Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:38:22 (3550111): wrapper (7.7.26015): starting
23:38:22 (3550111): wrapper: running run_atlas (--nthreads 10)
[2025-10-11 23:38:22] Arguments: --nthreads 10
[2025-10-11 23:38:22] Threads: 10
[2025-10-11 23:38:22] Checking for CVMFS
[2025-10-11 23:38:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 23:38:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 23:38:23] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 23:38:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 23:38:23] 2.13.2.0 7513 77051 126112 151606 3 621 23674698 40960000 32683 16776704 0 461280288 99.755 289454373 46108 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 23:38:23] CVMFS is ok
[2025-10-11 23:38:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 23:38:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 23:38:23] Further information can be found at the LHC@home message board.
[2025-10-11 23:38:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 23:38:23] Checking for apptainer binary...
[2025-10-11 23:38:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 23:38:23] Running /usr/bin/apptainer --version
[2025-10-11 23:38:24] apptainer version 1.4.3-1.el9
[2025-10-11 23:38:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 23:38:24] c-208-40.aglt2.org
[2025-10-11 23:38:24] apptainer works
[2025-10-11 23:38:24] Set ATHENA_PROC_NUMBER=10
[2025-10-11 23:38:24] Set ATHENA_CORE_NUMBER=10
[2025-10-11 23:38:24] Starting ATLAS job with PandaID=6838603249
[2025-10-11 23:38:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 01:54:14]  *** The last 200 lines of the pilot log: ***
[2025-10-12 01:54:14] 2025-10-12 05:53:11,041 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 01:54:14] 2025-10-12 05:53:11,041 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 01:54:14] 2025-10-12 05:53:11,054 | INFO     | fitting pss+swap vs Time
[2025-10-12 01:54:14] 2025-10-12 05:53:11,057 | INFO     | sum of square deviations: 697166383.8473266
[2025-10-12 01:54:14] 2025-10-12 05:53:11,060 | INFO     | sum of deviations: 13081992212.389305
[2025-10-12 01:54:14] 2025-10-12 05:53:11,060 | INFO     | mean x: 1760244351.351145
[2025-10-12 01:54:14] 2025-10-12 05:53:11,060 | INFO     | mean y: 2525742.4045801526
[2025-10-12 01:54:14] 2025-10-12 05:53:11,061 | INFO     | -- intersect: -33027613733.340378
[2025-10-12 01:54:14] 2025-10-12 05:53:11,061 | INFO     | intersect: -33027613733.340378
[2025-10-12 01:54:14] 2025-10-12 05:53:11,061 | INFO     | chi2: 2.038660654518185
[2025-10-12 01:54:14] 2025-10-12 05:53:11,061 | INFO     | sum of square deviations: 620330560.1587305
[2025-10-12 01:54:14] 2025-10-12 05:53:11,061 | INFO     | sum of deviations: 20839610232.460308
[2025-10-12 01:54:14] 2025-10-12 05:53:11,061 | INFO     | mean x: 1760244198.8253968
[2025-10-12 01:54:14] 2025-10-12 05:53:11,061 | INFO     | mean y: 2540625.793650794
[2025-10-12 01:54:14] 2025-10-12 05:53:11,061 | INFO     | -- intersect: -59131742566.83872
[2025-10-12 01:54:14] 2025-10-12 05:53:11,061 | INFO     | intersect: -59131742566.83872
[2025-10-12 01:54:14] 2025-10-12 05:53:11,061 | INFO     | chi2: 1.3351358939008828
[2025-10-12 01:54:14] 2025-10-12 05:53:11,062 | INFO     | current chi2=1.3351358939008828 (change=34.50916458598023 %)
[2025-10-12 01:54:14] 2025-10-12 05:53:11,072 | INFO     | sum of square deviations: 549369226.066117
[2025-10-12 01:54:14] 2025-10-12 05:53:11,074 | INFO     | sum of deviations: 19965103986.75206
[2025-10-12 01:54:14] 2025-10-12 05:53:11,077 | INFO     | mean x: 1760244046.3140495
[2025-10-12 01:54:14] 2025-10-12 05:53:11,077 | INFO     | mean y: 2538745.3223140496
[2025-10-12 01:54:14] 2025-10-12 05:53:11,077 | INFO     | -- intersect: -63968018321.322815
[2025-10-12 01:54:14] 2025-10-12 05:53:11,079 | INFO     | intersect: -63968018321.322815
[2025-10-12 01:54:14] 2025-10-12 05:53:11,079 | INFO     | chi2: 1.3356557522895511
[2025-10-12 01:54:14] 2025-10-12 05:53:11,079 | INFO     | current chi2=1.3356557522895511 (change=-0.03893673977631051 %)
[2025-10-12 01:54:14] 2025-10-12 05:53:11,081 | INFO     | right removable region: 120
[2025-10-12 01:54:14] 2025-10-12 05:53:11,081 | INFO     | sum of square deviations: 620341610.7063484
[2025-10-12 01:54:14] 2025-10-12 05:53:11,085 | INFO     | sum of deviations: -6268892056.547619
[2025-10-12 01:54:14] 2025-10-12 05:53:11,087 | INFO     | mean x: 1760244503.8650794
[2025-10-12 01:54:14] 2025-10-12 05:53:11,087 | INFO     | mean y: 2563641.261904762
[2025-10-12 01:54:14] 2025-10-12 05:53:11,087 | INFO     | -- intersect: 17790799344.645897
[2025-10-12 01:54:14] 2025-10-12 05:53:11,087 | INFO     | intersect: 17790799344.645897
[2025-10-12 01:54:14] 2025-10-12 05:53:11,091 | INFO     | chi2: 0.7978613468349551
[2025-10-12 01:54:14] 2025-10-12 05:53:11,091 | INFO     | current chi2=0.7978613468349551 (change=60.86345488315117 %)
[2025-10-12 01:54:14] 2025-10-12 05:53:11,091 | INFO     | sum of square deviations: 549384854.264462
[2025-10-12 01:54:14] 2025-10-12 05:53:11,094 | INFO     | sum of deviations: -10469323773.115702
[2025-10-12 01:54:14] 2025-10-12 05:53:11,096 | INFO     | mean x: 1760244656.3719008
[2025-10-12 01:54:14] 2025-10-12 05:53:11,096 | INFO     | mean y: 2572521.0247933883
[2025-10-12 01:54:14] 2025-10-12 05:53:11,096 | INFO     | -- intersect: 33546582852.59302
[2025-10-12 01:54:14] 2025-10-12 05:53:11,097 | INFO     | intersect: 33546582852.59302
[2025-10-12 01:54:14] 2025-10-12 05:53:11,099 | INFO     | chi2: 0.7286373968894324
[2025-10-12 01:54:14] 2025-10-12 05:53:11,099 | INFO     | current chi2=0.7286373968894324 (change=8.676187939186171 %)
[2025-10-12 01:54:14] 2025-10-12 05:53:11,099 | INFO     | left removable region: 20
[2025-10-12 01:54:14] 2025-10-12 05:53:11,100 | INFO     | sum of square deviations: 310090867.3100001
[2025-10-12 01:54:14] 2025-10-12 05:53:11,102 | INFO     | sum of deviations: -888534487.0899998
[2025-10-12 01:54:14] 2025-10-12 05:53:11,102 | INFO     | mean x: 1760244625.87
[2025-10-12 01:54:14] 2025-10-12 05:53:11,102 | INFO     | mean y: 2586650.07
[2025-10-12 01:54:14] 2025-10-12 05:53:11,105 | INFO     | -- intersect: 5046392258.948989
[2025-10-12 01:54:14] 2025-10-12 05:53:11,105 | INFO     | intersect: 5046392258.948989
[2025-10-12 01:54:14] 2025-10-12 05:53:11,105 | INFO     | chi2: 0.002989857406327867
[2025-10-12 01:54:14] 2025-10-12 05:53:11,105 | INFO     | -- intersect: 5046392258.948989
[2025-10-12 01:54:14] 2025-10-12 05:53:11,108 | INFO     | current memory leak: -2.87 B/s (using 100 data points, chi2=0.00)
[2025-10-12 01:54:14] 2025-10-12 05:53:11,111 | INFO     | could have reported an average CPU frequency of 3789 MHz (8 samples)
[2025-10-12 01:54:14] 2025-10-12 05:53:11,111 | INFO     | ..............................
[2025-10-12 01:54:14] 2025-10-12 05:53:11,111 | INFO     | . Timing measurements:
[2025-10-12 01:54:14] 2025-10-12 05:53:11,113 | INFO     | . get job = 0 s
[2025-10-12 01:54:14] 2025-10-12 05:53:11,113 | INFO     | . initial setup = 2 s
[2025-10-12 01:54:14] 2025-10-12 05:53:11,114 | INFO     | . payload setup = 19 s
[2025-10-12 01:54:14] 2025-10-12 05:53:11,114 | INFO     | . stage-in = 0 s
[2025-10-12 01:54:14] 2025-10-12 05:53:11,114 | INFO     | . payload execution = 7963 s
[2025-10-12 01:54:14] 2025-10-12 05:53:11,114 | INFO     | . stage-out = 5 s
[2025-10-12 01:54:14] 2025-10-12 05:53:11,114 | INFO     | . log creation = 1 s
[2025-10-12 01:54:14] 2025-10-12 05:53:11,114 | INFO     | ..............................
[2025-10-12 01:54:14] 2025-10-12 05:53:11,508 | INFO     | 
[2025-10-12 01:54:14] 2025-10-12 05:53:11,508 | INFO     | job summary report
[2025-10-12 01:54:14] 2025-10-12 05:53:11,508 | INFO     | --------------------------------------------------
[2025-10-12 01:54:14] 2025-10-12 05:53:11,508 | INFO     | PanDA job id: 6838603249
[2025-10-12 01:54:14] 2025-10-12 05:53:11,508 | INFO     | task id: 46676269
[2025-10-12 01:54:14] 2025-10-12 05:53:11,509 | INFO     | errors: (none)
[2025-10-12 01:54:14] 2025-10-12 05:53:11,509 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 01:54:14] 2025-10-12 05:53:11,509 | INFO     | pilot state: finished 
[2025-10-12 01:54:14] 2025-10-12 05:53:11,509 | INFO     | transexitcode: 0
[2025-10-12 01:54:14] 2025-10-12 05:53:11,509 | INFO     | exeerrorcode: 0
[2025-10-12 01:54:14] 2025-10-12 05:53:11,509 | INFO     | exeerrordiag: 
[2025-10-12 01:54:14] 2025-10-12 05:53:11,509 | INFO     | exitcode: 0
[2025-10-12 01:54:14] 2025-10-12 05:53:11,509 | INFO     | exitmsg: OK
[2025-10-12 01:54:14] 2025-10-12 05:53:11,509 | INFO     | cpuconsumptiontime: 24148 s
[2025-10-12 01:54:14] 2025-10-12 05:53:11,509 | INFO     | nevents: 400
[2025-10-12 01:54:14] 2025-10-12 05:53:11,509 | INFO     | neventsw: 0
[2025-10-12 01:54:14] 2025-10-12 05:53:11,509 | INFO     | pid: 3578362
[2025-10-12 01:54:14] 2025-10-12 05:53:11,509 | INFO     | pgrp: 3578362
[2025-10-12 01:54:14] 2025-10-12 05:53:11,509 | INFO     | corecount: 10
[2025-10-12 01:54:14] 2025-10-12 05:53:11,509 | INFO     | event service: False
[2025-10-12 01:54:14] 2025-10-12 05:53:11,509 | INFO     | sizes: {0: 2348857, 9: 2349119, 11: 2349147, 7987: 2376833, 7988: 2376832, 7994: 2385886, 7995: 2386070, 8035: 2386264}
[2025-10-12 01:54:14] 2025-10-12 05:53:11,509 | INFO     | --------------------------------------------------
[2025-10-12 01:54:14] 2025-10-12 05:53:11,509 | INFO     | 
[2025-10-12 01:54:14] 2025-10-12 05:53:11,509 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-10-12 01:54:14] 2025-10-12 05:53:11,605 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 01:54:14] 2025-10-12 05:53:11,605 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 01:54:14] 2025-10-12 05:53:11,605 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 01:54:14] 2025-10-12 05:53:11,605 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 01:54:14] 2025-10-12 05:53:11,605 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 01:54:14] 2025-10-12 05:53:11,606 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 01:54:14] 2025-10-12 05:53:11,606 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 01:54:14] 2025-10-12 05:53:11,606 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 01:54:14] 2025-10-12 05:53:11,606 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 01:54:14] 2025-10-12 05:53:11,606 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 01:54:14] 2025-10-12 05:53:11,606 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 01:54:14] 2025-10-12 05:53:11,606 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 01:54:14] 2025-10-12 05:53:11,606 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 01:54:14] 2025-10-12 05:53:11,606 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 01:54:14] 2025-10-12 05:53:11,606 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 01:54:14] 2025-10-12 05:53:11,606 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 01:54:14] 2025-10-12 05:53:11,606 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 01:54:14] 2025-10-12 05:53:11,606 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 01:54:14] 2025-10-12 05:53:11,606 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 01:54:14] 2025-10-12 05:53:11,606 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 01:54:14] 2025-10-12 05:53:11,606 | INFO     | job 6838603249 has completed (purged errors)
[2025-10-12 01:54:14] 2025-10-12 05:53:11,606 | INFO     | overall cleanup function is called
[2025-10-12 01:54:14] 2025-10-12 05:53:12,614 | INFO     | --- collectZombieJob: --- 10, [3578362]
[2025-10-12 01:54:14] 2025-10-12 05:53:12,614 | INFO     | zombie collector waiting for pid 3578362
[2025-10-12 01:54:14] 2025-10-12 05:53:12,614 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 01:54:14] 2025-10-12 05:53:12,614 | INFO     | collected zombie processes
[2025-10-12 01:54:14] 2025-10-12 05:53:12,614 | INFO     | will attempt to kill all subprocesses of pid=3578362
[2025-10-12 01:54:14] 2025-10-12 05:53:14,733 | INFO     | process IDs to be killed: [3578362] (in reverse order)
[2025-10-12 01:54:14] 2025-10-12 05:53:14,996 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 01:54:14] 2025-10-12 05:53:14,996 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 01:54:14] 2025-10-12 05:53:15,095 | INFO     | did not find any defunct processes belonging to 3578362
[2025-10-12 01:54:14] 2025-10-12 05:53:15,184 | INFO     | did not find any defunct processes belonging to 3578362
[2025-10-12 01:54:14] 2025-10-12 05:53:15,184 | INFO     | ready for new job
[2025-10-12 01:54:14] 2025-10-12 05:53:15,184 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 01:54:14] 2025-10-12 05:53:15,197 | INFO     | ***************************************
[2025-10-12 01:54:14] 2025-10-12 05:53:15,198 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 01:54:14] 2025-10-12 05:53:15,198 | INFO     | ***************************************
[2025-10-12 01:54:14] 2025-10-12 05:53:15,198 | INFO     | 
[2025-10-12 01:54:14] 2025-10-12 05:53:15,214 | INFO     | architecture information:
[2025-10-12 01:54:14] 2025-10-12 05:53:15,222 | INFO     | executing command: cat /etc/os-release
[2025-10-12 01:54:14] 2025-10-12 05:53:15,372 | INFO     | cat /etc/os-release:
[2025-10-12 01:54:14] NAME="CentOS Linux"
[2025-10-12 01:54:14] VERSION="7 (Core)"
[2025-10-12 01:54:14] ID="centos"
[2025-10-12 01:54:14] ID_LIKE="rhel fedora"
[2025-10-12 01:54:14] VERSION_ID="7"
[2025-10-12 01:54:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 01:54:14] ANSI_COLOR="0;31"
[2025-10-12 01:54:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 01:54:14] HOME_URL="https://www.centos.org/"
[2025-10-12 01:54:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 01:54:14] 
[2025-10-12 01:54:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 01:54:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 01:54:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 01:54:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 01:54:14] 
[2025-10-12 01:54:14] 2025-10-12 05:53:15,372 | INFO     | ***************************************
[2025-10-12 01:54:14] 2025-10-12 05:53:15,876 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-10-12 01:54:14] 2025-10-12 05:53:15,928 | INFO     | sufficient remaining disk space (165683396608 B)
[2025-10-12 01:54:14] 2025-10-12 05:53:15,928 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 01:54:14] 2025-10-12 05:53:15,928 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 01:54:14] 2025-10-12 05:53:15,928 | INFO     | update_server=False
[2025-10-12 01:54:14] 2025-10-12 05:53:15,928 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 01:54:14] 2025-10-12 05:53:15,974 | INFO     | all payload control threads have been joined
[2025-10-12 01:54:14] 2025-10-12 05:53:16,339 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 01:54:14] 2025-10-12 05:53:16,339 | INFO     | aborting loop
[2025-10-12 01:54:14] 2025-10-12 05:53:16,539 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 01:54:14] 2025-10-12 05:53:16,934 | INFO     | [job] retrieve thread has finished
[2025-10-12 01:54:14] 2025-10-12 05:53:16,980 | INFO     | [payload] control thread has finished
[2025-10-12 01:54:14] 2025-10-12 05:53:16,999 | INFO     | all data control threads have been joined
[2025-10-12 01:54:14] 2025-10-12 05:53:17,024 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 01:54:14] 2025-10-12 05:53:17,029 | INFO     | all job control threads have been joined
[2025-10-12 01:54:14] 2025-10-12 05:53:17,238 | INFO     | [job] validate thread has finished
[2025-10-12 01:54:14] 2025-10-12 05:53:17,246 | INFO     | [data] copytool_in thread has finished
[2025-10-12 01:54:14] 2025-10-12 05:53:17,246 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 01:54:14] 2025-10-12 05:53:17,344 | INFO     | [job] job monitor thread has finished
[2025-10-12 01:54:14] 2025-10-12 05:53:17,544 | INFO     | [job] queue monitor thread has finished
[2025-10-12 01:54:14] 2025-10-12 05:53:17,556 | INFO     | [payload] validate_post thread has finished
[2025-10-12 01:54:14] 2025-10-12 05:53:18,005 | INFO     | [data] control thread has finished
[2025-10-12 01:54:14] 2025-10-12 05:53:18,017 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 01:54:14] 2025-10-12 05:53:18,035 | INFO     | [job] control thread has finished
[2025-10-12 01:54:14] 2025-10-12 05:53:18,035 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 01:54:14] 2025-10-12 05:53:18,036 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 01:54:14] 2025-10-12 05:53:18,349 | INFO     | [payload] failed_post thread has finished
[2025-10-12 01:54:14] 2025-10-12 05:53:18,932 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 01:54:14] 2025-10-12 05:53:19,031 | INFO     | [data] copytool_out thread has finished
[2025-10-12 01:54:14] 2025-10-12 05:53:22,941 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 01:54:14] 2025-10-12 05:53:45,621 | INFO     | PID=3557587 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 01:54:14] 2025-10-12 05:53:45,621 | INFO     | .. there are 41 such processes running
[2025-10-12 01:54:14] 2025-10-12 05:53:45,626 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 01:54:14] 2025-10-12 05:53:45,626 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 01:54:14] 2025-10-12 05:53:45,626 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 01:54:14] 2025-10-12 05:53:50,388 [wrapper] supervise_pilot (15 min periods counter: 10)
[2025-10-12 01:54:14] 2025-10-12 05:54:06,989 | INFO     | [monitor] cgroup control has ended
[2025-10-12 01:54:14] 2025-10-12 05:54:07,415 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140673947002688)>', '<ExcThread(monitor, started 140673323886336)>']
[2025-10-12 01:54:14] 2025-10-12 05:54:07,789 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 01:54:14] 2025-10-12 05:54:07,789 | INFO     | [monitor] control thread has ended
[2025-10-12 01:54:14] 2025-10-12 05:54:12,441 | INFO     | all workflow threads have been joined
[2025-10-12 01:54:14] 2025-10-12 05:54:12,441 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 01:54:14] 2025-10-12 05:54:12,441 | INFO     | traces error code: 0
[2025-10-12 01:54:14] 2025-10-12 05:54:12,441 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 01:54:14] 2025-10-12 05:54:12,769 [wrapper] ==== pilot stdout END ====
[2025-10-12 01:54:14] 2025-10-12 05:54:12,783 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 01:54:14] 2025-10-12 05:54:12,797 [wrapper] pilotpid: 3557587
[2025-10-12 01:54:14] 2025-10-12 05:54:12,821 [wrapper] Pilot exit status: 0
[2025-10-12 01:54:14] 2025-10-12 05:54:12,911 [wrapper] pandaids: 6838603249
[2025-10-12 01:54:14] 2025-10-12 05:54:13,143 [wrapper] cleanup supervisor_pilot   27122 3557588
[2025-10-12 01:54:14] 2025-10-12 05:54:13,180 [wrapper] Test setup, not cleaning
[2025-10-12 01:54:14] 2025-10-12 05:54:13,204 [wrapper] apfmon messages muted
[2025-10-12 01:54:14] 2025-10-12 05:54:13,239 [wrapper] ==== wrapper stdout END ====
[2025-10-12 01:54:14] 2025-10-12 05:54:13,266 [wrapper] ==== wrapper stderr END ====
[2025-10-12 01:54:14]  *** Error codes and diagnostics ***
[2025-10-12 01:54:14]     "exeErrorCode": 0,
[2025-10-12 01:54:14]     "exeErrorDiag": "",
[2025-10-12 01:54:14]     "pilotErrorCode": 0,
[2025-10-12 01:54:14]     "pilotErrorDiag": "",
[2025-10-12 01:54:14]  *** Listing of results directory ***
[2025-10-12 01:54:14] total 414712
[2025-10-12 01:54:14] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 11:05 queuedata.json
[2025-10-12 01:54:14] -rwx------. 1 boincer umatlas     36292 Oct 11 11:05 runpilot2-wrapper.sh
[2025-10-12 01:54:14] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 11:05 pilot3.tar.gz
[2025-10-12 01:54:14] -rw-r--r--. 1 boincer umatlas       100 Oct 11 23:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 01:54:14] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 23:38 run_atlas
[2025-10-12 01:54:14] -rw-r--r--. 1 boincer umatlas       105 Oct 11 23:38 job.xml
[2025-10-12 01:54:14] -rw-r--r--. 2 boincer umatlas 221893131 Oct 11 23:38 EVNT.46676267._002393.pool.root.1
[2025-10-12 01:54:14] -rw-r--r--. 2 boincer umatlas    569673 Oct 11 23:38 input.tar.gz
[2025-10-12 01:54:14] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 23:38 start_atlas.sh
[2025-10-12 01:54:14] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 23:38 shared
[2025-10-12 01:54:14] -rw-r--r--. 1 boincer umatlas         0 Oct 11 23:38 boinc_lockfile
[2025-10-12 01:54:14] -rw-r--r--. 1 boincer umatlas      2550 Oct 11 23:38 pandaJob.out
[2025-10-12 01:54:14] -rw-------. 1 boincer umatlas    975512 Oct 11 23:38 agis_schedconf.cvmfs.json
[2025-10-12 01:54:14] -rw-------. 1 boincer umatlas   1560580 Oct 11 23:38 agis_ddmendpoints.agis.ALL.json
[2025-10-12 01:54:14] drwx------. 5 boincer umatlas      4096 Oct 11 23:38 pilot3
[2025-10-12 01:54:14] -rw-r--r--. 1 boincer umatlas      7174 Oct 12 01:47 init_data.xml
[2025-10-12 01:54:14] -rw-------. 1 boincer umatlas 196038004 Oct 12 01:51 HITS.46676269._059967.pool.root.1
[2025-10-12 01:54:14] -rw-r--r--. 1 boincer umatlas       530 Oct 12 01:51 boinc_task_state.xml
[2025-10-12 01:54:14] -rw-------. 1 boincer umatlas      1051 Oct 12 01:52 memory_monitor_summary.json
[2025-10-12 01:54:14] -rw-------. 1 boincer umatlas    402515 Oct 12 01:52 log.46676269._059967.job.log.tgz.1
[2025-10-12 01:54:14] -rw-------. 1 boincer umatlas      7820 Oct 12 01:53 heartbeat.json
[2025-10-12 01:54:14] -rw-------. 1 boincer umatlas        95 Oct 12 01:53 pilot_heartbeat.json
[2025-10-12 01:54:14] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 01:54 boinc_mmap_file
[2025-10-12 01:54:14] -rw-r--r--. 1 boincer umatlas        27 Oct 12 01:54 wrapper_checkpoint.txt
[2025-10-12 01:54:14] -rw-------. 1 boincer umatlas      4825 Oct 12 01:54 pilotlog.txt
[2025-10-12 01:54:14] -rw-------. 1 boincer umatlas   1008921 Oct 12 01:54 log.46676269._059967.job.log.1
[2025-10-12 01:54:14] -rw-------. 1 boincer umatlas       357 Oct 12 01:54 output.list
[2025-10-12 01:54:14] -rw-r--r--. 1 boincer umatlas       620 Oct 12 01:54 runtime_log
[2025-10-12 01:54:14] -rw-------. 1 boincer umatlas   1433600 Oct 12 01:54 result.tar.gz
[2025-10-12 01:54:14] -rw-------. 1 boincer umatlas       657 Oct 12 01:54 z9eLDm2KqR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmm7RMDmYTsy1n.diag
[2025-10-12 01:54:14] -rw-r--r--. 1 boincer umatlas      8705 Oct 12 01:54 runtime_log.err
[2025-10-12 01:54:14] -rw-r--r--. 1 boincer umatlas     20980 Oct 12 01:54 stderr.txt
[2025-10-12 01:54:14] HITS file was successfully produced:
[2025-10-12 01:54:14] -rw-------. 1 boincer umatlas 196038004 Oct 12 01:51 shared/HITS.pool.root.1
[2025-10-12 01:54:14]  *** Contents of shared directory: ***
[2025-10-12 01:54:14] total 410124
[2025-10-12 01:54:14] -rw-r--r--. 2 boincer umatlas 221893131 Oct 11 23:38 ATLAS.root_0
[2025-10-12 01:54:14] -rw-r--r--. 2 boincer umatlas    569673 Oct 11 23:38 input.tar.gz
[2025-10-12 01:54:14] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 23:38 start_atlas.sh
[2025-10-12 01:54:14] -rw-------. 1 boincer umatlas 196038004 Oct 12 01:51 HITS.pool.root.1
[2025-10-12 01:54:14] -rw-------. 1 boincer umatlas   1433600 Oct 12 01:54 result.tar.gz
01:54:15 (3550111): run_atlas exited; CPU time 24375.141794
01:54:15 (3550111): called boinc_finish(0)

</stderr_txt>
]]>

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