-10-12 00:43:50]     "exeErrorCode": 0,
[2025-10-12 00:43:50]     "exeErrorDiag": "",
[2025-10-12 00:43:50]     "pilotErrorCode": 0,
[2025-10-12 00:43:50]     "pilotErrorDiag": "",
[2025-10-12 00:43:50]  *** Listing of results directory ***
[2025-10-12 00:43:50] total 412072
[2025-10-12 00:43:50] -rw-r--r-- 1 boinc boinc    557409 Oct 11 18:04 pilot3.tar.gz
[2025-10-12 00:43:50] -rw-r--r-- 1 boinc boinc      5112 Oct 11 18:20 queuedata.json
[2025-10-12 00:43:50] -rwx------ 1 boinc boinc     36292 Oct 11 18:22 runpilot2-wrapper.sh
[2025-10-12 00:43:50] -rw-r--r-- 1 boinc boinc       100 Oct 11 23:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 00:43:50] -rwxr-xr-x 1 boinc boinc      7986 Oct 11 23:41 run_atlas
[2025-10-12 00:43:50] -rw-r--r-- 1 boinc boinc       105 Oct 11 23:41 job.xml
[2025-10-12 00:43:50] -rw-r--r-- 2 boinc boinc 221322723 Oct 11 23:41 EVNT.46676267._002657.pool.root.1
[2025-10-12 00:43:50] drwxrwx--x 1 boinc boinc        76 Oct 11 23:41 shared
[2025-10-12 00:43:50] -rw-r--r-- 2 boinc boinc    569680 Oct 11 23:41 input.tar.gz
[2025-10-12 00:43:50] -rw-r--r-- 2 boinc boinc     15120 Oct 11 23:41 start_atlas.sh
[2025-10-12 00:43:50] -rw-r--r-- 1 boinc boinc         0 Oct 11 23:41 boinc_setup_complete
[2025-10-12 00:43:50] -rw-r--r-- 1 boinc boinc      9182 Oct 11 23:41 init_data.xml
[2025-10-12 00:43:50] -rw-r--r-- 1 boinc boinc         0 Oct 11 23:41 boinc_lockfile
[2025-10-12 00:43:50] -rw-r--r-- 1 boinc boinc      2549 Oct 11 23:41 pandaJob.out
[2025-10-12 00:43:50] -rw------- 1 boinc boinc    975512 Oct 11 23:41 agis_schedconf.cvmfs.json
[2025-10-12 00:43:50] -rw------- 1 boinc boinc   1560580 Oct 11 23:41 agis_ddmendpoints.agis.ALL.json
[2025-10-12 00:43:50] drwx------ 1 boinc boinc       414 Oct 11 23:41 pilot3
[2025-10-12 00:43:50] -rw-r--r-- 1 boinc boinc       529 Oct 12 00:42 boinc_task_state.xml
[2025-10-12 00:43:50] -rw------- 1 boinc boinc 194932610 Oct 12 00:42 HITS.46676269._066086.pool.root.1
[2025-10-12 00:43:50] -rw------- 1 boinc boinc      1034 Oct 12 00:42 memory_monitor_summary.json
[2025-10-12 00:43:50] -rw------- 1 boinc boinc    359481 Oct 12 00:43 log.46676269._066086.job.log.tgz.1
[2025-10-12 00:43:50] -rw------- 1 boinc boinc      7829 Oct 12 00:43 heartbeat.json
[2025-10-12 00:43:50] -rw-r--r-- 1 boinc boinc      8192 Oct 12 00:43 boinc_mmap_file
[2025-10-12 00:43:50] -rw-r--r-- 1 boinc boinc        27 Oct 12 00:43 wrapper_checkpoint.txt
[2025-10-12 00:43:50] -rw------- 1 boinc boinc        95 Oct 12 00:43 pilot_heartbeat.json
[2025-10-12 00:43:50] -rw------- 1 boinc boinc      4822 Oct 12 00:43 pilotlog.txt
[2025-10-12 00:43:50] -rw------- 1 boinc boinc    548007 Oct 12 00:43 log.46676269._066086.job.log.1
[2025-10-12 00:43:50] -rw------- 1 boinc boinc       357 Oct 12 00:43 output.list
[2025-10-12 00:43:50] -rw-r--r-- 1 boinc boinc       620 Oct 12 00:43 runtime_log
[2025-10-12 00:43:50] -rw------- 1 boinc boinc    931840 Oct 12 00:43 result.tar.gz
[2025-10-12 00:43:50] -rw-r--r-- 1 boinc boinc      8804 Oct 12 00:43 runtime_log.err
[2025-10-12 00:43:50] -rw------- 1 boinc boinc       674 Oct 12 00:43 inHKDmt9wR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmthSMDm8JKfIn.diag
[2025-10-12 00:43:50] -rw-r--r-- 1 boinc boinc     22292 Oct 12 00:43 stderr.txt
[2025-10-12 00:43:50] HITS file was successfully produced:
[2025-10-12 00:43:50] -rw------- 1 boinc boinc 194932610 Oct 12 00:42 shared/HITS.pool.root.1
[2025-10-12 00:43:50]  *** Contents of shared directory: ***
[2025-10-12 00:43:50] total 407988
[2025-10-12 00:43:50] -rw-r--r-- 2 boinc boinc 221322723 Oct 11 23:41 ATLAS.root_0
[2025-10-12 00:43:50] -rw-r--r-- 2 boinc boinc    569680 Oct 11 23:41 input.tar.gz
[2025-10-12 00:43:50] -rw-r--r-- 2 boinc boinc     15120 Oct 11 23:41 start_atlas.sh
[2025-10-12 00:43:50] -rw------- 1 boinc boinc 194932610 Oct 12 00:42 HITS.pool.root.1
[2025-10-12 00:43:50] -rw------- 1 boinc boinc    931840 Oct 12 00:43 result.tar.gz
00:43:52 (3310540): run_atlas exited; CPU time 39354.263294
00:43:52 (3310540): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN