Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:00:19 (814935): wrapper (7.7.26015): starting
00:00:19 (814935): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 00:00:19] Arguments: --nthreads 12
[2025-10-12 00:00:19] Threads: 12
[2025-10-12 00:00:19] Checking for CVMFS
[2025-10-12 00:00:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 00:00:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 00:00:19] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 00:00:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 00:00:20] 2.13.2.0 5060 5172 123280 151606 1 604 24251413 40960001 23335 16776704 0 16888523 99.843 6421171 35916 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 00:00:20] CVMFS is ok
[2025-10-12 00:00:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 00:00:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 00:00:20] Further information can be found at the LHC@home message board.
[2025-10-12 00:00:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 00:00:20] Checking for apptainer binary...
[2025-10-12 00:00:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 00:00:20] Running /usr/bin/apptainer --version
[2025-10-12 00:00:20] apptainer version 1.4.3-1.el9
[2025-10-12 00:00:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 00:00:21] c-212-3.aglt2.org
[2025-10-12 00:00:21] apptainer works
[2025-10-12 00:00:21] Set ATHENA_PROC_NUMBER=12
[2025-10-12 00:00:21] Set ATHENA_CORE_NUMBER=12
[2025-10-12 00:00:21] Starting ATLAS job with PandaID=6838990057
[2025-10-12 00:00:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 04:28:53]  *** The last 200 lines of the pilot log: ***
[2025-10-12 04:28:53] 2025-10-12 08:28:16,112 | INFO     | intersect: -55891751820.31114
[2025-10-12 04:28:53] 2025-10-12 08:28:16,113 | INFO     | chi2: 5.0697333200764705
[2025-10-12 04:28:53] 2025-10-12 08:28:16,113 | INFO     | current chi2=5.0697333200764705 (change=11.907050798117188 %)
[2025-10-12 04:28:53] 2025-10-12 08:28:16,113 | INFO     | right removable region: 255
[2025-10-12 04:28:53] 2025-10-12 08:28:16,113 | INFO     | sum of square deviations: 5202239218.558594
[2025-10-12 04:28:53] 2025-10-12 08:28:16,115 | INFO     | sum of deviations: 65643378798.64844
[2025-10-12 04:28:53] 2025-10-12 08:28:16,115 | INFO     | mean x: 1760249895.9023438
[2025-10-12 04:28:53] 2025-10-12 08:28:16,115 | INFO     | mean y: 2615660.5859375
[2025-10-12 04:28:53] 2025-10-12 08:28:16,115 | INFO     | -- intersect: -22208733307.140812
[2025-10-12 04:28:53] 2025-10-12 08:28:16,115 | INFO     | intersect: -22208733307.140812
[2025-10-12 04:28:53] 2025-10-12 08:28:16,115 | INFO     | chi2: 2.0096559300119696
[2025-10-12 04:28:53] 2025-10-12 08:28:16,115 | INFO     | current chi2=2.0096559300119696 (change=65.0797178907358 %)
[2025-10-12 04:28:53] 2025-10-12 08:28:16,115 | INFO     | sum of square deviations: 4903299872.733047
[2025-10-12 04:28:53] 2025-10-12 08:28:16,117 | INFO     | sum of deviations: 23805797202.59364
[2025-10-12 04:28:53] 2025-10-12 08:28:16,117 | INFO     | mean x: 1760250048.4103587
[2025-10-12 04:28:53] 2025-10-12 08:28:16,117 | INFO     | mean y: 2636946.848605578
[2025-10-12 04:28:53] 2025-10-12 08:28:16,117 | INFO     | -- intersect: -8543476235.283923
[2025-10-12 04:28:53] 2025-10-12 08:28:16,117 | INFO     | intersect: -8543476235.283923
[2025-10-12 04:28:53] 2025-10-12 08:28:16,118 | INFO     | chi2: 1.129904135486642
[2025-10-12 04:28:53] 2025-10-12 08:28:16,118 | INFO     | current chi2=1.129904135486642 (change=43.77623957351186 %)
[2025-10-12 04:28:53] 2025-10-12 08:28:16,118 | INFO     | sum of square deviations: 4616081096.849573
[2025-10-12 04:28:53] 2025-10-12 08:28:16,119 | INFO     | sum of deviations: -1189538851.199192
[2025-10-12 04:28:53] 2025-10-12 08:28:16,119 | INFO     | mean x: 1760250200.9065042
[2025-10-12 04:28:53] 2025-10-12 08:28:16,119 | INFO     | mean y: 2650198.68699187
[2025-10-12 04:28:53] 2025-10-12 08:28:16,120 | INFO     | -- intersect: 456257047.84709984
[2025-10-12 04:28:53] 2025-10-12 08:28:16,120 | INFO     | intersect: 456257047.84709984
[2025-10-12 04:28:53] 2025-10-12 08:28:16,120 | INFO     | chi2: 0.828203140953185
[2025-10-12 04:28:53] 2025-10-12 08:28:16,120 | INFO     | current chi2=0.828203140953185 (change=26.70146829788497 %)
[2025-10-12 04:28:53] 2025-10-12 08:28:16,120 | INFO     | sum of square deviations: 4340289146.149362
[2025-10-12 04:28:53] 2025-10-12 08:28:16,122 | INFO     | sum of deviations: -13271032867.917015
[2025-10-12 04:28:53] 2025-10-12 08:28:16,122 | INFO     | mean x: 1760250353.406639
[2025-10-12 04:28:53] 2025-10-12 08:28:16,122 | INFO     | mean y: 2656836.44813278
[2025-10-12 04:28:53] 2025-10-12 08:28:16,122 | INFO     | -- intersect: 5384865143.133642
[2025-10-12 04:28:53] 2025-10-12 08:28:16,122 | INFO     | intersect: 5384865143.133642
[2025-10-12 04:28:53] 2025-10-12 08:28:16,122 | INFO     | chi2: 0.7242831574357019
[2025-10-12 04:28:53] 2025-10-12 08:28:16,122 | INFO     | current chi2=0.7242831574357019 (change=12.547644216596526 %)
[2025-10-12 04:28:53] 2025-10-12 08:28:16,122 | INFO     | left removable region: 40
[2025-10-12 04:28:53] 2025-10-12 08:28:16,123 | INFO     | sum of square deviations: 3081580493.0232644
[2025-10-12 04:28:53] 2025-10-12 08:28:16,124 | INFO     | sum of deviations: 729076855.3023262
[2025-10-12 04:28:53] 2025-10-12 08:28:16,124 | INFO     | mean x: 1760250780.4418604
[2025-10-12 04:28:53] 2025-10-12 08:28:16,124 | INFO     | mean y: 2666978.3441860466
[2025-10-12 04:28:53] 2025-10-12 08:28:16,124 | INFO     | -- intersect: -413794024.84997207
[2025-10-12 04:28:53] 2025-10-12 08:28:16,124 | INFO     | intersect: -413794024.84997207
[2025-10-12 04:28:53] 2025-10-12 08:28:16,125 | INFO     | chi2: 0.004313632415929702
[2025-10-12 04:28:53] 2025-10-12 08:28:16,125 | INFO     | -- intersect: -413794024.84997207
[2025-10-12 04:28:53] 2025-10-12 08:28:16,125 | INFO     | current memory leak: 0.24 B/s (using 215 data points, chi2=0.00)
[2025-10-12 04:28:53] 2025-10-12 08:28:16,125 | INFO     | could have reported an average CPU frequency of 2957 MHz (12 samples)
[2025-10-12 04:28:53] 2025-10-12 08:28:16,126 | INFO     | ..............................
[2025-10-12 04:28:53] 2025-10-12 08:28:16,126 | INFO     | . Timing measurements:
[2025-10-12 04:28:53] 2025-10-12 08:28:16,126 | INFO     | . get job = 0 s
[2025-10-12 04:28:53] 2025-10-12 08:28:16,126 | INFO     | . initial setup = 6 s
[2025-10-12 04:28:53] 2025-10-12 08:28:16,126 | INFO     | . payload setup = 42 s
[2025-10-12 04:28:53] 2025-10-12 08:28:16,126 | INFO     | . stage-in = 0 s
[2025-10-12 04:28:53] 2025-10-12 08:28:16,126 | INFO     | . payload execution = 15901 s
[2025-10-12 04:28:53] 2025-10-12 08:28:16,126 | INFO     | . stage-out = 2 s
[2025-10-12 04:28:53] 2025-10-12 08:28:16,126 | INFO     | . log creation = 0 s
[2025-10-12 04:28:53] 2025-10-12 08:28:16,126 | INFO     | ..............................
[2025-10-12 04:28:53] 2025-10-12 08:28:16,140 | INFO     | size of work directory /tmp/boinchome/slots/4/PanDA_Pilot-6838990057: 4927286 B (within 2537553920 B limit)
[2025-10-12 04:28:53] 2025-10-12 08:28:16,142 | INFO     | pfn file=/tmp/boinchome/slots/4/PanDA_Pilot-6838990057/HITS.46676269._065778.pool.root.1 does not exist (skip from workdir size calculation)
[2025-10-12 04:28:53] 2025-10-12 08:28:16,142 | INFO     | total size of present files: 0 B (workdir size: 4927286 B)
[2025-10-12 04:28:53] 2025-10-12 08:28:16,143 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/4/PanDA_Pilot-6838990057/HITS.46676269._065778.pool.root.1 since it does not exist
[2025-10-12 04:28:53] 2025-10-12 08:28:16,606 | INFO     | number of running child processes to parent process 842120: 1
[2025-10-12 04:28:53] 2025-10-12 08:28:16,607 | INFO     | maximum number of monitored processes: 6
[2025-10-12 04:28:53] 2025-10-12 08:28:16,607 | INFO     | aborting job monitoring since job object (job id=6838990057) has expired
[2025-10-12 04:28:53] 2025-10-12 08:28:16,642 | INFO     | 
[2025-10-12 04:28:53] 2025-10-12 08:28:16,643 | INFO     | job summary report
[2025-10-12 04:28:53] 2025-10-12 08:28:16,643 | INFO     | --------------------------------------------------
[2025-10-12 04:28:53] 2025-10-12 08:28:16,643 | INFO     | PanDA job id: 6838990057
[2025-10-12 04:28:53] 2025-10-12 08:28:16,643 | INFO     | task id: 46676269
[2025-10-12 04:28:53] 2025-10-12 08:28:16,643 | INFO     | errors: (none)
[2025-10-12 04:28:53] 2025-10-12 08:28:16,643 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 04:28:53] 2025-10-12 08:28:16,643 | INFO     | pilot state: finished 
[2025-10-12 04:28:53] 2025-10-12 08:28:16,643 | INFO     | transexitcode: 0
[2025-10-12 04:28:53] 2025-10-12 08:28:16,643 | INFO     | exeerrorcode: 0
[2025-10-12 04:28:53] 2025-10-12 08:28:16,643 | INFO     | exeerrordiag: 
[2025-10-12 04:28:53] 2025-10-12 08:28:16,644 | INFO     | exitcode: 0
[2025-10-12 04:28:53] 2025-10-12 08:28:16,644 | INFO     | exitmsg: OK
[2025-10-12 04:28:53] 2025-10-12 08:28:16,644 | INFO     | cpuconsumptiontime: 39134 s
[2025-10-12 04:28:53] 2025-10-12 08:28:16,644 | INFO     | nevents: 400
[2025-10-12 04:28:53] 2025-10-12 08:28:16,644 | INFO     | neventsw: 0
[2025-10-12 04:28:53] 2025-10-12 08:28:16,644 | INFO     | pid: 842120
[2025-10-12 04:28:53] 2025-10-12 08:28:16,644 | INFO     | pgrp: 842120
[2025-10-12 04:28:53] 2025-10-12 08:28:16,644 | INFO     | corecount: 12
[2025-10-12 04:28:53] 2025-10-12 08:28:16,644 | INFO     | event service: False
[2025-10-12 04:28:53] 2025-10-12 08:28:16,644 | INFO     | sizes: {0: 2348029, 1: 2348885, 12: 2348885, 23: 2348913, 30: 2349203, 34: 2349231, 15948: 2380715, 15950: 2389713, 15951: 2389769, 15957: 2389991}
[2025-10-12 04:28:53] 2025-10-12 08:28:16,644 | INFO     | --------------------------------------------------
[2025-10-12 04:28:53] 2025-10-12 08:28:16,644 | INFO     | 
[2025-10-12 04:28:53] 2025-10-12 08:28:16,645 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-10-12 04:28:53] 2025-10-12 08:28:16,745 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 04:28:53] 2025-10-12 08:28:16,745 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 04:28:53] 2025-10-12 08:28:16,746 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 04:28:53] 2025-10-12 08:28:16,746 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 04:28:53] 2025-10-12 08:28:16,746 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 04:28:53] 2025-10-12 08:28:16,746 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 04:28:53] 2025-10-12 08:28:16,746 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 04:28:53] 2025-10-12 08:28:16,746 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 04:28:53] 2025-10-12 08:28:16,746 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 04:28:53] 2025-10-12 08:28:16,746 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 04:28:53] 2025-10-12 08:28:16,746 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 04:28:53] 2025-10-12 08:28:16,746 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 04:28:53] 2025-10-12 08:28:16,747 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 04:28:53] 2025-10-12 08:28:16,747 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 04:28:53] 2025-10-12 08:28:16,747 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 04:28:53] 2025-10-12 08:28:16,747 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 04:28:53] 2025-10-12 08:28:16,747 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 04:28:53] 2025-10-12 08:28:16,747 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 04:28:53] 2025-10-12 08:28:16,747 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 04:28:53] 2025-10-12 08:28:16,747 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 04:28:53] 2025-10-12 08:28:16,747 | INFO     | job 6838990057 has completed (purged errors)
[2025-10-12 04:28:53] 2025-10-12 08:28:16,748 | INFO     | overall cleanup function is called
[2025-10-12 04:28:53] 2025-10-12 08:28:17,810 | INFO     | --- collectZombieJob: --- 10, [842120]
[2025-10-12 04:28:53] 2025-10-12 08:28:17,811 | INFO     | zombie collector waiting for pid 842120
[2025-10-12 04:28:53] 2025-10-12 08:28:17,811 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 04:28:53] 2025-10-12 08:28:17,811 | INFO     | collected zombie processes
[2025-10-12 04:28:53] 2025-10-12 08:28:17,811 | INFO     | will attempt to kill all subprocesses of pid=842120
[2025-10-12 04:28:53] 2025-10-12 08:28:18,384 | INFO     | process IDs to be killed: [842120] (in reverse order)
[2025-10-12 04:28:53] 2025-10-12 08:28:18,594 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 04:28:53] 2025-10-12 08:28:18,595 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 04:28:53] 2025-10-12 08:28:18,612 | INFO     | did not find any defunct processes belonging to 842120
[2025-10-12 04:28:53] 2025-10-12 08:28:18,628 | INFO     | did not find any defunct processes belonging to 842120
[2025-10-12 04:28:53] 2025-10-12 08:28:18,628 | INFO     | ready for new job
[2025-10-12 04:28:53] 2025-10-12 08:28:18,628 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 04:28:53] 2025-10-12 08:28:18,632 | INFO     | ***************************************
[2025-10-12 04:28:53] 2025-10-12 08:28:18,632 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 04:28:53] 2025-10-12 08:28:18,632 | INFO     | ***************************************
[2025-10-12 04:28:53] 2025-10-12 08:28:18,632 | INFO     | 
[2025-10-12 04:28:53] 2025-10-12 08:28:18,669 | INFO     | architecture information:
[2025-10-12 04:28:53] 2025-10-12 08:28:18,685 | INFO     | executing command: cat /etc/os-release
[2025-10-12 04:28:53] 2025-10-12 08:28:18,743 | INFO     | cat /etc/os-release:
[2025-10-12 04:28:53] NAME="CentOS Linux"
[2025-10-12 04:28:53] VERSION="7 (Core)"
[2025-10-12 04:28:53] ID="centos"
[2025-10-12 04:28:53] ID_LIKE="rhel fedora"
[2025-10-12 04:28:53] VERSION_ID="7"
[2025-10-12 04:28:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 04:28:53] ANSI_COLOR="0;31"
[2025-10-12 04:28:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 04:28:53] HOME_URL="https://www.centos.org/"
[2025-10-12 04:28:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 04:28:53] 
[2025-10-12 04:28:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 04:28:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 04:28:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 04:28:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 04:28:53] 
[2025-10-12 04:28:53] 2025-10-12 08:28:18,744 | INFO     | ***************************************
[2025-10-12 04:28:53] 2025-10-12 08:28:19,247 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-10-12 04:28:53] 2025-10-12 08:28:19,300 | INFO     | sufficient remaining disk space (127528861696 B)
[2025-10-12 04:28:53] 2025-10-12 08:28:19,300 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 04:28:53] 2025-10-12 08:28:19,300 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 04:28:53] 2025-10-12 08:28:19,301 | INFO     | update_server=False
[2025-10-12 04:28:53] 2025-10-12 08:28:19,301 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 04:28:53] 2025-10-12 08:28:19,589 | INFO     | all payload control threads have been joined
[2025-10-12 04:28:53] 2025-10-12 08:28:19,898 | INFO     | all data control threads have been joined
[2025-10-12 04:28:53] 2025-10-12 08:28:20,049 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 04:28:53] 2025-10-12 08:28:20,115 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 04:28:53] 2025-10-12 08:28:20,116 | INFO     | aborting loop
[2025-10-12 04:28:53] 2025-10-12 08:28:20,130 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 04:28:53] 2025-10-12 08:28:20,306 | INFO     | [job] retrieve thread has finished
[2025-10-12 04:28:53] 2025-10-12 08:28:20,517 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 04:28:53] 2025-10-12 08:28:20,595 | INFO     | [payload] control thread has finished
[2025-10-12 04:28:53] 2025-10-12 08:28:20,867 | INFO     | all job control threads have been joined
[2025-10-12 04:28:53] 2025-10-12 08:28:20,904 | INFO     | [data] control thread has finished
[2025-10-12 04:28:53] 2025-10-12 08:28:21,035 | INFO     | [payload] failed_post thread has finished
[2025-10-12 04:28:53] 2025-10-12 08:28:21,036 | INFO     | [payload] validate_post thread has finished
[2025-10-12 04:28:53] 2025-10-12 08:28:21,130 | INFO     | [job] job monitor thread has finished
[2025-10-12 04:28:53] 2025-10-12 08:28:21,131 | INFO     | [data] copytool_in thread has finished
[2025-10-12 04:28:53] 2025-10-12 08:28:21,185 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 04:28:53] 2025-10-12 08:28:21,240 | INFO     | [job] validate thread has finished
[2025-10-12 04:28:53] 2025-10-12 08:28:21,246 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 04:28:53] 2025-10-12 08:28:21,731 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 04:28:53] 2025-10-12 08:28:21,873 | INFO     | [job] control thread has finished
[2025-10-12 04:28:53] 2025-10-12 08:28:22,069 | INFO     | [data] copytool_out thread has finished
[2025-10-12 04:28:53] 2025-10-12 08:28:22,252 | INFO     | [job] queue monitor thread has finished
[2025-10-12 04:28:53] 2025-10-12 08:28:24,138 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 04:28:53] 2025-10-12 08:28:30,198 | INFO     | job.realtimelogging is not enabled
[2025-10-12 04:28:53] 2025-10-12 08:28:31,204 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 04:28:53] 2025-10-12 08:28:46,591 | INFO     | [monitor] cgroup control has ended
[2025-10-12 04:28:53] 2025-10-12 08:28:48,374 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140510551136064)>', '<ExcThread(monitor, started 140509771192064)>']
[2025-10-12 04:28:53] 2025-10-12 08:28:48,925 | INFO     | PID=819488 has CPU usage=6.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 04:28:53] 2025-10-12 08:28:48,925 | INFO     | .. there are 22 such processes running
[2025-10-12 04:28:53] 2025-10-12 08:28:48,927 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 04:28:53] 2025-10-12 08:28:48,927 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 04:28:53] 2025-10-12 08:28:48,927 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 04:28:53] 2025-10-12 08:28:48,927 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 04:28:53] 2025-10-12 08:28:48,927 | INFO     | [monitor] control thread has ended
[2025-10-12 04:28:53] 2025-10-12 08:28:53,399 | INFO     | all workflow threads have been joined
[2025-10-12 04:28:53] 2025-10-12 08:28:53,400 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 04:28:53] 2025-10-12 08:28:53,400 | INFO     | traces error code: 0
[2025-10-12 04:28:53] 2025-10-12 08:28:53,400 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 04:28:53] 2025-10-12 08:28:53,668 [wrapper] ==== pilot stdout END ====
[2025-10-12 04:28:53] 2025-10-12 08:28:53,671 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 04:28:53] 2025-10-12 08:28:53,676 [wrapper] pilotpid: 819488
[2025-10-12 04:28:53] 2025-10-12 08:28:53,679 [wrapper] Pilot exit status: 0
[2025-10-12 04:28:53] 2025-10-12 08:28:53,699 [wrapper] pandaids: 6838990057
[2025-10-12 04:28:53] 2025-10-12 08:28:53,795 [wrapper] cleanup supervisor_pilot 1644896 819489
[2025-10-12 04:28:53] 2025-10-12 08:28:53,803 [wrapper] Test setup, not cleaning
[2025-10-12 04:28:53] 2025-10-12 08:28:53,807 [wrapper] apfmon messages muted
[2025-10-12 04:28:53] 2025-10-12 08:28:53,815 [wrapper] ==== wrapper stdout END ====
[2025-10-12 04:28:53] 2025-10-12 08:28:53,823 [wrapper] ==== wrapper stderr END ====
[2025-10-12 04:28:53]  *** Error codes and diagnostics ***
[2025-10-12 04:28:53]     "exeErrorCode": 0,
[2025-10-12 04:28:53]     "exeErrorDiag": "",
[2025-10-12 04:28:53]     "pilotErrorCode": 0,
[2025-10-12 04:28:53]     "pilotErrorDiag": "",
[2025-10-12 04:28:53]  *** Listing of results directory ***
[2025-10-12 04:28:53] total 412812
[2025-10-12 04:28:53] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 17:39 pilot3.tar.gz
[2025-10-12 04:28:53] -rwx------. 1 boincer umatlas     36292 Oct 11 18:03 runpilot2-wrapper.sh
[2025-10-12 04:28:53] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 18:03 queuedata.json
[2025-10-12 04:28:53] -rw-r--r--. 1 boincer umatlas       100 Oct 12 00:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 04:28:53] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 00:00 run_atlas
[2025-10-12 04:28:53] -rw-r--r--. 1 boincer umatlas       105 Oct 12 00:00 job.xml
[2025-10-12 04:28:53] -rw-r--r--. 2 boincer umatlas 218654827 Oct 12 00:00 EVNT.46676267._002642.pool.root.1
[2025-10-12 04:28:53] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:00 start_atlas.sh
[2025-10-12 04:28:53] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 00:00 shared
[2025-10-12 04:28:53] -rw-r--r--. 2 boincer umatlas    569676 Oct 12 00:00 input.tar.gz
[2025-10-12 04:28:53] -rw-r--r--. 1 boincer umatlas         0 Oct 12 00:00 boinc_lockfile
[2025-10-12 04:28:53] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 00:00 pandaJob.out
[2025-10-12 04:28:53] -rw-------. 1 boincer umatlas    975512 Oct 12 00:01 agis_schedconf.cvmfs.json
[2025-10-12 04:28:53] drwx------. 5 boincer umatlas      4096 Oct 12 00:01 pilot3
[2025-10-12 04:28:53] -rw-r--r--. 1 boincer umatlas      6946 Oct 12 04:22 init_data.xml
[2025-10-12 04:28:53] -rw-------. 1 boincer umatlas 194838568 Oct 12 04:27 HITS.46676269._065778.pool.root.1
[2025-10-12 04:28:53] -rw-r--r--. 1 boincer umatlas       531 Oct 12 04:27 boinc_task_state.xml
[2025-10-12 04:28:53] -rw-------. 1 boincer umatlas      1036 Oct 12 04:28 memory_monitor_summary.json
[2025-10-12 04:28:53] -rw-------. 1 boincer umatlas   1560580 Oct 12 04:28 agis_ddmendpoints.agis.ALL.json
[2025-10-12 04:28:53] -rw-------. 1 boincer umatlas    552369 Oct 12 04:28 log.46676269._065778.job.log.tgz.1
[2025-10-12 04:28:53] -rw-------. 1 boincer umatlas      7781 Oct 12 04:28 heartbeat.json
[2025-10-12 04:28:53] -rw-------. 1 boincer umatlas        95 Oct 12 04:28 pilot_heartbeat.json
[2025-10-12 04:28:53] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 04:28 boinc_mmap_file
[2025-10-12 04:28:53] -rw-r--r--. 1 boincer umatlas        28 Oct 12 04:28 wrapper_checkpoint.txt
[2025-10-12 04:28:53] -rw-------. 1 boincer umatlas      4896 Oct 12 04:28 pilotlog.txt
[2025-10-12 04:28:53] -rw-------. 1 boincer umatlas   2106580 Oct 12 04:28 log.46676269._065778.job.log.1
[2025-10-12 04:28:53] -rw-------. 1 boincer umatlas       357 Oct 12 04:28 output.list
[2025-10-12 04:28:53] -rw-r--r--. 1 boincer umatlas       620 Oct 12 04:28 runtime_log
[2025-10-12 04:28:53] -rw-------. 1 boincer umatlas   2682880 Oct 12 04:28 result.tar.gz
[2025-10-12 04:28:53] -rw-------. 1 boincer umatlas       655 Oct 12 04:28 SUAODm3rwR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmRgSMDmZaZ5mm.diag
[2025-10-12 04:28:53] -rw-r--r--. 1 boincer umatlas      8701 Oct 12 04:28 runtime_log.err
[2025-10-12 04:28:53] -rw-r--r--. 1 boincer umatlas     21408 Oct 12 04:28 stderr.txt
[2025-10-12 04:28:54] HITS file was successfully produced:
[2025-10-12 04:28:54] -rw-------. 1 boincer umatlas 194838568 Oct 12 04:27 shared/HITS.pool.root.1
[2025-10-12 04:28:54]  *** Contents of shared directory: ***
[2025-10-12 04:28:54] total 407008
[2025-10-12 04:28:54] -rw-r--r--. 2 boincer umatlas 218654827 Oct 12 00:00 ATLAS.root_0
[2025-10-12 04:28:54] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:00 start_atlas.sh
[2025-10-12 04:28:54] -rw-r--r--. 2 boincer umatlas    569676 Oct 12 00:00 input.tar.gz
[2025-10-12 04:28:54] -rw-------. 1 boincer umatlas 194838568 Oct 12 04:27 HITS.pool.root.1
[2025-10-12 04:28:54] -rw-------. 1 boincer umatlas   2682880 Oct 12 04:28 result.tar.gz
04:28:55 (814935): run_atlas exited; CPU time 39656.695190
04:28:55 (814935): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN