Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
23:57:13 (27693): wrapper (7.7.26015): starting
23:57:13 (27693): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 23:57:13] Arguments: --nthreads 8
[2025-10-11 23:57:13] Threads: 8
[2025-10-11 23:57:13] Checking for CVMFS
[2025-10-11 23:57:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 23:57:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 23:57:13] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 23:57:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 23:57:13] 2.11.2.0 3213 627307 250548 151606 2 188 20213971 20275200 917 130560 1 357348492 99.992 26043360 20163 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 23:57:13] CVMFS is ok
[2025-10-11 23:57:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 23:57:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 23:57:13] Further information can be found at the LHC@home message board.
[2025-10-11 23:57:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 23:57:13] Checking for apptainer binary...
[2025-10-11 23:57:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 23:57:13] Running /usr/bin/apptainer --version
[2025-10-11 23:57:13] apptainer version 1.3.2-1.el7
[2025-10-11 23:57:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 23:57:14] c-205-38.aglt2.org
[2025-10-11 23:57:14] apptainer works
[2025-10-11 23:57:14] Set ATHENA_PROC_NUMBER=8
[2025-10-11 23:57:14] Set ATHENA_CORE_NUMBER=8
[2025-10-11 23:57:14] Starting ATLAS job with PandaID=6838990086
[2025-10-11 23:57:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 00:54:48]  *** The last 200 lines of the pilot log: ***
[2025-10-12 00:54:48]  scope=mc23_13p6TeV
[2025-10-12 00:54:48]  status=None
[2025-10-12 00:54:48]  status_code=0
[2025-10-12 00:54:48]  storage_token=
[2025-10-12 00:54:48]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6838990086/log.46676269._065807.job.log.tgz.1
[2025-10-12 00:54:48]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/87/11/log.46676269._065807.job.log.tgz.1
[2025-10-12 00:54:48]  workdir=None
[2025-10-12 00:54:48] ]
[2025-10-12 00:54:48] 2025-10-12 04:54:11,047 | INFO     | transferring file log.46676269._065807.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6838990086/log.46676269._065807.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 00:54:48] 2025-10-12 04:54:11,048 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6838990086/log.46676269._065807.job.log.tgz.1 /tmp/boinchome/slots/1/log.46676269._065807.job
[2025-10-12 00:54:48] 2025-10-12 04:54:11,062 | INFO     | adding to output.list: log.46676269._065807.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/87/11/log.46676269._065807.job.log.tg
[2025-10-12 00:54:48] 2025-10-12 04:54:11,063 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 00:54:48] 2025-10-12 04:54:11,063 | INFO     | summary of transferred files:
[2025-10-12 00:54:48] 2025-10-12 04:54:11,063 | INFO     |  -- lfn=log.46676269._065807.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 00:54:48] 2025-10-12 04:54:11,063 | INFO     | stage-out finished correctly
[2025-10-12 00:54:48] 2025-10-12 04:54:11,943 | WARNING  | process 5464 can no longer be monitored (due to stat problems) - aborting
[2025-10-12 00:54:48] 2025-10-12 04:54:11,943 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6838990086/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 00:54:48] 2025-10-12 04:54:11,958 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 00:54:48] 2025-10-12 04:54:12,115 | INFO     | number of running child processes to parent process 5464: 1
[2025-10-12 00:54:48] 2025-10-12 04:54:12,115 | INFO     | maximum number of monitored processes: 6
[2025-10-12 00:54:48] 2025-10-12 04:54:12,609 | INFO     | job 6838990086 has state=finished
[2025-10-12 00:54:48] 2025-10-12 04:54:12,609 | INFO     | preparing for final server update for job 6838990086 in state='finished'
[2025-10-12 00:54:48] 2025-10-12 04:54:12,610 | INFO     | this job has now completed (state=finished)
[2025-10-12 00:54:48] 2025-10-12 04:54:12,610 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 00:54:48] 2025-10-12 04:54:12,610 | INFO     | log transfer has been attempted: DONE
[2025-10-12 00:54:48] 2025-10-12 04:54:12,610 | INFO     | job 6838990086 has finished - writing final server update
[2025-10-12 00:54:48] 2025-10-12 04:54:12,611 | INFO     | total number of processed events: 400 (read)
[2025-10-12 00:54:48] 2025-10-12 04:54:12,611 | INFO     | executing command: lscpu
[2025-10-12 00:54:48] 2025-10-12 04:54:12,642 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 00:54:48] 2025-10-12 04:54:12,714 | INFO     | time since job start (3410s) is within the limit (172800.0s)
[2025-10-12 00:54:48] 2025-10-12 04:54:14,618 | INFO     | monitor loop #262: job 0:6838990086 is in state 'finished'
[2025-10-12 00:54:48] 2025-10-12 04:54:14,618 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 00:54:48] 2025-10-12 04:54:14,719 | INFO     | time since job start (3412s) is within the limit (172800.0s)
[2025-10-12 00:54:48] 2025-10-12 04:54:15,146 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 00:54:48] 2025-10-12 04:54:15,148 | INFO     | found 16 cores (8 cores per socket, 2 sockets) , CPU MHz: 2911.1569375000004
[2025-10-12 00:54:48] 2025-10-12 04:54:15,150 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6838990086/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 00:54:48] 2025-10-12 04:54:15,151 | INFO     | extracted standard info from prmon json
[2025-10-12 00:54:48] 2025-10-12 04:54:15,151 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 00:54:48] 2025-10-12 04:54:15,151 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 00:54:48] 2025-10-12 04:54:15,151 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 00:54:48] 2025-10-12 04:54:15,151 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 00:54:48] 2025-10-12 04:54:15,152 | INFO     | fitting pss+swap vs Time
[2025-10-12 00:54:48] 2025-10-12 04:54:15,152 | INFO     | sum of square deviations: 36465800.0
[2025-10-12 00:54:48] 2025-10-12 04:54:15,152 | INFO     | sum of deviations: -395473797.00000006
[2025-10-12 00:54:48] 2025-10-12 04:54:15,152 | INFO     | mean x: 1760243232.0
[2025-10-12 00:54:48] 2025-10-12 04:54:15,153 | INFO     | mean y: 2519921.7551020407
[2025-10-12 00:54:48] 2025-10-12 04:54:15,153 | INFO     | -- intersect: 19092463776.06769
[2025-10-12 00:54:48] 2025-10-12 04:54:15,153 | INFO     | intersect: 19092463776.06769
[2025-10-12 00:54:48] 2025-10-12 04:54:15,153 | INFO     | chi2: 0.008595505003046486
[2025-10-12 00:54:48] 2025-10-12 04:54:15,153 | INFO     | -- intersect: 19092463776.06769
[2025-10-12 00:54:48] 2025-10-12 04:54:15,153 | INFO     | current memory leak: -10.85 B/s (using 49 data points, chi2=0.01)
[2025-10-12 00:54:48] 2025-10-12 04:54:15,153 | INFO     | could have reported an average CPU frequency of 2855 MHz (5 samples)
[2025-10-12 00:54:48] 2025-10-12 04:54:15,153 | INFO     | ..............................
[2025-10-12 00:54:48] 2025-10-12 04:54:15,153 | INFO     | . Timing measurements:
[2025-10-12 00:54:48] 2025-10-12 04:54:15,153 | INFO     | . get job = 0 s
[2025-10-12 00:54:48] 2025-10-12 04:54:15,153 | INFO     | . initial setup = 2 s
[2025-10-12 00:54:48] 2025-10-12 04:54:15,153 | INFO     | . payload setup = 3 s
[2025-10-12 00:54:48] 2025-10-12 04:54:15,154 | INFO     | . stage-in = 0 s
[2025-10-12 00:54:48] 2025-10-12 04:54:15,154 | INFO     | . payload execution = 3387 s
[2025-10-12 00:54:48] 2025-10-12 04:54:15,154 | INFO     | . stage-out = 0 s
[2025-10-12 00:54:48] 2025-10-12 04:54:15,154 | INFO     | . log creation = 0 s
[2025-10-12 00:54:48] 2025-10-12 04:54:15,154 | INFO     | ..............................
[2025-10-12 00:54:48] 2025-10-12 04:54:15,230 | INFO     | 
[2025-10-12 00:54:48] 2025-10-12 04:54:15,230 | INFO     | job summary report
[2025-10-12 00:54:48] 2025-10-12 04:54:15,230 | INFO     | --------------------------------------------------
[2025-10-12 00:54:48] 2025-10-12 04:54:15,231 | INFO     | PanDA job id: 6838990086
[2025-10-12 00:54:48] 2025-10-12 04:54:15,231 | INFO     | task id: 46676269
[2025-10-12 00:54:48] 2025-10-12 04:54:15,231 | INFO     | errors: (none)
[2025-10-12 00:54:48] 2025-10-12 04:54:15,231 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 00:54:48] 2025-10-12 04:54:15,231 | INFO     | pilot state: finished 
[2025-10-12 00:54:48] 2025-10-12 04:54:15,231 | INFO     | transexitcode: 0
[2025-10-12 00:54:48] 2025-10-12 04:54:15,231 | INFO     | exeerrorcode: 0
[2025-10-12 00:54:48] 2025-10-12 04:54:15,231 | INFO     | exeerrordiag: 
[2025-10-12 00:54:48] 2025-10-12 04:54:15,231 | INFO     | exitcode: 0
[2025-10-12 00:54:48] 2025-10-12 04:54:15,231 | INFO     | exitmsg: OK
[2025-10-12 00:54:48] 2025-10-12 04:54:15,232 | INFO     | cpuconsumptiontime: 24279 s
[2025-10-12 00:54:48] 2025-10-12 04:54:15,232 | INFO     | nevents: 400
[2025-10-12 00:54:48] 2025-10-12 04:54:15,232 | INFO     | neventsw: 0
[2025-10-12 00:54:48] 2025-10-12 04:54:15,232 | INFO     | pid: 5464
[2025-10-12 00:54:48] 2025-10-12 04:54:15,232 | INFO     | pgrp: 5464
[2025-10-12 00:54:48] 2025-10-12 04:54:15,232 | INFO     | corecount: 8
[2025-10-12 00:54:48] 2025-10-12 04:54:15,232 | INFO     | event service: False
[2025-10-12 00:54:48] 2025-10-12 04:54:15,232 | INFO     | sizes: {0: 2348685, 1: 2348884, 4: 2349146, 11: 2349174, 3394: 2374871, 3395: 2383869, 3396: 2384053, 3399: 2384279}
[2025-10-12 00:54:48] 2025-10-12 04:54:15,232 | INFO     | --------------------------------------------------
[2025-10-12 00:54:48] 2025-10-12 04:54:15,233 | INFO     | 
[2025-10-12 00:54:48] 2025-10-12 04:54:15,233 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-12 00:54:48] 2025-10-12 04:54:15,252 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 00:54:48] 2025-10-12 04:54:15,252 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 00:54:48] 2025-10-12 04:54:15,252 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 00:54:48] 2025-10-12 04:54:15,252 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 00:54:48] 2025-10-12 04:54:15,253 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 00:54:48] 2025-10-12 04:54:15,253 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 00:54:48] 2025-10-12 04:54:15,253 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 00:54:48] 2025-10-12 04:54:15,253 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 00:54:48] 2025-10-12 04:54:15,253 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 00:54:48] 2025-10-12 04:54:15,253 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 00:54:48] 2025-10-12 04:54:15,253 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 00:54:48] 2025-10-12 04:54:15,253 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 00:54:48] 2025-10-12 04:54:15,253 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 00:54:48] 2025-10-12 04:54:15,254 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 00:54:48] 2025-10-12 04:54:15,254 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 00:54:48] 2025-10-12 04:54:15,254 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 00:54:48] 2025-10-12 04:54:15,254 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 00:54:48] 2025-10-12 04:54:15,254 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 00:54:48] 2025-10-12 04:54:15,254 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 00:54:48] 2025-10-12 04:54:15,254 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 00:54:48] 2025-10-12 04:54:15,254 | INFO     | job 6838990086 has completed (purged errors)
[2025-10-12 00:54:48] 2025-10-12 04:54:15,255 | INFO     | overall cleanup function is called
[2025-10-12 00:54:48] 2025-10-12 04:54:16,262 | INFO     | --- collectZombieJob: --- 10, [5464]
[2025-10-12 00:54:48] 2025-10-12 04:54:16,262 | INFO     | zombie collector waiting for pid 5464
[2025-10-12 00:54:48] 2025-10-12 04:54:16,263 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 00:54:48] 2025-10-12 04:54:16,263 | INFO     | collected zombie processes
[2025-10-12 00:54:48] 2025-10-12 04:54:16,263 | INFO     | will attempt to kill all subprocesses of pid=5464
[2025-10-12 00:54:48] 2025-10-12 04:54:16,366 | INFO     | process IDs to be killed: [5464] (in reverse order)
[2025-10-12 00:54:48] 2025-10-12 04:54:16,417 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 00:54:48] 2025-10-12 04:54:16,418 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 00:54:48] 2025-10-12 04:54:16,421 | INFO     | did not find any defunct processes belonging to 5464
[2025-10-12 00:54:48] 2025-10-12 04:54:16,424 | INFO     | did not find any defunct processes belonging to 5464
[2025-10-12 00:54:48] 2025-10-12 04:54:16,424 | INFO     | ready for new job
[2025-10-12 00:54:48] 2025-10-12 04:54:16,424 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 00:54:48] 2025-10-12 04:54:16,426 | INFO     | ***************************************
[2025-10-12 00:54:48] 2025-10-12 04:54:16,426 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 00:54:48] 2025-10-12 04:54:16,426 | INFO     | ***************************************
[2025-10-12 00:54:48] 2025-10-12 04:54:16,426 | INFO     | 
[2025-10-12 00:54:48] 2025-10-12 04:54:16,428 | INFO     | architecture information:
[2025-10-12 00:54:48] 2025-10-12 04:54:16,428 | INFO     | executing command: cat /etc/os-release
[2025-10-12 00:54:48] 2025-10-12 04:54:16,442 | INFO     | cat /etc/os-release:
[2025-10-12 00:54:48] NAME="CentOS Linux"
[2025-10-12 00:54:48] VERSION="7 (Core)"
[2025-10-12 00:54:48] ID="centos"
[2025-10-12 00:54:48] ID_LIKE="rhel fedora"
[2025-10-12 00:54:48] VERSION_ID="7"
[2025-10-12 00:54:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 00:54:48] ANSI_COLOR="0;31"
[2025-10-12 00:54:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 00:54:48] HOME_URL="https://www.centos.org/"
[2025-10-12 00:54:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 00:54:48] 
[2025-10-12 00:54:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 00:54:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 00:54:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 00:54:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 00:54:48] 
[2025-10-12 00:54:48] 2025-10-12 04:54:16,442 | INFO     | ***************************************
[2025-10-12 00:54:48] 2025-10-12 04:54:16,945 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-12 00:54:48] 2025-10-12 04:54:16,963 | INFO     | sufficient remaining disk space (32726056960 B)
[2025-10-12 00:54:48] 2025-10-12 04:54:16,963 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 00:54:48] 2025-10-12 04:54:16,964 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 00:54:48] 2025-10-12 04:54:16,964 | INFO     | update_server=False
[2025-10-12 00:54:48] 2025-10-12 04:54:16,964 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 00:54:48] 2025-10-12 04:54:16,964 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 00:54:48] 2025-10-12 04:54:16,965 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 00:54:48] 2025-10-12 04:54:17,121 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 00:54:48] 2025-10-12 04:54:17,122 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 00:54:48] 2025-10-12 04:54:17,122 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 00:54:48] 2025-10-12 04:54:17,122 | INFO     | will abort loop
[2025-10-12 00:54:48] 2025-10-12 04:54:17,442 | INFO     | all data control threads have been joined
[2025-10-12 00:54:48] 2025-10-12 04:54:17,970 | INFO     | [job] retrieve thread has finished
[2025-10-12 00:54:48] 2025-10-12 04:54:17,970 | INFO     | [job] queue monitor thread has finished
[2025-10-12 00:54:48] 2025-10-12 04:54:18,045 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 00:54:48] 2025-10-12 04:54:18,056 | INFO     | [data] copytool_in thread has finished
[2025-10-12 00:54:48] 2025-10-12 04:54:18,057 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 00:54:48] 2025-10-12 04:54:18,061 | INFO     | [job] validate thread has finished
[2025-10-12 00:54:48] 2025-10-12 04:54:18,127 | INFO     | [job] job monitor thread has finished
[2025-10-12 00:54:48] 2025-10-12 04:54:18,136 | INFO     | all payload control threads have been joined
[2025-10-12 00:54:48] 2025-10-12 04:54:18,289 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 00:54:48] 2025-10-12 04:54:18,366 | INFO     | all job control threads have been joined
[2025-10-12 00:54:48] 2025-10-12 04:54:18,447 | INFO     | [data] control thread has finished
[2025-10-12 00:54:48] 2025-10-12 04:54:18,700 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 00:54:48] 2025-10-12 04:54:18,889 | INFO     | [payload] failed_post thread has finished
[2025-10-12 00:54:48] 2025-10-12 04:54:18,970 | INFO     | [data] copytool_out thread has finished
[2025-10-12 00:54:48] 2025-10-12 04:54:19,139 | INFO     | [payload] control thread has finished
[2025-10-12 00:54:48] 2025-10-12 04:54:19,371 | INFO     | [job] control thread has finished
[2025-10-12 00:54:48] 2025-10-12 04:54:19,504 | INFO     | [payload] validate_post thread has finished
[2025-10-12 00:54:48] 2025-10-12 04:54:22,050 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 00:54:48] 2025-10-12 04:54:27,515 | INFO     | [monitor] cgroup control has ended
[2025-10-12 00:54:48] 2025-10-12 04:54:27,640 | INFO     | job.realtimelogging is not enabled
[2025-10-12 00:54:48] 2025-10-12 04:54:28,646 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 00:54:48] 2025-10-12 04:54:29,048 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139858224895808)>', '<ExcThread(monitor, started 139857934403328)>']
[2025-10-12 00:54:48] 2025-10-12 04:54:34,074 | INFO     | all workflow threads have been joined
[2025-10-12 00:54:48] 2025-10-12 04:54:34,074 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 00:54:48] 2025-10-12 04:54:34,075 | INFO     | traces error code: 0
[2025-10-12 00:54:48] 2025-10-12 04:54:34,075 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 00:54:48] 2025-10-12 04:54:47,915 | INFO     | PID=31357 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 00:54:48] 2025-10-12 04:54:47,915 | INFO     | .. there are 2 such processes running
[2025-10-12 00:54:48] 2025-10-12 04:54:47,915 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 00:54:48] 2025-10-12 04:54:47,915 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 00:54:48] 2025-10-12 04:54:47,915 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 00:54:48] 2025-10-12 04:54:47,915 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 00:54:48] 2025-10-12 04:54:47,916 | INFO     | [monitor] control thread has ended
[2025-10-12 00:54:48] 2025-10-12 04:54:47,987 [wrapper] ==== pilot stdout END ====
[2025-10-12 00:54:48] 2025-10-12 04:54:47,991 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 00:54:48] 2025-10-12 04:54:47,994 [wrapper] pilotpid: 31357
[2025-10-12 00:54:48] 2025-10-12 04:54:47,997 [wrapper] Pilot exit status: 0
[2025-10-12 00:54:48] 2025-10-12 04:54:48,007 [wrapper] pandaids: 6838990086
[2025-10-12 00:54:48] 2025-10-12 04:54:48,039 [wrapper] cleanup supervisor_pilot 12565 31358
[2025-10-12 00:54:48] 2025-10-12 04:54:48,042 [wrapper] Test setup, not cleaning
[2025-10-12 00:54:48] 2025-10-12 04:54:48,045 [wrapper] apfmon messages muted
[2025-10-12 00:54:48] 2025-10-12 04:54:48,047 [wrapper] ==== wrapper stdout END ====
[2025-10-12 00:54:48] 2025-10-12 04:54:48,050 [wrapper] ==== wrapper stderr END ====
[2025-10-12 00:54:48]  *** Error codes and diagnostics ***
[2025-10-12 00:54:48]     "exeErrorCode": 0,
[2025-10-12 00:54:48]     "exeErrorDiag": "",
[2025-10-12 00:54:48]     "pilotErrorCode": 0,
[2025-10-12 00:54:48]     "pilotErrorDiag": "",
[2025-10-12 00:54:48]  *** Listing of results directory ***
[2025-10-12 00:54:48] total 410560
[2025-10-12 00:54:48] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 18:04 pilot3.tar.gz
[2025-10-12 00:54:48] -rwx------ 1 boincer umatlas     36292 Oct 11 18:05 runpilot2-wrapper.sh
[2025-10-12 00:54:48] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 18:05 queuedata.json
[2025-10-12 00:54:48] -rw-r--r-- 1 boincer umatlas       100 Oct 11 23:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 00:54:48] -rwxr-xr-x 1 boincer umatlas      7986 Oct 11 23:57 run_atlas
[2025-10-12 00:54:48] -rw-r--r-- 1 boincer umatlas       105 Oct 11 23:57 job.xml
[2025-10-12 00:54:48] -rw-r--r-- 2 boincer umatlas 221537943 Oct 11 23:57 EVNT.46676267._002643.pool.root.1
[2025-10-12 00:54:48] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 23:57 start_atlas.sh
[2025-10-12 00:54:48] drwxrwx--x 2 boincer umatlas      4096 Oct 11 23:57 shared
[2025-10-12 00:54:48] -rw-r--r-- 2 boincer umatlas    569676 Oct 11 23:57 input.tar.gz
[2025-10-12 00:54:48] -rw-r--r-- 1 boincer umatlas         0 Oct 11 23:57 boinc_lockfile
[2025-10-12 00:54:48] -rw-r--r-- 1 boincer umatlas      2549 Oct 11 23:57 pandaJob.out
[2025-10-12 00:54:48] -rw------- 1 boincer umatlas    975512 Oct 11 23:57 agis_schedconf.cvmfs.json
[2025-10-12 00:54:48] -rw------- 1 boincer umatlas   1560580 Oct 11 23:57 agis_ddmendpoints.agis.ALL.json
[2025-10-12 00:54:48] drwx------ 5 boincer umatlas      4096 Oct 11 23:57 pilot3
[2025-10-12 00:54:48] -rw-r--r-- 1 boincer umatlas      6134 Oct 12 00:45 init_data.xml
[2025-10-12 00:54:48] -rw------- 1 boincer umatlas 193274298 Oct 12 00:53 HITS.46676269._065807.pool.root.1
[2025-10-12 00:54:48] -rw------- 1 boincer umatlas        95 Oct 12 00:53 pilot_heartbeat.json
[2025-10-12 00:54:48] -rw------- 1 boincer umatlas      1045 Oct 12 00:54 memory_monitor_summary.json
[2025-10-12 00:54:48] -rw------- 1 boincer umatlas    324723 Oct 12 00:54 log.46676269._065807.job.log.tgz.1
[2025-10-12 00:54:48] -rw-r--r-- 1 boincer umatlas       529 Oct 12 00:54 boinc_task_state.xml
[2025-10-12 00:54:48] -rw------- 1 boincer umatlas      7835 Oct 12 00:54 heartbeat.json
[2025-10-12 00:54:48] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 00:54 boinc_mmap_file
[2025-10-12 00:54:48] -rw-r--r-- 1 boincer umatlas        27 Oct 12 00:54 wrapper_checkpoint.txt
[2025-10-12 00:54:48] -rw------- 1 boincer umatlas       820 Oct 12 00:54 pilotlog.txt
[2025-10-12 00:54:48] -rw------- 1 boincer umatlas    523898 Oct 12 00:54 log.46676269._065807.job.log.1
[2025-10-12 00:54:48] -rw------- 1 boincer umatlas       357 Oct 12 00:54 output.list
[2025-10-12 00:54:48] -rw-r--r-- 1 boincer umatlas       620 Oct 12 00:54 runtime_log
[2025-10-12 00:54:48] -rw------- 1 boincer umatlas    870400 Oct 12 00:54 result.tar.gz
[2025-10-12 00:54:48] -rw------- 1 boincer umatlas       656 Oct 12 00:54 uV7NDm0twR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmggSMDm7tejXo.diag
[2025-10-12 00:54:48] -rw-r--r-- 1 boincer umatlas      8703 Oct 12 00:54 runtime_log.err
[2025-10-12 00:54:48] -rw-r--r-- 1 boincer umatlas     21873 Oct 12 00:54 stderr.txt
[2025-10-12 00:54:48] HITS file was successfully produced:
[2025-10-12 00:54:48] -rw------- 1 boincer umatlas 193274298 Oct 12 00:53 shared/HITS.pool.root.1
[2025-10-12 00:54:48]  *** Contents of shared directory: ***
[2025-10-12 00:54:48] total 406528
[2025-10-12 00:54:48] -rw-r--r-- 2 boincer umatlas 221537943 Oct 11 23:57 ATLAS.root_0
[2025-10-12 00:54:48] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 23:57 start_atlas.sh
[2025-10-12 00:54:48] -rw-r--r-- 2 boincer umatlas    569676 Oct 11 23:57 input.tar.gz
[2025-10-12 00:54:48] -rw------- 1 boincer umatlas 193274298 Oct 12 00:53 HITS.pool.root.1
[2025-10-12 00:54:48] -rw------- 1 boincer umatlas    870400 Oct 12 00:54 result.tar.gz
00:54:49 (27693): run_atlas exited; CPU time 24239.112044
00:54:49 (27693): called boinc_finish(0)

</stderr_txt>
]]>

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